Spo09176.1 (mRNA) | SpinachBase

Overview


Name	Spo09176.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Transducin/WD40 repeat-like superfamily protein
Location	SpoScf_01706 : 23749 .. 32836 (+)
Sequence length	1582

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAAGACGAAAACTGTTTTAAGAGCTACTAACTAGTGAGCATAATTAGTGAAAGAAATTTCTGAATTCTTTTTGCATTTGTCATTCAACCAAATATCACTTTATTACTAAAATCATAATTTTCAAACGTCTATAAATTATAATATTGATGCCTTAATTAGGGAACAAGGGCGATAAGTCGATAACGGACTACGGTTTGTAGACAGCTCGAATTAAACGGGTTACTAGTTGAAATAATTCGGACTATAAGCGTTTTGGGTTGAAGCAGTTCGGATTGAAGCTAATCCAGTCATTAACGGGTTTTAGATCCATTCGATTTAGGTTTGAAACGGATCGGATTACTGCGTAACGGTTTGTTATCGGGTTTCTTCCTAGCTCTCCCAAGCTTCAATTTCGTGATTCCCTCCTATAGTTTATTCCACTCGCTCTCTCTTATCAGTCTTTAGAACTCATACCTCGCACCTCCCATCAAAGTAAAAATCGTTCAATTCACAAGCAATTTCAGGTTCATTTTCTGTTTTTTCCCTTTCTACTATTTTTTTTAAATTTTTTTTTGGTTCTGGGGTTTTCATTTCTTCTTCTGGGTACTTCTTATTTGTTCCAAAATCTAACAATATGTAATGAACTGTATAATTTCTGTTCTGGGTATGAAAAAATAGTGGGAACTTATTCTAATGGCGGAGCAGAAAACTGAGGAAGCAACACACCCATTTAAGAATCTATGCAGCAGAGAATACCAGGGTCACAAAAAGAAGGTATTTGATTTTTAGCCCTTTTTTATTTTGATTTCTTTGATGCCTTTTCATTAGAGTTTAATCTTTGTTTTGTCCAATTTCCCACAAATATTTCAACCAATGTACTGTAAACAGGTGCATTCAGTGGCTTGGAATTGTACGGGGACGAAGCTCGCTTCAGGATCGGTTGATCAAACGGCTCGAGTTTGGCACATTGAACCTCATAGTCATGTAAGCTTTAATTCTATCTACTCTACAATCATCTTATTTGATATTTGTGGATTCTTGCTGGAATTGATTGGAACTGTTTTGTGTGGTTTATTAATTAGTTTTGAGATGTAATTGGTTGGAGATTAGAATGCATATGTTCCCCAAATGGGCAGATCAATCGCTGGTGTTTGTGTTTGTTGAATTGGATTTTCAAACTGATCTTCTTTTAGGTCTAAGTTGTGTAGATAGCAAAGGAATGCCTAGTTTCCCAGCTGAGGAGGGAAACGGTTCAATTAGAAATGAATGTTTGAATTTGACTAGTTGTAGTTTAATGTTGTTGCTCAAGCTGCTAGTGTCGAAAATTCGTTCGTTGAAACTCTCTTTCAGCTAATTGAGAGTAGAATAAGTATTAATAAACTGTGGCTTATGATACAATCTTATGCACTTTAGTTTGTGAGATGATAAGTGTACTTTCCTTTATCATTTCCTCAATGTTCTCGTAGTGTCAATGTCTACACAAAGCAAAGCAGCTATTAGATCTATGGGTTAGGGAGACCTGATGGAATATTGTGTGAATATTGTATTGTGTGTAGTTTATTCTAGTTTCAGAACATCCAAATTTATGGATACAATTGTCAAGTATTATCCTCCAATACTCTTCTTACCAGTGTTGTGTTTTAGTTACAGGTTTATAGCTTAAGCTAACCCAGTGATATTCTAAGACAGATTTGTTAGCTTCAGATTCTTTTACCTTGAAACGTGCTATAAGTTTATGGTTTCTAGAAAGAGGACATTAAGAAAATTGAGGTTTCTCATTTCCATTTGACAATAGGAGAGTATGGCTGTATGGAAGCTGTTGAGGAAGGCTGTAATAGGCTGGAAATTCAGAAATGTGAAAAGGAGGAAATAGAAGAGAATATAGGTTTGGTAGATGATTGCAATGTTGCGCAATTATATCATCAATAATGGTGTGTTTATAATCCAAGCTTTGAAGTTGCTGGACACTGACAAAAGATAAGAAAAAAAACAAGTGAAATAAAACTCACCAACTTTCATCATGGTTTCTTTCTTCATAAACTCCTTTATTTATAGACTAGCTAATATGGATACCCCTCTTCTTGTTGCTCAAGCTACCTCTAAATTAATTATAATGGCACATTCCTAATATGCCCTTCCGTTATACCCGCTGCATCACAAAGGCATTGTGATATCCTAAGGTTTCAGGCAGTCATACATCTGAGATTAAGGTCCTCAATTCCGAACTATTGGCAGCTGGGAAGAAGACTGGAGGGTGGTTCAACTACTGTATGATTTCCATCACGGATGTAGTTATGAACTTATGATATCCCCCCATCTTATTAATCCAGATACAAAGTACTTCAATCTTTACCTAGACAATCCAACCACCATCATGGATTGTGCCTGGAAAGATGTAGTTTTCCCATTAGTTAAGTACTCAACTAACACTTAGATTATGGCTTTGTTTGTCACTACTTGGCTTTGCCTTACCTAGCTTAAAGTTAAAAGGCCACTTGAAAGATCCCAGAAAAGCTGCTAGCTAAAAGTCTGGCATTACCAGTTCTTAACTTTTGTTCACGTGCTCTTGGCCAGCTTGTGTCATTGTGAGATTCATGGTTTTCCTATTAAATATTTTTGGGTTCCATTAGGGAGTAATCCTAAGATGGTTTTTTCCTGGAATTTGGTGATTGAGGTTGGATAGGTTTTGGGGGGGGGGGGGGGNTTTTTCTCTCTTTTTTTTTGTTATCCTCATTTTATTCCCCTTGTAAAAATAGGTTCAAGACTTTCAACTAATCACAAAAAAAAAATTAAATTTTGCCGCCCTTATGTGATCTAAATGGTCAAAACATGTATTGCAAATAGTCGAAATGTAAAAGCCAAATCTGGACGGAGGGATTACCTGTTTTGATATCACATGTCTATTGTAATGTGCTTGGATTTCTGTAGTCCTATTTAATAGATGACATAAAAACTTGGTTTTTTGAGTTTCTAACGAAATCTTCATTTACTGCATGTTCTTCAATGAGGTAAGGTTTATGGTCCACGAAACCATGTCGATAATCTTGATATAGAAAAATTAATTACCTAGCTTGTACAGTTTTATATTAATTACAAAAATATGTCAAGTGCTATCACATCTGAATTAAATCTCTTATTGTATTCTTAGGTTTGTGCTAATGAGTGTTTCTTGGTTTAATACCCATTATCCTTTGGAATATCTGCTGCAGGGCAAGGCAAAAGATACTGAATTTAAGGGGCACACTGATAGTGTGGACCAGCTCTGTTGGGATCCCAAACACGCAGATCTACTTGCAACAGCATCAGGGGATAAAACAGTTCGTTTGTGGGATGTTCGTAGTAAGTCAAGATGAATCTCGATGCTTACAGTGCGGAAAAAGTAATAAGTTATATATGGCATGAAGTCCCTCACTGTCTCATTTATAACTATTTTTCATCATGAAAATTTTCCTTCTCAGTTTCACGACTCTCACCCAATGCCACTCATGATGAATGTCTATCTGTCTTTGATTATCTCAATGATGTTAAATTGTTAATGACTTCTCTATGCAGACACTTTCAACAGAGTTGAAAGATCAGTGGCAGACAATTTTGTGCCTTTTGGTTAAAATGGCCTAAATCACCAGACAATTTTTATTAATTGAGAAAATATTACAATCCATGTGTTTTCAGTGTTAGATGATAGAGTACCTATCCAAGAATGGAAACGCCAATACTGCCAATTCAATTCCAATTTTTTTTCATATAACATTGTGTAGACAGTATATAGCAGCAAGTTGGTCTTATTTCCTAATAGAACCAAAACTCTCCTAATAATTGCAATAAAGTTCTATGACCTGTTGAGGCTGCTAGCCTAATCAAGTTACCCCTATGTATACCTAATAAATAGAAGAAGTGTCCAAGGTTCTCTCACAATCGCATCCCTGAACTATTCGGTGCAATTGATTTAAATTCCAATTACGTCCCTTTCTTATCATCTGGGCCTTTTGGGGGAAGACAGTAAGACTATGTACGTGCATTATGACCGTCCTAGACCTTGTCATGGCCAGAACCTTGTCACTTTCTGATGTTTGTTCTTGTATCCTATCATTGCATCTCCAGCAAAACAAAGCCAAAATGATCAAACTACAGGTGGATCAAAACTTGCCTTTCAATACTTCCTATCCTCCCCCTCTTATTACTGATATATTATTGATTTTTTGTTGAAATTACTTTTTTCTTTGACAAATTTGGGCTTTTCTTTTGCGCAGCCCGCTATTACTATCACTGTTATTATTACTTCCCTACTACCTAATTACATTTAAAGAATGCTTTACTACTTCCGCTACTCCTGAAATATTACATTCTATTCCTATATACTGTCCGAGAAAATTATTACAGCGAATTCCTAGAGGAAAACCTCGTTGCCACCCTTTATTTTTAGTGCAAGAGTGTGTTCATCCTGATTTCCTGAACACTGCCGGCTGTGGGATTCGCAGTTTCACACTAGGTGATAATGAATGTGATGGTCTTACTGTGAATCTGCATGGAAACAGATTGATATTCCCTTATTAGCACCATCTACCCTTCTTCATCCATTTAACTAATCAGGGGATGATTCTGCATTTATTGGCAGGCCAAAATCTAGACCCATATGGGCTGTTTGCTTCTTCTACTTTTTTTTTCTTTTATCTTTAATTCCCTGTTGAATAACCACCAAATCTTACATTCCTCTTGAAAATAATACTTGGAGATTGTATAGCTGAACTCGTTTAAAGTAAAGATAAAATATGAGAACAGTGAATCATTCAAGTTTGCTTGGAAGCAGATATTCTTATAATTCCATTAGTTGATTGGGATGAGACTCTTTATCATGTTTGCTTTTGTGCTGTATAGGTGGGAAGTGCACACAGCAAGCAGAACTTAGTGGTGAAAATATCAACATTACATATAAACCTGATGGGGCACACATTGCTGTTGGAAACAGGGTATAATTTGCAATTTTCATGCTCGTTCTTGCTAAGGTCTTACTAAGTTTTTAGCCTTTTCTCTTTGTGCTCACTTTTAAATTGAATTTCACTTAATTCATGATTGGCACTTTTGGCAGCATATCTGCTTGGTGGCAGCAACATTTTGTGCTTGTTGTTGGATGATGCCTTTTCACACCTGACTTAGGTTCTGAGATGTTTAGCTCATTTTAACTCTATAAATGTTTCCTTCTTGTAGGATGATGAACTAACAATTCTGGATGTTAGAAAATTTAAGCCGATTCACAGGCGCAAGTTCAATTATGAGGTGAGTTCCGTTCTTCTTACTGCCAGTTCGTCTCTGTGCTCTTTATTTTCTAATGAATGTTTTGAATCATTGCTCGGTGATTCATGGGGATATGTGATTGGCTCATGGTTAAGTACTCGAAACACTTAGATATGGCTCTGTTTGGCATAGCTAGCTGAAAGTAAAAAGGCAAGTTGAAAGCTAAATAGTTAGTTTATTGCAGAGAAGCTGCTAGCTAAAAGCCTAAAAGGTTGAAAAGGTCACAGGGTTTAAGGAAGTTCACCCATTGCCTCCTTTTTCTATGATGTTACTCGGACTCTTCATTCACCTCAAGTACCCATGTCGGATCCTCGACACCCAGACATGGGTATACCCAGTGACTCAGTCGGTTAGAATACGGGTTGGTGTTTTTCACCACTGGTGTTTTTCAGGATGGACCCGCTATGAACCTGACCCCCCACCCCCCCCAAAACAATAGAAATTTTTTAGCGTGCAACTATGCATGGCGTTGTTTTCGTAATGTCCATGCATATATTTGTTTGAATTAACATGAAAGGTTCACCCTTTTTGGGGTATTATTTGCGAAAGAACTTCAATACTCAGTTGATTTTCACAATCCTCCCACAGAGAGAAATGATGGAAACTATCCTCTCGACTCTCAAGTTTTAAATAGTGGAGAGTAAAAGTCAATTAGGCAAGTGTAAAAATCAGCTCCAACATAGTTGTTCAATCACATAGTTGATCACAATGTTAACTTTTATCCAGGTAAATGAGATTGCATGGGACATGACTGGAGAGAAGTTCTTTCTGACAACTGGAAATGGTGAGATTAGTTTGTTTTATGTGGAATGTTTTTAAGTTTGCTGGTGTAGAATGGAAATGTCAATATCATTCATGTTTTTGCACATATAGGTACTGTCGAAGTCCTTGCATACCCCTCGTTGAAGGCACTTGACACCCTTACCGCTCACACTGCTGGTTGTTATTGCATTGCAATTGATCCACTAGGAAGGTATCCTGAATTCCGTCTGAGTTTATTCATCCAGCATATTTATGTCTTTCACTTTCCATTGCTAGAAGATACGCAGAAACAGAAATTGATTTCTTGCTAAATCACTCAGCTCAAATGTGCGTGCTTTCCCTTTGCTTTCATTTTCTGTCCCTGACATTAGATCTGCAATATGGCTTTGGTCATTATTTTTGTGTGGACTGTGATAATAAATTAATAACGGTTTTGGCAACACTACTCGGTATTTCCTCATGATTATGTGCCTATGTGGTGCTATTGCTATCCTTGAACTAGTGGTCATCATCTCCATTTTGCTCCTAATATTGATGCATGTAGAGGTTTTATGTAACTCTTCTTGGTCTTCTGGTCAGCGATTACAAAAAATCATATCATTCATGTTTAATTGCAGCTTAAAAATTCTGCCCGTTAGGTCGGGTCGGATCAAACTTCGGCCCATTTTTGGGCCGGGGCAAATTTATGACTAAAATTTCAATTTTGAGTTGCCCAAAACCCGCCCCTAAAATATAAAATCGCACCGGGACCGAAAAACGGGCCTAAAGATTCTGCCCAAACTCGCTATTTTTCGGGCCGGACATGGCTTATGATGATCAGGTCTAGATGTCACAGACAAAAATTTAAATACTTCGTACAAGCATTACATTTTTCTTAAATAAAAATTATAAGCTAACTAACAGGCATCACCAGTTTCACCATCATTCTCATAATTGAAATTTAACATGCACATACTCAATAACACCTAAAATCTATAGGTCTTTTCATGTTCGGACAATAATGGAATGAATAAAAATTACTCAATATACCTGCATGTGCTTCTTATTCCTCCTGATTATGTGGCTATGTGGTGCTATTGCTATCCTGGAAGTAGTGTTATATTGGTAGCCATAGTGGTCATCATCTCCATTTTGCTCCTAATTGATTCACTATTGATGCATATGTACCTCTTCTTTGTCTACTGGTCAGCAACTACAAAGAAGCACATCATTCATGTTTAATTGCAGCCTTTTCCACGTAGTAAATCAGAACAACTCTTGTTAATACATGTGGGGTTGATGGCAGATATTTTGCTGTTGGAAGCGCCGACTCGTTGGTCAGTCTTTGGGACATTAAAGAGATGCTATGTGTACGAACGTTTGTGAAACTCGAGTAAGATTGACTTGGATTTATCTTGATGTTTATATTTTTGGTGTTTCTCCGTTAGTCCTGTAACCTTTTTGATAACATCAGATGGCCTGTCCGAACAATAAGTTTCAATCACACTGGAGAGTATATTGCTTCAGCCAGTGAAGATTTATTTATTGATATAGTAAGTCCCCTAACTGAATATTCTTTTGCTCTTTTGCTTACATTTGAAACAAAACCTTACAAACCTACTCTGCAGTTCGGTATATAAGGGTGCGTTTTCTTCACCTGATTTTCACTTATTTTTTTTCTGAACTTACCTGAACTTATATGAATTTATCTGAACTTATCAAAACTTATTTTAGTTATAAATTGTATTTGGTCAACTCTTTATTTTTCCAAAATAAGTGGAAATAAGGTAAACAGAACAGAACCTAACTCCTTGTCGTCAAACTAGCATTAAAAACCCCGTGATAACATTCACTGGATAATATGAATAGAGTTGCTTATGAAGAGCAGTCCTGTCCTGATTATAGGAAATCTTTGGTCTGATTGATCTGACATGAGTAACATTTTTCAGTCAAGTATTGAAACTGGACGATCCACCCACCAAATACCTTGTCGGGCAGCAATGAATAGTGTTGAATGGAATCCCAAGTCCAACTTGCTTGCATATGCTGGAGATGACAAAAACAAATACCAAACAGATGAAGGTGATAAGATTTCTGTCACTTGCACTTGAATTTGGTCATTTATTTATAGAATAATTGGTGCACTTTCCATAATCGGTCGTACTTTATTAATTGGTGCACTTTCCATTTATGGAAATTTCCCCTTATTTTATAATTTTCTTCTTATCCCAGGACCCCACTAGTAATATTTTATCATTTATTCCTTGTCTTTTCTTTCGTTTAAATACTTTAGTACCTCCACTATCTTTTATTACAATTGTTTATCTCCGTTTACCCCACTTATATTTTATTTTAATAAAATCAACTCACATTCATTAAACTCTGAGTCAAAGTGCACCAATTAAATTCTATACGGAGGGAGTATTTATGTAGCTTAATTTCTTTTGTTAGGACAATCTTTGAACACCCTTTTTTTAATTGAATTGTTGCAGGTGTTTTCCGCATATTTGGTTTCCAGAGTGCTTAGTGTTTTGCAGATACGAGACACTGTTAGTTCATCAATCAAGTAATGTATTGACTACCAAAGTTGTCTAGGATTATATGAAAAGATAAAACAGGAGCTGTCGACGTGGTGGTCTGAGATCTTGCGGTAGAGGTGGCAAATGGATACTCGGTCAGAGTAAGGTCGTATACAGTTATAATTCTGTTTTTCAGGTCTGGTTCATTGTGGAATGTATCAACTATGAGTAGTTTATTTTATGATCAATCAATTTTAGTTGTTCTATTAGTTCCTGTATTGAATAATACTTAGTACTATATACAACATAGGAAAATTTGGTAATATTAATCCAACCTTTGGCCGATTTTCTTTTATTAAGTCCACCTACGACATATTTTTTAATAATCCCACCTTTACTACCCAACGACTTTTATTGGGCCTAACAGGTAATAAACTTGTTGTAGACGGTAATATGTCTCTACGTGGAAGTACCCTCTCTCGATATATTCAGTCATTATCATCAATTCATCACCATCTCGTTTACTTTTTCACCGATTTTCGATCACTTAAG

mRNA sequence

ATGAAACTCATACCTCGCACCTCCCATCAAAGTAAAAATCGTTCAATTCACAAGCAATTTCAGTGGGAACTTATTCTAATGGCGGAGCAGAAAACTGAGGAAGCAACACACCCATTTAAGAATCTATGCAGCAGAGAATACCAGGGTCACAAAAAGAAGGTGCATTCAGTGGCTTGGAATTGTACGGGGACGAAGCTCGCTTCAGGATCGGTTGATCAAACGGCTCGAGTTTGGCACATTGAACCTCATAGTCATGGCAAGGCAAAAGATACTGAATTTAAGGGGCACACTGATAGTGTGGACCAGCTCTGTTGGGATCCCAAACACGCAGATCTACTTGCAACAGCATCAGGGGATAAAACAGTTCGTTTGTGGGATGTTCGTAGTGGGAAGTGCACACAGCAAGCAGAACTTAGTGGTGAAAATATCAACATTACATATAAACCTGATGGGGCACACATTGCTGTTGGAAACAGGGATGATGAACTAACAATTCTGGATGTTAGAAAATTTAAGCCGATTCACAGGCGCAAGTTCAATTATGAGGTAAATGAGATTGCATGGGACATGACTGGAGAGAAGTTCTTTCTGACAACTGGAAATGGTACTGTCGAAGTCCTTGCATACCCCTCGTTGAAGGCACTTGACACCCTTACCGCTCACACTGCTGGTTGTTATTGCATTGCAATTGATCCACTAGGAAGATATTTTGCTGTTGGAAGCGCCGACTCGTTGGTCAGTCTTTGGGACATTAAAGAGATGCTATGTGTACGAACGTTTGTGAAACTCGAATGGCCTGTCCGAACAATAAGTTTCAATCACACTGGAGAGTATATTGCTTCAGCCAGTGAAGATTTATTTATTGATATATCAAGTATTGAAACTGGACGATCCACCCACCAAATACCTTGTCGGGCAGCAATGAATAGTGTTGAATGGAATCCCAAGTCCAACTTGCTTGCATATGCTGGAGATGACAAAAACAAATACCAAACAGATGAAGGTGTTTTCCGCATATTTGGTTTCCAGAGTGCTTAGTGTTTTGCAGATACGAGACACTGTTAGTTCATCAATCAAGTAATGTATTGACTACCAAAGTTGTCTAGGATTATATGAAAAGATAAAACAGGAGCTGTCGACGTGGTGGTCTGAGATCTTGCGGTAGAGGTGGCAAATGGATACTCGGTCAGAGTAAGGTCGTATACAGTTATAATTCTGTTTTTCAGGTCTGGTTCATTGTGGAATGTATCAACTATGAGTAGTTTATTTTATGATCAATCAATTTTAGTTGTTCTATTAGTTCCTGTATTGAATAATACTTAGTACTATATACAACATAGGAAAATTTGGTAATATTAATCCAACCTTTGGCCGATTTTCTTTTATTAAGTCCACCTACGACATATTTTTTAATAATCCCACCTTTACTACCCAACGACTTTTATTGGGCCTAACAGGTAATAAACTTGTTGTAGACGGTAATATGTCTCTACGTGGAAGTACCCTCTCTCGATATATTCAGTCATTATCATCAATTCATCACCATCTCGTTTACTTTTTCACCGATTTTCGATCACTTAAG

Coding sequence (CDS)

ATGAAACTCATACCTCGCACCTCCCATCAAAGTAAAAATCGTTCAATTCACAAGCAATTTCAGTGGGAACTTATTCTAATGGCGGAGCAGAAAACTGAGGAAGCAACACACCCATTTAAGAATCTATGCAGCAGAGAATACCAGGGTCACAAAAAGAAGGTGCATTCAGTGGCTTGGAATTGTACGGGGACGAAGCTCGCTTCAGGATCGGTTGATCAAACGGCTCGAGTTTGGCACATTGAACCTCATAGTCATGGCAAGGCAAAAGATACTGAATTTAAGGGGCACACTGATAGTGTGGACCAGCTCTGTTGGGATCCCAAACACGCAGATCTACTTGCAACAGCATCAGGGGATAAAACAGTTCGTTTGTGGGATGTTCGTAGTGGGAAGTGCACACAGCAAGCAGAACTTAGTGGTGAAAATATCAACATTACATATAAACCTGATGGGGCACACATTGCTGTTGGAAACAGGGATGATGAACTAACAATTCTGGATGTTAGAAAATTTAAGCCGATTCACAGGCGCAAGTTCAATTATGAGGTAAATGAGATTGCATGGGACATGACTGGAGAGAAGTTCTTTCTGACAACTGGAAATGGTACTGTCGAAGTCCTTGCATACCCCTCGTTGAAGGCACTTGACACCCTTACCGCTCACACTGCTGGTTGTTATTGCATTGCAATTGATCCACTAGGAAGATATTTTGCTGTTGGAAGCGCCGACTCGTTGGTCAGTCTTTGGGACATTAAAGAGATGCTATGTGTACGAACGTTTGTGAAACTCGAATGGCCTGTCCGAACAATAAGTTTCAATCACACTGGAGAGTATATTGCTTCAGCCAGTGAAGATTTATTTATTGATATATCAAGTATTGAAACTGGACGATCCACCCACCAAATACCTTGTCGGGCAGCAATGAATAGTGTTGAATGGAATCCCAAGTCCAACTTGCTTGCATATGCTGGAGATGACAAAAACAAATACCAAACAGATGAAGGTGTTTTCCGCATATTTGGTTTCCAGAGTGCTTAG

Protein sequence

MKLIPRTSHQSKNRSIHKQFQWELILMAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKNKYQTDEGVFRIFGFQSA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo09176	Spo09176	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo09176.1	Spo09176.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09176.1.exon.1	Spo09176.1.exon.1	exon
Spo09176.1.exon.2	Spo09176.1.exon.2	exon
Spo09176.1.exon.3	Spo09176.1.exon.3	exon
Spo09176.1.exon.4	Spo09176.1.exon.4	exon
Spo09176.1.exon.5	Spo09176.1.exon.5	exon
Spo09176.1.exon.6	Spo09176.1.exon.6	exon
Spo09176.1.exon.7	Spo09176.1.exon.7	exon
Spo09176.1.exon.8	Spo09176.1.exon.8	exon
Spo09176.1.exon.9	Spo09176.1.exon.9	exon
Spo09176.1.exon.10	Spo09176.1.exon.10	exon
Spo09176.1.exon.11	Spo09176.1.exon.11	exon
Spo09176.1.exon.12	Spo09176.1.exon.12	exon
Spo09176.1.exon.13	Spo09176.1.exon.13	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09176.1.CDS.1	Spo09176.1.CDS.1	CDS
Spo09176.1.CDS.2	Spo09176.1.CDS.2	CDS
Spo09176.1.CDS.3	Spo09176.1.CDS.3	CDS
Spo09176.1.CDS.4	Spo09176.1.CDS.4	CDS
Spo09176.1.CDS.5	Spo09176.1.CDS.5	CDS
Spo09176.1.CDS.6	Spo09176.1.CDS.6	CDS
Spo09176.1.CDS.7	Spo09176.1.CDS.7	CDS
Spo09176.1.CDS.8	Spo09176.1.CDS.8	CDS
Spo09176.1.CDS.9	Spo09176.1.CDS.9	CDS
Spo09176.1.CDS.10	Spo09176.1.CDS.10	CDS
Spo09176.1.CDS.11	Spo09176.1.CDS.11	CDS
Spo09176.1.CDS.12	Spo09176.1.CDS.12	CDS
Spo09176.1.CDS.13	Spo09176.1.CDS.13	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09176.1.utr3p.1	Spo09176.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo09176.1 vs. NCBI nr
Match: gi|902225892|gb|KNA20224.1| (hypothetical protein SOVF_054440 [Spinacia oleracea])

HSP 1 Score: 668.7 bits (1724), Expect = 5.500e-189
Identity = 318/319 (99.69%), Postives = 319/319 (100.00%), Query Frame = 1


		  
Query: 27  MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG 86
           MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG
Sbjct: 1   MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG 60

Query: 87  KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT 146
           KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT
Sbjct: 61  KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT 120

Query: 147 YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV 206
           YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV
Sbjct: 121 YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV 180

Query: 207 LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP 266
           LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP
Sbjct: 181 LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP 240

Query: 267 VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD 326
           VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD
Sbjct: 241 VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD 300

Query: 327 KNKYQTDEGVFRIFGFQSA 346
           KNKYQTDEGVFRIFGFQ+A
Sbjct: 301 KNKYQTDEGVFRIFGFQNA 319

[Close]

BLAST of Spo09176.1 vs. NCBI nr
Match: gi|731345475|ref|XP_010683937.1| (PREDICTED: THO complex subunit 3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 638.6 bits (1646), Expect = 6.100e-180
Identity = 302/319 (94.67%), Postives = 308/319 (96.55%), Query Frame = 1


		  
Query: 27  MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG 86
           MA+QK EEAT PFKNL SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPH HG
Sbjct: 1   MADQKAEEATIPFKNLYSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHG 60

Query: 87  KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT 146
           K KD EFKGHTDSVDQLCWDPKH D+LATASGDKTVRLWD RSGKC+QQAELSGENINIT
Sbjct: 61  KVKDIEFKGHTDSVDQLCWDPKHGDVLATASGDKTVRLWDARSGKCSQQAELSGENINIT 120

Query: 147 YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV 206
           YKPDG HIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTG+KFFLTTGNGTVEV
Sbjct: 121 YKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGDKFFLTTGNGTVEV 180

Query: 207 LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP 266
           LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP
Sbjct: 181 LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP 240

Query: 267 VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD 326
           VRTISFNHTGEYIASASEDLFIDIS++ETGRS HQIPCRAAMNSVEWNPKSNLLAYAGDD
Sbjct: 241 VRTISFNHTGEYIASASEDLFIDISNVETGRSIHQIPCRAAMNSVEWNPKSNLLAYAGDD 300

Query: 327 KNKYQTDEGVFRIFGFQSA 346
           KNKYQ DEGVFRIFGFQSA
Sbjct: 301 KNKYQADEGVFRIFGFQSA 319

[Close]

BLAST of Spo09176.1 vs. NCBI nr
Match: gi|747099304|ref|XP_011097701.1| (PREDICTED: THO complex subunit 3 [Sesamum indicum])

HSP 1 Score: 603.2 bits (1554), Expect = 2.800e-169
Identity = 282/312 (90.38%), Postives = 295/312 (94.55%), Query Frame = 1


		  
Query: 34  EATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEF 93
           E T PFK L SREYQGHKKKVHSVAWNCTGTKLASGSVDQTAR+W IEPHSHGK KD E 
Sbjct: 2   EETIPFKTLHSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARIWQIEPHSHGKVKDIEL 61

Query: 94  KGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGAH 153
           KGHTDSVDQLCWDPKHADL+ATASGDKTVRLWD RSGKC+QQAELSGENINITYKPDG H
Sbjct: 62  KGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTH 121

Query: 154 IAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLK 213
           IAVGNRDDELTILDVRKFKPIH+RKFNYEVNEIAW+MTG+ FFLTTGNGTVEVLAYPSL+
Sbjct: 122 IAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGDMFFLTTGNGTVEVLAYPSLR 181

Query: 214 ALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFN 273
           A+DTL AHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIK+MLCVRTF KLEWPVRTISFN
Sbjct: 182 AVDTLMAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKDMLCVRTFTKLEWPVRTISFN 241

Query: 274 HTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKNKYQTD 333
           HTGEYIASASEDLFIDI++++TGRS HQIPCRAAMNSVEWNPK NLLAYAGDDKNKYQ D
Sbjct: 242 HTGEYIASASEDLFIDIANVQTGRSVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQAD 301

Query: 334 EGVFRIFGFQSA 346
           EGVFRIFGF SA
Sbjct: 302 EGVFRIFGFDSA 313

[Close]

BLAST of Spo09176.1 vs. NCBI nr
Match: gi|1009107710|ref|XP_015881111.1| (PREDICTED: THO complex subunit 3 [Ziziphus jujuba])

HSP 1 Score: 603.2 bits (1554), Expect = 2.800e-169
Identity = 282/312 (90.38%), Postives = 294/312 (94.23%), Query Frame = 1


		  
Query: 34  EATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEF 93
           E T PFKNL SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIE H HGK KD E 
Sbjct: 2   EETIPFKNLQSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIETHGHGKVKDIEL 61

Query: 94  KGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGAH 153
           KGHTDSVDQLCWDPKHADL+ATASGDKTVRLWD RSGKCTQQAELSGENINITYKPDG H
Sbjct: 62  KGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCTQQAELSGENINITYKPDGIH 121

Query: 154 IAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLK 213
           IAVGNRDDELTILDVRKFKPIH+RKFNYEVNEIAW+MTG+KFFLTTGNGTVEVLAYPSL+
Sbjct: 122 IAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGDKFFLTTGNGTVEVLAYPSLR 181

Query: 214 ALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFN 273
            LDTL AHTAGCYCIAIDP+GRYFAVGSADSLVSLWDI EMLCVRTF KLEWPVRTISFN
Sbjct: 182 PLDTLMAHTAGCYCIAIDPIGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFN 241

Query: 274 HTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKNKYQTD 333
           HTG+YIASASEDLFIDI++++TGR+ HQIPCRAAMNSVEWNPK NLLAYAGDDKNKYQ D
Sbjct: 242 HTGDYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQAD 301

Query: 334 EGVFRIFGFQSA 346
           EGVFRIFGF SA
Sbjct: 302 EGVFRIFGFDSA 313

[Close]

BLAST of Spo09176.1 vs. NCBI nr
Match: gi|694408961|ref|XP_009379130.1| (PREDICTED: THO complex subunit 3 [Pyrus x bretschneideri])

HSP 1 Score: 600.9 bits (1548), Expect = 1.400e-168
Identity = 284/315 (90.16%), Postives = 295/315 (93.65%), Query Frame = 1


		  
Query: 31  KTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKD 90
           +TEE T PFKNL SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPH HGKAKD
Sbjct: 3   ETEEPTIPFKNLSSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKAKD 62

Query: 91  TEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPD 150
            E KGHTDSVDQLCWDPKHADL+ATASGDKTVRLWD RSGKC Q AELSGENINITYKPD
Sbjct: 63  IELKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCAQLAELSGENINITYKPD 122

Query: 151 GAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYP 210
           G HIAVGNRDDELTILDVRKFKPIH+RKFNYEVNEIAW  T E FFLTTGNGTVEVLAYP
Sbjct: 123 GTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWSTTSEIFFLTTGNGTVEVLAYP 182

Query: 211 SLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTI 270
           SLK +DTL AHTAGCYCIAIDPLGRYFAVGSADSLVSLWDI EMLCV+TF KLE PVRTI
Sbjct: 183 SLKPVDTLMAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDISEMLCVKTFPKLESPVRTI 242

Query: 271 SFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKNKY 330
           SFNHTGEY+ASASEDLFIDIS+++TGR+ HQIPCRAAMNSVEWNPKSNLLAYAGDDKNKY
Sbjct: 243 SFNHTGEYLASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKSNLLAYAGDDKNKY 302

Query: 331 QTDEGVFRIFGFQSA 346
           QTDEGVFRIFGF+SA
Sbjct: 303 QTDEGVFRIFGFKSA 317

[Close]

BLAST of Spo09176.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMU0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_054440 PE=4 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 3.800e-189
Identity = 318/319 (99.69%), Postives = 319/319 (100.00%), Query Frame = 1


		  
Query: 27  MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG 86
           MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG
Sbjct: 1   MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG 60

Query: 87  KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT 146
           KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT
Sbjct: 61  KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT 120

Query: 147 YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV 206
           YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV
Sbjct: 121 YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV 180

Query: 207 LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP 266
           LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP
Sbjct: 181 LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP 240

Query: 267 VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD 326
           VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD
Sbjct: 241 VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD 300

Query: 327 KNKYQTDEGVFRIFGFQSA 346
           KNKYQTDEGVFRIFGFQ+A
Sbjct: 301 KNKYQTDEGVFRIFGFQNA 319

[Close]

BLAST of Spo09176.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C266_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g160810 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 4.200e-180
Identity = 302/319 (94.67%), Postives = 308/319 (96.55%), Query Frame = 1


		  
Query: 27  MAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHG 86
           MA+QK EEAT PFKNL SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPH HG
Sbjct: 1   MADQKAEEATIPFKNLYSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHG 60

Query: 87  KAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINIT 146
           K KD EFKGHTDSVDQLCWDPKH D+LATASGDKTVRLWD RSGKC+QQAELSGENINIT
Sbjct: 61  KVKDIEFKGHTDSVDQLCWDPKHGDVLATASGDKTVRLWDARSGKCSQQAELSGENINIT 120

Query: 147 YKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEV 206
           YKPDG HIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTG+KFFLTTGNGTVEV
Sbjct: 121 YKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGDKFFLTTGNGTVEV 180

Query: 207 LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP 266
           LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP
Sbjct: 181 LAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWP 240

Query: 267 VRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDD 326
           VRTISFNHTGEYIASASEDLFIDIS++ETGRS HQIPCRAAMNSVEWNPKSNLLAYAGDD
Sbjct: 241 VRTISFNHTGEYIASASEDLFIDISNVETGRSIHQIPCRAAMNSVEWNPKSNLLAYAGDD 300

Query: 327 KNKYQTDEGVFRIFGFQSA 346
           KNKYQ DEGVFRIFGFQSA
Sbjct: 301 KNKYQADEGVFRIFGFQSA 319

[Close]

BLAST of Spo09176.1 vs. UniProtKB/TrEMBL
Match: A0A059BRQ3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01999 PE=4 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 1.300e-168
Identity = 280/315 (88.89%), Postives = 297/315 (94.29%), Query Frame = 1


		  
Query: 31  KTEEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKD 90
           + EEA  PFKNL SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPH HGK KD
Sbjct: 62  RMEEAI-PFKNLPSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHGHGKVKD 121

Query: 91  TEFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPD 150
            E KGHTDSVDQLCWDPKHADL+ATASGDKTVRLWD RSGKC+QQAELSGENINITYKPD
Sbjct: 122 IELKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPD 181

Query: 151 GAHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYP 210
           G H+AVGNRDDELTILDVRKFKPIH+RKFNYEVNEIAW+M+GE FFLTTGNGTVEVLAYP
Sbjct: 182 GTHVAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMSGEMFFLTTGNGTVEVLAYP 241

Query: 211 SLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTI 270
           SL+ +DTL AHTAGCYCIAIDP+GRYFAVGSADSLVSLWDI EMLCVRTF KLEWPVRTI
Sbjct: 242 SLRPVDTLMAHTAGCYCIAIDPVGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTI 301

Query: 271 SFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKNKY 330
           SFNHTG+Y+ASASEDLFIDIS+++TGR+ HQIPCRAAMNSVEWNPK NLLAYAGDDKNKY
Sbjct: 302 SFNHTGDYVASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKY 361

Query: 331 QTDEGVFRIFGFQSA 346
           Q DEGVFRIFGF+SA
Sbjct: 362 QADEGVFRIFGFESA 375

[Close]

BLAST of Spo09176.1 vs. UniProtKB/TrEMBL
Match: A5ADM7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g01220 PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 4.900e-168
Identity = 281/312 (90.06%), Postives = 292/312 (93.59%), Query Frame = 1


		  
Query: 34  EATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEF 93
           E T PFKNL SREYQGHKKKVHSVAWNCTGTKLASGSVDQTAR+W IE H HGK KD E 
Sbjct: 2   EETIPFKNLHSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARIWLIEQHGHGKVKDIEL 61

Query: 94  KGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGAH 153
           KGHTDSVDQLCWDPKHADL+ATASGDKTVRLWD RSGKCTQQAELSGENINITYKPDG H
Sbjct: 62  KGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCTQQAELSGENINITYKPDGTH 121

Query: 154 IAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLK 213
           IAVGNRDDELTILDVRKFKPIHRRKF+YEVNEIAW+MTGE FFLTTGNGTVEVLAYP+L+
Sbjct: 122 IAVGNRDDELTILDVRKFKPIHRRKFSYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPALR 181

Query: 214 ALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFN 273
            LDTL AHTAGCYCIAIDP+GRYFAVGSADSLVSLWDI EMLCVRTF KLEWPVRTISFN
Sbjct: 182 PLDTLMAHTAGCYCIAIDPIGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFN 241

Query: 274 HTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKNKYQTD 333
           HTGEYIASASEDLFIDIS++ TGR+ HQIPCRAAMNSVEWNPK NLLAYAGDDKNKYQ D
Sbjct: 242 HTGEYIASASEDLFIDISNVHTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQAD 301

Query: 334 EGVFRIFGFQSA 346
           EGVFRIFGF+SA
Sbjct: 302 EGVFRIFGFESA 313

[Close]

BLAST of Spo09176.1 vs. UniProtKB/TrEMBL
Match: A0A067L389_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23824 PE=4 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 3.200e-167
Identity = 279/312 (89.42%), Postives = 290/312 (92.95%), Query Frame = 1


		  
Query: 34  EATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEF 93
           E T PFKNL SREYQGHKKKVHSVAWNC+GTKLASGSVDQTARVWHIEPH HGK KD E 
Sbjct: 2   EETIPFKNLHSREYQGHKKKVHSVAWNCSGTKLASGSVDQTARVWHIEPHGHGKIKDVEL 61

Query: 94  KGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGAH 153
           KGHTDSVDQLCWDPKHADL+ATASGDKTVRLWD RSGKC+QQ ELSGENINITY+PDG H
Sbjct: 62  KGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQTELSGENINITYRPDGTH 121

Query: 154 IAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLK 213
           IAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAW+MTGE F LTTGNGTVEVLAYPSL+
Sbjct: 122 IAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWNMTGEMFLLTTGNGTVEVLAYPSLR 181

Query: 214 ALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFN 273
            LDT+ AHTAGCYCIAIDP GRYFAVGSADSLVSLWDI EMLCVRTF KLEWPVRTISFN
Sbjct: 182 PLDTVVAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISFN 241

Query: 274 HTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKNKYQTD 333
           HTG+YIASASEDLFIDIS++ TGRS HQIPCRAAMNSVEWNPK NLLAYAGDDKNKY  D
Sbjct: 242 HTGDYIASASEDLFIDISNVHTGRSVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYLAD 301

Query: 334 EGVFRIFGFQSA 346
           EGVFRIFGF+SA
Sbjct: 302 EGVFRIFGFESA 313

[Close]

BLAST of Spo09176.1 vs. ExPASy Swiss-Prot
Match: THOC3_ARATH (THO complex subunit 3 OS=Arabidopsis thaliana GN=THO3 PE=1 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 6.800e-163
Identity = 269/314 (85.67%), Postives = 291/314 (92.68%), Query Frame = 1


		  
Query: 33  EEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTE 92
           EE T PFK+L SREYQGHKKKVHSVAWN  GTKLASGSVDQTAR+W+IEPH H KAKD E
Sbjct: 2   EETTIPFKSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLE 61

Query: 93  FKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGA 152
            KGHTDSVDQLCWDPKH+DL+ATASGDK+VRLWD RSGKCTQQ ELSGENINITYKPDG 
Sbjct: 62  LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGT 121

Query: 153 HIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSL 212
           H+AVGNRDDELTILDVRKFKP+HRRKFNYEVNEIAW+M G+ FFLTTG GTVEVL+YPSL
Sbjct: 122 HVAVGNRDDELTILDVRKFKPLHRRKFNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSL 181

Query: 213 KALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISF 272
           K LDTLTAHTAGCYCIAIDP GRYFAVGSADSLVSLWDI +MLC+RTF KLEWPVRTISF
Sbjct: 182 KPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISF 241

Query: 273 NHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKN-KYQ 332
           N++GEYIASASEDLFIDI++++TGR+ HQIPCRAAMNSVEWNPK NLLAYAGDDKN KY 
Sbjct: 242 NYSGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNPKYN 301

Query: 333 TDEGVFRIFGFQSA 346
           TDEGVFRIFGF+S+
Sbjct: 302 TDEGVFRIFGFESS 315

[Close]

BLAST of Spo09176.1 vs. ExPASy Swiss-Prot
Match: THOC3_MOUSE (THO complex subunit 3 OS=Mus musculus GN=Thoc3 PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 5.300e-91
Identity = 153/301 (50.83%), Postives = 209/301 (69.44%), Query Frame = 1


		  
Query: 44  SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEFKGHTDSVDQL 103
           +RE+  H  KVHSVAW+C G +LASGS D+TA V+ +E       K+  ++GH DSVDQL
Sbjct: 48  TREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDR--LVKENNYRGHGDSVDQL 107

Query: 104 CWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGAHIAVGNRDDEL 163
           CW P + DL  TASGDKT+R+WDVR+ KC       GENINI + PDG  IAVGN+DD +
Sbjct: 108 CWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVV 167

Query: 164 TILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLKALDTLTAHTA 223
           T +D +  +     +F +EVNEI+W+     FFLT GNG + +L+YP LK + ++ AH +
Sbjct: 168 TFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPS 227

Query: 224 GCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFNHTGEYIASAS 283
            C CI  DP+G+YFA GSAD+LVSLWD+ E++CVR F +L+WPVRT+SF+H G+ +ASAS
Sbjct: 228 NCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASAS 287

Query: 284 EDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKN-KYQT--DEGVFRIF 342
           ED FIDI+ +ETG    ++ C +   +V W+PK  LLA+A DDK+ KY +  + G  ++F
Sbjct: 288 EDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLF 346

[Close]

BLAST of Spo09176.1 vs. ExPASy Swiss-Prot
Match: THOC3_BOVIN (THO complex subunit 3 OS=Bos taurus GN=THOC3 PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 5.300e-91
Identity = 153/301 (50.83%), Postives = 209/301 (69.44%), Query Frame = 1


		  
Query: 44  SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEFKGHTDSVDQL 103
           +RE+  H  KVHSVAW+C G +LASGS D+TA V+ +E       K+  ++GH DSVDQL
Sbjct: 48  TREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDR--LVKENNYRGHGDSVDQL 107

Query: 104 CWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGAHIAVGNRDDEL 163
           CW P + DL  TASGDKT+R+WDVR+ KC       GENINI + PDG  IAVGN+DD +
Sbjct: 108 CWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVV 167

Query: 164 TILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLKALDTLTAHTA 223
           T +D +  +     +F +EVNEI+W+     FFLT GNG + +L+YP LK + ++ AH +
Sbjct: 168 TFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPS 227

Query: 224 GCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFNHTGEYIASAS 283
            C CI  DP+G+YFA GSAD+LVSLWD+ E++CVR F +L+WPVRT+SF+H G+ +ASAS
Sbjct: 228 NCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASAS 287

Query: 284 EDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKN-KYQT--DEGVFRIF 342
           ED FIDI+ +ETG    ++ C +   +V W+PK  LLA+A DDK+ KY +  + G  ++F
Sbjct: 288 EDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLF 346

[Close]

BLAST of Spo09176.1 vs. ExPASy Swiss-Prot
Match: THOC3_HUMAN (THO complex subunit 3 OS=Homo sapiens GN=THOC3 PE=1 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 6.900e-91
Identity = 153/301 (50.83%), Postives = 209/301 (69.44%), Query Frame = 1


		  
Query: 44  SREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEFKGHTDSVDQL 103
           +RE+  H  KVHSVAW+C G +LASGS D+TA V+ +E       K+  ++GH DSVDQL
Sbjct: 48  TREFLAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDR--LVKENNYRGHGDSVDQL 107

Query: 104 CWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGAHIAVGNRDDEL 163
           CW P + DL  TASGDKT+R+WDVR+ KC       GENINI + PDG  IAVGN+DD +
Sbjct: 108 CWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVV 167

Query: 164 TILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLKALDTLTAHTA 223
           T +D +  +     +F +EVNEI+W+     FFLT GNG + +L+YP LK + ++ AH +
Sbjct: 168 TFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPS 227

Query: 224 GCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFNHTGEYIASAS 283
            C CI  DP+G+YFA GSAD+LVSLWD+ E++CVR F +L+WPVRT+SF+H G+ +ASAS
Sbjct: 228 NCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASAS 287

Query: 284 EDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKN-KYQT--DEGVFRIF 342
           ED FIDI+ +ETG    ++ C +   +V W+PK  LLA+A DDK+ KY +  + G  ++F
Sbjct: 288 EDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLF 346

[Close]

BLAST of Spo09176.1 vs. ExPASy Swiss-Prot
Match: AAC3_DICDI (WD repeat-containing protein AAC3 OS=Dictyostelium discoideum GN=AAC3 PE=2 SV=2)

HSP 1 Score: 250.4 bits (638), Expect = 2.900e-65
Identity = 127/333 (38.14%), Postives = 194/333 (58.26%), Query Frame = 1


		  
Query: 35  ATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEP------------ 94
           A+  F    ++++ G+KKK  SVAWN  GTK+AS   D   RVW+ +P            
Sbjct: 149 ASRYFSECSTKDFIGNKKKSTSVAWNANGTKIASSGSDGIVRVWNFDPLGNSNNNNNSNN 208

Query: 95  ----HSHGKAKDT-EFKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAE 154
                 +   K+T E KGH  S++++ W PK+ DLLA+A  DK +++WDV+ GKC     
Sbjct: 209 TSSNSKNNNIKETIELKGHDGSIEKISWSPKNNDLLASAGTDKVIKIWDVKIGKCIGTVS 268

Query: 155 LSGENINITYKPDGAHIAVGNRDDELTILDVRKFKPIHRRKFN-YEVNEIAWDMTGEKFF 214
            + ENI++ + PDG  I    RDD L ++D+   K +   KFN  E+N++ WD  G+   
Sbjct: 269 TNSENIDVRWSPDGQFIVACTRDDHLALIDLPTIKTLKIYKFNGEELNQVGWDNNGDLIL 328

Query: 215 LTTGNGTVEVLAY-----PSLKALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDI 274
           +    G +E   +       +K L TL  HTA  YC+  DP G+Y A GSADS+VSLWDI
Sbjct: 329 MANSMGNIEAYKFLPKSTTHVKHLKTLYGHTASIYCMEFDPTGKYLAAGSADSIVSLWDI 388

Query: 275 KEMLCVRTFVKLEWPVRTISFNHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSV 334
           ++M+CV+TF+K  +P R++SF+  G++IA++S +  I+I  IE+ +  H I C + ++S+
Sbjct: 389 EDMMCVKTFIKSTFPCRSVSFSFDGQFIAASSFESTIEIFHIESSQPIHTIEC-SGVSSL 448

Query: 335 EWNPKSNLLAYAGDDKNKYQTDEGVFRIFGFQS 345
            W+P   LLAYA  + N+   D  + R+FG+ S
Sbjct: 449 MWHPTLPLLAYA-PEINENNKDPSI-RVFGYHS 478

[Close]

BLAST of Spo09176.1 vs. TAIR (Arabidopsis)
Match: AT5G56130.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 574.7 bits (1480), Expect = 3.800e-164
Identity = 269/314 (85.67%), Postives = 291/314 (92.68%), Query Frame = 1


		  
Query: 33  EEATHPFKNLCSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTE 92
           EE T PFK+L SREYQGHKKKVHSVAWN  GTKLASGSVDQTAR+W+IEPH H KAKD E
Sbjct: 2   EETTIPFKSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLE 61

Query: 93  FKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENINITYKPDGA 152
            KGHTDSVDQLCWDPKH+DL+ATASGDK+VRLWD RSGKCTQQ ELSGENINITYKPDG 
Sbjct: 62  LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGT 121

Query: 153 HIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSL 212
           H+AVGNRDDELTILDVRKFKP+HRRKFNYEVNEIAW+M G+ FFLTTG GTVEVL+YPSL
Sbjct: 122 HVAVGNRDDELTILDVRKFKPLHRRKFNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSL 181

Query: 213 KALDTLTAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISF 272
           K LDTLTAHTAGCYCIAIDP GRYFAVGSADSLVSLWDI +MLC+RTF KLEWPVRTISF
Sbjct: 182 KPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISF 241

Query: 273 NHTGEYIASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLAYAGDDKN-KYQ 332
           N++GEYIASASEDLFIDI++++TGR+ HQIPCRAAMNSVEWNPK NLLAYAGDDKN KY 
Sbjct: 242 NYSGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNPKYN 301

Query: 333 TDEGVFRIFGFQSA 346
           TDEGVFRIFGF+S+
Sbjct: 302 TDEGVFRIFGFESS 315

[Close]

BLAST of Spo09176.1 vs. TAIR (Arabidopsis)
Match: AT5G67320.1 (WD-40 repeat family protein)

HSP 1 Score: 110.2 bits (274), Expect = 2.700e-24
Identity = 86/283 (30.39%), Postives = 131/283 (46.29%), Query Frame = 1


		  
Query: 52  KKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEFKGHTDSVDQLCWDPKHAD 111
           K V ++ WN  GT LA+GS D  AR+W +    +G+   T  K H   +  L W+ K  D
Sbjct: 325 KDVTTLDWNGEGTLLATGSCDGQARIWTL----NGELISTLSK-HKGPIFSLKWNKK-GD 384

Query: 112 LLATASGDKTVRLWDVRSGKCTQQAEL-SGENINITYKPDGAHIAVGNRDDELTILDVRK 171
            L T S D+T  +WDV++ +  QQ E  SG  +++ ++ +    A  + D  + +  + +
Sbjct: 385 YLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDSMIYLCKIGE 444

Query: 172 FKPIHRRKFNY-EVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLKALDTLTAHTAGCYCIA 231
            +P      +  EVN + WD TG      + + T ++        +  L  HT   Y I 
Sbjct: 445 TRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIR 504

Query: 232 IDPLGR---------YFAVGSADSLVSLWDIK--EMLCVRTFVKLEWPVRTISFNHTGEY 291
             P G            A  S DS V LWD +  +MLC  +F     PV +++F+  GEY
Sbjct: 505 WSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLC--SFNGHREPVYSLAFSPNGEY 564

Query: 292 IASASEDLFIDISSIETGRSTHQIPCRAAMNSVEWNPKSNLLA 322
           IAS S D  I I SI+ G+          +  V WN + N +A
Sbjct: 565 IASGSLDKSIHIWSIKEGKIVKTYTGNGGIFEVCWNKEGNKIA 598

[Close]

BLAST of Spo09176.1 vs. TAIR (Arabidopsis)
Match: AT5G08560.1 (transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 92.0 bits (227), Expect = 7.500e-19
Identity = 86/348 (24.71%), Postives = 152/348 (43.68%), Query Frame = 1


		  
Query: 3   LIPRTSHQSKNRSI-HKQFQWELILMAEQKTEEATHPFKNLCSREYQGHKKKVHSVAWNC 62
           L+  + H  ++  + H     +L L ++ +  +  H   +  ++  + H  +V  + ++ 
Sbjct: 227 LVENSLHIQRDSCVFHNTLDSDLSLYSDHQCGK--HQIPSQTAQILESHTDEVWFLQFSH 286

Query: 63  TGTKLASGSVDQTARVWHIEPHSHGKAKDTEFKGHTDSVDQLCWDPKHADLLATASGDKT 122
            G  LAS S DQTA +W I    H   K T   GH   V  + W P    +L T   ++ 
Sbjct: 287 NGKYLASSSKDQTAIIWEISADGHISLKHT-LVGHHKPVIAILWSPDDRQVL-TCGAEEV 346

Query: 123 VRLWDVRSGKCTQQAELSG-ENINITYKPDGAHIAVGNRDDELTILDV-RKFKPIHRRKF 182
           +R WDV SG C    E  G   I+  + PDG  I  G  D  + + D+  + K   + + 
Sbjct: 347 IRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWDLDGREKECWKGQR 406

Query: 183 NYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLKALDTLTAHTAGCYCIAIDPLGRYFAV 242
             +V++IA  MT +  +L +      +  +     ++ L          ++    +Y  V
Sbjct: 407 TQKVSDIA--MTDDGKWLVSVCKDSVISLFDREATVERLIEEEDMITSFSLSNDNKYILV 466

Query: 243 GSADSLVSLWDI----KEMLCVRTFVKLEWPVRTISFNHTGEYIASASEDLFIDISSIET 302
              +  + LW+I    K +   +   +  + +R+    +   +IAS SED  + I    T
Sbjct: 467 NLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRST 526

Query: 303 GRSTHQIPCRA-AMNSVEWNPKS-NLLAYAGDDKNKYQTDEGVFRIFG 342
           G+   ++P  A A+N V W+P + ++LA A DD        G  RI+G
Sbjct: 527 GKLIVELPGHAGAVNCVSWSPTNLHMLASASDD--------GTIRIWG 560

[Close]

BLAST of Spo09176.1 vs. TAIR (Arabidopsis)
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 84.7 bits (208), Expect = 1.200e-16
Identity = 58/214 (27.10%), Postives = 104/214 (48.60%), Query Frame = 1


		  
Query: 47  YQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIE-PHSHGKAKDTEFKGHTDSVDQLCW 106
           Y+GH   +  +AW+       S S D T R+W    P+   K      +GHT+ V  + +
Sbjct: 81  YEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKV----LRGHTNFVFCVNF 140

Query: 107 DPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENI-NITYKPDGAHIAVGNRDDELT 166
           +P  ++L+ + S D+T+R+W+V++GKC +  +     I ++ +  DG+ I   + D    
Sbjct: 141 NPP-SNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCK 200

Query: 167 ILDVRK---FKPIHRRKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLKALDTLTAH 226
           I D ++    K +   K +  V+   +   G+   + T + T+++  Y + K L   T H
Sbjct: 201 IWDAKEGTCLKTLIDDK-SPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGH 260

Query: 227 TAGCYCIAID---PLGRYFAVGSADSLVSLWDIK 253
           T   +CI        G+Y   GS D+ V LWD++
Sbjct: 261 TNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQ 288

[Close]

BLAST of Spo09176.1 vs. TAIR (Arabidopsis)
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 80.9 bits (198), Expect = 1.700e-15
Identity = 62/252 (24.60%), Postives = 114/252 (45.24%), Query Frame = 1


		  
Query: 45  REYQGHKKKVHSVAWNCTGTKLASGSVDQTARVWHIEPHSHGKAKDTEFKGHTDSVDQLC 104
           +E+ GH+  +  VA++     + S S D+T ++W +E  S  K       GHT+    + 
Sbjct: 65  QEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKT----LIGHTNYAFCVN 124

Query: 105 WDPKHADLLATASGDKTVRLWDVRSGKCTQQAELSGENIN-ITYKPDGAHIAVGNRDDEL 164
           ++P+ ++++ + S D+TVR+WDV +GKC +      + +  + +  DG+ I   + D   
Sbjct: 125 FNPQ-SNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLC 184

Query: 165 TILDVRKFKPIHR--RKFNYEVNEIAWDMTGEKFFLTTGNGTVEVLAYPSLKALDTLTAH 224
            I D      +       N  V+ + +   G+   + T + T+ +    S K L T T H
Sbjct: 185 RIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH 244

Query: 225 TAGCYCIAID---PLGRYFAVGSADSLVSLWDIKEMLCVRTFVKLEWPVRTISFNHTGEY 284
               YCI+       G+    GS D+ V +W++     ++        V  ++ + T   
Sbjct: 245 VNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENL 304

Query: 285 IASASEDLFIDI 291
           IAS S D  + I
Sbjct: 305 IASGSLDKTVRI 311

The following BLAST results are available for this feature:

BLAST of Spo09176.1 vs. NCBI nr
BLAST of Spo09176.1 vs. UniProtKB/TrEMBL
BLAST of Spo09176.1 vs. ExPASy Swiss-Prot
BLAST of Spo09176.1 vs. TAIR (Arabidopsis)

BLAST of Spo09176.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902225892\|gb\|KNA20224.1\|	5.5e-189	99.6	hypothetical protein SOVF_0544...	[more]
gi\|731345475\|ref\|XP_010683937.1\|	6.1e-180	94.6	PREDICTED: THO complex subunit...	[more]
gi\|747099304\|ref\|XP_011097701.1\|	2.8e-169	90.3	PREDICTED: THO complex subunit...	[more]
gi\|1009107710\|ref\|XP_015881111.1\|	2.8e-169	90.3	PREDICTED: THO complex subunit...	[more]
gi\|694408961\|ref\|XP_009379130.1\|	1.4e-168	90.1	PREDICTED: THO complex subunit...	[more]

BLAST of Spo09176.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RMU0_SPIOL	3.8e-189	99.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8C266_BETVU	4.2e-180	94.6	Uncharacterized protein OS=Bet...	[more]
A0A059BRQ3_EUCGR	1.3e-168	88.8	Uncharacterized protein OS=Euc...	[more]
A5ADM7_VITVI	4.9e-168	90.0	Putative uncharacterized prote...	[more]
A0A067L389_JATCU	3.2e-167	89.4	Uncharacterized protein OS=Jat...	[more]

BLAST of Spo09176.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
THOC3_ARATH	6.8e-163	85.6	THO complex subunit 3 OS=Arabi...	[more]
THOC3_MOUSE	5.3e-91	50.8	THO complex subunit 3 OS=Mus m...	[more]
THOC3_BOVIN	5.3e-91	50.8	THO complex subunit 3 OS=Bos t...	[more]
THOC3_HUMAN	6.9e-91	50.8	THO complex subunit 3 OS=Homo ...	[more]
AAC3_DICDI	2.9e-65	38.1	WD repeat-containing protein A...	[more]

BLAST of Spo09176.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G56130.1	3.8e-164	85.6	Transducin/WD40 repeat-like su...	[more]
AT5G67320.1	2.7e-24	30.3	WD-40 repeat family protein	[more]
AT5G08560.1	7.5e-19	24.7	transducin family protein / WD...	[more]
AT4G02730.1	1.2e-16	27.1	Transducin/WD40 repeat-like su...	[more]
AT3G49660.1	1.7e-15	24.6	Transducin/WD40 repeat-like su...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 43..78 score: 1.2E-6coord: 92..126 score: 7.7E-5coord: 215..250 score: 8.
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 86..126 score: 2.4E-8coord: 40..79 score: 1.1E-8coord: 170..208 score: 120.0coord: 295..333 score: 46.0coord: 211..250 score: 6.6E-8coord: 253..292 score:
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 47..81 score: 13.483coord: 218..259 score: 12.647coord: 93..135 score: 16
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10		coord: 29..327 score: 3.7
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 47..301 score: 29
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 38..327 score: 3.43
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 113..127 scor
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 66..80 score: 1.7E-7coord: 237..251 score: 1.7E-7coord: 113..127 score: 1.
None	No IPR available	PANTHER	PTHR22839	THO COMPLEX SUBUNIT 3 THO3	coord: 33..344 score: 7.5E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
molecular_function	GO:0005515	protein binding