Spo09288.1 (mRNA) | SpinachBase

Overview


Name	Spo09288.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Iron-sulfur cluster assembly protein IscA
Location	SpoScf_01419 : 13999 .. 21138 (+)
Sequence length	1126

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATACCACCCCGACCAACCAAACGCCCCTTGTTGATTTGGAATCACCGAAAACAAAAGAGGCAAAAGTTTGGGATCGAGAGTATAATTTCGTGTATTTCTGTCCAAAAAAAAAAGAGAAGCTTGTGGCAGACACAACCTTCCCCTCGTATGATCGTGTCCTCCCAACCAAGAAATCCACAAAAAGATGGCAGCATTTCTAGCTAAAGCCGCGGAGAAAGCCGGCCCAACCATCCGCCGCCAAGCTCTGAGCTTGTCCGACGCCGCCGCCACCCGCATACAGCAGCTCCTGCAACAACGCCAGCGCTCTTTCCTCCGCCTCGGCGTCAAGGCTCGCGGCTGCAACGGCTTGTCTTACACCCTCAACTACGCCGGTACTCTTTCTTCTCTCGTTTATCGTGGCTATTTTACTGAAGATTTTAATTTTTATTCCTACCAGTTTTCAATCTAATACTGTATGTAATCGTTTACGGCTGAATTTTTTTGATTTGATTGATCGGCAATTAGAAAATACCATTTGAAATTGGGATTTATGTTTTTTTTTTTTTTTGGCAACAGGGATTTATGTTAGGGTTGGATGGTTTATGTTTCATTTGCTCTCTTATATGTGGATTGTATTTACTAGTAAAAATGGCTGGGACTTGTGTGCTGAAATTTTTGGATGATGAATTTGTTTTTTTTTTGTTTTTTTTGATGGAAGGATGATGAATTTGTTGATGAAACATTAAGAAACTAAGAAATGAGTTTTTGGAATTGGGATTGATTTTCTTTGTCAAACACTAAATTGGGTCGAAGTATGTATTGTGGATTTGTTTGTTTCCCTTACTGATAGTCCTAATTGACGTAGAATGCATATTTGGAACTCTAAAAGGACTGCTAATAATTGTTCTTGATGGAATTGTGCGTCTAGTTGCACAAAATGGGTAACGAGCAGTTCGGAAAGTTGATTTGTAAACTTAACGGCTTGCTAGTAGTGGCTGGAGCTGTTGTTTATTAGTTTCCTGATTTTTGGAACTGAAGAACTTCAAATTTTCACTCCACGAAAATAAGGGGAAAAGTACGAAGTATGGTGAGTAGACCTGGTTATTGGACAGGGTAGTCCAATGGATATAGGGTTAGGGTCAAGTTAATAGGGCTTTTATTGGGCAGGGCTCCTATTGGACAGGGCCTTTATTGGACAGGGTCATTATATGGTCAAACTTATACTACAATTATTTTGAAAAATAAAATAGTAATGATACAAAAAATTACGTGTATAGCTTCGTATTTACTTGTACTTGCACATGGCTATTTTGTTTTTCATTTTTCATTGCTCGTTTATTGACCCGCCCACTAATGACCCGCTATTGACCCGCGACCCGTTTTGACCCGCCCATTATCGACCCGCTAAAAATGACCCTTTCAATACCCGACCCTCTTTTAACCCGCACCGACCCTGACCCGCCCCGCCCGATAACCAGATCTAATGGTGAGAATTAAGAGGAATTCTACAATTGAAGATGCTAACTTATGTTTGCAAGGTTAATTTCCTGGTGCATATACCCAATGAGCATAGGTCTTCCTATTTCACGGATACTAGCGTAACTACTTACTTATTATAAAGTGGAGATGTGGGAAAAGGGGCGGGAATAGCTTTAGGCTTTATTCAACGGTAGAGGTAACCCTGTATGCTAAGAATGTTTGTATACCTTGTGATTACAGCGCAGATGTAAGAATTGGAATTACATAGCTTCTATATGGATATAGCCATGTAGGTATCTTGGTTATACATGATCTTGTTTTTTTTTGGTTTAATTGCTGTAGCATTATTTTACTTGTCCCGGAGGAAGGGGTTGAGTTTTTTGTGAACTATTACAACGTATTAGGTTCTTTTGACTGTGGTGGAGACTAGAGGATAGTAGTTTATAGCCCATATACTTGAGGTTTCATTTTATTGTGGGCAAGCAATGGCTTATAATCTGAGATTTTATGATAGTACAAAGTGGCTATCTGTAGGGTACACGTATTTTAGGTTTTTCCTTTGAGTAGAAGTATTACTCCCTCCGTCCCAGATTAGTTGTTACACTTACCTTTGCGCAAAGTTTTAGGTGATAAGTGGTTGTTTGGTTATCAATTGTTATTTTATTGAAAAAGTAGATGTGATAGGAGTTAGTGGGGTATTTTTTTAATTGAATGAGAGAGGGTGTGGGGACNAAAGTAGATGTGATAGGAGTTAGTGGGGTATTTTTTTAATTGAATGAGAGAGGGTGTGGGGACCAAAAAAAATTTAGTGGAAAGAGAGAGACAATATAATAATTGTGGGGTCATTCCAATTTAGAAGTGTAACAACTAATCTGGGACGGACGAAAAAGGAAAGTGTAACAACTAATCTGGGACGGAGTGAGTAGTAGTTAAAGAATAATATGTGGAACGTGGGTTTATACTAAAAGAGTTCCTTCTAACTGATTTTTTTTTTGAATCTCGATGAAATAGTAGAATCAATCCATCAAAGTAGTATAGTAGCTTATGATAGCATTCGGTCAAGCAGGGAAATAGCTTGATATACATTAGTAAAAAAGGCGGCAGTTACCTGACTGCATATAACTGGGTTTTTTTTTTCTTTTCTGAAGGGACTGCATACGTTTTACAAGTAGAGGCAAAAGTGTTAAATTTTCTTGGAGAAAGTTTATAGCAAAAATAATTTAAAAGATGTTGTGCAATTGTTGGATTCTGCATATCCATTATTTCAGTAATATTATTATAGTGCAGGTTACAATATAGATTGGTTTACAAGTGGCTGTAATATCATTCCATGTAAAGCATCATTGCAGTTGAACGTATGCAAGCTATTTGTGTATCCCTGACAGCTTATTGGAATATCATTAATAAAAAATCATACTCCACCTTAAAGTTTGTCCACTTCATGAATTTGTGAAATGTGAATAGATAGACAATGTTGTGTTCAAATTGGATAATTTGCTTGTAGTTTCCATTTAAAGAAAATAAATGTCCATGTGCTATTTGAATCTTAGTATAGAACTATAGATGTTTCTGATGTTCCCTGTCAGCAAATATGAATTACTACTGGTTTAAACTTAGTGATCTATTCTGGTGTACTGCTAGATTTATAATTGTTTAAAAGCCTGTTGTAAGGAAATTTTTGCTGGAAGATGATTTAACCTTATTAAGGAGAAAATTAATCATTGATCTAGAAAATCTTAACTTATAAGTTATGGTTTTGGAGTAAATTATTTAGAAAGGGTTTTGTATCCTACGTTTGGTTCAATTGGGGAATGTAGTTCAATTTTTGTTTTTGGCATTTCATAAATAAAGGAATGTAATTCACACCATCCTTGGACTATGGTCTTTTCTATTCAAACTCTCTTCTTCCTTCTCTACCTTCATTGTGGCCATCATCATCCCCTTTCCCCATCACCATCATTATTATCCTCTTTCCCTATCATCACCATCATCCTCCTCCTATTAGTAAATGAATTGTAAAGATGGTTTTTTCCTGTTCAAATCCTATCTATTAAGCGTTAGATATCGCTTTAATTCAACCATATTTAGTTCATGGTCATGCATTGGACCAGTGAAGCTTTTCCTTATTATTGGACTAGTAAATTTTAGGGTGGACATGCTTTATCTGTTGATGAAGGTGGTACTGGCGAATTGGGCGGTTAAAGCCAGTGGTGATGTGGGGTGTTACTGCAAGTGGTAAACTTCGAGCATCTGTTGCTACTCTGTTTTTTTTAGAGAGGGTGTACCGTGGGTGTTTTGGTTTTCGTGAAGAGGTTGGGACATGGTGTTGGAGCTTGAAGCTCAAAGTGTGGTGGTTGATGAAGGTGGGAGTGTTGGCAGTTGTCTTGGCTATTAAGTGTGGTGGTGGTTGTGACGATAGAAAGGTGTTGTTCATGGAATCATGGGGTTAGCTGGTTAGGATTGCCTCGGGTGATTCTTCATTATCTTAATATATATTTCAATGTTTCTTTGTGGAAATTTTAGTCTGCTGGGGCCGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTCATAACCCACTAAGGCAAGTGGGAGTGAGGGACTGAAGGAGTTAAAAACATGGTCAAAGGGATAATGTTGAACTTCCTTTTCCTCTGTTAAAAACCCTTACCAAAAAGGCCCTAAGTAGTTAGGGAGATTAAGATTCTTATTTTCTGGTGTAGACATAAATAAAGGGGTTGTCGTATATAAAGCCTTGTAATTTGTGTTTCATATATATGTTATAATTGATGTATATTACTATATATACCCTTGCAAGGGATTTTACTTTATACATCGTTCCTTTGTTCTTGTGTTAATTTTGGCCATTGAAAATGACTTTTATTTACTTTGAGTTTAGATCATATACGAATATATGGAGCTTTTTTAAAAATTTTATGTGATTTAGCAGGCAGGGTATAAGTTCCATCATAGCTAGATCGATCTATATGATTCAGTGAAGAAAGAGCCAAAGATGGGATTTTAAGTACATGAAGAATTGAGTGGGATGGAAATGAGGGGATGTATACAGTCACTGCATTTGGAGGTTCATTGATCAGGGCTTAAATAAAGAACTTCGTAGGTTTCCAAATTGAATATACATACCGAGAAATTGAATTCGAGTCCACAATTTTCCATTAGATCCAGGATCAATTTTCACAATCTCCTGTTTAGTAACTAGGGAGGCCTAGATATGCATTTCCATACGCATCCCGACATCAAGTACATTACCCCCTGTTTGATGTCCAATTCTATTATCTGCATCATTTATACACTATCATCTTCCATTGTTTTGATTTGCGCCAATTCCTTTTTAAATAGCCAAATTCAAGAAATTTTTTTGTTAATTCATTGGATATGAATTGGAAACATATACATTGCAATAGGTCTCCATGACTTTATGTTAAGCTCTTTTTTATATATTTGTAGTTGGCTGAAGCATTTCAACTGCCCCTTTAACATTAAGACATGCTAACATCTTGTTTGCCATCAATCAGATGTAACTACACTGACATTGTAAGTTTTGTGTCCACAGCTCACAGTTGTCTAATTGTCATCTTCTATGTAATGATTTTTTTGACTTTTGTGCTTGTGTTAATGCGCAACACAAATGTCAAAATGTTAGCTACAGAATAGTTTAGTACAAACAAGGTAGCAGAACACTATAATGTCCTGTTGCTGATTATTATGACAATTATTTGTAACTGTAAAATTTGAATCTAAAACAAGTCTTGTTGAGTTTAATTATCTGAAAGATTTTTTATCTCTATGATCTTAATGTCCAGATGAAAAGGGGAAGTTCGATGAGCTCATTGAGGACAAGGGAGTCAAGATCCTTATTGAACCGAAAGCCCTAATGCATGTCATAGGCACGAAAATGGATTTTGTTGATGACAAACTCAGGTGCGTTTGTTTTAACTTTTAAGTGTTAGTCAACTGGCTGAGTAGTGATCTACAATGCATTTTCATACATGGTTTTTATGGTATGCTAAGACGCATCAACTTTGATACTTTCTGTTTAGTTTTAGTCAAATTAAAATGGACAAACTGGTACCACTCATCCTTGTCGATAAGGTTGATCAACAAACTTTCTAATCTCTATTAGATACACACCTCTTCTCAATTTTAGTGTTATTGTTGATGCCATTATTATTGTTGTTGCTGTTTAGACCTTCTCGGTTTAGTGTCATTATTGTTGCTATTGCTGTTACTGTTATTTGACTATTAGTAATATTGTTGTATGAAATGGTATGCAGACTTCCACTCTTGGTCCAACATTAAAAAAAGTGTATCCAATACTTACAGAAATAGGCTTTCCTCTTTTTCCTTGACGAAGAGGATGTAAATATATACTCTGTAGTAGGTATTTAGAAAAAAGTGTAATATTTGTTGACTAGCAGGGTTTGGGCTGTAGGACTGCAGGACTTGCATACAATTACACCTCACCAGACCTTGCTTTAGTAGAACTGATTTTGGATGCTGATGTTGTATTACAAACACCTTTCTCTATGCCTAAATGAGATCCTTGCATGTGCGACCTCGAGGAAGCTCCTACTTGACTTGCCTCGTTCTATCACTAGTGTATCCGGAGCTTTTATATGGGGAATGAACTGAATTTTATAAAAATGACCATCTTCCTTTTTGTAGTATGCAAGTTGTGTAATACTTGGATTAGTTTTTTCTTTTTCTATTAAAAAAAAAATACTACGTATACGAAGTATTTAGTTTGTAATGCGTGCCCATTCTCTCACTTCGTTGATAGTAGCGTTTTTTATTCCTTTTTTACATTTTTGCAGGTCAGAATTCATTTTCATAAATCCAAATTCTAAAGGGCAATGTGGATGTGGAGAATCATTCATGACAACTAGCAGTTCAGAAGCTTCTAAACAAGGGCGCGGCTAGATCATTAACGATTAACTGCTTTTTGGTAATTTACTCAATTTACTCAGTTCGGCTGTTTGTTTTAACCTTAAAAAAGAATATTATGGCAAGTGAGCAACAAAAGGAGAAAACTGTGTCTTTTAGATGTTCAAGTAATGTATATGTACATTCTTTTGGTGGTTATGTGAAGCTAAGATTATTGTAAATAAAACAATAAGATATCATGTTGTACATGAGTTTCTTCCATGAGTTTTTTTTGGTGATCCTGTTTAGTTTATTTATTGGTGGAGTGGATTTCTTATTATGTTGTCAAGTCATAATGCCAGTGATTTTCAGAGGTTGATTCTATTTCCTACAAAGTTTTCTTAAATTACACAAACAAGTGTGAGTGTGTAACATTGTACCATGCATCATGCATGTACTACTATAATGCTTTGTTAGCCAATTCACGCAATTTGGATCATTATTCATTCAGGGTTAGTGAAATACTACATATGTAACACTAGTCTTGATCACGGTACACTTTTATATACCATTGACTAGTTTTAAG

mRNA sequence

TCATACCACCCCGACCAACCAAACGCCCCTTGTTGATTTGGAATCACCGAAAACAAAAGAGGCAAAAGTTTGGGATCGAGAGTATAATTTCGTGTATTTCTGTCCAAAAAAAAAAGAGAAGCTTGTGGCAGACACAACCTTCCCCTCGTATGATCGTGTCCTCCCAACCAAGAAATCCACAAAAAGATGGCAGCATTTCTAGCTAAAGCCGCGGAGAAAGCCGGCCCAACCATCCGCCGCCAAGCTCTGAGCTTGTCCGACGCCGCCGCCACCCGCATACAGCAGCTCCTGCAACAACGCCAGCGCTCTTTCCTCCGCCTCGGCGTCAAGGCTCGCGGCTGCAACGGCTTGTCTTACACCCTCAACTACGCCGATGAAAAGGGGAAGTTCGATGAGCTCATTGAGGACAAGGGAGTCAAGATCCTTATTGAACCGAAAGCCCTAATGCATGTCATAGGCACGAAAATGGATTTTGTTGATGACAAACTCAGGTCAGAATTCATTTTCATAAATCCAAATTCTAAAGGGCAATGTGGATGTGGAGAATCATTCATGACAACTAGCAGTTCAGAAGCTTCTAAACAAGGGCGCGGCTAGATCATTAACGATTAACTGCTTTTTGGTAATTTACTCAATTTACTCAGTTCGGCTGTTTGTTTTAACCTTAAAAAAGAATATTATGGCAAGTGAGCAACAAAAGGAGAAAACTGTGTCTTTTAGATGTTCAAGTAATGTATATGTACATTCTTTTGGTGGTTATGTGAAGCTAAGATTATTGTAAATAAAACAATAAGATATCATGTTGTACATGAGTTTCTTCCATGAGTTTTTTTTGGTGATCCTGTTTAGTTTATTTATTGGTGGAGTGGATTTCTTATTATGTTGTCAAGTCATAATGCCAGTGATTTTCAGAGGTTGATTCTATTTCCTACAAAGTTTTCTTAAATTACACAAACAAGTGTGAGTGTGTAACATTGTACCATGCATCATGCATGTACTACTATAATGCTTTGTTAGCCAATTCACGCAATTTGGATCATTATTCATTCAGGGTTAGTGAAATACTACATATGTAACACTAGTCTTGATCACGGTACACTTTTATATACCATTGACTAGTTTTAAG

Coding sequence (CDS)

ATGGCAGCATTTCTAGCTAAAGCCGCGGAGAAAGCCGGCCCAACCATCCGCCGCCAAGCTCTGAGCTTGTCCGACGCCGCCGCCACCCGCATACAGCAGCTCCTGCAACAACGCCAGCGCTCTTTCCTCCGCCTCGGCGTCAAGGCTCGCGGCTGCAACGGCTTGTCTTACACCCTCAACTACGCCGATGAAAAGGGGAAGTTCGATGAGCTCATTGAGGACAAGGGAGTCAAGATCCTTATTGAACCGAAAGCCCTAATGCATGTCATAGGCACGAAAATGGATTTTGTTGATGACAAACTCAGGTCAGAATTCATTTTCATAAATCCAAATTCTAAAGGGCAATGTGGATGTGGAGAATCATTCATGACAACTAGCAGTTCAGAAGCTTCTAAACAAGGGCGCGGCTAG

Protein sequence

MAAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLNYADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMTTSSSEASKQGRG

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo09288	Spo09288	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo09288.1	Spo09288.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09288.1.exon.1	Spo09288.1.exon.1	exon
Spo09288.1.exon.2	Spo09288.1.exon.2	exon
Spo09288.1.exon.3	Spo09288.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09288.1.utr5p.1	Spo09288.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09288.1.CDS.1	Spo09288.1.CDS.1	CDS
Spo09288.1.CDS.2	Spo09288.1.CDS.2	CDS
Spo09288.1.CDS.3	Spo09288.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09288.1.utr3p.1	Spo09288.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo09288.1 vs. NCBI nr
Match: gi|902173203|gb|KNA08235.1| (hypothetical protein SOVF_164410 [Spinacia oleracea])

HSP 1 Score: 262.3 bits (669), Expect = 4.700e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


		  
Query: 1   MAAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLN 60
           MAAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLN
Sbjct: 1   MAAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLN 60

Query: 61  YADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 120
           YADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE
Sbjct: 61  YADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 120

Query: 121 SFMTTSSSEASKQGRG 137
           SFMTTSSSEASKQGRG
Sbjct: 121 SFMTTSSSEASKQGRG 136

[Close]

BLAST of Spo09288.1 vs. NCBI nr
Match: gi|731360825|ref|XP_010692027.1| (PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 243.8 bits (621), Expect = 1.700e-61
Identity = 123/135 (91.11%), Postives = 133/135 (98.52%), Query Frame = 1


		  
Query: 1   MAAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLN 60
           M+AFLAKAAE+AGPTIRRQALSL+DAAA+RI+QLLQQRQRSFLRLGVKARGCNGLSYTLN
Sbjct: 1   MSAFLAKAAERAGPTIRRQALSLTDAAASRIKQLLQQRQRSFLRLGVKARGCNGLSYTLN 60

Query: 61  YADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 120
           YAD+KGKFDELIEDKGVKILI+PKALMHVIGT+MDFVDDKLRSEFIFINPNSKGQCGCGE
Sbjct: 61  YADDKGKFDELIEDKGVKILIDPKALMHVIGTEMDFVDDKLRSEFIFINPNSKGQCGCGE 120

Query: 121 SFMTTSSSEASKQGR 136
           SFMT S S+A+KQGR
Sbjct: 121 SFMTMSGSDAAKQGR 135

[Close]

BLAST of Spo09288.1 vs. NCBI nr
Match: gi|568856433|ref|XP_006481788.1| (PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial [Citrus sinensis])

HSP 1 Score: 229.2 bits (583), Expect = 4.400e-57
Identity = 112/134 (83.58%), Postives = 128/134 (95.52%), Query Frame = 1


		  
Query: 1   MAAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLN 60
           MA+FLA+AAEK GP +RRQA++L+D+AA+R++ LLQQRQR +L+LGVKARGCNGLSYTLN
Sbjct: 1   MASFLAQAAEKIGPAVRRQAVTLTDSAASRVRHLLQQRQRPYLKLGVKARGCNGLSYTLN 60

Query: 61  YADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 120
           YADE+ KFDEL+EDKGVKILI+PKALMHVIGTKMDFVDDKLRSEF+FINPNSKGQCGCGE
Sbjct: 61  YADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGE 120

Query: 121 SFMTTSSSEASKQG 135
           SFMTTSSS ASKQG
Sbjct: 121 SFMTTSSSGASKQG 134

[Close]

BLAST of Spo09288.1 vs. NCBI nr
Match: gi|297740107|emb|CBI30289.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 224.2 bits (570), Expect = 1.400e-55
Identity = 111/131 (84.73%), Postives = 125/131 (95.42%), Query Frame = 1


		  
Query: 2   AAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLNY 61
           ++FLA AA KAGP++RRQAL+L+DAAA+RI+ LLQQRQR+FLRLGVKARGCNGLSYTLNY
Sbjct: 3   SSFLAAAAAKAGPSLRRQALTLTDAAASRIRHLLQQRQRTFLRLGVKARGCNGLSYTLNY 62

Query: 62  ADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGES 121
           AD+KGKFDEL+EDKGVKILI+PKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGES
Sbjct: 63  ADDKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGES 122

Query: 122 FMTTSSSEASK 133
           FMTT +  A+K
Sbjct: 123 FMTTGNPGAAK 133

[Close]

BLAST of Spo09288.1 vs. NCBI nr
Match: gi|720050122|ref|XP_010271663.1| (PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial [Nelumbo nucifera])

HSP 1 Score: 224.2 bits (570), Expect = 1.400e-55
Identity = 111/132 (84.09%), Postives = 123/132 (93.18%), Query Frame = 1


		  
Query: 1   MAAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLN 60
           MA+FLA AAEK GP +RRQAL+L+D+AA RI+ LL++RQR FLRLGVKARGCNGLSYTLN
Sbjct: 1   MASFLAAAAEKVGPALRRQALTLTDSAAARIRHLLEKRQRQFLRLGVKARGCNGLSYTLN 60

Query: 61  YADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 120
           YADEKGKFDEL+EDKG KILI+PKALMHVIGTKMDFVDD LRSEFIFINPNSKGQCGCGE
Sbjct: 61  YADEKGKFDELVEDKGAKILIDPKALMHVIGTKMDFVDDNLRSEFIFINPNSKGQCGCGE 120

Query: 121 SFMTTSSSEASK 133
           SFMTTSS+ A+K
Sbjct: 121 SFMTTSSAGATK 132

[Close]

BLAST of Spo09288.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLU5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_164410 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 3.300e-67
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


		  
Query: 1   MAAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLN 60
           MAAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLN
Sbjct: 1   MAAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLN 60

Query: 61  YADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 120
           YADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE
Sbjct: 61  YADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 120

Query: 121 SFMTTSSSEASKQGRG 137
           SFMTTSSSEASKQGRG
Sbjct: 121 SFMTTSSSEASKQGRG 136

[Close]

BLAST of Spo09288.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BG08_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g017530 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.200e-61
Identity = 123/135 (91.11%), Postives = 133/135 (98.52%), Query Frame = 1


		  
Query: 1   MAAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLN 60
           M+AFLAKAAE+AGPTIRRQALSL+DAAA+RI+QLLQQRQRSFLRLGVKARGCNGLSYTLN
Sbjct: 1   MSAFLAKAAERAGPTIRRQALSLTDAAASRIKQLLQQRQRSFLRLGVKARGCNGLSYTLN 60

Query: 61  YADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 120
           YAD+KGKFDELIEDKGVKILI+PKALMHVIGT+MDFVDDKLRSEFIFINPNSKGQCGCGE
Sbjct: 61  YADDKGKFDELIEDKGVKILIDPKALMHVIGTEMDFVDDKLRSEFIFINPNSKGQCGCGE 120

Query: 121 SFMTTSSSEASKQGR 136
           SFMT S S+A+KQGR
Sbjct: 121 SFMTMSGSDAAKQGR 135

[Close]

BLAST of Spo09288.1 vs. UniProtKB/TrEMBL
Match: F6HKK6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g03400 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 9.800e-56
Identity = 111/131 (84.73%), Postives = 125/131 (95.42%), Query Frame = 1


		  
Query: 2   AAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLNY 61
           ++FLA AA KAGP++RRQAL+L+DAAA+RI+ LLQQRQR+FLRLGVKARGCNGLSYTLNY
Sbjct: 30  SSFLAAAAAKAGPSLRRQALTLTDAAASRIRHLLQQRQRTFLRLGVKARGCNGLSYTLNY 89

Query: 62  ADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGES 121
           AD+KGKFDEL+EDKGVKILI+PKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGES
Sbjct: 90  ADDKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGES 149

Query: 122 FMTTSSSEASK 133
           FMTT +  A+K
Sbjct: 150 FMTTGNPGAAK 160

[Close]

BLAST of Spo09288.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KTF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G614650 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.700e-55
Identity = 111/132 (84.09%), Postives = 124/132 (93.94%), Query Frame = 1


		  
Query: 2   AAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLNY 61
           ++F A A++KAGP  RRQ L+L++AAA RI+QLLQQRQR FLRLGVKARGCNGLSYTLNY
Sbjct: 6   SSFFAAASQKAGPAARRQILTLTEAAAARIRQLLQQRQRPFLRLGVKARGCNGLSYTLNY 65

Query: 62  ADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGES 121
           ADEKGKFDEL+ED+ VKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGES
Sbjct: 66  ADEKGKFDELVEDQNVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGES 125

Query: 122 FMTTSSSEASKQ 134
           FMTTSS+EA+K+
Sbjct: 126 FMTTSSAEANKK 137

[Close]

BLAST of Spo09288.1 vs. UniProtKB/TrEMBL
Match: W9QGG6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018365 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.900e-55
Identity = 111/133 (83.46%), Postives = 122/133 (91.73%), Query Frame = 1


		  
Query: 2   AAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLNY 61
           AA  +    KAGPT+RRQ LSL+DAAA RI+ LL+QRQR FL LGVKARGCNGLSYTLNY
Sbjct: 3   AASSSSVLSKAGPTLRRQVLSLTDAAADRIRHLLRQRQRPFLSLGVKARGCNGLSYTLNY 62

Query: 62  ADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGES 121
           ADEKGKFDEL+EDKGVKILIEPKALMHVIGTKMDF+DDKLRSEFIF+NPNSKGQCGCGES
Sbjct: 63  ADEKGKFDELVEDKGVKILIEPKALMHVIGTKMDFIDDKLRSEFIFVNPNSKGQCGCGES 122

Query: 122 FMTTSSSEASKQG 135
           FMTTSS+EA+K+G
Sbjct: 123 FMTTSSAEAAKRG 135

[Close]

BLAST of Spo09288.1 vs. ExPASy Swiss-Prot
Match: ISAM1_ARATH (Iron-sulfur assembly protein IscA-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g16710 PE=2 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 1.000e-53
Identity = 101/128 (78.91%), Postives = 117/128 (91.41%), Query Frame = 1


		  
Query: 5   LAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLNYADE 64
           LA AA + GP +R+Q L+L+D AA+R+  LLQQRQ+ FLRLGVKARGCNGLSYTLNYADE
Sbjct: 7   LAAAAARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLNYADE 66

Query: 65  KGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMT 124
           KGKFDEL+E+KGV+IL+EPKALMHVIGTKMDFVDDKLRSEF+FINPNS+GQCGCGESFMT
Sbjct: 67  KGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVFINPNSQGQCGCGESFMT 126

Query: 125 TSSSEASK 133
           TS+S A +
Sbjct: 127 TSTSSAKQ 134

[Close]

BLAST of Spo09288.1 vs. ExPASy Swiss-Prot
Match: ISAM3_ARATH (Iron-sulfur assembly protein IscA-like 3, mitochondrial OS=Arabidopsis thaliana GN=At2g36260 PE=3 SV=2)

HSP 1 Score: 171.0 bits (432), Expect = 8.900e-42
Identity = 80/110 (72.73%), Postives = 99/110 (90.00%), Query Frame = 1


		  
Query: 16  IRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLNYADEKGKFDELIEDK 75
           +R+Q L+LSD AA RI+QLLQ +Q+ FLRL V+A+GCNGLSY LNYA EKGKFDE++E+K
Sbjct: 1   MRKQVLALSDTAAARIRQLLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEK 60

Query: 76  GVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMTT 126
           GVKIL++PKA+MHVIGT+MDFVDDKLRSEF+F+NPN+  +CGCGESF TT
Sbjct: 61  GVKILVDPKAVMHVIGTEMDFVDDKLRSEFVFVNPNAT-KCGCGESFTTT 109

[Close]

BLAST of Spo09288.1 vs. ExPASy Swiss-Prot
Match: ISA1_YEAST (Iron-sulfur assembly protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ISA1 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.600e-27
Identity = 56/107 (52.34%), Postives = 78/107 (72.90%), Query Frame = 1


		  
Query: 17  RRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLNYADEKGKFDELIEDKG 76
           R+  ++LS  A   ++ LL Q +   +R+  + RGC+GL+Y L Y  E GKFDE++E  G
Sbjct: 143 RKALITLSPKAIKHLRALLAQPEPKLIRVSARNRGCSGLTYDLQYITEPGKFDEVVEQDG 202

Query: 77  VKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFM 124
           VKI+I+ KAL  +IG++MD++DDKL S+F+F NPNSKG CGCGESFM
Sbjct: 203 VKIVIDSKALFSIIGSEMDWIDDKLASKFVFKNPNSKGTCGCGESFM 249

[Close]

BLAST of Spo09288.1 vs. ExPASy Swiss-Prot
Match: ISCA1_DROME (Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Drosophila melanogaster GN=l(1)G0136 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.000e-26
Identity = 65/122 (53.28%), Postives = 83/122 (68.03%), Query Frame = 1


		  
Query: 2   AAFLAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSF-LRLGVKARGCNGLSYTLN 61
           A   A    K  PT  R AL+L+ AA  RI+ LLQ +     L++GV+ RGCNGLSYTL+
Sbjct: 9   ATVRAVKGRKLIPT--RAALTLTPAAVLRIKTLLQDKPDMVGLKVGVRQRGCNGLSYTLD 68

Query: 62  YADEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 121
           YA +K K DE +   GVK+ I+ KA + ++GT+MDFV+ KL SEF+F NPN KG CGCGE
Sbjct: 69  YASQKDKLDEEVVQDGVKVFIDKKAQLSLLGTEMDFVESKLSSEFVFNNPNIKGTCGCGE 128

Query: 122 SF 123
           SF
Sbjct: 129 SF 128

[Close]

BLAST of Spo09288.1 vs. ExPASy Swiss-Prot
Match: Y484_RICPR (Uncharacterized protein RP484 OS=Rickettsia prowazekii (strain Madrid E) GN=RP484 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.200e-25
Identity = 50/107 (46.73%), Postives = 82/107 (76.64%), Query Frame = 1


		  
Query: 18  RQALSLSDAAATRIQQLLQQRQRSF--LRLGVKARGCNGLSYTLNYADEKGKFDELIEDK 77
           +  +SL+DAAA +++ L+++R +    +R+G+K+ GC G +Y + YAD K +FDE++E+K
Sbjct: 2   KNVISLTDAAAKQVKLLIEKRAKPTFGIRVGIKSGGCAGQTYYVEYADNKNQFDEVVEEK 61

Query: 78  GVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESF 123
           GV+ILI+PK LM+++G++MD+V+   +S+F F NPN K  CGCG+SF
Sbjct: 62  GVRILIDPKTLMYILGSEMDYVETNFKSQFTFTNPNEKANCGCGKSF 108

[Close]

BLAST of Spo09288.1 vs. TAIR (Arabidopsis)
Match: AT2G16710.3 (Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 204.1 bits (518), Expect = 5.300e-53
Identity = 101/134 (75.37%), Postives = 117/134 (87.31%), Query Frame = 1


		  
Query: 5   LAKAAEKAGPTIRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLNYA-- 64
           LA AA + GP +R+Q L+L+D AA+R+  LLQQRQ+ FLRLGVKARGCNGLSYTLNYA  
Sbjct: 7   LAAAAARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLNYAGK 66

Query: 65  ----DEKGKFDELIEDKGVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGC 124
               DEKGKFDEL+E+KGV+IL+EPKALMHVIGTKMDFVDDKLRSEF+FINPNS+GQCGC
Sbjct: 67  TSGNDEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVFINPNSQGQCGC 126

Query: 125 GESFMTTSSSEASK 133
           GESFMTTS+S A +
Sbjct: 127 GESFMTTSTSSAKQ 140

[Close]

BLAST of Spo09288.1 vs. TAIR (Arabidopsis)
Match: AT2G36260.1 (Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 171.0 bits (432), Expect = 5.000e-43
Identity = 80/110 (72.73%), Postives = 99/110 (90.00%), Query Frame = 1


		  
Query: 16  IRRQALSLSDAAATRIQQLLQQRQRSFLRLGVKARGCNGLSYTLNYADEKGKFDELIEDK 75
           +R+Q L+LSD AA RI+QLLQ +Q+ FLRL V+A+GCNGLSY LNYA EKGKFDE++E+K
Sbjct: 1   MRKQVLALSDTAAARIRQLLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEK 60

Query: 76  GVKILIEPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGESFMTT 126
           GVKIL++PKA+MHVIGT+MDFVDDKLRSEF+F+NPN+  +CGCGESF TT
Sbjct: 61  GVKILVDPKAVMHVIGTEMDFVDDKLRSEFVFVNPNAT-KCGCGESFTTT 109

The following BLAST results are available for this feature:

BLAST of Spo09288.1 vs. NCBI nr
BLAST of Spo09288.1 vs. UniProtKB/TrEMBL
BLAST of Spo09288.1 vs. ExPASy Swiss-Prot
BLAST of Spo09288.1 vs. TAIR (Arabidopsis)

BLAST of Spo09288.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902173203\|gb\|KNA08235.1\|	4.7e-67	100.	hypothetical protein SOVF_1644...	[more]
gi\|731360825\|ref\|XP_010692027.1\|	1.7e-61	91.1	PREDICTED: iron-sulfur assembl...	[more]
gi\|568856433\|ref\|XP_006481788.1\|	4.4e-57	83.5	PREDICTED: iron-sulfur assembl...	[more]
gi\|297740107\|emb\|CBI30289.3\|	1.4e-55	84.7	unnamed protein product [Vitis...	[more]
gi\|720050122\|ref\|XP_010271663.1\|	1.4e-55	84.0	PREDICTED: iron-sulfur assembl...	[more]

BLAST of Spo09288.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QLU5_SPIOL	3.3e-67	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BG08_BETVU	1.2e-61	91.1	Uncharacterized protein OS=Bet...	[more]
F6HKK6_VITVI	9.8e-56	84.7	Putative uncharacterized prote...	[more]
A0A0A0KTF0_CUCSA	1.7e-55	84.0	Uncharacterized protein OS=Cuc...	[more]
W9QGG6_9ROSA	2.9e-55	83.4	Uncharacterized protein OS=Mor...	[more]

BLAST of Spo09288.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ISAM1_ARATH	1.0e-53	78.9	Iron-sulfur assembly protein I...	[more]
ISAM3_ARATH	8.9e-42	72.7	Iron-sulfur assembly protein I...	[more]
ISA1_YEAST	3.6e-27	52.3	Iron-sulfur assembly protein 1...	[more]
ISCA1_DROME	4.0e-26	53.2	Iron-sulfur cluster assembly 1...	[more]
Y484_RICPR	1.2e-25	46.7	Uncharacterized protein RP484 ...	[more]

BLAST of Spo09288.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT2G16710.3	5.3e-53	75.3	Iron-sulphur cluster biosynthe...	[more]
AT2G36260.1	5.0e-43	72.7	Iron-sulphur cluster biosynthe...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000361	FeS cluster biogenesis	GENE3D	2.60.300.12		coord: 20..113 score: 3.3
IPR000361	FeS cluster biogenesis	PFAM	PF01521	Fe-S_biosyn	coord: 21..120 score: 1.0
IPR000361	FeS cluster biogenesis	unknown	SSF89360	HesB-like domain	coord: 20..113 score: 4.97
IPR016092	FeS cluster insertion protein	TIGRFAMs	TIGR00049	TIGR00049	coord: 22..123 score: 5.3
IPR017870	FeS cluster insertion, C-terminal, conserved site	PROSITE	PS01152	HESB	coord: 105..122 scor
None	No IPR available	PANTHER	PTHR10072	IRON-SULFUR CLUSTER ASSEMBLY PROTEIN	coord: 10..124 score: 6.3
None	No IPR available	PANTHER	PTHR10072:SF51	SUBFAMILY NOT NAMED	coord: 10..124 score: 6.3

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0005198	structural molecule activity