Spo09351.1 (mRNA) | SpinachBase

Overview


Name	Spo09351.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	fibrillarin 2
Location	SpoScf_03485 : 7411 .. 16537 (+)
Sequence length	909

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAAGTGTACTGTTGCTGGATCGGAAACTGGATGTGAGGTTATATGGTTAAGCAACTTTCCTACAGTTGCCTCTGATGCTGGAGAAATGCAGATAAACAGGTACTTAATGTCTGGTAAAAAGATGGCTTATGGAGTTGAAAAATATCACATTAAGAATTGTTGCAGGCTCATTTCCTTTTCTAGAGGAGTATTGATGGTTCTGTTAACCGAATTAGTTGTAGATTGTGCAGTCCAGTAAATCAGATAATAGATGGGTCCAATTCTTGTGAACTGTGAGGTAAATATTAACCTACTTTGTATATAATTTTACAAGACATATAGTCCATGAAAATGCGCAAGGGTACATGTCCTGATCATGTAGGTATGTTTGATCTTGGCTCAATCGGATGTTTTAATCATCTTAGTATGTATTGTTGCATTGATTTCTTGATAGTTATAACGAATTCTATTTTGATTATTTGGGTATCATCTTAGTATTTATAGTTTCATTGGTTAGGTTATTGCATAATCATGGAATGTTAAAAGAATATGGTAAAGCTATAATATGTTAAAAGAATAGGGTAAAGCAACATAATTTAGCAGTCCGTTAATTAATAAACGTTGATTACTCTTCACAACCGTCAACTATAACAGGTGTAGTTTCATGAGCTTATGTGCGTCATGAGCTTGAGTACGTGCTACAAACCGGATCTTGTAAGTAATAGGTGTAGTTTCATGAGATATGCTATAATAGGTGTAGCTTCAACTATAATAGATGTAGTTTCATGAGATATGCTACCCTGTTTCCATTATTAGATTGCTCGCATTTTTGTTGGGCTGTTGCAAAGCTTATAGCTGACTAGGAGTTGGTTGATTTCATTGACTGTTTATGACACTCTTGGGCATATAATTTATATGAGAATAGATTTAGCCATTTAGGTGAAAGGCTGTTCAGAACTGCAAGAATGCCTCAAATAATGTATTAGTTTTTGTGATTTTTTATTGTGTGGGTCAGTCATCAGTGTTGTAGGTGAAATAGAAAGTCTGGATAAAATAGTATGCTTGGTTATTTGGTTCGATGGTTTTTCTACAAGTTTTCGTGTATGAACTTAGTGCCAATGCATACATTATCCGCTGAGTGACCTTCTTAGATGTGATTATACTGTGATATTGAATTACAGATTGGTTCTGGATTTTTAAATAGTATTTTTGCATTATACAAGAAGAAGATAGAACATGGATTGAGTTCAGGGTATGGCATCCCTTCTGATCTAAGTTGGCAGCTGACATTCTTGGTGGTGTTGATAACATTTGGATTGTAAGTATTTAATGCAAGAGTACTGTTCACACTTTTTTTTTATGTGGGTGTTTGTTATTCCTGACTGGTGTGATCTCATTTTCTGTTTAATTGCAGCAACCTGGAGCCAAGGTCTTGTATCTTGGTGCTGCTTCTGGAACAATTGTCTCTCTTGTCTCTGATCTTGTTGGCCCTGTAAGTTGCATGGGTATTATGGAGTAACTGAGAAATATGAATTCTTATCGTGGAGTTGATTTGATCGATATTCTCTTTGCAGGAGGGATGCATTTATGCAGTTGAATTTTCACACAGGAGTGGTAGAGATTTAGTTAACATGGCAAAGAAAAGAACAAATGTCATCCCGATCACTGAAGATGCTAGGCATCCTGCAAAGCACAGAATGTTGGTTGGCATGGTTGATGTTATCTTTTTCGATGTTGCCCAGCCTGATCAGGTATTGTTTCTTTTGTCGAATTTAGCTGGCTTTACATCATGATTTTTAGTTGGATTTTCTTTTGACATCTGTTTTCTTCCTTATTTTAGGGAGTATACATTGTTTTTATCATATGGGTTAGTGTAAAGTTGGGGTGGCTATCTGATACACCAAGCTTGTTTTCAACTTATTTATTATTTATCCGGTCTAATATTTGATATACAATTATATACATGGAAAATGGAAAGGAAATTGCCTTATTTAGCTTATTTAGTTTATTGATAACTTGTCATATCACATGAAACCATTTTCTGCCTTCTTTCATCTGAAGGTTGATGGAAACGTGAAGTAAGACTTGTGGCTTTAAGCATAAAACACTCTAGAGCAACTATTTTCTCCATTCAATATGCTACTTCGTATTTCTCATGCTTGCAATGCTGCTGTAAAGAGTTATAAAGCTTATTTTTTATATTATTGTTTTACATCATGGATTCGTAAAAACTAATTTGGCAGCCTTATACATACATCAACAACAAGAAAAGATAGGCCTGCTTGCAGTAAATTTATTGACGTCCTGATCCGGTTCTCATAAATTCAACAAACCCGTTGATATATAGTTCCTCTTGCAGCTTATGATCGCCAAAGATTTATGCAGCCTGCCTAGCTCAAGCCTTAATCTTCTGTGCTTCATCTCCCGCCATGGCTTGTCTCAGTGCGGAAACGTTGAGCTGTGGCACCCACCTAAGGCACACGATCCCCTTTCCTGATGTCCTATTCACAAAGCCTGGCGGTAAAGCCCATATGAAAGGCAACTGCGCAAGCTCTAGGCCATAAGAAATCTCATAAACTTCATCTTTAGTGAGTTTATACTCACTGCCAAACCCTATATAGATAACTGATCTAGGGCTCTGTTGATCAAGCCATTTGAAGTCTTCAATCCATGTTTCATCTGTGTTTTCTTCTTTCTTTACTTTGGGTGGTGAGAGCAGGCCAACTGGCACCACAGGCTTGTTAATGAGCATCTGATAAAGCTCGATATATTCACCTTCGAACTCTTTGCATCTTCGTACTCCTACTGCATCACCAAACTTGTTTTTAACTTGTTATTTATGTAGTGTTTCTGATTTTTTACTTGACTTGAGAGTTGAGACTTTTTTAATTGTGTTGGACATATTTTTAATTGTATCATATTTACGGAGTAGTATACTTGGTGTTTCTTTTCTTCGTTTTTATTGTGTTTTGATTAGGAGACCAAAATGCATCGCTTTTAGCCTTTTACCGATGGGCATCGCGCGCGGTCCGATCCTAGTTATACTAAAAGAGAGGAAATCAATGTGGTGATGACAAATGTCACTCATTGATTGGCCTCTCTTATAGGTATTACAAAAAATTATAAAATAAAATAAAATAATTGATTCTATAATTAATTGTTAACTTTTACCTCAAACAAATATTTGATTTTCTTTTCCTCAAAATNGCCTTTTACCGATGGGCATCGCGCGCGGTCCGATCCTAGTTATACTAAAAGAGAGGAAATCAATGTGGTGATGACAAATGCCACTCATTGATTGGCCTCTCTTATAGGTATTACAAAAAATTATAAAATAAAATAAAATAATTGATTCTATAATTAATTGTTAACTTTTACCTCAAACAAATATTTGATTTTCTTTTCCTCAAAATNTGATTCTATAATTAATTGTTAACTTTTACCTCAAACAAATATTTGATTTTCTTTTCCTCAAAATTTTAAAAAAAAATCATTCTATAAATAAGGAATATTTTTTAAAATTATATATCTTTTCTATATTTGGTAACAAATATAACCAATATAAGTTTATATTTTTATATAAAAAAAAAATTAATCCATTATACGGAGTACGTAGTAAGATTTTTAGAAAAATTTAAGAGTAGTCTACTTATTTGTATTTCGTATTTACATAATTCAAATACAAATAAATTAGAAAATCAATCAAGTATTAATAAGAGTGNTAATTCAAATACAAATAAATTAGAAAATCAATCAAGTATTAATAAGAGTGTATAAAAAATTACAATAGTACTCTATAATATTTTAACAACTAAATGCGATAATTATAACCGTCATTGATTGTACTATTTTATACGTAATATATTTAGCCACTAAATTTGATATTTATCACCGTCATCGATAGTAATATTTGACTACTTTAAAAAATATTATATAACTTCGTTAAACATGAGAAAAACTTGTGTACTATCTATCTACTACTTTACTACGTAATTCCTAAATTTTTTAGATGCGGCTATTTAATTTTAACACTAGCTGTTATATTCACACATACCTATACCTTTTCTGTTTTTTGGTGATTATTACTACTTTATGATAAACATAGTCATGTCTCCGTAGCATTTTGTTGAATTTGTCTAAATACTTACATGATACTACTTTTTAATAATTTTTACTAATCGATAATTTAATTAAGATATTAATAGTTGAAGTTATTTACTAATAACCGTGAAAATAAAACTGATTTATCCAAAAAAATGGAAGAAGGTGTAAACAAGAAAAATGATGAGCGACTACGTAGTCCTCTCAACTTAAAAAAGCTCCTCTAAATATTTTAGGCTAATCAATTGACTTACTCCATATATTTTAGCCGATTTTTAACAAACGTATGTATACGGAGTACTATACTAAAAGTGAGGCAAATTGATATGGAGATGACAAATACAACTCTTTTTGCCTCTTTTATAATATTGGTAAATAACCTATGATAAAATAATTAATATACTTTGTATATATTTTACCTAAAATCTCTAATTACTTATGGTAATAATCGATTATACTACGAATTACTTATTTACTCATGTTAATAAATTTCTTAATTTTAAATCTATATACTCTGTACTATACTAAAAGAGAGGCAAATGGATGTAGAGATGACAAATGTCTCTCTTTGATTTGCCTTTCTTATAACATAAATGATGACTAATTTGTAAGTACTATCAAGTTTCGTTTAGAAACTGTGTCATATATTGAGTACGAATATGTTCAAACGTTCCTTTGATCGGTTATTATTTGTAATCTAATGAAAAATCTTCGCATACAATTCTTGATAACCGATATGGAAAATCTTATAATAGTTTAACTTGGACTATCAATTATATTATTGTAATACTATCAACTTTTTAAAAATTTGTGTCATATAATGAATACGAATTTCACAACAAAAGTTAACTATTGATTTAATGTATTTAGCAAGGTCGTCTCAAACATTTTATAGGCCCTTTGTTAACTAACAAAATGAGCCCCTAGCCATATACTTTGTTTCGTACGAAACATATACTTAATCTTAAATATCAAAAATAACTTTGCCACATTCTCATTATCGTAATATTTTTATATGGAGCACGGATAATAATTTATTCGTTCATATTATTGAAATGTTAAGAGCATGTTGATTGAAATTTTGATTAATATATCGTAATCAACTATATCCAAAGTCATAAGATCTAGATAATTAAGTTTCCTTATTATTACTCCCTCCGTCCCTTAATACTCGACTTATTTTGACCGGACACATTTGCCAATGCATAACTTTGACCACCAATTTCTTTAACTGCATGTTATAAAATTTATAAGAATATTAATATTTTGAAAATATATATTAATATGAAGCCAACAATATATTATATACTAACATTTGTTTTCATATACTAGAAATAAAACGAGGTCAAAGTGAATTATGTGAATATTGCAAAAAGTCAAAACAGGTCGAGTATTAAGGGACGGAGGTAGTAATATGTTTGCAATAACAAAATACTTTTTATATATTAATGTGAATGATTTCAATATCACTTTAATATTTCGTGCAAAATAAAATTTATATATGTAAATGGTGAATCACATTTGATGATGGGGTGACTTTGGATTTTAGATTGATCTGAGGACAAAGTTAAACGTAGATGATTGACTAATGTTGACTAACAAAAAGAGATTTTGGTGGATGGGTATAAGGATAACATGTACCCACCTTGGTGATGGGGCGAGTTTGAATTGATCGGATTTGAGAATACTCACACAATCCTAATTATGTATGTCACTTTTAAATATTTTTTTCAATATTATAGCTAATACAATCAATTTTGATAGTTTGTAATAAACTTATGTCACTATATTTAAAATTTAGTTGAAAGAATAATTGGATTTTTATGGAACATAGTGATGTCAGAGTGTCAGTTGGCGAGGTTTTGGGAGATCCCCCGGTGCATCCGCCCCAAGTGGGTGGCGATGGAGGAAAGTTTATTGGGTGATGGGGTTAAAAAATATAATTGTCGCGGGTGAAGGGGTGATTTTGGATTTTAGATTGGACCCGCCTAAGTCGTTAATATTTCATCTGATTGATTATGAATATATAAAAAAAATGTACTATTAACGTATAATGTTTTGCTTATTTACTCAGTAACACTAATTAGACAAAGAATTTTCAGATGCTCTATAATAGATTTTAAAATTCAAAACTCTTTTACCAAAAAAAAAAAAAAACGAGTCTAGGGGTGGGTGTGGATACACGGGAAGGGAGGTAATGAAGAGGGGGTGAATTTTATTTTGTACCTCTCGAGACGGGGGATCGGGAGGAGTGGGTATCGTTCCAATCGTAGATGGAGGGGATGAAGATGAGAATTATAGGCGGGTGCGGGTGTGCAGGCTCTGTTCCATCTCAAAGTTATCTCTAACTCAATAAAGGAAATGGTCTAGATAGGTGTTAAGTGATCGGGTAATGAGGTTGACGGGATGACTGTGCGAGTATTAAGTGGGTATTACTATCGAAGTGAAGGGCGGGTGAGATAACATGATGTTAGACACAAATACTGGTGAATGAGAATGAAAATAATTTTATCTATGTACCCTTATTTGTTTTAATTGCTTAAGACACCGAATGAGCAATAACAAATTTATCCATCGTTAATTATTTTTTATTTGGAGAATATCTATAAACTCTATTTTAATGATAATTGTATACCAGATTTCATATAAATTTATATTTAGGTTATAAATCGTGCATCACACGAGTACTATATTAGTCATTTTCTAAATACTAAGTACACCGGGTGAGGTAGAAAGTTAAAACCAGAAACAAAGGCGAAAAGCCGAAGAATCGATCACATGATAAAAACTTCCGTAAGGACAAAATTGGGGCCATGTTATTAGTGAAAAATGGAAATCGAATCTCATAATTATGAATATCAATAGCATATCGTATTATCATGGATATTCATGGACCACTTCATGGCTTTAAGTCCCACAAATTTTAAGTGGCAAAAATCGATCCAATTATAAATTGATACCTTCCAAGATATATAGAAATAAATTAATATGAGCACGTAGATTTGAGATTGAGCCCTTAAAATACAACTCTTTAATTTCGTATGTCTCTGAAGGTGTCTTTTTTGGTTTTTGTTAGAGATAATATTTCATTTTAATTAGACTAAATGCAACTTAAAATACTATCACATCTCAATCTTTAGTTTCGTTATTTAGAGCTTTGGCACAATTTAATTACTAACTAGTTTTTTAGCCCTAGCGATGCCCCGGATTCCTACATTGATAGCATTCACAATTACTTATATATTTTATTTTGTGATAACAATAGTTTAGTGGTAAAAGATTTATTGTTTAAACACAAGGTGTAAGGTTCAAACCTTCACGTTTGACATTTTTTTTTTTTTATGTATGTGAAGATTACATGGAACGAAAGATCCATAAACAGAGCACCATATGTTATGTATATTTTTTTATAGACGCTTTTTAATATATAGTATAGAAGTCCATGCCCTTTGTAAGACCCCCTTCCAAGTTCCTCGCAAGTGCCCCAACCCAAAAGAAAAGAGGGTAAAGGCATTAAATTAGAGTGAGAAAGAATGATAAGAAATGGAGCCAATTTCAACTGTGAAGAAATAGAGGGGCAGCTGCTTACATGACTTGATGACTATACTCAAAAGAAATAAAGTGCCCCAACTCTTTCATTTTCCTATATCAAATTAAGCTTGTCTATCTCAACTAATTCAATTCCCATTTTTAGTTATTGTATGTAAACCCTTGACCTTACAAGGATCAAGTAATGTAGTAAGTTGCACTCCCTGGAGAAGAGGGACGATTGAACATTTTACCTCCAAGATGCTCTCCTATGTCAATATCAGTCGTTAATTTATCACTCACTAGGAGGTCTAGGAGTACGTTTTTACAAATCCTAATTATTATGTAGTATACCACACACTGTACTGAAACCCTTCAAAGTTGATGGATATATCCATGAGTTGATATGTATACTTGGGTCGGGTTGACGGGTATCAAGTGGGGCGGGTACAGATGGGGCGGGACAAGCCGGGATGGGGTGGGTCCAACACACAATCCACACCTGCCCAATCACTCATGACGAGTATAATTTTTATACCCATCCGGGCCATCCCCCCTTCACCCGCCAAACCTCCCCCATCCCAGCCTATTNAATATCAGTCGTTAATTTATCACTCACTAGGAGGTCTAGGAGTACGTTTTTACAAATCCTAATTATTATGTAGTATACCACACACTGTACTGAAACCCTTCAAAGTTGATGGATATATCCATGAGTTGATATGTATACTTGGGTCGGGTTGACGGGTATCAAGTGGGGCGGGTACAGATGGGGCGGGACAAGCCGGGATGGGGTGGGTCCAACACACAATCCACACCTGCCCAATCACTCATGACGAGTATAATTTTTATACCCATCCGGGCCATCCCCCCTTCACCCGCCAAACCTCCCCCATCCCAGCCTATTGAGGCGGATGCGGGACGAGTCTCCCATAAAACGCGCTCCACTGACATCCTTAGTCAACCCACTAATCATAGTATTCTTTAGGTATATTTCCGTCAAAAATAGATACTTGTATGACAAATGATATTAAACAAATCATAACTAAAATAAAAAGCAACCTCTACACAATGTCAACAATCTATCACCTTCTCTTGATTTCAATGGCTTCCTCGCCCCTCGTCATCCACCGGTGAATGTGGTTAACAATCCTGACGACGGTCCGGTGCCAATGGAATATTCCCCCGTCTCATTGCAGGAGCACTCTTCTGGTTCAATGGTTGATTCCACTTGTTCGTATGAATCGCCTGCGGTAGTGAGCAGAGGAAAATCACCCTTGAAGTTAGCTTTGTCAAGGAAGGGAGATCGAGTGTGGAAATGGGTCAAAAACATTTGCCCTGCAAAGCGTAAGTTGTCTTGTGAGAATGGGGTTGATCGTCAGATTGGGGTGAAGAACAAGGAGGGAGACTCATGTTTGTGTTGTCCGTTTTTGTTTCCTTTGAAGAAAAAGGCAGTGCTCCTCGGGTTCTGTTTCGGTGAGGAAAAGCCCTTATGTGGGACCTGGTTCAGGTGA

mRNA sequence

ATGTCTAAGTGTACTGTTGCTGGATCGGAAACTGGATGTGAGGTTATATGGTTAAGCAACTTTCCTACAGTTGCCTCTGATGCTGGAGAAATGCAGATAAACAGTATTTTTGCATTATACAAGAAGAAGATAGAACATGGATTGAGTTCAGGGTATGGCATCCCTTCTGATCTAAGTTGGCAGCTGACATTCTTGGTGCAACCTGGAGCCAAGGTCTTGTATCTTGGTGCTGCTTCTGGAACAATTGTCTCTCTTGTCTCTGATCTTGTTGGCCCTGAGGGATGCATTTATGCAGTTGAATTTTCACACAGGAGTGGTAGAGATTTAGTTAACATGGCAAAGAAAAGAACAAATGTCATCCCGATCACTGAAGATGCTAGGCATCCTGCAAAGCACAGAATGTTGGTTGGCATGGTTGATGTTATCTTTTTCGATGTTGCCCAGCCTGATCAGCAACCTCTACACAATGTCAACAATCTATCACCTTCTCTTGATTTCAATGGCTTCCTCGCCCCTCGTCATCCACCGGTGAATGTGGTTAACAATCCTGACGACGGTCCGGTGCCAATGGAATATTCCCCCGTCTCATTGCAGGAGCACTCTTCTGGTTCAATGGTTGATTCCACTTGTTCGTATGAATCGCCTGCGGTAGTGAGCAGAGGAAAATCACCCTTGAAGTTAGCTTTGTCAAGGAAGGGAGATCGAGTGTGGAAATGGGTCAAAAACATTTGCCCTGCAAAGCGTAAGTTGTCTTGTGAGAATGGGGTTGATCGTCAGATTGGGGTGAAGAACAAGGAGGGAGACTCATGTTTGTGTTGTCCGTTTTTGTTTCCTTTGAAGAAAAAGGCAGTGCTCCTCGGGTTCTGTTTCGGTGAGGAAAAGCCCTTATGTGGGACCTGGTTCAGGTGA

Coding sequence (CDS)

ATGTCTAAGTGTACTGTTGCTGGATCGGAAACTGGATGTGAGGTTATATGGTTAAGCAACTTTCCTACAGTTGCCTCTGATGCTGGAGAAATGCAGATAAACAGTATTTTTGCATTATACAAGAAGAAGATAGAACATGGATTGAGTTCAGGGTATGGCATCCCTTCTGATCTAAGTTGGCAGCTGACATTCTTGGTGCAACCTGGAGCCAAGGTCTTGTATCTTGGTGCTGCTTCTGGAACAATTGTCTCTCTTGTCTCTGATCTTGTTGGCCCTGAGGGATGCATTTATGCAGTTGAATTTTCACACAGGAGTGGTAGAGATTTAGTTAACATGGCAAAGAAAAGAACAAATGTCATCCCGATCACTGAAGATGCTAGGCATCCTGCAAAGCACAGAATGTTGGTTGGCATGGTTGATGTTATCTTTTTCGATGTTGCCCAGCCTGATCAGCAACCTCTACACAATGTCAACAATCTATCACCTTCTCTTGATTTCAATGGCTTCCTCGCCCCTCGTCATCCACCGGTGAATGTGGTTAACAATCCTGACGACGGTCCGGTGCCAATGGAATATTCCCCCGTCTCATTGCAGGAGCACTCTTCTGGTTCAATGGTTGATTCCACTTGTTCGTATGAATCGCCTGCGGTAGTGAGCAGAGGAAAATCACCCTTGAAGTTAGCTTTGTCAAGGAAGGGAGATCGAGTGTGGAAATGGGTCAAAAACATTTGCCCTGCAAAGCGTAAGTTGTCTTGTGAGAATGGGGTTGATCGTCAGATTGGGGTGAAGAACAAGGAGGGAGACTCATGTTTGTGTTGTCCGTTTTTGTTTCCTTTGAAGAAAAAGGCAGTGCTCCTCGGGTTCTGTTTCGGTGAGGAAAAGCCCTTATGTGGGACCTGGTTCAGGTGA

Protein sequence

MSKCTVAGSETGCEVIWLSNFPTVASDAGEMQINSIFALYKKKIEHGLSSGYGIPSDLSWQLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITEDARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNNLSPSLDFNGFLAPRHPPVNVVNNPDDGPVPMEYSPVSLQEHSSGSMVDSTCSYESPAVVSRGKSPLKLALSRKGDRVWKWVKNICPAKRKLSCENGVDRQIGVKNKEGDSCLCCPFLFPLKKKAVLLGFCFGEEKPLCGTWFR

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo09351	Spo09351	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo09351.1	Spo09351.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09351.1.exon.1	Spo09351.1.exon.1	exon
Spo09351.1.exon.2	Spo09351.1.exon.2	exon
Spo09351.1.exon.3	Spo09351.1.exon.3	exon
Spo09351.1.exon.4	Spo09351.1.exon.4	exon
Spo09351.1.exon.5	Spo09351.1.exon.5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09351.1.CDS.1	Spo09351.1.CDS.1	CDS
Spo09351.1.CDS.2	Spo09351.1.CDS.2	CDS
Spo09351.1.CDS.3	Spo09351.1.CDS.3	CDS
Spo09351.1.CDS.4	Spo09351.1.CDS.4	CDS
Spo09351.1.CDS.5	Spo09351.1.CDS.5	CDS

Homology

[Close]

BLAST of Spo09351.1 vs. NCBI nr
Match: gi|902183174|gb|KNA10070.1| (hypothetical protein SOVF_147810 isoform C [Spinacia oleracea])

HSP 1 Score: 235.0 bits (598), Expect = 1.800e-58
Identity = 126/159 (79.25%), Postives = 130/159 (81.76%), Query Frame = 1

		  
Query: 1   MSKCTVAGSETGCEVIWLSNFPTVASDAGEMQINSIFALYKKKIEHGLSSGYGIPSDLSW 60
           MSKCTVAGSETGCEVIWL+NFPTVASDAGEMQIN    L    I  G+        D  W
Sbjct: 116 MSKCTVAGSETGCEVIWLNNFPTVASDAGEMQINRY--LMSADILGGV--------DNIW 175

Query: 61  QLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 120
                +QPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI
Sbjct: 176 -----IQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 235

Query: 121 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNN 160
           PITEDARHPAKHRMLVGMVDVIFFDVAQPD QP   +NN
Sbjct: 236 PITEDARHPAKHRMLVGMVDVIFFDVAQPD-QPYTYINN 258

[Close]

BLAST of Spo09351.1 vs. NCBI nr
Match: gi|902183173|gb|KNA10069.1| (hypothetical protein SOVF_147810 isoform B [Spinacia oleracea])

HSP 1 Score: 233.0 bits (593), Expect = 6.700e-58
Identity = 123/151 (81.46%), Postives = 126/151 (83.44%), Query Frame = 1

		  
Query: 1   MSKCTVAGSETGCEVIWLSNFPTVASDAGEMQINSIFALYKKKIEHGLSSGYGIPSDLSW 60
           MSKCTVAGSETGCEVIWL+NFPTVASDAGEMQIN    L    I  G+        D  W
Sbjct: 116 MSKCTVAGSETGCEVIWLNNFPTVASDAGEMQINRY--LMSADILGGV--------DNIW 175

Query: 61  QLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 120
                +QPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI
Sbjct: 176 -----IQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 235

Query: 121 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ 152
           PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ
Sbjct: 236 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ 251

[Close]

BLAST of Spo09351.1 vs. NCBI nr
Match: gi|902236242|gb|KNA24281.1| (hypothetical protein SOVF_016890 [Spinacia oleracea])

HSP 1 Score: 163.3 bits (412), Expect = 6.600e-37
Identity = 80/93 (86.02%), Postives = 85/93 (91.40%), Query Frame = 1

		  
Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           +QPGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 151 IQPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 210

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 211 ARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 243

[Close]

BLAST of Spo09351.1 vs. NCBI nr
Match: gi|6003681|gb|AAF00542.1| (fibrillarin homolog [Arabidopsis thaliana])

HSP 1 Score: 162.9 bits (411), Expect = 8.600e-37
Identity = 82/106 (77.36%), Postives = 89/106 (83.96%), Query Frame = 1

		  
Query: 53  GIPSDLSWQLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNM 112
           G+  D  W     ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNM
Sbjct: 135 GVDLDNIW-----IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNM 194

Query: 113 AKKRTNVIPITEDARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           AKKRTNVIPI EDARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 195 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 235

[Close]

BLAST of Spo09351.1 vs. NCBI nr
Match: gi|297792583|ref|XP_002864176.1| (hypothetical protein ARALYDRAFT_495317 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 162.5 bits (410), Expect = 1.100e-36
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 1

		  
Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 140 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 199

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 200 ARHPAKYRMLVGMVDVIFSDVAQPDQARILGLN 232

[Close]

BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QS47_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_147810 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.200e-58
Identity = 126/159 (79.25%), Postives = 130/159 (81.76%), Query Frame = 1

		  
Query: 1   MSKCTVAGSETGCEVIWLSNFPTVASDAGEMQINSIFALYKKKIEHGLSSGYGIPSDLSW 60
           MSKCTVAGSETGCEVIWL+NFPTVASDAGEMQIN    L    I  G+        D  W
Sbjct: 116 MSKCTVAGSETGCEVIWLNNFPTVASDAGEMQINRY--LMSADILGGV--------DNIW 175

Query: 61  QLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 120
                +QPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI
Sbjct: 176 -----IQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 235

Query: 121 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNN 160
           PITEDARHPAKHRMLVGMVDVIFFDVAQPD QP   +NN
Sbjct: 236 PITEDARHPAKHRMLVGMVDVIFFDVAQPD-QPYTYINN 258

[Close]

BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QS27_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_147810 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 4.700e-58
Identity = 123/151 (81.46%), Postives = 126/151 (83.44%), Query Frame = 1

		  
Query: 1   MSKCTVAGSETGCEVIWLSNFPTVASDAGEMQINSIFALYKKKIEHGLSSGYGIPSDLSW 60
           MSKCTVAGSETGCEVIWL+NFPTVASDAGEMQIN    L    I  G+        D  W
Sbjct: 116 MSKCTVAGSETGCEVIWLNNFPTVASDAGEMQINRY--LMSADILGGV--------DNIW 175

Query: 61  QLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 120
                +QPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI
Sbjct: 176 -----IQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 235

Query: 121 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ 152
           PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ
Sbjct: 236 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ 251

[Close]

BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RXN3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_016890 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.600e-37
Identity = 80/93 (86.02%), Postives = 85/93 (91.40%), Query Frame = 1

		  
Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           +QPGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 151 IQPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 210

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 211 ARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 243

[Close]

BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Match: D7MS52_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495317 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.800e-37
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 1

		  
Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 140 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 199

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 200 ARHPAKYRMLVGMVDVIFSDVAQPDQARILGLN 232

[Close]

BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Match: V4P5H1_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10025746mg PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.300e-36
Identity = 88/127 (69.29%), Postives = 99/127 (77.95%), Query Frame = 1

		  
Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 152 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 211

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNNLSPSLDFNGFL-APRHPPVNVVNNPD 185
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +        +L+ N FL +  H  +++  N  
Sbjct: 212 ARHPAKYRMLVGMVDVIFSDVAQPDQARI-------LALNANFFLKSGGHFVISIKANCI 271

Query: 186 DGPVPME 192
           D  VP E
Sbjct: 272 DSTVPAE 271

[Close]

BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Match: MD36B_ARATH (Probable mediator of RNA polymerase II transcription subunit 36b OS=Arabidopsis thaliana GN=MED36B PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.200e-38
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 1

		  
Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 141 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 200

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 201 ARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 233

[Close]

BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Match: MD36A_ARATH (Mediator of RNA polymerase II transcription subunit 36a OS=Arabidopsis thaliana GN=MED36A PE=1 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 2.700e-38
Identity = 88/126 (69.84%), Postives = 97/126 (76.98%), Query Frame = 1

		  
Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 152 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 211

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNNLSPSLDFNGFLAPRHPPVNVVNNPDD 185
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  + N S  L   G     H  +++  N  D
Sbjct: 212 ARHPAKYRMLVGMVDVIFSDVAQPDQARILAL-NASYFLKSGG-----HFVISIKANCID 271

Query: 186 GPVPME 192
             VP E
Sbjct: 272 STVPAE 271

[Close]

BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Match: FBRL_RAT (rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus GN=Fbl PE=1 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 1.000e-34
Identity = 69/93 (74.19%), Postives = 82/93 (88.17%), Query Frame = 1

		  
Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSD+VGP+G +YAVEFSHRSGRDL+N+AKKRTN+IP+ ED
Sbjct: 163 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIED 222

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHP K+RML+ MVDVIF DVAQPDQ  +  +N
Sbjct: 223 ARHPHKYRMLIAMVDVIFADVAQPDQTRIVALN 255

[Close]

BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Match: FBRL_MOUSE (rRNA 2'-O-methyltransferase fibrillarin OS=Mus musculus GN=Fbl PE=1 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 1.000e-34
Identity = 69/93 (74.19%), Postives = 82/93 (88.17%), Query Frame = 1

		  
Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSD+VGP+G +YAVEFSHRSGRDL+N+AKKRTN+IP+ ED
Sbjct: 163 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIED 222

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHP K+RML+ MVDVIF DVAQPDQ  +  +N
Sbjct: 223 ARHPHKYRMLIAMVDVIFADVAQPDQTRIVALN 255

[Close]

BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Match: FBRL_HUMAN (rRNA 2'-O-methyltransferase fibrillarin OS=Homo sapiens GN=FBL PE=1 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 1.000e-34
Identity = 69/93 (74.19%), Postives = 82/93 (88.17%), Query Frame = 1

		  
Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSD+VGP+G +YAVEFSHRSGRDL+N+AKKRTN+IP+ ED
Sbjct: 157 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIED 216

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHP K+RML+ MVDVIF DVAQPDQ  +  +N
Sbjct: 217 ARHPHKYRMLIAMVDVIFADVAQPDQTRIVALN 249

[Close]

BLAST of Spo09351.1 vs. TAIR (Arabidopsis)
Match: AT5G52470.1 (fibrillarin 1)

HSP 1 Score: 161.8 bits (408), Expect = 6.700e-40
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 1

		  
Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 141 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 200

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 201 ARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 233

[Close]

BLAST of Spo09351.1 vs. TAIR (Arabidopsis)
Match: AT4G25630.1 (fibrillarin 2)

HSP 1 Score: 160.6 bits (405), Expect = 1.500e-39
Identity = 88/126 (69.84%), Postives = 97/126 (76.98%), Query Frame = 1

		  
Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 152 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 211

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNNLSPSLDFNGFLAPRHPPVNVVNNPDD 185
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  + N S  L   G     H  +++  N  D
Sbjct: 212 ARHPAKYRMLVGMVDVIFSDVAQPDQARILAL-NASYFLKSGG-----HFVISIKANCID 271

Query: 186 GPVPME 192
             VP E
Sbjct: 272 STVPAE 271

[Close]

BLAST of Spo09351.1 vs. TAIR (Arabidopsis)
Match: AT5G52490.1 (Fibrillarin family protein)

HSP 1 Score: 132.1 bits (331), Expect = 5.700e-31
Identity = 63/93 (67.74%), Postives = 77/93 (82.80%), Query Frame = 1

		  
Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PG KVLYLGA+SG  VS VSD+VGPEGC+YAVE S   G+ L+NMA+KRTNVIPI ED
Sbjct: 131 IKPGVKVLYLGASSGYTVSHVSDIVGPEGCVYAVEHSDICGKVLMNMAEKRTNVIPIIED 190

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVD+IF DV  P+Q  + ++N
Sbjct: 191 ARHPAKYRMLVGMVDIIFSDVNHPEQANILSLN 223

The following BLAST results are available for this feature:

BLAST of Spo09351.1 vs. NCBI nr
BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
BLAST of Spo09351.1 vs. TAIR (Arabidopsis)

BLAST of Spo09351.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902183174\|gb\|KNA10070.1\|	1.8e-58	79.2	hypothetical protein SOVF_1478...	[more]
gi\|902183173\|gb\|KNA10069.1\|	6.7e-58	81.4	hypothetical protein SOVF_1478...	[more]
gi\|902236242\|gb\|KNA24281.1\|	6.6e-37	86.0	hypothetical protein SOVF_0168...	[more]
gi\|6003681\|gb\|AAF00542.1\|	8.6e-37	77.3	fibrillarin homolog [Arabidops...	[more]
gi\|297792583\|ref\|XP_002864176.1\|	1.1e-36	84.9	hypothetical protein ARALYDRAF...	[more]

BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QS47_SPIOL	1.2e-58	79.2	Uncharacterized protein OS=Spi...	[more]
A0A0K9QS27_SPIOL	4.7e-58	81.4	Uncharacterized protein OS=Spi...	[more]
A0A0K9RXN3_SPIOL	4.6e-37	86.0	Uncharacterized protein OS=Spi...	[more]
D7MS52_ARALL	7.8e-37	84.9	Putative uncharacterized prote...	[more]
V4P5H1_EUTSA	1.3e-36	69.2	Uncharacterized protein OS=Eut...	[more]

BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
MD36B_ARATH	1.2e-38	84.9	Probable mediator of RNA polym...	[more]
MD36A_ARATH	2.7e-38	69.8	Mediator of RNA polymerase II ...	[more]
FBRL_RAT	1.0e-34	74.1	rRNA 2'-O-methyltransferase fi...	[more]
FBRL_MOUSE	1.0e-34	74.1	rRNA 2'-O-methyltransferase fi...	[more]
FBRL_HUMAN	1.0e-34	74.1	rRNA 2'-O-methyltransferase fi...	[more]

BLAST of Spo09351.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT5G52470.1	6.7e-40	84.9	fibrillarin 1	[more]
AT4G25630.1	1.5e-39	69.8	fibrillarin 2	[more]
AT5G52490.1	5.7e-31	67.7	Fibrillarin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000692	Fibrillarin	PRINTS	PR00052	FIBRILLARIN	coord: 69..90 score: 1.1E-33coord: 119..148 score: 1.1E-33coord: 94..111 score: 1.1
IPR000692	Fibrillarin	PFAM	PF01269	Fibrillarin	coord: 64..158 score: 1.8
IPR000692	Fibrillarin	SMART	SM01206	Fibrillarin_2	coord: 44..175 score: 2.1
None	No IPR available	PANTHER	PTHR10335	RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN	coord: 67..151 score: 1.4

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0001510	RNA methylation
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0006164	purine nucleotide biosynthetic process
biological_process	GO:0008033	tRNA processing
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0016571	histone methylation
biological_process	GO:0000478	endonucleolytic cleavage involved in rRNA processing
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0016020	membrane
cellular_component	GO:0005730	nucleolus
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0030515	snoRNA binding