Spo09536.1 (mRNA)

Overview
NameSpo09536.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionMog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein
LocationSpoScf_00041 : 1072187 .. 1076662 (+)
Sequence length1202
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTAATTAAGTAATGACTATAAACATTATCCCACATTATCTAAACACCATTCTTCTGGCAATGGCTGCTATCTTCACACTCTCATGGCAGTTCTCCTCCCTTCCTCTGTCCACCACCCACAACCTAAACCTCCTCAAACCCCAAAACCCATTTCTTCTTCACAATTTTCTCTCTCCTCCAACCCCAAAACTCTCTCTTTAACCTCCAATAAGAGAGATTTCCTCTTTCAATCACTCTCTCTTTGCATTGCTTCTCTAATCCTCGAAATCCCAACTCCCATTTCTGCAACGGAAGCTGTTTCTTCATCAAAATCTATTCTTTCGGCCATTTTAAACACGAAATCATGGTTTCAGTTTTTTGGAGCTGGGTTTTCTATCCGTATTCCTCCTGAATTTGTAGATGTTATGGAGCCTGAGGTTTGGATTTTTTAATGTATTTGCAATTTCTTCAACTTTTTTAACAATTCTTGTGATTTTTGACATAAAATCTGCTCAATTTTATGTAAAGAGGGTCTTAATTGGGAAACCCAGATGATTTTGTAATATTATTATTCATTTGTGATTGTAATTGTGGAATGATGTTCTGTTGCAATGTAGTTATGTTTCATGGGTTTTAATAGCGTTGTGTAGGGTAATTATTTGCTGTGTTGTTGAGTGGATGAACTAGTTGTCTTTGGCATAATGAGGAAGTCTGTGTTAATATTCGATACTGATCAATCTGTACTAGAATCAGTGGTATTGTTGAGTTGGCCATTTTATGTTCATGTGTGTGAGATTGATCATTATCGGATTTTAACTTTAGCTTTCTCAAGCTAGACGGTACTTAAAAGGTTGAAACTTATGATGTTTAGCAGAAAGACAGTAATTAAGTTTAAACCCAAGAAATGGAAATGATCAAGGGAATGTGAAATTATACATTTAATGCGAATAGTTATCTTCGTATAGCTAGACATACGAGGTTAGTGCCTAGAATTGTCCTTTTGATAGGCAAATCATTTTGGATGGAGATGGACTGGTGTAGAATGCACATGGGGTGGGAAAGGAGAATTTGGTGTGATGAATTAAAAGATTAGAGGAGTGGTTGGTTGTACACTACTCAAACTACCTTGAGGCGGAAGCTTTATGCGATATAAGGCTCTTGAACACTTCAAATTCGATAGCAATTGATAGGATTCCATGCTAATTTCGATCTTCATTCGACACTTCGAGTAAACCAGGTAATTTTGATAGAGACTGAAGCATATAACTCAAGTAAGGAATGGAGTTGCTCAGTTGTTTGGAACTTTGGAGTATGTCCAATGCATACTGGCGACAAACTGTTCTTTGATATTGGCTTGTATTGCCAAAGGGTAACCCTAATAAGTGTAGCAGGTGCAAAAGGAGTATGATCCTTTAAGAAAGTTTTGTTACCTAGAGTCCTAAATGGTGTTTCTCATGTTAGCGATCCTTTAACCGTAGTTAATGCTTTCTCTCAGCTTGAATGTCAATATTTTTATAATCTTTGTGATGAATACTCTTTTGCATTGTGACTAAGGTTGTGTTTGTGTCATTGAACCACATTTTAATTTCATGGAAAATGTATTTCAAAGGAAATCAAGTTTACTTTTTTCCATTTTTGTTCCTGGATCCCCCTATTTGTTCGTTTACCAGGTTCAGCAGGAAATCATATATAAGCTCTACCAAGGATTGCCAAACATTTGGTATTGAGTTTCCTCCTCCTTTTAGTAACAAAATGAAGCAGAAGTAGGACCAAACGGAGGGTTAGCAGCAAAGCACTTTATTGTCTTTCTCATTCAACTCTATTCCCTTATGGGAGGCTAGGACTCTATGGAAATGGAGGAGAGGGGATGCGAATCCGGTTTAAAAATTTCTGCAGTGAACCAGTTGCCTTTTATTTTAACCATGTAGCAAACAGGTTGTGTCACCCTTAAGTTGGGTTTGTTGTGGGTCAAATGTAGAAATTCAATGATGGAAGCAGAATCCCTATTTGACAATATCTAACTTTATAATGATGCATATCTTTGAGAACTACCCTCCTAATCTGTTGCTTAAGTCATTGAATGATGGAAATTGGAAATCAGTTTTGTGTTCATTCTATGCTTGTCCAAGTTGGATAAGTTTCTTATGGATTACATTCCATGTTTCTTCTTCAGGATTTTAATGCTGGGTTGTCCCTTTATGGAGATAAGGCAAAGACAAAGACATTTGCAGCACGTTTTGCTTCTCCTGATGGGTAAACATAGTGTTTTTGTTCCTCCTTTCTGCATTTGAGTTTTAGTCTTTGCCTATTTGGCAATATCAATCACTTTGATGTCCATCATTATATATGATTTGAGACACCAATAAGTATAGTAACTCTGTAAAAGAGCGTTGTCAGTTTCGCTTTGTAATTGCACTGAGGGGAAACAGCATTCAAATTCACTTTTGATTTGATATTAGTTCTAATTCTGTCTTCAAGCTTATTACTTGCTAGGAATACTAAATTCTTGTGCATGATACAGGTATGAGGTAGTGAGTGTTATTATCAAGCCATCCAACTCGCTGAAAATCACCTTTCTAGAGGTTCGTGTCTTATTTTACTTCATTTATGTCACATATTGTCTAACTAGATAGCTATAAAAAAGACTTAGTTTGCTTGAAGAACAATACCGTCTTTTGTTGATCTCTACTATGACTTCATACTTCCGTCATAGAGTATGGCTACATTCATGTTTCTGTCTGTTTCAAGTTCTGCAATTCAGGCTTGATTCTCTCGTAGATGTTTGTGTTCTGCATTCATGTTAACAATTAACTATGTGCATCCACCTCTTCAAAGCTGGCATTTACTACTATACTAAGCTGCTGGATCACCCATTGGGTCCTCTTTCTATGTCTTTGACTTTGAGAATCATATGTGACCACCAACTTTATAGAATTATAGCTAGCTTTTTTCAAGCTTCTCTAACCTCATTTGTATTGTAATATTGATCCTTTTATCGCCTGTTTTCTCTCCTATGGAATGTATAACTCTCTTGATAATCATTTTCTTAAAACTACAGGCTCAGGATATTACTGATTTAGGCTCTCTGAAAGAAGCAGCAAAGATCTTTATTCCAGGTATGGTTCCCCTCCTTTCTTTTCAAAACAGAATGGGGAATAACTAATCATTTTGTTAATTCATGTCAGACATGCAGCTGTTGCTTGATGTTGTTTTGCTGGTTTACAGCTTCCTGATTTGTTTGATGACTTGTTTTAGATTGTTCTTTAGCTTTTGTCTGGTGTCATGACAGGTGGGTCATCGCTGTACTCTGCACGGACTATTAAAATTAAAGAAGATGAAGGTTTCAGGTAATGATTTAGCAAATTGATGTTTCAGTTAATACGGATACAGAGTACTTAATAAAGCCAAATAATAATGTATCCTTTACTTTCTTTTCCTTTTCATGGCTACATGAAGAAAACACTATAATATCGGAAAAGTAGCTTATTCCTTAACTAGGTAAAGACAGAAAAAAATATTCTCTTGGTGAGTTAATGGCTTGGCATTTTGATTTACACAGTAAGCAAATGAGTTCTCTTGGAATAGCTATTGGTCTCTTGTTGGATTGGATCATCTACTTGTCTAGTGCACATTATTTGTCATTTGAGACTTTTGAAAGTATTGTTTTAGAAGTATCAAGATAGTTTTTGACTCTTCCCTGACTAGAGTAACTGTTTGTCTGATGTTAATTTGTTGTATCTCATGTCGACCAGGACATATTATTTCTACGAGTTTGGCAGAGATGAACAGCGTGTTGCACTTGTAGCTGCCGTTAGTGGCGGGAAGGTATTTTTCTGGTTCTAAACTGTAGAACTCTATGCTTTGAGTCACAAATAAGGAACAGTATACTTGATGTGTCTTGAAAAGTATTGGTGTAGATCTTTCTATATTGTAGTCATTACAAAAGCTTCTTCATCGTCTGTAAATGGGTATACTTGTTGGAATCATTTAAGGACAGAAGTTGATAATATGATGTTTATGTTTATGTTTATGTTTATGTAGGCATTTGTTGCTGGAGCGACTTCCCCAGAGTCCAGGTGGGATAGTGATGGTGTAAAACTCCGCAGTGCTGCCTTATCCATGACGCTGTTGTAGTCACTTATCCCATCATCTTCTTAATATTATAGCTCCATTCATTTTGGTTGGATATTATTACATTTTATTTTTCTTCTTTTCTTCTTTTCCCCTTTTCTTCGGCAGTACAGTAGGTCAGTACCTTACGAGCTGAGCATATTGTAATTGTACATCATATTCAAAACATCAGTAATCAGTATCAGTGTTTCTGTGTTTGCACATCTTGTTCGACTATGTCGTAGAAATTCCGGTACGGCCAAGAAGCCGTGAATTGTAACTTATAACTGAGACTGCGAGTGGTGAAATTACTAGTTATTCTTTCAGTCTGAACAAAGTAAATACTCCTCCATTTTCTTTATCAGAAACTTCCTTCAGATTCTGTTA

mRNA sequence

ACTAATTAAGTAATGACTATAAACATTATCCCACATTATCTAAACACCATTCTTCTGGCAATGGCTGCTATCTTCACACTCTCATGGCAGTTCTCCTCCCTTCCTCTGTCCACCACCCACAACCTAAACCTCCTCAAACCCCAAAACCCATTTCTTCTTCACAATTTTCTCTCTCCTCCAACCCCAAAACTCTCTCTTTAACCTCCAATAAGAGAGATTTCCTCTTTCAATCACTCTCTCTTTGCATTGCTTCTCTAATCCTCGAAATCCCAACTCCCATTTCTGCAACGGAAGCTGTTTCTTCATCAAAATCTATTCTTTCGGCCATTTTAAACACGAAATCATGGTTTCAGTTTTTTGGAGCTGGGTTTTCTATCCGTATTCCTCCTGAATTTGTAGATGTTATGGAGCCTGAGGATTTTAATGCTGGGTTGTCCCTTTATGGAGATAAGGCAAAGACAAAGACATTTGCAGCACGTTTTGCTTCTCCTGATGGGTATGAGGTAGTGAGTGTTATTATCAAGCCATCCAACTCGCTGAAAATCACCTTTCTAGAGGCTCAGGATATTACTGATTTAGGCTCTCTGAAAGAAGCAGCAAAGATCTTTATTCCAGGTGGGTCATCGCTGTACTCTGCACGGACTATTAAAATTAAAGAAGATGAAGGTTTCAGGACATATTATTTCTACGAGTTTGGCAGAGATGAACAGCGTGTTGCACTTGTAGCTGCCGTTAGTGGCGGGAAGGCATTTGTTGCTGGAGCGACTTCCCCAGAGTCCAGGTGGGATAGTGATGGTGTAAAACTCCGCAGTGCTGCCTTATCCATGACGCTGTTGTAGTCACTTATCCCATCATCTTCTTAATATTATAGCTCCATTCATTTTGGTTGGATATTATTACATTTTATTTTTCTTCTTTTCTTCTTTTCCCCTTTTCTTCGGCAGTACAGTAGGTCAGTACCTTACGAGCTGAGCATATTGTAATTGTACATCATATTCAAAACATCAGTAATCAGTATCAGTGTTTCTGTGTTTGCACATCTTGTTCGACTATGTCGTAGAAATTCCGGTACGGCCAAGAAGCCGTGAATTGTAACTTATAACTGAGACTGCGAGTGGTGAAATTACTAGTTATTCTTTCAGTCTGAACAAAGTAAATACTCCTCCATTTTCTTTATCAGAAACTTCCTTCAGATTCTGTTA

Coding sequence (CDS)

ATGGCAGTTCTCCTCCCTTCCTCTGTCCACCACCCACAACCTAAACCTCCTCAAACCCCAAAACCCATTTCTTCTTCACAATTTTCTCTCTCCTCCAACCCCAAAACTCTCTCTTTAACCTCCAATAAGAGAGATTTCCTCTTTCAATCACTCTCTCTTTGCATTGCTTCTCTAATCCTCGAAATCCCAACTCCCATTTCTGCAACGGAAGCTGTTTCTTCATCAAAATCTATTCTTTCGGCCATTTTAAACACGAAATCATGGTTTCAGTTTTTTGGAGCTGGGTTTTCTATCCGTATTCCTCCTGAATTTGTAGATGTTATGGAGCCTGAGGATTTTAATGCTGGGTTGTCCCTTTATGGAGATAAGGCAAAGACAAAGACATTTGCAGCACGTTTTGCTTCTCCTGATGGGTATGAGGTAGTGAGTGTTATTATCAAGCCATCCAACTCGCTGAAAATCACCTTTCTAGAGGCTCAGGATATTACTGATTTAGGCTCTCTGAAAGAAGCAGCAAAGATCTTTATTCCAGGTGGGTCATCGCTGTACTCTGCACGGACTATTAAAATTAAAGAAGATGAAGGTTTCAGGACATATTATTTCTACGAGTTTGGCAGAGATGAACAGCGTGTTGCACTTGTAGCTGCCGTTAGTGGCGGGAAGGCATTTGTTGCTGGAGCGACTTCCCCAGAGTCCAGGTGGGATAGTGATGGTGTAAAACTCCGCAGTGCTGCCTTATCCATGACGCTGTTGTAG

Protein sequence

MAVLLPSSVHHPQPKPPQTPKPISSSQFSLSSNPKTLSLTSNKRDFLFQSLSLCIASLILEIPTPISATEAVSSSKSILSAILNTKSWFQFFGAGFSIRIPPEFVDVMEPEDFNAGLSLYGDKAKTKTFAARFASPDGYEVVSVIIKPSNSLKITFLEAQDITDLGSLKEAAKIFIPGGSSLYSARTIKIKEDEGFRTYYFYEFGRDEQRVALVAAVSGGKAFVAGATSPESRWDSDGVKLRSAALSMTLL
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo09536Spo09536gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo09536.1Spo09536.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo09536.1.exon.1Spo09536.1.exon.1exon
Spo09536.1.exon.2Spo09536.1.exon.2exon
Spo09536.1.exon.3Spo09536.1.exon.3exon
Spo09536.1.exon.4Spo09536.1.exon.4exon
Spo09536.1.exon.5Spo09536.1.exon.5exon
Spo09536.1.exon.6Spo09536.1.exon.6exon
Spo09536.1.exon.7Spo09536.1.exon.7exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo09536.1.utr5p.1Spo09536.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo09536.1.CDS.1Spo09536.1.CDS.1CDS
Spo09536.1.CDS.2Spo09536.1.CDS.2CDS
Spo09536.1.CDS.3Spo09536.1.CDS.3CDS
Spo09536.1.CDS.4Spo09536.1.CDS.4CDS
Spo09536.1.CDS.5Spo09536.1.CDS.5CDS
Spo09536.1.CDS.6Spo09536.1.CDS.6CDS
Spo09536.1.CDS.7Spo09536.1.CDS.7CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo09536.1.utr3p.1Spo09536.1.utr3p.1three_prime_UTR


Homology
[Close]
BLAST of Spo09536.1 vs. NCBI nr
Match: gi|902234873|gb|KNA23625.1| (hypothetical protein SOVF_023410 [Spinacia oleracea])

HSP 1 Score: 481.1 bits (1237), Expect = 1.200e-132
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 1 

		  

Query: 1   MAVLLPSSVHHPQPKPPQTPKPISSSQFSLSSNPKTLSLTSNKRDFLFQSLSLCIASLIL 60
           MAVLLPSSVHHPQPKPPQTPKPISSSQFSLSSNPKTLSLTSNKRDFLFQSLSLCIASLIL
Sbjct: 1   MAVLLPSSVHHPQPKPPQTPKPISSSQFSLSSNPKTLSLTSNKRDFLFQSLSLCIASLIL 60

Query: 61  EIPTPISATEAVSSSKSILSAILNTKSWFQFFGAGFSIRIPPEFVDVMEPEDFNAGLSLY 120
           EIPTPISATEAVSSSKSILSAILNTKSWFQFFGAGFSIRIPPEFVDVMEPEDFNAGLSLY
Sbjct: 61  EIPTPISATEAVSSSKSILSAILNTKSWFQFFGAGFSIRIPPEFVDVMEPEDFNAGLSLY 120

Query: 121 GDKAKTKTFAARFASPDGYEVVSVIIKPSNSLKITFLEAQDITDLGSLKEAAKIFIPGGS 180
           GDKAKTKTFAARFASPDGYEVVSVIIKPSNSLKITFLEAQDITDLGSLKEAAKIFIPGGS
Sbjct: 121 GDKAKTKTFAARFASPDGYEVVSVIIKPSNSLKITFLEAQDITDLGSLKEAAKIFIPGGS 180

Query: 181 SLYSARTIKIKEDEGFRTYYFYEFGRDEQRVALVAAVSGGKAFVAGATSPESRWDSDGVK 240
           SLYSARTIKIKEDEGFRTYYFYEFGRDEQRVALVAAVSGGKAFVAGATSPESRWDSDGVK
Sbjct: 181 SLYSARTIKIKEDEGFRTYYFYEFGRDEQRVALVAAVSGGKAFVAGATSPESRWDSDGVK 240

Query: 241 LRSAALSMTLL 252
           LRSAALSMTLL
Sbjct: 241 LRSAALSMTLL 251
[Close]
BLAST of Spo09536.1 vs. NCBI nr
Match: gi|731328364|ref|XP_010675006.1| (PREDICTED: uncharacterized protein LOC104891056 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 385.6 bits (989), Expect = 6.800e-104
Identity = 206/251 (82.07%), Postives = 219/251 (87.25%), Query Frame = 1 

		  

Query: 1   MAVLLPSSVHHPQPKPPQTPKPISSSQFSLSSNPKTLSLTSNKRDFLFQSLSLCIASLIL 60
           MAVLLPSS+   Q KPPQTPKP SS QFSLSS+P  LSL  NKRDFLFQS+SLCIASLIL
Sbjct: 1   MAVLLPSSLLQ-QHKPPQTPKPTSSPQFSLSSDPIILSLNPNKRDFLFQSISLCIASLIL 60

Query: 61  EIPTPISATEAVSSSKSILSAILNTKSWFQFFGAGFSIRIPPEFVDVMEPEDFNAGLSLY 120
           + P  +SATEA SSSKSI S I NTKSW QF+G GFSIR+PP F DV EPED+NAG SLY
Sbjct: 61  KPPISLSATEAPSSSKSIFSGISNTKSWAQFYGDGFSIRVPPLFEDVNEPEDYNAGASLY 120

Query: 121 GDKAKTKTFAARFASPDGYEVVSVIIKPSNSLKITFLEAQDITDLGSLKEAAKIFIPGGS 180
           GDK K KTFAARF+SPDG+EVVSVIIK  N LKITFLEAQDITDLGSLKEAAKIFIPGGS
Sbjct: 121 GDKVKPKTFAARFSSPDGFEVVSVIIKSCNQLKITFLEAQDITDLGSLKEAAKIFIPGGS 180

Query: 181 SLYSARTIKIKEDEGFRTYYFYEFGRDEQRVALVAAVSGGKAFVAGATSPESRWDSDGVK 240
           SLYSARTIKIKEDEGFRTYYFYEF RDEQ VALVAAVSGGKA VAGAT+PES+WD DGVK
Sbjct: 181 SLYSARTIKIKEDEGFRTYYFYEFSRDEQHVALVAAVSGGKAVVAGATAPESKWDDDGVK 240

Query: 241 LRSAALSMTLL 252
           LRSAALS+TLL
Sbjct: 241 LRSAALSLTLL 250
[Close]
BLAST of Spo09536.1 vs. NCBI nr
Match: gi|802757066|ref|XP_012089111.1| (PREDICTED: uncharacterized protein LOC105647584 [Jatropha curcas])

HSP 1 Score: 323.2 bits (827), Expect = 4.100e-85
Identity = 167/251 (66.53%), Postives = 202/251 (80.48%), Query Frame = 1 

		  

Query: 1   MAVLLPSSVHHPQPKPPQTPKPISSSQFSLSSNPKTLSLTSNKRDFLFQSLSLCIASLIL 60
           MA+L   S+H   PKP Q P  I    F+   +  T   + +KR+F F++ SL +  L  
Sbjct: 1   MAILFFLSLH--PPKPLQNPNTII---FNARKHTCTFLNSVSKREFFFKTTSLGVIYLTT 60

Query: 61  EIPTPISATEAVSSSKSILSAILNTKSWFQFFGAGFSIRIPPEFVDVMEPEDFNAGLSLY 120
           + P   S  E  S SKS+LS I NTKSWFQF+G GF+IR+PP+F D+MEPED+NAGLSLY
Sbjct: 61  QNPLAQSLAETSSPSKSVLSGIANTKSWFQFYGDGFAIRVPPQFEDIMEPEDYNAGLSLY 120

Query: 121 GDKAKTKTFAARFASPDGYEVVSVIIKPSNSLKITFLEAQDITDLGSLKEAAKIFIPGGS 180
           GDKAK KT+AARFASPDGYEV+SV+I+P+N LKITFLEA+DITDLGSLKEAAKIF+PGGS
Sbjct: 121 GDKAKPKTYAARFASPDGYEVLSVVIRPTNQLKITFLEAKDITDLGSLKEAAKIFVPGGS 180

Query: 181 SLYSARTIKIKEDEGFRTYYFYEFGRDEQRVALVAAVSGGKAFVAGATSPESRWDSDGVK 240
           +L+SARTIKIKEDEGFRTYYFYEFGRDEQ  ALVAAV+ GKA +AGAT+P+S+WDSDGVK
Sbjct: 181 TLFSARTIKIKEDEGFRTYYFYEFGRDEQHAALVAAVNSGKAIIAGATAPQSKWDSDGVK 240

Query: 241 LRSAALSMTLL 252
           LRSAA+S+T+L
Sbjct: 241 LRSAAISLTVL 246
[Close]
BLAST of Spo09536.1 vs. NCBI nr
Match: gi|225451044|ref|XP_002284943.1| (PREDICTED: uncharacterized protein LOC100249532 [Vitis vinifera])

HSP 1 Score: 320.1 bits (819), Expect = 3.500e-84
Identity = 165/241 (68.46%), Postives = 195/241 (80.91%), Query Frame = 1 

		  

Query: 12  PQP-KPPQTPKPISSSQFSLSSNPKTLSLTSNKRDFLFQSLSLCIASLILEIPTPISATE 71
           P+P KPPQ P P +         P+ L   S+KRDF+  + SLC  SL    P  I+  +
Sbjct: 10  PRPLKPPQNPNPTTPK-------PRILC-NSSKRDFILNTASLCAFSLSAHYPVAIAFAD 69

Query: 72  AVSSSKSILSAILNTKSWFQFFGAGFSIRIPPEFVDVMEPEDFNAGLSLYGDKAKTKTFA 131
              SSKSILSAI NTK+WFQFFG GFSIR+PPEF D+MEPEDFNAGLSLYGDKAK +TFA
Sbjct: 70  TSPSSKSILSAIANTKTWFQFFGDGFSIRVPPEFEDIMEPEDFNAGLSLYGDKAKPRTFA 129

Query: 132 ARFASPDGYEVVSVIIKPSNSLKITFLEAQDITDLGSLKEAAKIFIPGGSSLYSARTIKI 191
           ARFAS DG EV+SV+I+P+N LKITFLEA+DITDLGSLKEAAKIF+P  ++LYSARTIKI
Sbjct: 130 ARFASSDGSEVLSVVIRPTNQLKITFLEAKDITDLGSLKEAAKIFVPAAATLYSARTIKI 189

Query: 192 KEDEGFRTYYFYEFGRDEQRVALVAAVSGGKAFVAGATSPESRWDSDGVKLRSAALSMTL 251
           KED+GFRTYYFYEFGRDEQ +A+VAAV+GGKAF+AGA +P+ +WD DGVKLRSAA+S+TL
Sbjct: 190 KEDDGFRTYYFYEFGRDEQHLAVVAAVNGGKAFIAGAAAPQFKWDDDGVKLRSAAISLTL 242
[Close]
BLAST of Spo09536.1 vs. NCBI nr
Match: gi|147834367|emb|CAN69845.1| (hypothetical protein VITISV_038348 [Vitis vinifera])

HSP 1 Score: 317.8 bits (813), Expect = 1.700e-83
Identity = 164/241 (68.05%), Postives = 195/241 (80.91%), Query Frame = 1 

		  

Query: 12  PQP-KPPQTPKPISSSQFSLSSNPKTLSLTSNKRDFLFQSLSLCIASLILEIPTPISATE 71
           P+P KPPQ P P +         P+ L   S+KRDF+  + SLC  SL    P  I+  +
Sbjct: 10  PRPLKPPQNPNPTTQK-------PRILC-NSSKRDFILNTASLCAFSLSAHYPFAIAFAD 69

Query: 72  AVSSSKSILSAILNTKSWFQFFGAGFSIRIPPEFVDVMEPEDFNAGLSLYGDKAKTKTFA 131
              SSKSILSAI NTK+WFQFFG GFSIR+PPEF D+MEPEDF+AGLSLYGDKAK +TFA
Sbjct: 70  TSPSSKSILSAIANTKTWFQFFGDGFSIRVPPEFEDIMEPEDFDAGLSLYGDKAKPRTFA 129

Query: 132 ARFASPDGYEVVSVIIKPSNSLKITFLEAQDITDLGSLKEAAKIFIPGGSSLYSARTIKI 191
           ARFAS DG EV+SV+I+P+N LKITFLEA+DITDLGSLKEAAKIF+P  ++LYSARTIKI
Sbjct: 130 ARFASSDGSEVLSVVIRPTNQLKITFLEAKDITDLGSLKEAAKIFVPAAATLYSARTIKI 189

Query: 192 KEDEGFRTYYFYEFGRDEQRVALVAAVSGGKAFVAGATSPESRWDSDGVKLRSAALSMTL 251
           KED+GFRTYYFYEFGRDEQ +A+VAAV+GGKAF+AGA +P+ +WD DGVKLRSAA+S+TL
Sbjct: 190 KEDDGFRTYYFYEFGRDEQHLAVVAAVNGGKAFIAGAAAPQFKWDDDGVKLRSAAISLTL 242
[Close]
BLAST of Spo09536.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RVT4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_023410 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 8.200e-133
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 1 

		  

Query: 1   MAVLLPSSVHHPQPKPPQTPKPISSSQFSLSSNPKTLSLTSNKRDFLFQSLSLCIASLIL 60
           MAVLLPSSVHHPQPKPPQTPKPISSSQFSLSSNPKTLSLTSNKRDFLFQSLSLCIASLIL
Sbjct: 1   MAVLLPSSVHHPQPKPPQTPKPISSSQFSLSSNPKTLSLTSNKRDFLFQSLSLCIASLIL 60

Query: 61  EIPTPISATEAVSSSKSILSAILNTKSWFQFFGAGFSIRIPPEFVDVMEPEDFNAGLSLY 120
           EIPTPISATEAVSSSKSILSAILNTKSWFQFFGAGFSIRIPPEFVDVMEPEDFNAGLSLY
Sbjct: 61  EIPTPISATEAVSSSKSILSAILNTKSWFQFFGAGFSIRIPPEFVDVMEPEDFNAGLSLY 120

Query: 121 GDKAKTKTFAARFASPDGYEVVSVIIKPSNSLKITFLEAQDITDLGSLKEAAKIFIPGGS 180
           GDKAKTKTFAARFASPDGYEVVSVIIKPSNSLKITFLEAQDITDLGSLKEAAKIFIPGGS
Sbjct: 121 GDKAKTKTFAARFASPDGYEVVSVIIKPSNSLKITFLEAQDITDLGSLKEAAKIFIPGGS 180

Query: 181 SLYSARTIKIKEDEGFRTYYFYEFGRDEQRVALVAAVSGGKAFVAGATSPESRWDSDGVK 240
           SLYSARTIKIKEDEGFRTYYFYEFGRDEQRVALVAAVSGGKAFVAGATSPESRWDSDGVK
Sbjct: 181 SLYSARTIKIKEDEGFRTYYFYEFGRDEQRVALVAAVSGGKAFVAGATSPESRWDSDGVK 240

Query: 241 LRSAALSMTLL 252
           LRSAALSMTLL
Sbjct: 241 LRSAALSMTLL 251
[Close]
BLAST of Spo09536.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FCL9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g083410 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 4.700e-104
Identity = 206/251 (82.07%), Postives = 219/251 (87.25%), Query Frame = 1 

		  

Query: 1   MAVLLPSSVHHPQPKPPQTPKPISSSQFSLSSNPKTLSLTSNKRDFLFQSLSLCIASLIL 60
           MAVLLPSS+   Q KPPQTPKP SS QFSLSS+P  LSL  NKRDFLFQS+SLCIASLIL
Sbjct: 1   MAVLLPSSLLQ-QHKPPQTPKPTSSPQFSLSSDPIILSLNPNKRDFLFQSISLCIASLIL 60

Query: 61  EIPTPISATEAVSSSKSILSAILNTKSWFQFFGAGFSIRIPPEFVDVMEPEDFNAGLSLY 120
           + P  +SATEA SSSKSI S I NTKSW QF+G GFSIR+PP F DV EPED+NAG SLY
Sbjct: 61  KPPISLSATEAPSSSKSIFSGISNTKSWAQFYGDGFSIRVPPLFEDVNEPEDYNAGASLY 120

Query: 121 GDKAKTKTFAARFASPDGYEVVSVIIKPSNSLKITFLEAQDITDLGSLKEAAKIFIPGGS 180
           GDK K KTFAARF+SPDG+EVVSVIIK  N LKITFLEAQDITDLGSLKEAAKIFIPGGS
Sbjct: 121 GDKVKPKTFAARFSSPDGFEVVSVIIKSCNQLKITFLEAQDITDLGSLKEAAKIFIPGGS 180

Query: 181 SLYSARTIKIKEDEGFRTYYFYEFGRDEQRVALVAAVSGGKAFVAGATSPESRWDSDGVK 240
           SLYSARTIKIKEDEGFRTYYFYEF RDEQ VALVAAVSGGKA VAGAT+PES+WD DGVK
Sbjct: 181 SLYSARTIKIKEDEGFRTYYFYEFSRDEQHVALVAAVSGGKAVVAGATAPESKWDDDGVK 240

Query: 241 LRSAALSMTLL 252
           LRSAALS+TLL
Sbjct: 241 LRSAALSLTLL 250
[Close]
BLAST of Spo09536.1 vs. UniProtKB/TrEMBL
Match: A0A067JI42_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23385 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.900e-85
Identity = 167/251 (66.53%), Postives = 202/251 (80.48%), Query Frame = 1 

		  

Query: 1   MAVLLPSSVHHPQPKPPQTPKPISSSQFSLSSNPKTLSLTSNKRDFLFQSLSLCIASLIL 60
           MA+L   S+H   PKP Q P  I    F+   +  T   + +KR+F F++ SL +  L  
Sbjct: 1   MAILFFLSLH--PPKPLQNPNTII---FNARKHTCTFLNSVSKREFFFKTTSLGVIYLTT 60

Query: 61  EIPTPISATEAVSSSKSILSAILNTKSWFQFFGAGFSIRIPPEFVDVMEPEDFNAGLSLY 120
           + P   S  E  S SKS+LS I NTKSWFQF+G GF+IR+PP+F D+MEPED+NAGLSLY
Sbjct: 61  QNPLAQSLAETSSPSKSVLSGIANTKSWFQFYGDGFAIRVPPQFEDIMEPEDYNAGLSLY 120

Query: 121 GDKAKTKTFAARFASPDGYEVVSVIIKPSNSLKITFLEAQDITDLGSLKEAAKIFIPGGS 180
           GDKAK KT+AARFASPDGYEV+SV+I+P+N LKITFLEA+DITDLGSLKEAAKIF+PGGS
Sbjct: 121 GDKAKPKTYAARFASPDGYEVLSVVIRPTNQLKITFLEAKDITDLGSLKEAAKIFVPGGS 180

Query: 181 SLYSARTIKIKEDEGFRTYYFYEFGRDEQRVALVAAVSGGKAFVAGATSPESRWDSDGVK 240
           +L+SARTIKIKEDEGFRTYYFYEFGRDEQ  ALVAAV+ GKA +AGAT+P+S+WDSDGVK
Sbjct: 181 TLFSARTIKIKEDEGFRTYYFYEFGRDEQHAALVAAVNSGKAIIAGATAPQSKWDSDGVK 240

Query: 241 LRSAALSMTLL 252
           LRSAA+S+T+L
Sbjct: 241 LRSAAISLTVL 246
[Close]
BLAST of Spo09536.1 vs. UniProtKB/TrEMBL
Match: A0A0F7GYT8_9ROSI (Photosystem II reaction center PsbP family protein OS=Francoa sonchifolia GN=PPD8 PE=2 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 2.400e-84
Identity = 164/251 (65.34%), Postives = 200/251 (79.68%), Query Frame = 1 

		  

Query: 1   MAVLLPSSVHHPQPKPPQTPKPISSSQFSLSSNPKTLSLTSNKRDFLFQSLSLCIASLIL 60
           MA+LL  S  H  P PP  P P +  + +LSS   T   T +KR FL +S SL    +I 
Sbjct: 1   MAILLSHSPSH-SPHPPHNPNPSTHQRSTLSSVDHTFPKTFSKRHFLLKSTSLSTLLIIP 60

Query: 61  EIPTPISATEAVSSSKSILSAILNTKSWFQFFGAGFSIRIPPEFVDVMEPEDFNAGLSLY 120
             P P S+ E      SILS I NTKSW QF+G GF+IR+PP+F D+MEPED++AGLSLY
Sbjct: 61  NYPVPHSSAEPSPPPNSILSGIANTKSWSQFYGNGFAIRVPPQFEDIMEPEDYSAGLSLY 120

Query: 121 GDKAKTKTFAARFASPDGYEVVSVIIKPSNSLKITFLEAQDITDLGSLKEAAKIFIPGGS 180
           GDKAK KTFAARFASPDG EV+SV+I+PSN LKITFLEA+DITDLGSLKEAAK+F+PGG+
Sbjct: 121 GDKAKPKTFAARFASPDGSEVLSVVIRPSNQLKITFLEAKDITDLGSLKEAAKLFVPGGA 180

Query: 181 SLYSARTIKIKEDEGFRTYYFYEFGRDEQRVALVAAVSGGKAFVAGATSPESRWDSDGVK 240
           +L+SARTIKIKE+EG+RTYYFYEFG+ EQRVALVAAV+ GKAF+AGAT+PES+WD DGV+
Sbjct: 181 TLFSARTIKIKEEEGYRTYYFYEFGKYEQRVALVAAVNSGKAFIAGATAPESKWDDDGVR 240

Query: 241 LRSAALSMTLL 252
           LRSAA+S+++L
Sbjct: 241 LRSAAVSLSVL 250
[Close]
BLAST of Spo09536.1 vs. UniProtKB/TrEMBL
Match: F6HYX5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0128g00030 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 2.400e-84
Identity = 165/241 (68.46%), Postives = 195/241 (80.91%), Query Frame = 1 

		  

Query: 12  PQP-KPPQTPKPISSSQFSLSSNPKTLSLTSNKRDFLFQSLSLCIASLILEIPTPISATE 71
           P+P KPPQ P P +         P+ L   S+KRDF+  + SLC  SL    P  I+  +
Sbjct: 10  PRPLKPPQNPNPTTPK-------PRILC-NSSKRDFILNTASLCAFSLSAHYPVAIAFAD 69

Query: 72  AVSSSKSILSAILNTKSWFQFFGAGFSIRIPPEFVDVMEPEDFNAGLSLYGDKAKTKTFA 131
              SSKSILSAI NTK+WFQFFG GFSIR+PPEF D+MEPEDFNAGLSLYGDKAK +TFA
Sbjct: 70  TSPSSKSILSAIANTKTWFQFFGDGFSIRVPPEFEDIMEPEDFNAGLSLYGDKAKPRTFA 129

Query: 132 ARFASPDGYEVVSVIIKPSNSLKITFLEAQDITDLGSLKEAAKIFIPGGSSLYSARTIKI 191
           ARFAS DG EV+SV+I+P+N LKITFLEA+DITDLGSLKEAAKIF+P  ++LYSARTIKI
Sbjct: 130 ARFASSDGSEVLSVVIRPTNQLKITFLEAKDITDLGSLKEAAKIFVPAAATLYSARTIKI 189

Query: 192 KEDEGFRTYYFYEFGRDEQRVALVAAVSGGKAFVAGATSPESRWDSDGVKLRSAALSMTL 251
           KED+GFRTYYFYEFGRDEQ +A+VAAV+GGKAF+AGA +P+ +WD DGVKLRSAA+S+TL
Sbjct: 190 KEDDGFRTYYFYEFGRDEQHLAVVAAVNGGKAFIAGAAAPQFKWDDDGVKLRSAAISLTL 242
[Close]
BLAST of Spo09536.1 vs. TAIR (Arabidopsis)
Match: AT5G27390.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)

HSP 1 Score: 288.5 bits (737), Expect = 4.000e-78
Identity = 147/254 (57.87%), Postives = 193/254 (75.98%), Query Frame = 1 

		  

Query: 1   MAVLLPS-SVHHPQPKP--PQTPKPISSSQFSLSSNPKTLSLTSNKRDFLFQSLSLCIAS 60
           MA+LL S S+H P PKP  P  PK +SSS              + +RD + ++ SLC  S
Sbjct: 1   MAILLHSLSLHPPNPKPQNPYKPKILSSS-------------ATFRRDVVLRTASLCFVS 60

Query: 61  LILEIPTPISATEAVSSSKSILSAILNTKSWFQFFGAGFSIRIPPEFVDVMEPEDFNAGL 120
            I +   P S  + + S+K +   I NTKSWFQ+FG+GF+IR+PP+F DV EPED++AGL
Sbjct: 61  FIFQNQIPESLADPLKSTKPLRLGIANTKSWFQYFGSGFAIRVPPDFEDVNEPEDYSAGL 120

Query: 121 SLYGDKAKTKTFAARFASPDGYEVVSVIIKPSNSLKITFLEAQDITDLGSLKEAAKIFIP 180
           SLYGDKAK +TFAARF +PDG EV+SV+I+PSN LKITFLEA+DI+DLGSLK AA++F+P
Sbjct: 121 SLYGDKAKPQTFAARFQTPDGSEVLSVVIRPSNQLKITFLEAKDISDLGSLKAAARLFVP 180

Query: 181 GGSSLYSARTIKIKEDEGFRTYYFYEFGRDEQRVALVAAVSGGKAFVAGATSPESRWDSD 240
           G +++YSARTIK+KE+EG R YYFYEFGRDE+R+ALVA+V+ GK ++AGA +PES+W  D
Sbjct: 181 GAATIYSARTIKVKEEEGLRNYYFYEFGRDEERIALVASVNRGKVYIAGAAAPESKWKDD 240

Query: 241 GVKLRSAALSMTLL 252
            +KLRSAA+S T+L
Sbjct: 241 ELKLRSAAISFTIL 241
The following BLAST results are available for this feature:
BLAST of Spo09536.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902234873|gb|KNA23625.1|1.2e-132100.hypothetical protein SOVF_0234... [more]
gi|731328364|ref|XP_010675006.1|6.8e-10482.0PREDICTED: uncharacterized pro... [more]
gi|802757066|ref|XP_012089111.1|4.1e-8566.5PREDICTED: uncharacterized pro... [more]
gi|225451044|ref|XP_002284943.1|3.5e-8468.4PREDICTED: uncharacterized pro... [more]
gi|147834367|emb|CAN69845.1|1.7e-8368.0hypothetical protein VITISV_03... [more]
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BLAST of Spo09536.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RVT4_SPIOL8.2e-133100.Uncharacterized protein OS=Spi... [more]
A0A0J8FCL9_BETVU4.7e-10482.0Uncharacterized protein OS=Bet... [more]
A0A067JI42_JATCU2.9e-8566.5Uncharacterized protein OS=Jat... [more]
A0A0F7GYT8_9ROSI2.4e-8465.3Photosystem II reaction center... [more]
F6HYX5_VITVI2.4e-8468.4Putative uncharacterized prote... [more]
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BLAST of Spo09536.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo09536.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G27390.14.0e-7857.8Mog1/PsbP/DUF1795-like photosy... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3D3.40.1000.10coord: 84..250
score: 1.2
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichunknownSSF55724Mog1p/PsbP-likecoord: 88..250
score: 2.09
NoneNo IPR availablePANTHERPTHR37764FAMILY NOT NAMEDcoord: 39..251
score: 2.5

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
cellular_component GO:0009507 chloroplast
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0009654 photosystem II oxygen evolving complex
molecular_function GO:0005509 calcium ion binding