Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTGGGCCCAGTATATTAGGGCTTTTGATATGAACACATATATAATATATATCTAAAACAAAAAGCCCATTATCCTCACACTACTCTTTCTCATCTTGACCCCCTCCTTTGAAGAGAGAGAAAGAAACATCACTCAGGAAACGCACATTTTGAGAGGTAGTCACCATTTCCAATTTTCAACCCTGCGAAAACAAAAATGTACCGTCAAGCCACCACCCGGCTCCTCCGATCCGTCAAATCTCAGGCGTTTTCAACGTCGGCTGAAGTTCCGGCCACCGCACAAGGTGTCACAGATTTTCTGGAAAAATGGAAGAAAAATGTACCAAACACGGATCCTCCCGCAACCCCATCTTCTTACATGAAAACTCGTCCTTCTACACCTTCAACTATCCCTTCTAAGCTCACTATTAATCTCGCTCTTCCTTACTCCACTGCTCTTTCAACTAAAGAGGTTCGCTTTTGATTTTTTGATTTTTTTTAATTGTTATTGATTTTGATGCGTGTTTGGATGATTGTGTGATTAATGCGATCTGGGGTTGTTGGATTCAATGCTAATTTCTTGTGGGGTGGTTCTTTTTTTGGTGGATTTGAGATTTTCTTATGATCTTTTTTCATTAGGGTTTGTGTTGTTTTTTTGCTTGCAATTATTTATGAAATATTGGGAGATGTGATTTTCCACATTTTTTTGGTTGATGAATTATGAAAAGCGGACTGTGAGCTGCCCCGAATTGGTTTGTTTTATTTTGATTTGTTTGGGTTCTATCAGAAGTTATGTTTTTATGTGCGAAAGGAAAAGGATGGCTGACATTCAATTTGATTGAAGGAGAATTTTTCTTTTATTTAGGAAATGTGTAAGTGGCCTGATTCTAAAGCTAAATTGCATTTATTTTGACTAAATTGAGATTTGAGAACTTAAGTTGATTTTTTCCTTAGTTTAGTTCACTTGATTGGTGCAAGAAATTGTTCCCTGTGCCCAAAAGTTACTAGCAGAAGATCATGTCCCAAATCCGCATCGAGGTTTTTGTGCTAATGATTTTATTTATATGACGTTCTTGCTTGTTTGGAGAGAATAGCTTATTTATCTGTGAGGGTGATAGTGGAGGGTCGGTGTGGTGATATTTTAGCAGGATTTTTTCCGGTGGAGAAGATACTGTTGAAGAGTGTCACTAATGAGATGGTGTCCTATGTTGGGAAAATAACTAGAACAACTTTCTTCACTGGGGTGATTTAGTTTTCCGATTAGGTTCCGTTTGGTAGGGTGTAAAACGTTTTCATGGAAAACAATTTTGACATTTTCAATCATTTTACGCGGTTTGGTTTGACAAGGGATGGAAAATAATTTTCCATAACTCCCTCGAAGGTGGGAAAACCTTTTCCATTTGAAAGGGAGGAAACCCACTTTTCCACCTTTCCTCCTTGCCTCTCTCTCCCTTCTTCCCCTCAACCTTCACCATCTTCTTCCATTTTCTTTTAAGGAACCAAACAAAGAAAAACTAGTTTGGATTTTTTTTTATCCTTGGAAAATGTTTTCCATGGAAAATAATTTTACACCGAAAAACGTTTTACACCAAACCAAACGGAGCCTTAATATGCACTTCAGATGGAGTATGGAGTGATGATATTAGATCACACACAAACCTGAATGTTAATGTTAGCGTGAAGTATGTTGTAAGTAATGATGGGAGAAATGAAGGCGGCTGTTGTTCTGTTACTTAGGTACTTATTTTACAGTGGGTTCTTGGTCAAATCATGTGTCAATTTTAGCTTGTAAAATCTTATATATCATGCCTTCAAATCTTAGTTAGCCAAAATGTTGCGAAGCATGAAACTAGGAAACCGTTGTTGGTTAAGATCCCTTGTTCTATAGACTTTGGGCTCTATTTTGGATTTGTGTCACATGGCCTTTTCTGCAGCATTGTCTGCCGCGAAAGGGGTATGTTTTATCATTGACGATCATAGGCCGCATATGCTTGTTCTGTCATTACTTTGCCACTTGTTATATCTTCTTTATACTCCCTCCGTCCCAATTTAATCTCGCAATAGGATTTTCAAGAAGTTTTATGCGACAAGTTGTTGTTTGCTTATATTTTATTAGAATAGTAGATGTGATGAGAAATACTCTGGAATTGTAGCATTGAGTCTGTGAATTAGGGTAGTACACTTTGCATTATGCCCATTTAGTGATTCAAGATCTATAGTAAGAGGACCCCTAAAACAAATCCATACAAATAATTATCTAATTGTTGATTACTTTTTACATGGATGACGGATTCACGAATTAGAGTTTGCACATTGGTTAATACCGTCATGACACATTTTCATAAATAAAAAGTCACCTTTTAGGCTATTATTGAAGTGGAATCAAAGATTCACTGTCCTTTGACTGTTGAATTGTGAATTTGTGATGATGGATTTTAGTTAATTAAAAGTCCCTGCACTTCTTGGTGATTATAAATAAGTGATTGATGGTTATTACGTACTGAATGATGGCTCGATTGGAAATAGCCTCAGAGAGTCAGAGTTATTACATGGCTGTTAACAGTGAATGCCTTAACCCCCTACCCAGTGCAAGAGCTTTCCTTAAGGCATTGGGACTTGTGAGTAACGTTGATATTGGAGATTTTTTTTTCTTTTGAATGGACTTAATATTTCTCATAGATGATACTGATCACTTACTGAGTTACGGATGATGTGTATCATGTTATCCTCTATAATTCCAACAGATTTCAACAGTGGCAATGTCAGATTTATATTTAAAACAAGTTTCCCTCATGTCATAATTTATCAAAAATTTGCACTGGATTGTGTTGGTTTAATTATATTTTTACAGGAGCAACTTCTATATCTGAAATCACTTCATTGGCATGAACATTTTCCATTTTCCGTCTTTATTAGTTTACAGAATCTATAACAAGGCTCAATTCCAGTGTGACTTCTGTTGAGCATGTTTTTGCATTTTTGACATTTGTTTACCAACTTTGGGGTTGGGAAGGGGGATTTATTCTGTTGTACCTGAGAAGTGCTTCATGGAAATTGAGGGAGTAGCACTTGCAACCATGTATCATGCTTGCCAAATGCCTCTCATTATTATCCCTCTATTAGCTCTGTTATGTTCACCTTATTTCCACTTATTTCAGGAAAAATAAGTTCAGATAAGATAAGTTCAGGAAAAATAAGTTAAAATCAAGTGAATAGAACACATCCTTACTCTATCTGAAGATGTTTTTTGCATTTTATATCATTCTGCTGTATTTGGTCTGTTTTCAGGTTGACATGATCATAGTACCTGCAACTACTGGTCAAATGGGTGTGCTTCCTGGTCACGTTGCCACAATCGCAGAATTGAAGCCCGGGATCATGTCAGTACATGAAGGCAATGATGTGACTAAATACTTCATCAGCAGTGGGTTTGCATTCATCCATGGAAATTCATATACCGATATAGTCGCTGTTGAGGCTGTACCTATTGACCAAATTGACCCTGCTGCTGTTCAGAAGGGACTTGCAGAATTCAATCAAAAGCTGAGTTCTGCATCCACTGATTTGGAGAAAGCTGAAGCCCAAATCGGAGTCGATGTTCACAGTGCTCTTAATGGTGCCCTTACTGGTTGATAATATTTTGAGCTGAAAATGATTTTTTTTTCTTCTCCATTTTGATTTTGCTCTTTCAAAGGCATGTTGAAGAATGTTTAGGATCCTTTTTTTACTGTGAAGCCCTATATGGATGTTGCTTCGTTGTCCTGGAAAGGTTATAATAAATTTATGTGAAACAAGAGCCCTGCGTGCCTTTCTTGTTGCAAACTCACAGAAATGTTGTTTTTGATGCTCGGTACTATTTTTTGTTTGTGTGACCATCTTTTGGTCTATAGAAAAGTTGTGTATTATTTGACATGTATCCTAAATCGCCGAGTTATAAGCTTTGGATGTTGAAAGTATCATTCAATTGCAGCAGTATTATCAAATTAGCTTTGGATGTTGAAAGTATCATTTAAT ATTGGGCCCAGTATATTAGGGCTTTTGATATGAACACATATATAATATATATCTAAAACAAAAAGCCCATTATCCTCACACTACTCTTTCTCATCTTGACCCCCTCCTTTGAAGAGAGAGAAAGAAACATCACTCAGGAAACGCACATTTTGAGAGGTAGTCACCATTTCCAATTTTCAACCCTGCGAAAACAAAAATGTACCGTCAAGCCACCACCCGGCTCCTCCGATCCGTCAAATCTCAGGCGTTTTCAACGTCGGCTGAAGTTCCGGCCACCGCACAAGGTGTCACAGATTTTCTGGAAAAATGGAAGAAAAATGTACCAAACACGGATCCTCCCGCAACCCCATCTTCTTACATGAAAACTCGTCCTTCTACACCTTCAACTATCCCTTCTAAGCTCACTATTAATCTCGCTCTTCCTTACTCCACTGCTCTTTCAACTAAAGAGGTTGACATGATCATAGTACCTGCAACTACTGGTCAAATGGGTGTGCTTCCTGGTCACGTTGCCACAATCGCAGAATTGAAGCCCGGGATCATGTCAGTACATGAAGGCAATGATGTGACTAAATACTTCATCAGCAGTGGGTTTGCATTCATCCATGGAAATTCATATACCGATATAGTCGCTGTTGAGGCTGTACCTATTGACCAAATTGACCCTGCTGCTGTTCAGAAGGGACTTGCAGAATTCAATCAAAAGCTGAGTTCTGCATCCACTGATTTGGAGAAAGCTGAAGCCCAAATCGGAGTCGATGTTCACAGTGCTCTTAATGGTGCCCTTACTGGTTGATAATATTTTGAGCTGAAAATGATTTTTTTTTCTTCTCCATTTTGATTTTGCTCTTTCAAAGGCATGTTGAAGAATGTTTAGGATCCTTTTTTTACTGTGAAGCCCTATATGGATGTTGCTTCGTTGTCCTGGAAAGGTTATAATAAATTTATGTGAAACAAGAGCCCTGCGTGCCTTTCTTGTTGCAAACTCACAGAAATGTTGTTTTTGATGCTCGGTACTATTTTTTGTTTGTGTGACCATCTTTTGGTCTATAGAAAAGTTGTGTATTATTTGACATGTATCCTAAATCGCCGAGTTATAAGCTTTGGATGTTGAAAGTATCATTCAATTGCAGCAGTATTATCAAATTAGCTTTGGATGTTGAAAGTATCATTTAAT ATGTACCGTCAAGCCACCACCCGGCTCCTCCGATCCGTCAAATCTCAGGCGTTTTCAACGTCGGCTGAAGTTCCGGCCACCGCACAAGGTGTCACAGATTTTCTGGAAAAATGGAAGAAAAATGTACCAAACACGGATCCTCCCGCAACCCCATCTTCTTACATGAAAACTCGTCCTTCTACACCTTCAACTATCCCTTCTAAGCTCACTATTAATCTCGCTCTTCCTTACTCCACTGCTCTTTCAACTAAAGAGGTTGACATGATCATAGTACCTGCAACTACTGGTCAAATGGGTGTGCTTCCTGGTCACGTTGCCACAATCGCAGAATTGAAGCCCGGGATCATGTCAGTACATGAAGGCAATGATGTGACTAAATACTTCATCAGCAGTGGGTTTGCATTCATCCATGGAAATTCATATACCGATATAGTCGCTGTTGAGGCTGTACCTATTGACCAAATTGACCCTGCTGCTGTTCAGAAGGGACTTGCAGAATTCAATCAAAAGCTGAGTTCTGCATCCACTGATTTGGAGAAAGCTGAAGCCCAAATCGGAGTCGATGTTCACAGTGCTCTTAATGGTGCCCTTACTGGTTGA MYRQATTRLLRSVKSQAFSTSAEVPATAQGVTDFLEKWKKNVPNTDPPATPSSYMKTRPSTPSTIPSKLTINLALPYSTALSTKEVDMIIVPATTGQMGVLPGHVATIAELKPGIMSVHEGNDVTKYFISSGFAFIHGNSYTDIVAVEAVPIDQIDPAAVQKGLAEFNQKLSSASTDLEKAEAQIGVDVHSALNGALTG Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo09713.1 vs. NCBI nr
Match: gi|902230320|gb|KNA21808.1| (hypothetical protein SOVF_039810 [Spinacia oleracea]) HSP 1 Score: 379.8 bits (974), Expect = 2.900e-102 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1
BLAST of Spo09713.1 vs. NCBI nr
Match: gi|731332445|ref|XP_010677211.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 315.8 bits (808), Expect = 5.200e-83 Identity = 168/200 (84.00%), Postives = 180/200 (90.00%), Query Frame = 1
BLAST of Spo09713.1 vs. NCBI nr
Match: gi|255575798|ref|XP_002528798.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Ricinus communis]) HSP 1 Score: 281.6 bits (719), Expect = 1.100e-72 Identity = 144/199 (72.36%), Postives = 170/199 (85.43%), Query Frame = 1
BLAST of Spo09713.1 vs. NCBI nr
Match: gi|720044404|ref|XP_010269876.1| (PREDICTED: ATP synthase subunit delta', mitochondrial-like [Nelumbo nucifera]) HSP 1 Score: 279.6 bits (714), Expect = 4.100e-72 Identity = 146/202 (72.28%), Postives = 169/202 (83.66%), Query Frame = 1
BLAST of Spo09713.1 vs. NCBI nr
Match: gi|1009159533|ref|XP_015897863.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Ziziphus jujuba]) HSP 1 Score: 278.5 bits (711), Expect = 9.200e-72 Identity = 144/201 (71.64%), Postives = 167/201 (83.08%), Query Frame = 1
BLAST of Spo09713.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQQ0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_039810 PE=3 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 2.000e-102 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1
BLAST of Spo09713.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F6Z5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g105670 PE=3 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 3.600e-83 Identity = 168/200 (84.00%), Postives = 180/200 (90.00%), Query Frame = 1
BLAST of Spo09713.1 vs. UniProtKB/TrEMBL
Match: B9SS29_RICCO (ATP synthase delta chain, mitochondrial, putative OS=Ricinus communis GN=RCOM_0520230 PE=3 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 7.600e-73 Identity = 144/199 (72.36%), Postives = 170/199 (85.43%), Query Frame = 1
BLAST of Spo09713.1 vs. UniProtKB/TrEMBL
Match: D7SM33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00920 PE=3 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 2.400e-71 Identity = 144/206 (69.90%), Postives = 167/206 (81.07%), Query Frame = 1
BLAST of Spo09713.1 vs. UniProtKB/TrEMBL
Match: A5C7J7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044183 PE=3 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 3.200e-71 Identity = 144/206 (69.90%), Postives = 167/206 (81.07%), Query Frame = 1
BLAST of Spo09713.1 vs. ExPASy Swiss-Prot
Match: ATP4_IPOBA (ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas PE=1 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 2.300e-70 Identity = 137/202 (67.82%), Postives = 165/202 (81.68%), Query Frame = 1
BLAST of Spo09713.1 vs. ExPASy Swiss-Prot
Match: ATP4_ARATH (ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana GN=At5g47030 PE=1 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 5.600e-69 Identity = 138/207 (66.67%), Postives = 167/207 (80.68%), Query Frame = 1
BLAST of Spo09713.1 vs. ExPASy Swiss-Prot
Match: ATP4_PEA (ATP synthase subunit delta', mitochondrial OS=Pisum sativum PE=3 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 2.400e-64 Identity = 127/200 (63.50%), Postives = 156/200 (78.00%), Query Frame = 1
BLAST of Spo09713.1 vs. ExPASy Swiss-Prot
Match: ATPD_AGABI (ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus GN=atpD PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.400e-19 Identity = 50/133 (37.59%), Postives = 81/133 (60.90%), Query Frame = 1
BLAST of Spo09713.1 vs. ExPASy Swiss-Prot
Match: ATPD_DICDI (ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum GN=atp5D PE=3 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 5.300e-19 Identity = 50/126 (39.68%), Postives = 75/126 (59.52%), Query Frame = 1
BLAST of Spo09713.1 vs. TAIR (Arabidopsis)
Match: AT5G47030.1 (ATPase, F1 complex, delta/epsilon subunit) HSP 1 Score: 261.9 bits (668), Expect = 3.100e-70 Identity = 138/207 (66.67%), Postives = 167/207 (80.68%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo09713.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo09713.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo09713.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo09713.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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