Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTATTTTTGGGTTTAGTAAACCCTTTTTCCAGTGGGCTAGCCAAAAGCCCACCTGTTTTCCTTTTTATTTTTTTATTTTTTTTTAAGTAAATAAGTGTCGACGATTAAGTAAAGCAGCATCTCCTCCATTTTCATCGTCTTAAAACCTAACTACTCTCCCCCCGACAACCAAACCAGCATCAGCGCCTCCTTCTCTGCTGCTGCTATTCTCGGTAATTATCTACGAGTATTTGTGTCGATTTTTCTGTTGATTTTATTTGTATTGTTATTGATTCAAAATGTAATTTTCTAATATGTTAAGACTGTGTTCTGTTAATTTAGGGGGTTTTGTTGGTTAGGGTTTTTCATTTTAATTGATAATTTAAGCATGATTTGAACTTTTTAACAAGTGCAATTGCTTAGATTTAAGAGTGTTGAATTGATTGGCGTGTTTTCAGACAATAGATTTGATTGAGTAATTTAACTGTATGTTCTAATTTGATTGAATTGTTTATTGTGTTTTGCAACATAAATTTGATTTAGAGATCCGAACTTGCAGCTTCTGCATCAATGGCTGTCACATTTTACGATCTGAGCACTGATGCTGGTTTGAAAAAGCTCGATGAGTACCTCCTTAGCAGGAGTTACATCACTGGGTGAGCCTGAATTTTGATTTAATTGCGTATTTTTTAAAAATTGTAATTACATATTTTTCTGTAGTGTGATTGTGGTATTTTTCTGTATAATGTGATATGCTAGTTACCAAGCCTCCAAGGATGATCTCGCCGTGTATTCTTCCGTCTCAAAGAAATCTTTGGATGCATATGTGAATGTATCCAGGTGGTACAAACACATCGATGCGCTGTTGAGGATCTCGTAAGATTACAATTTCTAGCTTTGAGCTTAAGTTTCATGTGATTGAGCTATTGTTTTTGAATTCTACGGATTTCTTTTGTTTAAGTTGGTTGAATATTGTCTTGTTGTTTTTCGATTAGTGGCGTGTCCGCTGAGGGATCAGGTGTTACAGTTGAGGGTTATGCTCCCGCTTCTGAAGTCGCTACTCCCCCTGCTGCTGACTCTAAGGTAATAATCTCAAGTTGTGTTATCGGGTTCTTCTAAGTGCATGCTTGGTATGAATCTAGAAAAGGAAACAGATTGGAAACATTTAAGAAGAGAAATGGTAATGTTAAGTGTTATCATTATTTGTCCTTTGGTATACCTAAGGAAAGCAATCCCTTGCATCAAATTAGGGATTAAGGAGGGTGACATTTTGTTACCACAAGGTTAGGAGAGGTAATGAATTGGTGGTAAAGGTTAACCTTTGGAAATAGAGTGTGTTACCCATTTCTATACCAAACAATAGGTAATGAAATTAGTTAATTGATTCCATTTCTAACACTTAGAAAAGTGTTATACCAAACATGCTCTAATTGGTTATTCTGAGAACTTTCTGCATTGTGCTTTTCTGCTATCTGATTTGAGTGATTGAAATATTTTCAGGCTTCAGCTGCCGATGATGAAGATGAAGATGACGACGATGTTGATCTCTTTGGTGAAGAAACTGAAGAGGAGAAGAAGGCTGCTGAAGAACGTTCTGCAGCTACCAAGGCATCCATTAAAAAGAAAGAGTGTGAGTATAAAATTCTGTCTTAGAATCTTACTTAAATGCTAAGGCTCCGTTTTATTCGACTTATTTTGTCTGAACTTTTATTATCTGAACTTAATTGAACTGATTTTATCCGAGAAAAACTTAAGTTTTCTAAAATAAATTTATTTGTGAGTAAAAATGTCTAAAAAGAACTTATTCATTTTTGAACTTATATTATTTGAACTTGTATTATTTGAACTTAACTGAACTTAAACTTATTTTGTCAGAAATAAGTTAACAAAACCGAGCCTAAGTTTATACTTCTTTCTTTTGAATGGATGTATTTGGTTTGAGTTTGGAGAAATTGTACCCGAAACTTGAAAATTACTCACACATGAGTACATGACATGACACACAATCCTATATAACTGATTGGCATATGAGCTCTCATACTTTCATGTTGAAAACAAACATATTTGCTTTGTGGCATTGTTCTAATATGTTTGTTTTCTCTTTTGTTTGATTTCATTTTGAAACAGCCGGCAAGTCATCAATCTTGTTGGATGTGAAGCCATGGGATGATGAAACTGACATGAAGAAGCTTGAGGAAGCCGTCAGGAGTGTCCAGAAGGAGGGATTGCTATGGGGATCATGTATGTTTACCTTGTGTTTACAACTAACTATGTTCATTAGATTTTGTTTCGATTTCCTTTTTAATTTATTGAATTTGGTTTTTTGTTTGTCAGCCAAACTCGTGCCAGTCGGGTTTGGTATCAAGAAATTGACAATCATGATGACAATCGTGGATGACTTAGTCTCCGTTGATGATTTGATCGAGGATCATTTGACAGCTGAGCCGATCAACGAGCATGTGCAGAGTTGTGATATTGTTGCCTTCAACAAGATTTGAGAGGGATGGGTGTGCTTGCTGCATCTCCAATCTGAATTTTATCATGTTACTAATATGATTTTGTTTGAGGTCTAATTTGTTAGAAAAACTGGCTTTGTGCCCATGTTGAGTTGCTTGTTTCAAGGCACTTGAGAAGTAGCATGATCAATGTTTTTTTATTGATTTGTCTTTTTGTTTTTGAAATTTGTTTAGGCTGCCCATTGTGGGTAGGTTGCATTGTTTTGGAGTTAAGTTGGCAAAAGCTTGCCCAACTCGAACCTAATCCAATAATAAAAGGCATGGGTCGACCCAACCCAACCCAACCCATCCCA TTATTTTTGGGTTTAGTAAACCCTTTTTCCAGTGGGCTAGCCAAAAGCCCACCTGTTTTCCTTTTTATTTTTTTATTTTTTTTTAAGTAAATAAGTGTCGACGATTAAGTAAAGCAGCATCTCCTCCATTTTCATCGTCTTAAAACCTAACTACTCTCCCCCCGACAACCAAACCAGCATCAGCGCCTCCTTCTCTGCTGCTGCTATTCTCGCTTCTGCATCAATGGCTGTCACATTTTACGATCTGAGCACTGATGCTGGTTTGAAAAAGCTCGATGAGTACCTCCTTAGCAGGAGTTACATCACTGGTTACCAAGCCTCCAAGGATGATCTCGCCGTGTATTCTTCCGTCTCAAAGAAATCTTTGGATGCATATGTGAATGTATCCAGGTGGTACAAACACATCGATGCGCTGTTGAGGATCTCTGGCGTGTCCGCTGAGGGATCAGGTGTTACAGTTGAGGGTTATGCTCCCGCTTCTGAAGTCGCTACTCCCCCTGCTGCTGACTCTAAGGCTTCAGCTGCCGATGATGAAGATGAAGATGACGACGATGTTGATCTCTTTGGTGAAGAAACTGAAGAGGAGAAGAAGGCTGCTGAAGAACGTTCTGCAGCTACCAAGGCATCCATTAAAAAGAAAGAGTCCGGCAAGTCATCAATCTTGTTGGATGTGAAGCCATGGGATGATGAAACTGACATGAAGAAGCTTGAGGAAGCCGTCAGGAGTGTCCAGAAGGAGGGATTGCTATGGGGATCATCCAAACTCGTGCCAGTCGGGTTTGGTATCAAGAAATTGACAATCATGATGACAATCGTGGATGACTTAGTCTCCGTTGATGATTTGATCGAGGATCATTTGACAGCTGAGCCGATCAACGAGCATGTGCAGAGTTGTGATATTGTTGCCTTCAACAAGATTTGAGAGGGATGGGTGTGCTTGCTGCATCTCCAATCTGAATTTTATCATGTTACTAATATGATTTTGTTTGAGGTCTAATTTGTTAGAAAAACTGGCTTTGTGCCCATGTTGAGTTGCTTGTTTCAAGGCACTTGAGAAGTAGCATGATCAATGTTTTTTTATTGATTTGTCTTTTTGTTTTTGAAATTTGTTTAGGCTGCCCATTGTGGGTAGGTTGCATTGTTTTGGAGTTAAGTTGGCAAAAGCTTGCCCAACTCGAACCTAATCCAATAATAAAAGGCATGGGTCGACCCAACCCAACCCAACCCATCCCA ATGGCTGTCACATTTTACGATCTGAGCACTGATGCTGGTTTGAAAAAGCTCGATGAGTACCTCCTTAGCAGGAGTTACATCACTGGTTACCAAGCCTCCAAGGATGATCTCGCCGTGTATTCTTCCGTCTCAAAGAAATCTTTGGATGCATATGTGAATGTATCCAGGTGGTACAAACACATCGATGCGCTGTTGAGGATCTCTGGCGTGTCCGCTGAGGGATCAGGTGTTACAGTTGAGGGTTATGCTCCCGCTTCTGAAGTCGCTACTCCCCCTGCTGCTGACTCTAAGGCTTCAGCTGCCGATGATGAAGATGAAGATGACGACGATGTTGATCTCTTTGGTGAAGAAACTGAAGAGGAGAAGAAGGCTGCTGAAGAACGTTCTGCAGCTACCAAGGCATCCATTAAAAAGAAAGAGTCCGGCAAGTCATCAATCTTGTTGGATGTGAAGCCATGGGATGATGAAACTGACATGAAGAAGCTTGAGGAAGCCGTCAGGAGTGTCCAGAAGGAGGGATTGCTATGGGGATCATCCAAACTCGTGCCAGTCGGGTTTGGTATCAAGAAATTGACAATCATGATGACAATCGTGGATGACTTAGTCTCCGTTGATGATTTGATCGAGGATCATTTGACAGCTGAGCCGATCAACGAGCATGTGCAGAGTTGTGATATTGTTGCCTTCAACAAGATTTGA MAVTFYDLSTDAGLKKLDEYLLSRSYITGYQASKDDLAVYSSVSKKSLDAYVNVSRWYKHIDALLRISGVSAEGSGVTVEGYAPASEVATPPAADSKASAADDEDEDDDDVDLFGEETEEEKKAAEERSAATKASIKKKESGKSSILLDVKPWDDETDMKKLEEAVRSVQKEGLLWGSSKLVPVGFGIKKLTIMMTIVDDLVSVDDLIEDHLTAEPINEHVQSCDIVAFNKI Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo09714.1 vs. NCBI nr
Match: gi|902230318|gb|KNA21806.1| (hypothetical protein SOVF_039790 [Spinacia oleracea]) HSP 1 Score: 432.6 bits (1111), Expect = 4.500e-118 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1
BLAST of Spo09714.1 vs. NCBI nr
Match: gi|902206403|gb|KNA15452.1| (hypothetical protein SOVF_097960 [Spinacia oleracea]) HSP 1 Score: 401.7 bits (1031), Expect = 8.400e-109 Identity = 215/232 (92.67%), Postives = 225/232 (96.98%), Query Frame = 1
BLAST of Spo09714.1 vs. NCBI nr
Match: gi|870859820|gb|KMT11208.1| (hypothetical protein BVRB_5g110420 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 364.4 bits (934), Expect = 1.500e-97 Identity = 200/233 (85.84%), Postives = 214/233 (91.85%), Query Frame = 1
BLAST of Spo09714.1 vs. NCBI nr
Match: gi|747043427|ref|XP_011083724.1| (PREDICTED: elongation factor 1-delta [Sesamum indicum]) HSP 1 Score: 360.5 bits (924), Expect = 2.200e-96 Identity = 195/233 (83.69%), Postives = 214/233 (91.85%), Query Frame = 1
BLAST of Spo09714.1 vs. NCBI nr
Match: gi|747043423|ref|XP_011083703.1| (PREDICTED: elongation factor 1-delta-like [Sesamum indicum]) HSP 1 Score: 358.6 bits (919), Expect = 8.200e-96 Identity = 196/233 (84.12%), Postives = 214/233 (91.85%), Query Frame = 1
BLAST of Spo09714.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQJ0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_039790 PE=3 SV=1) HSP 1 Score: 432.6 bits (1111), Expect = 3.100e-118 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1
BLAST of Spo09714.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9I2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_097960 PE=3 SV=1) HSP 1 Score: 401.7 bits (1031), Expect = 5.900e-109 Identity = 215/232 (92.67%), Postives = 225/232 (96.98%), Query Frame = 1
BLAST of Spo09714.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CGQ0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g110420 PE=3 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 1.000e-97 Identity = 200/233 (85.84%), Postives = 214/233 (91.85%), Query Frame = 1
BLAST of Spo09714.1 vs. UniProtKB/TrEMBL
Match: A0A0D2RIZ3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G205500 PE=3 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 7.400e-96 Identity = 192/232 (82.76%), Postives = 210/232 (90.52%), Query Frame = 1
BLAST of Spo09714.1 vs. UniProtKB/TrEMBL
Match: A0A0D2PYK4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G205500 PE=3 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 7.400e-96 Identity = 192/232 (82.76%), Postives = 210/232 (90.52%), Query Frame = 1
BLAST of Spo09714.1 vs. ExPASy Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3) HSP 1 Score: 357.5 bits (916), Expect = 1.100e-97 Identity = 198/233 (84.98%), Postives = 212/233 (90.99%), Query Frame = 1
BLAST of Spo09714.1 vs. ExPASy Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3) HSP 1 Score: 344.0 bits (881), Expect = 1.300e-93 Identity = 184/232 (79.31%), Postives = 210/232 (90.52%), Query Frame = 1
BLAST of Spo09714.1 vs. ExPASy Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=1 SV=2) HSP 1 Score: 330.9 bits (847), Expect = 1.100e-89 Identity = 176/230 (76.52%), Postives = 204/230 (88.70%), Query Frame = 1
BLAST of Spo09714.1 vs. ExPASy Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=1 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 1.300e-88 Identity = 175/230 (76.09%), Postives = 204/230 (88.70%), Query Frame = 1
BLAST of Spo09714.1 vs. ExPASy Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3) HSP 1 Score: 317.0 bits (811), Expect = 1.700e-85 Identity = 173/232 (74.57%), Postives = 199/232 (85.78%), Query Frame = 1
BLAST of Spo09714.1 vs. TAIR (Arabidopsis)
Match: AT1G30230.2 (Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6) HSP 1 Score: 330.9 bits (847), Expect = 6.400e-91 Identity = 176/230 (76.52%), Postives = 204/230 (88.70%), Query Frame = 1
BLAST of Spo09714.1 vs. TAIR (Arabidopsis)
Match: AT2G18110.1 (Translation elongation factor EF1B/ribosomal protein S6 family protein) HSP 1 Score: 327.4 bits (838), Expect = 7.100e-90 Identity = 175/230 (76.09%), Postives = 204/230 (88.70%), Query Frame = 1
BLAST of Spo09714.1 vs. TAIR (Arabidopsis)
Match: AT5G12110.1 (Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6) HSP 1 Score: 250.4 bits (638), Expect = 1.100e-66 Identity = 147/233 (63.09%), Postives = 178/233 (76.39%), Query Frame = 1
BLAST of Spo09714.1 vs. TAIR (Arabidopsis)
Match: AT5G19510.1 (Translation elongation factor EF1B/ribosomal protein S6 family protein) HSP 1 Score: 248.4 bits (633), Expect = 4.200e-66 Identity = 142/232 (61.21%), Postives = 176/232 (75.86%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo09714.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo09714.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo09714.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo09714.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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