Spo09882.1 (mRNA) | SpinachBase

Overview


Name	Spo09882.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	SRP40, carboxy-terminal domain protein
Location	SpoScf_02963 : 15929 .. 23997 (+)
Sequence length	1705

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAAAAAAAAGAAGAAAAAAAAGAAGAAAACTCCCTCCCTAAAACCCTAACTACTAGAACCTTCGAAACCCGTTTCTCTCTCCTCGAGCAGAGCCTACATGCAAAATTGCGAGCAAAGGAGCACAGGAGAAGCCGCAACCGCCATTTCTACTCTCTTCACTTTCTTCAAACCTCGTCAAGTTATACTCAATTCATTGTCAAGTATGAAGCTCGACAACAAAAATGGCGACAAAACCCTAATTTCTCTCACTGGTCAGCAAAGGAAACTGCTTCTCCAATCAATTTGTCAATTCCTTGAACAAAGTGGCTTCTCCAAATCTCTTAAGAATTTTTACAAAGAGGCAGAAATCGAGGTTCGCTCATTTATATTTGTTTTTTGGTTTAATTTGTTTAATTTGTTCCCCTAATTTACGAATTTATTGACTGGAAGTTGCAGAAAGAGAGTTGGAAGGATTGTTTATTGAATTTGGAAGAGATGTGTTACCAATTTTTGAAGTTGAGGTAGGTCGAACCGTCGAAAGTTAATACTAATCAATGTCAATTACTTCAATTTTTTCTTAAGAGTTGCTGCTCATTTCATGTACTGTATTAAGGTTTATGATTGTTTAATGTGATCCTAATTGCTAATGCTGGAATGGACTCAATGTGCCAAAGATTGCTCATTTTCATGATTGTTAAATGCTTATGTTATTGTAGGTTTGCTTGTGAGTTTCATTCAATTTCACAATGTAATAATTTGAAGAGAATGCTTGCTTTTTTTTATATTTCAAGTCATGGGACATGGTTTTTGCTGCTAAATTTATGTGCCAATTGGTGCGGCTTTGTGTAAAGGTGTCAAGATTAATCATTGTTCATCTTTGGGTATTGATAGCTATTGGAGTTGGGATATTATATTATTGTTGGCGAATGGCGATGTTTGATGTTTATTTATGTTAAGTGGTTGGATTGATCATGCTTGGGTAACTGTTAGGGTCTGTGGCGCCTTGTCTTGTTTATGCATCGTTTAATTAGTTTACTTAGGTCAAGAATCTCTGTTCTAATGCTACTTGTGTCTCTGTCGCGGGTAGGGATGACGCTAAAATTAGTGATTCTGCGGCTTGTGCTGCCAAAGAAATAGCTACTGCCCAGAAGGATGGAAGTATAAATGGTGTTGCATCTGAGGAGCAGGAAAATAACCCTGTTGATGATGTTAATATAAAACATAAGAAAAAAAAGAAAAGCAAAAGTGCTAGTGATTCATCTGCTCAAATTGCTGAGGAAATTGACCCAAAACCCTCAAAAGTCCCTGAAGACGTTTCTTTGATTGTGCCAAGTGAACCTGAAAAGAAATCCAAGAAGAAGAAGCGCAAGGGTGAATCTCAGGAAGAAAACAAAGAGGAACTGCCAGCAGAAGAAACATCAGAAAAACCCGATGTTTCAAAGGAAGAGAAGAAAGAGAAGTCCAAAAGTAAGAAAAAGAAAGAAGATACTTTGAAACCCAATGATTCACCTGTAGAAATTACGGAGGTTGTTAGTGAGAAAAAAATTTCGAAGAAAAGAAAGAAGTCCTCATCTGATGAAAATGAGACCGAATGTGTTGAAAAGGCAGCACTTGATGACTTCAAGCGTAGGAAGACAGAAAATTTAGATGAATCAAATGGAACCATTCTCCCTAAAACACCTAATGGATCTGCCAATGGAGTCTTGGAAAATGGTGATAGCAAGGAGTCGCAGAAGAAGGATAAAACAAAGCAGCTCAATGGTTCTGAGGTATGTATGCGGCAACATAGTGCTTGCTTTGGTATTGATTAATTGGTCTTAAGTCTTATGTGATACAAGTGTCCGATATACAAGAGGTTGACTGCTTGAGCTGTGGAGACTTGCCAACTTGATGTATACTCTGATGTATACTCAGAGAAGCAAGCTAGCATATTCCCAGAAATCCTAATGTTTACAGAGTTTGATGAGTTAAAAGTACAATATGATCTGTATGCTATGTGGAAAAGCATATGGATTACAATGCATCCATGTCTTTATAACATTTCTCAAATTCCAAACACCAGTTAGAACGATGTTTATGGGAATTATATGGTAAACTACCACTCCACAAAATAACCAAATTCACCTTGACATGAGACTTAAAACTCTCGGTATAGCCTGCTTCCTCACTCTTTTTTCCTATCAGAGAAAATACTTTCAAAGAAATCTTTGCCTAGAATAAGTACTGCACGTATAAACTACAATGAGGGAAAGGCTAGTATGAGGGACGGTCTTAATGTTGTCAGGCTTTGAGTTGAGTAGTGTGGGGGGAAACTTGCTTTTGTGATTTGGTGGAGGATTCCGATGCACTTGGCTATGAGCAGAGAGCACAGTGTGGCCTCAATTTAGGTTATTTTTGTCTATTCATGGTTGGTTGGCTGGCATAATTTTCAAATTTGATTCAAACAATAGCATAAGTCTGGTGTCAGATTGCTTCCAATTGGTGTGCAGTTATCACCTGTTTCTCAGGGTCCCACACCCTTAGAACATCAACTTTTCATTATGTTTCGAGTGACATGGTCTTTGAATTGTGAAGTTAGTGAATGGCTGGAATCCCTTCTTTTATGGGAAAGCTAAAGTTTATTATGGGTAACAGTGAGTATGGAACTTAGTGGAGTTTGGTTCAGAAAAGAGATATTTTTCTTAGGGATTATTTAGTGTGGTGCACTATTGCACTGGAGACTTGAGAGTTGAGACACCCCTAAAATGGGTAATGTTTGGTAGAATTATGTGCTTGCAAAGGAAATGCTTGCATGGCAAGGTAATAGACTAATAGCAGGGACTACATTTAGACCTGGTTATTGGACAGGGTAGTCCAATGGATATAGGGTTAGGGTCAAGTTAATATGGTTTTTATTGGGCAGGGCTCTTATTGGACAGGGCCTTTATTGGACAGGGTCATTATAGGGTCAAACTTATACTACAATTATTTTGAAAATTAAAATAGTAATGATACAAAAAATTACGCGTATATCTTCGTATTTACTTGTACTTGCACATGGCTCTTTCATTTTTCATTTTTCATTGCTCGTTTATTGACCCGCCCATTAATGACCCGCTATTGACCCGCGACCCGCTTTTGACCCGCCCATTATCGACCCGCTAAAAATGACCCTTTCAATACCCGACCCTCTTTTAACCCGCACCGACCCTGACCCGCCCCGCCCGATAACCAGGTCTAACTACATTATTATTCCATCTTCCTCACGGTAGAGCAACTGAAAGATAATTTAACTTTTACTCCCTTTTCATGGTTCATTGATTTATGTATATGTTATGTTGTTTTATTTTGAGACTTCACTTGTTAACTATGAAGTTAAGTTTTTGTCTATATAAGTTGGTAGTGGTGATCAGCGAGGTTTGATAGACATAGTTAACAAAACACAACCGACGGTTAGGCAAAGGTTGGTCTGATGGTAGGAGTTGTAGGTTGTAGATTCTTCTTTTATTTTATTTTTATTTGAACATGTTTTATCTCATGTGACGCCTAAAGTGGAAGGTGGATTGTTGATAGTTTGAACGAGCCACATAAGTGTTTAATCCATGAGACAATGCCCTTATTCCTCCACTTTCTTTTCATATACTGTAGTGCTTAAATGCACAACAAACTGGAGAATTGGGTGTGGAGCAAGATATTTTTTACTGCTTGCTGGAATGAGTTGAAGTTGCTGAAAATAGTTCATGATTTTTCCTCTCCAAAAGATTTTTACCATTTAGGAGTTGCAGGCTGCTTGGTGTTTTTTATTTGAATTACCTTTGACCAGGGCTGTATTTGGTCTTAAAGGAACCCCCCTCCCCCAATGTTTTTCTACATATATCGTGAATGTCGTCTCCTGTAGCTTGTACAGCAAAGTGTGTAACTTCGTCTTTATCTGACCTTAATAGTGTTAAATGTTTTGTAGTGTTGTGTTTATCTGACCTTTATAAGCTACGTCTGAACTATTATAGTTACATAGGTGATATTTGTAGTGTTGTGTTTCTGCCTGCTTTTGATACCTGATCGATTTTATCTCTTGATCTATGCACAAAAGAAATGGGGTTATGTGTTGGTGTAATCCTACTCCCCATCAAATGTTGTATGATTGAACCTGAAACTGATTATCAAAGTTTGTTGTTTCAGACAAGAACTTCTGCTAATGCATTCCGGAGGGTCAAAGAGGAGGAAGTGGAATTTGTAGATGAAAGGCTTCAAGATAATTCTTATTGGGCAAAGGTCTCGTGATTCGGAGTTATTCTTTTACATTTATTTCTTTATCCTATATTTAGAGTGGGAACTTTTTAGAGGAGTTAATGATCCTTACAAAATATTTGTAGTGTCTTAACACCGTCCTTATGTTGTCTACAGGATGGTGCAGATAGTGGCTATGGAGCTAAAGCACAGGAAGTTTTGGGGCAGGTTAGAGGAAGGTAAATGTCTCTAACTCTCTACTGTATGCTTCATTTCTTTTTACTTGGAAATGCTTGATCTTCCTTGTTGGCTCGTATCATCAGGGAATATAGGCGTTAATGTGTTGTGCGCCATAGTTAAACTGCTATAAAAAGTATAGTGAGTGATAGTTAATAGAGCCACTTCTTTCCCCCATCATCTCCCAACTCTTTGTTGGTTCATCTGTTCTTTTGCGTTATGAAAGGGTTGATTTGTGAATGCTGTTGTTTTGCTTTCAACCCGAGTCATTGAATATCAACTTATAAAGTAACAATCCCCTCAAAAAAACCTTATAAAGTTACAAGTCAAGAAAGGGGAAGTTATTTCAATTTAGTACTGCTCTCAGAATGAAGTCAGATTGTTTTTCTGTTTCTTTCTTTCTTCCTATCCTGGACTCTCCTCTTATTCCTTGTATTTCAATGGTTTTCTCTGTGTGTTAATGAATGATCTTACTCATTGGCTGGAGATCTATTAACAGTTTGTAACTTTGTTTTTTTTTTGGTGAGAAAGAGGGGCAAAGAACCCCTAAATAAATACAAAGCTAGTCAAACTAAAAAGTAGAAAAACACTACAAAGAAACGAAAGAACAGAAAGCATAAAAACAAAGAAAAGTAAACCAGCAGTAATACTAATCAGGTAGCTAGTGCAGGCACTTTCCGAGCAATAGCTAAGCCACCCAGGTCCTCCAATAAAACGGTTTGAAGACCCTCCGCCTCAAAGATGACCATCTTCTGCTCCAAGTCCACCCCGTGATTAGCAAGCCAGTCTGCCGCACGATTCGCTTCACGATAATTATGATGAACTCCGCCTCAAAGATGACCATCTTCTGCTCCAAGTTCACCCCGTGATTAGCAAACCAGTCCACTTAATCAAAGACTTTCACTTTCGGATAATATGAAAACCCGGTGAAGTAGGAATAGTAGTATTAGTGAGGAGTTGTACTACTATTTCTGAATCCACCGTAAGTTGCACTTGTTTATTGCCTCCATTTCAAGCTAATGCTAGACCATGAAGAACACCCAGTAGCTCTGCCTTCGTGCTAGAACAAGCACCGCACGTAGCAACAAATACCTCAAACAACTCTCCTCTATGTCCTCTTATCAATCCTCCACAGCCCGCCTTCCCCGGGTTTCCCTTGGAGGCACCATCAGTATTAAGTCTCACCGAACCTTCTCTTGGACACATCCATGTGATGAAGATTTCTTCTCTCCCCCTCATTACGCTTACCCATCAATAAATCATCTTTCATCATTGCTTTCTTGATTGATTCCACCCGAGCAATAAGGAAACTGAGTTGATCTTGGAATGTGGAATGTCAAATTCGACCAAAACAACGATTATTACGCCATTTCCAAATCCACCATAGACAACAGCCCAATCCTCGTTCCATGTATGATTATCCTCCCTCAAATTAATTTCCGGCCATTGTAAAAAAGGAGTATCAAGTAATTCTTGGTCATTGATCCATGGGAAATTCCTCCATACCATGACTGCAGGAGGACAAGCTCTAAGCACATGCTCAGTATTTTCTTCCACAGCTCCCCAGGTACGACATCTAGGATCATTAGTAATCGTTCTCAAAAAACGATTTGAATTGGTCATTAGTCTATCTAGAAACACCAACCAAATAAAGAATCTAATCCTTTGAGGGATAGGAAGTTTCCATATTTTACTCCAACAAGGGTGTAATCTTAGGTTTCACCTTTAATCAATTGAAGAGTCGATTTTATCGAGAAGCCACCAGCCACCAGAGGGTTCACCATTAAAACCCTTGTTGGGAGTAATCAATCGCCTCCGGGTCATCTTGTAACTTGAATGAAGCAATGAGTTGTAAAATATTGGGAGGAAGGTACTCAGCAAAGAACTCCAATTTCCAACCTTCATTGATATCCCAAGCATCACTAACTAAAATATCTTGTACTTAGAGGTGGAGGGGCAGTCACAAGTGAGAGAAGTGGCTTGGTCGTGGCCCAAGGTTGCTTCCAAAACAAAGTTCCAGCTCCTTTTCCTACTGCCATGCCAATTCCTTGCTTTAGAATGTTCAGATTGTCTGTGATTCCTCTTCAAGCATTGGAGGAATCACTCTTGGCTTTAAACATATTAACATCACAACGTCCGTCACAATATTTACTACGCAAAACCCTTGACCAAAGAGCATCTGGTTTTGCTAGTAATCTCTATCCAAGTTTAGTGAGAAAGGATGCATTTGCTTGTCTCATAGACCTCAATCCTAAACCTCCAGAATGTTTTGGTTTAGTGACAGTTCCCAAGACACAAGATGCACCCTCCGTTGCTCTTCCGACCCACCCCATAGTAAACAGTGAGAAATACAGTCAATTTCATTGCAAGTCGTCCTTGGCAATTTTGCTGTTTGCATAGCATAATAAGGCATTGAAACTGATGCAAGATTGGATTAAGGTAGCCCATCCTGCCATTGAGATCATTTTAGATTTCCATCCCGCTAATTATCCATTAATCCGGTCCACCATAAATTGATACTCCTTAGAAGTACGCCTGTTGGTACGCCTAAATACAAACCAAGGTCAACGGTTTCCTCTATGTGTTGAGGATATTGCATACCCCACCTTTAATATCTTCAGAAGTGTTTTTAGAGAAAATGACTTTTGATTTTGAATAACTCACTTTGCTTCCTGAGGCATCGCAAAACTGACCAAGACAAGCTGAAATAATTTGGACCTGATCTTCAGAAGCCTTGGCAAACAGATTAAGGTCATCTGCAAAGGCCAAGTTTGAAATAATAGGGCCATTACGGTTGGCCCTAACTGGTTTCCATATCCCCAAACTAATGGCATTCTCAATGAGATGGGCTAACTACATATGACATAAAAATACGGGGATATCGTCACCCTGTCTAACGCCCCTAGACGGGTTACTTCAATTTAGTACTGCTCTCAGAATAAAGTCAGATTGTATTTTCTGTTTCTTTCTTTCTTTCTATCCTGGACTCACTCTTATTCCTTGTATTAAATGGTGTTCTCTCACTCTCTGTGTGTTAATGAATGAACTTACTGATTGGCTGGAGTTCTGTTTATCAGTTTTATCTTCAATATCTGCTGAATTAGGGTTTAGGGTCTTACTCCGTTATGATTTAGGAATTCGGAAAACTACAATTATGTTTTGTACCATTTGTAATAATTTCTTGTGTTCTTGATAGGGATTTTCGCCATGAGAAAACCAAGAAAAAACGTGGAAGCTACAGAGGAGGACAAATCGATCTGGACTCTCATTCAATCAAGTTCAATTATGATGATGAAGAATGACTTGTTGCTTAAATGTTCCTGCATGTGGAACTAGCATCTAAAAAAATTTTGGTCTAATATTTTCTTACATTTTTTTGTACAACCCTTTTGGATTATTGTTGATTGTAATTGACATGATATCGTTGGCATACGGAGTACTTGTATTTCTTTCCTGCATCTTCAAAGTTCAAATATTTAGCTTCCAGCAATTTATTGGAGAAAGCAATATGAATTGAACCATAAGTTCAAATATGTGCGTGATTTCACGTGCCCTTACTGAAAATGTAACACTTGACACCCGTTTGGCTGTGATAAAATACTTCGTCTCTCTGACTGTCTCGTTTTACTTGCCC

mRNA sequence

AAAAAAAAAAAAAAAAAAAAAAGAAGAAAAAAAAGAAGAAAACTCCCTCCCTAAAACCCTAACTACTAGAACCTTCGAAACCCGTTTCTCTCTCCTCGAGCAGAGCCTACATGCAAAATTGCGAGCAAAGGAGCACAGGAGAAGCCGCAACCGCCATTTCTACTCTCTTCACTTTCTTCAAACCTCGTCAAGTTATACTCAATTCATTGTCAAGTATGAAGCTCGACAACAAAAATGGCGACAAAACCCTAATTTCTCTCACTGGTCAGCAAAGGAAACTGCTTCTCCAATCAATTTGTCAATTCCTTGAACAAAGTGGCTTCTCCAAATCTCTTAAGAATTTTTACAAAGAGGCAGAAATCGAGAAAGAGAGTTGGAAGGATTGTTTATTGAATTTGGAAGAGATGTGTTACCAATTTTTGAAGTTGAGGGATGACGCTAAAATTAGTGATTCTGCGGCTTGTGCTGCCAAAGAAATAGCTACTGCCCAGAAGGATGGAAGTATAAATGGTGTTGCATCTGAGGAGCAGGAAAATAACCCTGTTGATGATGTTAATATAAAACATAAGAAAAAAAAGAAAAGCAAAAGTGCTAGTGATTCATCTGCTCAAATTGCTGAGGAAATTGACCCAAAACCCTCAAAAGTCCCTGAAGACGTTTCTTTGATTGTGCCAAGTGAACCTGAAAAGAAATCCAAGAAGAAGAAGCGCAAGGGTGAATCTCAGGAAGAAAACAAAGAGGAACTGCCAGCAGAAGAAACATCAGAAAAACCCGATGTTTCAAAGGAAGAGAAGAAAGAGAAGTCCAAAAGTAAGAAAAAGAAAGAAGATACTTTGAAACCCAATGATTCACCTGTAGAAATTACGGAGGTTGTTAGTGAGAAAAAAATTTCGAAGAAAAGAAAGAAGTCCTCATCTGATGAAAATGAGACCGAATGTGTTGAAAAGGCAGCACTTGATGACTTCAAGCGTAGGAAGACAGAAAATTTAGATGAATCAAATGGAACCATTCTCCCTAAAACACCTAATGGATCTGCCAATGGAGTCTTGGAAAATGGTGATAGCAAGGAGTCGCAGAAGAAGGATAAAACAAAGCAGCTCAATGGTTCTGAGACAAGAACTTCTGCTAATGCATTCCGGAGGGTCAAAGAGGAGGAAGTGGAATTTGTAGATGAAAGGCTTCAAGATAATTCTTATTGGGCAAAGGATGGTGCAGATAGTGGCTATGGAGCTAAAGCACAGGAAGTTTTGGGGCAGGTTAGAGGAAGGGATTTTCGCCATGAGAAAACCAAGAAAAAACGTGGAAGCTACAGAGGAGGACAAATCGATCTGGACTCTCATTCAATCAAGTTCAATTATGATGATGAAGAATGACTTGTTGCTTAAATGTTCCTGCATGTGGAACTAGCATCTAAAAAAATTTTGGTCTAATATTTTCTTACATTTTTTTGTACAACCCTTTTGGATTATTGTTGATTGTAATTGACATGATATCGTTGGCATACGGAGTACTTGTATTTCTTTCCTGCATCTTCAAAGTTCAAATATTTAGCTTCCAGCAATTTATTGGAGAAAGCAATATGAATTGAACCATAAGTTCAAATATGTGCGTGATTTCACGTGCCCTTACTGAAAATGTAACACTTGACACCCGTTTGGCTGTGATAAAATACTTCGTCTCTCTGACTGTCTCGTTTTACTTGCCC

Coding sequence (CDS)

ATGCAAAATTGCGAGCAAAGGAGCACAGGAGAAGCCGCAACCGCCATTTCTACTCTCTTCACTTTCTTCAAACCTCGTCAAGTTATACTCAATTCATTGTCAAGTATGAAGCTCGACAACAAAAATGGCGACAAAACCCTAATTTCTCTCACTGGTCAGCAAAGGAAACTGCTTCTCCAATCAATTTGTCAATTCCTTGAACAAAGTGGCTTCTCCAAATCTCTTAAGAATTTTTACAAAGAGGCAGAAATCGAGAAAGAGAGTTGGAAGGATTGTTTATTGAATTTGGAAGAGATGTGTTACCAATTTTTGAAGTTGAGGGATGACGCTAAAATTAGTGATTCTGCGGCTTGTGCTGCCAAAGAAATAGCTACTGCCCAGAAGGATGGAAGTATAAATGGTGTTGCATCTGAGGAGCAGGAAAATAACCCTGTTGATGATGTTAATATAAAACATAAGAAAAAAAAGAAAAGCAAAAGTGCTAGTGATTCATCTGCTCAAATTGCTGAGGAAATTGACCCAAAACCCTCAAAAGTCCCTGAAGACGTTTCTTTGATTGTGCCAAGTGAACCTGAAAAGAAATCCAAGAAGAAGAAGCGCAAGGGTGAATCTCAGGAAGAAAACAAAGAGGAACTGCCAGCAGAAGAAACATCAGAAAAACCCGATGTTTCAAAGGAAGAGAAGAAAGAGAAGTCCAAAAGTAAGAAAAAGAAAGAAGATACTTTGAAACCCAATGATTCACCTGTAGAAATTACGGAGGTTGTTAGTGAGAAAAAAATTTCGAAGAAAAGAAAGAAGTCCTCATCTGATGAAAATGAGACCGAATGTGTTGAAAAGGCAGCACTTGATGACTTCAAGCGTAGGAAGACAGAAAATTTAGATGAATCAAATGGAACCATTCTCCCTAAAACACCTAATGGATCTGCCAATGGAGTCTTGGAAAATGGTGATAGCAAGGAGTCGCAGAAGAAGGATAAAACAAAGCAGCTCAATGGTTCTGAGACAAGAACTTCTGCTAATGCATTCCGGAGGGTCAAAGAGGAGGAAGTGGAATTTGTAGATGAAAGGCTTCAAGATAATTCTTATTGGGCAAAGGATGGTGCAGATAGTGGCTATGGAGCTAAAGCACAGGAAGTTTTGGGGCAGGTTAGAGGAAGGGATTTTCGCCATGAGAAAACCAAGAAAAAACGTGGAAGCTACAGAGGAGGACAAATCGATCTGGACTCTCATTCAATCAAGTTCAATTATGATGATGAAGAATGA

Protein sequence

MQNCEQRSTGEAATAISTLFTFFKPRQVILNSLSSMKLDNKNGDKTLISLTGQQRKLLLQSICQFLEQSGFSKSLKNFYKEAEIEKESWKDCLLNLEEMCYQFLKLRDDAKISDSAACAAKEIATAQKDGSINGVASEEQENNPVDDVNIKHKKKKKSKSASDSSAQIAEEIDPKPSKVPEDVSLIVPSEPEKKSKKKKRKGESQEENKEELPAEETSEKPDVSKEEKKEKSKSKKKKEDTLKPNDSPVEITEVVSEKKISKKRKKSSSDENETECVEKAALDDFKRRKTENLDESNGTILPKTPNGSANGVLENGDSKESQKKDKTKQLNGSETRTSANAFRRVKEEEVEFVDERLQDNSYWAKDGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLDSHSIKFNYDDEE

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo09882	Spo09882	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo09882.1	Spo09882.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09882.1.exon.1	Spo09882.1.exon.1	exon
Spo09882.1.exon.2	Spo09882.1.exon.2	exon
Spo09882.1.exon.3	Spo09882.1.exon.3	exon
Spo09882.1.exon.4	Spo09882.1.exon.4	exon
Spo09882.1.exon.5	Spo09882.1.exon.5	exon
Spo09882.1.exon.6	Spo09882.1.exon.6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09882.1.utr5p.1	Spo09882.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09882.1.CDS.1	Spo09882.1.CDS.1	CDS
Spo09882.1.CDS.2	Spo09882.1.CDS.2	CDS
Spo09882.1.CDS.3	Spo09882.1.CDS.3	CDS
Spo09882.1.CDS.4	Spo09882.1.CDS.4	CDS
Spo09882.1.CDS.5	Spo09882.1.CDS.5	CDS
Spo09882.1.CDS.6	Spo09882.1.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09882.1.utr3p.1	Spo09882.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo09882.1 vs. NCBI nr
Match: gi|902149078|gb|KNA05299.1| (hypothetical protein SOVF_191730 [Spinacia oleracea])

HSP 1 Score: 761.9 bits (1966), Expect = 5.800e-217
Identity = 419/420 (99.76%), Postives = 419/420 (99.76%), Query Frame = 1


		  
Query: 1   MQNCEQRSTGEAATAISTLFTFFKPRQVILNSLSSMKLDNKNGDKTLISLTGQQRKLLLQ 60
           MQNCEQRSTGEAATAISTLFTFFKPRQVILNSLSSMKLDNKNGDKTLISLTGQQRKLLLQ
Sbjct: 1   MQNCEQRSTGEAATAISTLFTFFKPRQVILNSLSSMKLDNKNGDKTLISLTGQQRKLLLQ 60

Query: 61  SICQFLEQSGFSKSLKNFYKEAEIEKESWKDCLLNLEEMCYQFLKLRDDAKISDSAACAA 120
           SICQFLEQSGFSKSLKNFYKEAEIEKESWKDCLLNLEEMCYQFLKLRDDAKISDSAACAA
Sbjct: 61  SICQFLEQSGFSKSLKNFYKEAEIEKESWKDCLLNLEEMCYQFLKLRDDAKISDSAACAA 120

Query: 121 KEIATAQKDGSINGVASEEQENNPVDDVNIKHKKKKKSKSASDSSAQIAEEIDPKPSKVP 180
           KEIATAQKDGSINGVASEEQENNPVDDVNIKHKKKK SKSASDSSAQIAEEIDPKPSKVP
Sbjct: 121 KEIATAQKDGSINGVASEEQENNPVDDVNIKHKKKK-SKSASDSSAQIAEEIDPKPSKVP 180

Query: 181 EDVSLIVPSEPEKKSKKKKRKGESQEENKEELPAEETSEKPDVSKEEKKEKSKSKKKKED 240
           EDVSLIVPSEPEKKSKKKKRKGESQEENKEELPAEETSEKPDVSKEEKKEKSKSKKKKED
Sbjct: 181 EDVSLIVPSEPEKKSKKKKRKGESQEENKEELPAEETSEKPDVSKEEKKEKSKSKKKKED 240

Query: 241 TLKPNDSPVEITEVVSEKKISKKRKKSSSDENETECVEKAALDDFKRRKTENLDESNGTI 300
           TLKPNDSPVEITEVVSEKKISKKRKKSSSDENETECVEKAALDDFKRRKTENLDESNGTI
Sbjct: 241 TLKPNDSPVEITEVVSEKKISKKRKKSSSDENETECVEKAALDDFKRRKTENLDESNGTI 300

Query: 301 LPKTPNGSANGVLENGDSKESQKKDKTKQLNGSETRTSANAFRRVKEEEVEFVDERLQDN 360
           LPKTPNGSANGVLENGDSKESQKKDKTKQLNGSETRTSANAFRRVKEEEVEFVDERLQDN
Sbjct: 301 LPKTPNGSANGVLENGDSKESQKKDKTKQLNGSETRTSANAFRRVKEEEVEFVDERLQDN 360

Query: 361 SYWAKDGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLDSHSIKFNYDDEE 420
           SYWAKDGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLDSHSIKFNYDDEE
Sbjct: 361 SYWAKDGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLDSHSIKFNYDDEE 419

[Close]

BLAST of Spo09882.1 vs. NCBI nr
Match: gi|731352224|ref|XP_010687435.1| (PREDICTED: nucleolar and coiled-body phosphoprotein 1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 473.8 bits (1218), Expect = 3.200e-130
Identity = 295/453 (65.12%), Postives = 339/453 (74.83%), Query Frame = 1


		  
Query: 1   MQNCE-QRSTGEAATAISTLFTFFKPRQVILNSLSSMKLDNKNGDKTLISLTGQQRKLLL 60
           MQ+CE ++S  EAAT+I  L  FFKPRQVILNS S+    N    K+ ISL+ +QR LLL
Sbjct: 1   MQHCESKKSRVEAATSI--LIPFFKPRQVILNSNSN---SNMKHTKSPISLSSEQRILLL 60

Query: 61  QSICQFLEQSGFSKSLKNFYKEAEIEKESWKDCLLNLEEMCYQFLKLRDDAKISDSAACA 120
           QSICQF EQSGFSK+LK  YKEA+I+KESWK CL+NLEEMCYQ+LK++DD K+S+SA   
Sbjct: 61  QSICQFFEQSGFSKTLKQLYKEADIQKESWKSCLINLEEMCYQYLKMQDDTKLSESAV-- 120

Query: 121 AKEIATAQKDGSINGVASEEQ-------------------ENNPVDDVNIKHKKKKKSKS 180
            KE  T QKDGS+N VAS E                    E +  D V++K KKKKKSKS
Sbjct: 121 -KEQLTKQKDGSVNDVASVENGKKTKENEGDKGKKSQSKVEEHSGDGVDVKPKKKKKSKS 180

Query: 181 ASDSSAQIAEEIDPKPSKVPEDVSLIVPSEPEKKSK---KKKRKGESQEENKEE------ 240
            SD S Q+A E D KPS+ PEDVS+  PSEP KKSK   KKK K  S+EE ++E      
Sbjct: 181 VSDPSEQVAVETDSKPSQNPEDVSMSKPSEPVKKSKDKKKKKHKDHSEEEEEKEDTQVKL 240

Query: 241 --LPAEETSEKPDVS-KEEKKEKSKSKKKKEDTLKPNDSPVEITEVVSEKKISKKRKKSS 300
             LPAEET +KPD   +EEKKEKSKS+KKKEDTL  ND  VE  E   EKK+SKKRKK S
Sbjct: 241 AKLPAEETLDKPDADLQEEKKEKSKSRKKKEDTLNSNDLLVETIEADKEKKVSKKRKKFS 300

Query: 301 SDENETECVEKAALDDFKRRKTENLDESNGTILPKTPNGSANGVLENGDSKESQKKDKTK 360
           S+ENE+ CV+ AA DD KRRKT++LD+ NGTILPKTPNGS NG LE  + KE +KKDK++
Sbjct: 301 SEENESICVDNAASDDSKRRKTDDLDQQNGTILPKTPNGSVNGFLEKDEGKELEKKDKSR 360

Query: 361 QLNG-SETRTSANAFRRVKEEEVEFVDERLQDNSYWAKDGADSGYGAKAQEVLGQVRGRD 420
           Q N  SE RTSA AFRRVKEEEVEFVDERLQDNSYWAKDGADSGYGAKAQEVLGQVRGRD
Sbjct: 361 QYNDLSEQRTSAKAFRRVKEEEVEFVDERLQDNSYWAKDGADSGYGAKAQEVLGQVRGRD 420

[Close]

BLAST of Spo09882.1 vs. NCBI nr
Match: gi|1012000502|ref|XP_015973182.1| (PREDICTED: nucleolar and coiled-body phosphoprotein 1 isoform X1 [Arachis duranensis])

HSP 1 Score: 229.2 bits (583), Expect = 1.400e-56
Identity = 182/423 (43.03%), Postives = 243/423 (57.45%), Query Frame = 1


		  
Query: 23  FKPRQVILNSLSSMKLDNKNGDKTLISLTGQQRKLLLQSICQFLEQSGFSKSLKNFYKEA 82
           F PRQV+L +  +MK  + N            + LL  SI ++LE+S FSK+LK F KEA
Sbjct: 18  FTPRQVLLLTNQTMKQSSSNF-----------KLLLHHSIARYLERSSFSKTLKKFRKEA 77

Query: 83  EIEKESWKDCLLNLEEMCYQFLKLRDDAKISDSAACAAKEIATAQKDGSINGVASEEQEN 142
           +IEK++ +D  ++LEEMC ++L++RD           AK     QK  ++NG  S  +E 
Sbjct: 78  QIEKDNVEDMSIDLEEMCLKYLEIRDKD---------AKSNIQDQKVQAVNGTQSGNKEG 137

Query: 143 NPVDDVNIKHKKKKKSKSASDSSAQIAEEIDPKPSKVPE---------DVSLIVPSEPEK 202
              D      KKKKK+K  S+S A + +      +KV E         D  ++  +E EK
Sbjct: 138 KSKD------KKKKKNKLDSESLASLEDNQVELQTKVTEQKGKDDISADEKIVDGAEAEK 197

Query: 203 KSKKKKRKGESQEENKEELPAEETSEKPDVSKEEKKEKSKSKKKKEDTLKPNDSPVEITE 262
           KSK KK+K   ++EN +    EET          KK+ SK+  K            E+T+
Sbjct: 198 KSKDKKKK--KKKENSQADAVEETGGCNGTVS--KKDNSKASNK------------EVTD 257

Query: 263 VVSEKKISKKRKKSSSDENETECVEKAALDDFKRRKTENLDESNG-TILPKTP------- 322
              EKK +KKRK+ +S+EN  +  +K A ++ KRRK ENLDES G   L +T        
Sbjct: 258 --EEKKDTKKRKRPTSEENGQQVADKKAAEEPKRRKVENLDESKGGEKLAETSVDLGNDS 317

Query: 323 --------NGSANGVLENGDSKESQKKDKTKQLNGSETRTSANAFRRVKEEEVEFVDERL 382
                   NG  NG LE+   K S +K + KQ   S   ++  AF+RV+ ++V+F DERL
Sbjct: 318 NSGQENVANGHTNGQLESAGGKSSAQKSQKKQQMESAETSAKKAFQRVQVDKVQFADERL 377

Query: 383 QDNSYWAKDGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLDSHSIKFNYD 421
           QDNSYWAK GA+ GYGAKA+E+LGQVRGRDFRHEKTKKKRGSYRGGQIDL SHS+KFNY 
Sbjct: 378 QDNSYWAKSGAEVGYGAKAEEILGQVRGRDFRHEKTKKKRGSYRGGQIDLQSHSVKFNYS 396

[Close]

BLAST of Spo09882.1 vs. NCBI nr
Match: gi|1021473987|ref|XP_016201848.1| (PREDICTED: nucleolar and coiled-body phosphoprotein 1 isoform X1 [Arachis ipaensis])

HSP 1 Score: 228.4 bits (581), Expect = 2.300e-56
Identity = 179/424 (42.22%), Postives = 240/424 (56.60%), Query Frame = 1


		  
Query: 23  FKPRQVILNSLSSMKLDNKNGDKTLISLTGQQRKLLLQSICQFLEQSGFSKSLKNFYKEA 82
           F PRQV+L +  +MK  + N            + LL  SI ++LE+S FSK+LK F KEA
Sbjct: 18  FTPRQVLLLTNQTMKQSSSNF-----------KLLLHHSIARYLERSSFSKTLKKFRKEA 77

Query: 83  EIEKESWKDCLLNLEEMCYQFLKLRDDAKISDSAACAAKEIATAQKDGSINGVASEEQEN 142
           +IEK++ +D  ++LEEMC ++L++RD           AK     QKD ++NG  S  +E 
Sbjct: 78  QIEKDNVEDMSIDLEEMCLKYLEIRDKD---------AKSNIQDQKDQAVNGTQSGNKEG 137

Query: 143 NPVDDVNIKHKKKKKSKSASDSSAQIAEEIDPKPSKVPE---------DVSLIVPSEPEK 202
              D      KKKKK+K  S+S A + +      +KV E         D  ++  +E EK
Sbjct: 138 KSKD------KKKKKNKLDSESLASLEDNQVELQTKVTEQKGKDEISADDKIVDGAEAEK 197

Query: 203 KSKKKKRKGESQEENKEELPAEETSE-KPDVSKEEKKEKSKSKKKKEDTLKPNDSPVEIT 262
           KSK KK+K   ++EN +    EET      VSK++  + S  +   E             
Sbjct: 198 KSKDKKKK--KKKENSQADAVEETGGCNGTVSKKDNSKASNREVMDE------------- 257

Query: 263 EVVSEKKISKKRKKSSSDENETECVEKAALDDFKRRKTENLDESNG-------------- 322
               EKK +KKRK+ +S+EN  +  +K A ++ KRRK ENLDES G              
Sbjct: 258 ----EKKDTKKRKRPTSEENGQQVADKKAAEEPKRRKVENLDESKGGEKLAETSVDLGND 317

Query: 323 --TILPKTPNGSANGVLENGDSKESQKKDKTKQLNGSETRTSANAFRRVKEEEVEFVDER 382
             +      NG  NG LE+   K S +K + KQ   S   ++  AF+RV+ ++V+F DER
Sbjct: 318 SNSSQENVANGHTNGQLESAGGKSSAQKSQKKQQMESAETSAKKAFQRVQVDKVQFADER 377

Query: 383 LQDNSYWAKDGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLDSHSIKFNY 421
           LQDNSYWAK GA+ GYGAKA+E+LGQVRGRDFRHEKTKKKRGSYRGGQIDL SHS+KFNY
Sbjct: 378 LQDNSYWAKSGAEVGYGAKAEEILGQVRGRDFRHEKTKKKRGSYRGGQIDLQSHSVKFNY 396

[Close]

BLAST of Spo09882.1 vs. NCBI nr
Match: gi|1012000507|ref|XP_015973189.1| (PREDICTED: nucleolar and coiled-body phosphoprotein 1 isoform X2 [Arachis duranensis])

HSP 1 Score: 225.7 bits (574), Expect = 1.500e-55
Identity = 181/424 (42.69%), Postives = 243/424 (57.31%), Query Frame = 1


		  
Query: 23  FKPRQVILNSLSSMKLDNKNGDKTLISLTGQQRKLLLQSICQFLEQSGFSKSLKNFYKEA 82
           F PRQV+L +  +MK  + N            + LL  SI ++LE+S FSK+LK F KEA
Sbjct: 18  FTPRQVLLLTNQTMKQSSSNF-----------KLLLHHSIARYLERSSFSKTLKKFRKEA 77

Query: 83  EIEKESWKDCLLNLEEMCYQFLKLRD-DAKISDSAACAAKEIATAQKDGSINGVASEEQE 142
           +IEK++ +D  ++LEEMC ++L++RD DAK +              +   +NG  S  +E
Sbjct: 78  QIEKDNVEDMSIDLEEMCLKYLEIRDKDAKSN-----------IQDQKVQVNGTQSGNKE 137

Query: 143 NNPVDDVNIKHKKKKKSKSASDSSAQIAEEIDPKPSKVPE---------DVSLIVPSEPE 202
               D      KKKKK+K  S+S A + +      +KV E         D  ++  +E E
Sbjct: 138 GKSKD------KKKKKNKLDSESLASLEDNQVELQTKVTEQKGKDDISADEKIVDGAEAE 197

Query: 203 KKSKKKKRKGESQEENKEELPAEETSEKPDVSKEEKKEKSKSKKKKEDTLKPNDSPVEIT 262
           KKSK KK+K   ++EN +    EET          KK+ SK+  K            E+T
Sbjct: 198 KKSKDKKKK--KKKENSQADAVEETGGCNGTVS--KKDNSKASNK------------EVT 257

Query: 263 EVVSEKKISKKRKKSSSDENETECVEKAALDDFKRRKTENLDESNG-TILPKTP------ 322
           +   EKK +KKRK+ +S+EN  +  +K A ++ KRRK ENLDES G   L +T       
Sbjct: 258 D--EEKKDTKKRKRPTSEENGQQVADKKAAEEPKRRKVENLDESKGGEKLAETSVDLGND 317

Query: 323 ---------NGSANGVLENGDSKESQKKDKTKQLNGSETRTSANAFRRVKEEEVEFVDER 382
                    NG  NG LE+   K S +K + KQ   S   ++  AF+RV+ ++V+F DER
Sbjct: 318 SNSGQENVANGHTNGQLESAGGKSSAQKSQKKQQMESAETSAKKAFQRVQVDKVQFADER 377

Query: 383 LQDNSYWAKDGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLDSHSIKFNY 421
           LQDNSYWAK GA+ GYGAKA+E+LGQVRGRDFRHEKTKKKRGSYRGGQIDL SHS+KFNY
Sbjct: 378 LQDNSYWAKSGAEVGYGAKAEEILGQVRGRDFRHEKTKKKRGSYRGGQIDLQSHSVKFNY 395

[Close]

BLAST of Spo09882.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDE9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_191730 PE=4 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 4.000e-217
Identity = 419/420 (99.76%), Postives = 419/420 (99.76%), Query Frame = 1


		  
Query: 1   MQNCEQRSTGEAATAISTLFTFFKPRQVILNSLSSMKLDNKNGDKTLISLTGQQRKLLLQ 60
           MQNCEQRSTGEAATAISTLFTFFKPRQVILNSLSSMKLDNKNGDKTLISLTGQQRKLLLQ
Sbjct: 1   MQNCEQRSTGEAATAISTLFTFFKPRQVILNSLSSMKLDNKNGDKTLISLTGQQRKLLLQ 60

Query: 61  SICQFLEQSGFSKSLKNFYKEAEIEKESWKDCLLNLEEMCYQFLKLRDDAKISDSAACAA 120
           SICQFLEQSGFSKSLKNFYKEAEIEKESWKDCLLNLEEMCYQFLKLRDDAKISDSAACAA
Sbjct: 61  SICQFLEQSGFSKSLKNFYKEAEIEKESWKDCLLNLEEMCYQFLKLRDDAKISDSAACAA 120

Query: 121 KEIATAQKDGSINGVASEEQENNPVDDVNIKHKKKKKSKSASDSSAQIAEEIDPKPSKVP 180
           KEIATAQKDGSINGVASEEQENNPVDDVNIKHKKKK SKSASDSSAQIAEEIDPKPSKVP
Sbjct: 121 KEIATAQKDGSINGVASEEQENNPVDDVNIKHKKKK-SKSASDSSAQIAEEIDPKPSKVP 180

Query: 181 EDVSLIVPSEPEKKSKKKKRKGESQEENKEELPAEETSEKPDVSKEEKKEKSKSKKKKED 240
           EDVSLIVPSEPEKKSKKKKRKGESQEENKEELPAEETSEKPDVSKEEKKEKSKSKKKKED
Sbjct: 181 EDVSLIVPSEPEKKSKKKKRKGESQEENKEELPAEETSEKPDVSKEEKKEKSKSKKKKED 240

Query: 241 TLKPNDSPVEITEVVSEKKISKKRKKSSSDENETECVEKAALDDFKRRKTENLDESNGTI 300
           TLKPNDSPVEITEVVSEKKISKKRKKSSSDENETECVEKAALDDFKRRKTENLDESNGTI
Sbjct: 241 TLKPNDSPVEITEVVSEKKISKKRKKSSSDENETECVEKAALDDFKRRKTENLDESNGTI 300

Query: 301 LPKTPNGSANGVLENGDSKESQKKDKTKQLNGSETRTSANAFRRVKEEEVEFVDERLQDN 360
           LPKTPNGSANGVLENGDSKESQKKDKTKQLNGSETRTSANAFRRVKEEEVEFVDERLQDN
Sbjct: 301 LPKTPNGSANGVLENGDSKESQKKDKTKQLNGSETRTSANAFRRVKEEEVEFVDERLQDN 360

Query: 361 SYWAKDGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLDSHSIKFNYDDEE 420
           SYWAKDGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLDSHSIKFNYDDEE
Sbjct: 361 SYWAKDGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLDSHSIKFNYDDEE 419

[Close]

BLAST of Spo09882.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUQ2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g189820 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 2.200e-130
Identity = 295/453 (65.12%), Postives = 339/453 (74.83%), Query Frame = 1


		  
Query: 1   MQNCE-QRSTGEAATAISTLFTFFKPRQVILNSLSSMKLDNKNGDKTLISLTGQQRKLLL 60
           MQ+CE ++S  EAAT+I  L  FFKPRQVILNS S+    N    K+ ISL+ +QR LLL
Sbjct: 1   MQHCESKKSRVEAATSI--LIPFFKPRQVILNSNSN---SNMKHTKSPISLSSEQRILLL 60

Query: 61  QSICQFLEQSGFSKSLKNFYKEAEIEKESWKDCLLNLEEMCYQFLKLRDDAKISDSAACA 120
           QSICQF EQSGFSK+LK  YKEA+I+KESWK CL+NLEEMCYQ+LK++DD K+S+SA   
Sbjct: 61  QSICQFFEQSGFSKTLKQLYKEADIQKESWKSCLINLEEMCYQYLKMQDDTKLSESAV-- 120

Query: 121 AKEIATAQKDGSINGVASEEQ-------------------ENNPVDDVNIKHKKKKKSKS 180
            KE  T QKDGS+N VAS E                    E +  D V++K KKKKKSKS
Sbjct: 121 -KEQLTKQKDGSVNDVASVENGKKTKENEGDKGKKSQSKVEEHSGDGVDVKPKKKKKSKS 180

Query: 181 ASDSSAQIAEEIDPKPSKVPEDVSLIVPSEPEKKSK---KKKRKGESQEENKEE------ 240
            SD S Q+A E D KPS+ PEDVS+  PSEP KKSK   KKK K  S+EE ++E      
Sbjct: 181 VSDPSEQVAVETDSKPSQNPEDVSMSKPSEPVKKSKDKKKKKHKDHSEEEEEKEDTQVKL 240

Query: 241 --LPAEETSEKPDVS-KEEKKEKSKSKKKKEDTLKPNDSPVEITEVVSEKKISKKRKKSS 300
             LPAEET +KPD   +EEKKEKSKS+KKKEDTL  ND  VE  E   EKK+SKKRKK S
Sbjct: 241 AKLPAEETLDKPDADLQEEKKEKSKSRKKKEDTLNSNDLLVETIEADKEKKVSKKRKKFS 300

Query: 301 SDENETECVEKAALDDFKRRKTENLDESNGTILPKTPNGSANGVLENGDSKESQKKDKTK 360
           S+ENE+ CV+ AA DD KRRKT++LD+ NGTILPKTPNGS NG LE  + KE +KKDK++
Sbjct: 301 SEENESICVDNAASDDSKRRKTDDLDQQNGTILPKTPNGSVNGFLEKDEGKELEKKDKSR 360

Query: 361 QLNG-SETRTSANAFRRVKEEEVEFVDERLQDNSYWAKDGADSGYGAKAQEVLGQVRGRD 420
           Q N  SE RTSA AFRRVKEEEVEFVDERLQDNSYWAKDGADSGYGAKAQEVLGQVRGRD
Sbjct: 361 QYNDLSEQRTSAKAFRRVKEEEVEFVDERLQDNSYWAKDGADSGYGAKAQEVLGQVRGRD 420

[Close]

BLAST of Spo09882.1 vs. UniProtKB/TrEMBL
Match: M5XB01_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007564mg PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.800e-53
Identity = 182/416 (43.75%), Postives = 236/416 (56.73%), Query Frame = 1


		  
Query: 7   RSTGEAATAISTLFTFFKPRQVILNSLSSMKLDNKN-GDKTLISLTGQQRKLLLQSICQF 66
           +S       I+     F+PRQV L +L  MK    N    +  +L+  Q+  LL ++ +F
Sbjct: 3   KSLTSTQDTINPTLLAFRPRQVQLANLEDMKHSKPNISSDSTQTLSPGQKGPLLHAVARF 62

Query: 67  LEQSGFSKSLKNFYKEAEIEKESWKDCLLNLEEMCYQFLKLRDDAKISDSAACAAKE-IA 126
           LE +GFSK+LK F  EA+IEK   K+  L+LEEM   + KL  +  +++  +   KE I 
Sbjct: 63  LESNGFSKTLKKFRSEAQIEKSGPKESSLDLEEM---YCKLMCNNGVTNVNSQKKKEDIK 122

Query: 127 TAQKDGSINGVASEEQENNPVDDVNIKHKKKKKSKSASDSSAQIAEEIDPKPSKVPEDVS 186
             +K         EE E N ++      KKKKKSK ASDS A                  
Sbjct: 123 EPEK-------LLEETEKNCME------KKKKKSKVASDSLAS----------------- 182

Query: 187 LIVPSEPEKKSKKKKRKGESQEENKEELPAEETSEKPDVSKEEKKEKSKSKKKKEDTLKP 246
               SE EKK K KK+K     +NK       +S+  D +       + S K   D LK 
Sbjct: 183 ---DSETEKKPKDKKKK-----KNK------SSSDSVDANGIGDTNGTSSTK---DDLKI 242

Query: 247 NDSPVEITEVVSEKKISKKRKKSSSDENETECVEKAALDDFKRRKTENLDESNGTILPKT 306
           +D    +     E K SKKRK+ +S+ N+++  +    ++ KRRK E+L  S GT + + 
Sbjct: 243 SD----VDATGKESKGSKKRKRLASEGNDSQPADNREDEESKRRKVESLKASKGTSVTQL 302

Query: 307 PNGSANGVLENGDSKESQKKDKTKQLNGSETRTSANAFRRVKEEEVEFVDERLQDNSYWA 366
            +G ANG LE    K S KK   KQ NGS+  T+  AF+RVK EEVEF+DE+L+DNSYWA
Sbjct: 303 -DGQANGNLEKSAEKSSIKKSMKKQHNGSDEPTAFKAFQRVKAEEVEFIDEKLRDNSYWA 362

Query: 367 KDGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDLDSHSIKFNYDDEE 421
           KDGA+ GYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQID  SHS+KFNYDDEE
Sbjct: 363 KDGAEIGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQIDQQSHSVKFNYDDEE 363

[Close]

BLAST of Spo09882.1 vs. UniProtKB/TrEMBL
Match: A0A0V0ID29_SOLCH (Putative nucleolar and coiled-body phosphoprotein 1-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.400e-52
Identity = 169/434 (38.94%), Postives = 237/434 (54.61%), Query Frame = 1


		  
Query: 6   QRSTGEAATAISTLFTFFKPRQVILNSLSSMKLDNKNGDKTLISLTGQQRKLLLQSICQF 65
           Q  +  + +A + L   FKPRQV+L   S   L     ++   +  G Q     QSI  +
Sbjct: 12  QNPSTSSPSAAAALLLAFKPRQVVLAESSKSNLVMAKKEQNQENKFGLQ-----QSILHY 71

Query: 66  LEQSGFSKSLKNFYKEAEIEKESWKDCLLNLEEMCYQFLKLRDDAKISDSAACAAKEIAT 125
           L  +GFSK+LK F KE + E +SWK C L+LE++  ++LK   D   +D+ +   KE A 
Sbjct: 72  LHLNGFSKTLKYFLKETQTESDSWKSCSLSLEDLYSKYLKKSTD---NDTISKGDKEPAL 131

Query: 126 AQKDGSINGVASEEQENNPVDDVNIKHKKKKKSKSASDS----SAQIAEEIDPKPSKVPE 185
            Q     +G+  +   +N  D      K KKK +S  +      A   E +D        
Sbjct: 132 CQ-----DGMKGKNISSNNADSQEKVSKNKKKKRSEDNDITVPDASHPESVDKSMKNGAT 191

Query: 186 DVSLIVPSEPE----KKSKKKKRKGESQEENKEELPAEETSEKPDVSKEEKKEKSKSKKK 245
              ++   + +    K+ +KKK+K E + EN + +  +      + +K++KK+KSK K  
Sbjct: 192 AQEVLADDKADGPLRKQKEKKKKKTEEKPENVDPIDNDNNDLTVETTKKDKKKKSKEKSG 251

Query: 246 KEDTLKPNDSPVEITEVVSEKKISKKRKKSSSDENETECVEKAALDDFKRRKTENLDES- 305
             D+                 K SKKRK+ +SDEN  + V+    ++ KRRKTE+L+ES 
Sbjct: 252 ATDS-----------------KDSKKRKRLASDENTDQGVDGVETEESKRRKTEDLEESK 311

Query: 306 ----------NGTILPKTPNGSANGVLENGDSKESQKKDKTKQLNGSETRTSANAFRRVK 365
                     NG ++    +G+    L N   ++S +KD     NGS    + NAF+RVK
Sbjct: 312 VLCTDNGIEQNGEVVEANSSGNNQDELNNSAKQKSSRKD----FNGSAEPKTVNAFQRVK 371

Query: 366 EEEVEFVDERLQDNSYWAKDGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQID 421
            ++VEF D+RL+DNSYWAKDGAD GYGAKAQEVLGQV+GRDFRHEKTKKKRGSYRGG ID
Sbjct: 372 IDQVEFKDDRLKDNSYWAKDGADIGYGAKAQEVLGQVKGRDFRHEKTKKKRGSYRGGIID 411

[Close]

BLAST of Spo09882.1 vs. UniProtKB/TrEMBL
Match: G7JTA4_MEDTR (SRP40, carboxy-terminal domain protein OS=Medicago truncatula GN=MTR_4g127160 PE=2 SV=2)

HSP 1 Score: 214.9 bits (546), Expect = 1.800e-52
Identity = 188/434 (43.32%), Postives = 251/434 (57.83%), Query Frame = 1


		  
Query: 16  ISTLFTFFKPRQVILNSLSSMKLDNKNGDKTLISLTGQQRKLLLQSICQFLEQSGFSKSL 75
           ISTLFTF  PRQV+L++ +      KNG    ++   +Q+ LL QSI  +LE+SGFSK+L
Sbjct: 11  ISTLFTF-TPRQVLLSNRTM-----KNGT---LNPEQKQKLLLNQSIALYLERSGFSKTL 70

Query: 76  KNFYKEAEIEKESWKDCLLNLEEMCYQFLKLRDDAKISDSAACAAKEIATAQKDGSINGV 135
           K F  EA+IE ++ +   ++LEEMC ++L+              +K+  +   D    GV
Sbjct: 71  KKFLSEAKIENDNTEGSTVDLEEMCRKYLE------------TGSKDAKSTINDQKAQGV 130

Query: 136 ASEEQENNPVDDVNIKHKKKKKSKSASDSSAQIAEEIDPK------PSKVPEDVSLIVP- 195
            S+       D+   K KKKKKS   S+S    AE+   +       +KV +D+S     
Sbjct: 131 DSKN------DEEKSKGKKKKKSNVVSESVVDNAEDNQLESPTVGTENKVKDDLSTDAKV 190

Query: 196 ---SEPEKKSK-KKKRKGESQEENK--EELPAEETSEKPDVSKEEKKE-------KSKSK 255
               E EK+SK KKK+  +S  E    E+    E   K D+S + K E       +SK K
Sbjct: 191 DNGVETEKRSKHKKKKNNKSNIEGGAIEQNAVTENKVKDDLSIDAKVENGAETEKRSKHK 250

Query: 256 -KKKEDTLKPNDSPVEITE--------VVSEKKISKKRKKSSSDENETECVEKAALDDFK 315
            KKK+ ++   D+  +I +        +  EKK SKKRK+  S EN+ +  E    ++ K
Sbjct: 251 MKKKDKSISEGDAKEQIGDPDATNEEAIPEEKKDSKKRKRPISKENDEQDTEMKVDEETK 310

Query: 316 RRKTENLDESNGTILPKTPNGSANGVLENGDSKESQKKDKTKQLNGSETRTSANAFRRVK 375
           RRK EN  ES G      PNG +    ENG  ++SQKK   K    SE +    AF+RV+
Sbjct: 311 RRKIENGSESKGEDQSAKPNGHS----ENGAVQKSQKK---KHKESSEQKPVKAAFQRVQ 370

Query: 376 EEEVEFVDERLQDNSYWAKDGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQID 421
            ++VEFVDERLQDNSYWAKDGA+SGYGAKA+E+LGQVRGRDFRHEKTKKKRG+YRGG ID
Sbjct: 371 VDKVEFVDERLQDNSYWAKDGAESGYGAKAEEILGQVRGRDFRHEKTKKKRGTYRGGLID 410

[Close]

BLAST of Spo09882.1 vs. ExPASy Swiss-Prot
Match: NOLC1_HUMAN (Nucleolar and coiled-body phosphoprotein 1 OS=Homo sapiens GN=NOLC1 PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 4.300e-10
Identity = 85/261 (32.57%), Postives = 128/261 (49.04%), Query Frame = 1


		  
Query: 160 SASDSSAQIAEEIDPKPSKV-----PEDVSLIVPSEPEKKSKKKKRKGESQEENKEELPA 219
           S+SDS +  +EE + K SK      P+ V+    + P K +  KK K ES          
Sbjct: 469 SSSDSDSSSSEEEEEKTSKSAVKKKPQKVA--GGAAPSKPASAKKGKAESSN-------- 528

Query: 220 EETSEKPDVSKEEKKEKSKSKKKKEDTLKPNDSPVEITEVVSEKKISKKRKKSSSDENET 279
              S   D S EE++EK K K          +    +T        ++  K + + E E 
Sbjct: 529 ---SSSSDDSSEEEEEKLKGKGSPRPQAPKANGTSALT--------AQNGKAAKNSEEEE 588

Query: 280 ECVEKAALDDFKRRKTENLDESNGTILPKTPNGSANGVLENGDSKESQKKDKTKQLNGSE 339
           E  +KAA+   K    +   ++      +TP       L+  ++   +KK + +      
Sbjct: 589 EEKKKAAVVVSKSGSLKKRKQNEAAKEAETPQAKKIK-LQTPNTFPKRKKGEKR------ 648

Query: 340 TRTSANAFRRVKEEEVEFVDERLQDNSYWAKDGADSGYGAKAQEVLGQVRGRDFRHEKTK 399
              +++ FRRV+EEE+E VD R+ DNS+ AK GA   +G +A +VL   +G+ FRHEKTK
Sbjct: 649 ---ASSPFRRVREEEIE-VDSRVADNSFDAKRGAAGDWGERANQVLKFTKGKSFRHEKTK 697

Query: 400 KKRGSYRGGQIDLDSHSIKFN 416
           KKRGSYRGG I +  +SIKF+
Sbjct: 709 KKRGSYRGGSISVQVNSIKFD 697

[Close]

BLAST of Spo09882.1 vs. ExPASy Swiss-Prot
Match: NOLC1_RAT (Nucleolar and coiled-body phosphoprotein 1 OS=Rattus norvegicus GN=Nolc1 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.800e-9
Identity = 96/315 (30.48%), Postives = 149/315 (47.30%), Query Frame = 1


		  
Query: 119 AAKEIATAQKDGS---------INGVASEEQENNPVDDVNIKHKKKKKSKSASDSSAQIA 178
           AAK +AT ++             +  +SEE+ ++  ++   K     K++  + ++  + 
Sbjct: 408 AAKAVATPKQPAGSGQKPQSRKADSSSSEEESSSSEEEATKKSVTTPKARVTAKAAPSLP 467

Query: 179 EEIDPKPSKVPEDVSLIVPSEPEKKSK-----KKKRKGESQEENKEELPAEETSEKPDVS 238
            +  P+        S    SE EKK+      KKK  G +  +      A   S     S
Sbjct: 468 AKQAPRAGGDSSSDSESSSSEEEKKTPPKPPAKKKAAGAAVPKPTPVKKAAAESSSSSSS 527

Query: 239 KEEKKEKSKSKKKKEDTLKPNDSPVEITEVVSEKKISKKRKKSSSDENETECVEKAAL-- 298
            E+  E+ K K K + T KP          V   +  K  K+S  +E +TE  +KAA   
Sbjct: 528 SEDSSEEEKKKPKSKATPKPQAGKAN---GVPASQNGKAGKESEEEEEDTEQNKKAAGTK 587

Query: 299 --DDFKRRKTENLDESNGTILPKTPNGSANGVLENGDSKESQKKDKTKQLNGSETRTSAN 358
                KR+  E  DE+       TP  S    L+  ++   +KK + +         +++
Sbjct: 588 PGSGKKRKHNETADEA------ATPQ-SKKVKLQTPNTFPKRKKGEKR---------ASS 647

Query: 359 AFRRVKEEEVEFVDERLQDNSYWAKDGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSY 416
            FRRV+EEE+E VD R+ DNS+ AK GA   +G +A +VL   +G+ FRHEKTKKKRGSY
Sbjct: 648 PFRRVREEEIE-VDSRVADNSFDAKRGAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSY 702

[Close]

BLAST of Spo09882.1 vs. TAIR (Arabidopsis)
Match: AT5G57120.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 151.4 bits (381), Expect = 1.300e-36
Identity = 145/375 (38.67%), Postives = 201/375 (53.60%), Query Frame = 1


		  
Query: 49  SLTGQQRKLLLQSICQFLEQSGFSKSLKNFYKEAEIEKESWKDCLLNLEEMCYQFLKLRD 108
           +L  +Q+ LLL+S+ Q+LE+ GFSK  K    EAEIEK+     L +LEE+  +FL  RD
Sbjct: 9   ALESEQKALLLRSVAQYLERCGFSKCFKKLLSEAEIEKKELNTSLPDLEEIFSEFLNKRD 68

Query: 109 DAKISDSAACAAKEIATAQKDGSINGVASEEQENNPVDDVNIKHKKKKKSKSASDSSAQI 168
                            A  +G+      E  EN   D      KKKKK+K   ++  ++
Sbjct: 69  HE---------------AAANGNTEANVVEAVENVKKD------KKKKKNK---ETKVEV 128

Query: 169 AEEIDPKPSKVPEDVSLIVPSEPEKKSKKKKRKGESQEENKEELPAEETSEKPDVSKEEK 228
            EE      KV E  ++I     EKK KK+ +   ++EE  +E  A       D  KE+K
Sbjct: 129 TEE-----EKVKETDAVIEDGVKEKKKKKETKVKVTEEEKVKETDAVIE----DGVKEKK 188

Query: 229 KEKSKSKKKKEDTLKPNDSPVEITEVVSEKKISKKRKKSSSDENETECVEKAALDDFKRR 288
           K+KSKSK  + D  K              +K+SKKRK+S  +E + E  +    ++ KRR
Sbjct: 189 KKKSKSKSVEADDDK--------------EKVSKKRKRSEPEETKEETEDDD--EESKRR 248

Query: 289 KTENLDESNGTILPKTPNGSANGVLENGDSKESQKKDKTKQLNG---SETRTSANAFRRV 348
           K E     N   + +TP        ENG++++S+ K  T Q +G   S ++     F+RV
Sbjct: 249 KKEENVVENDEGVQETPVKETE-TKENGNAEKSETKS-TNQKSGKGLSNSKEPKKPFQRV 308

Query: 349 KEEEVEFVDERLQDNSYWAKDGADSGYGAKAQEVLGQVRGRDFRHEKTKKKRGSYRGGQI 408
             +E+ + +     NSY++K GA+ GYG KAQEVLGQVRGRDFRHEKTKKKRGSYRGG I
Sbjct: 309 NVDEIVYTEN---SNSYYSKGGAEIGYGLKAQEVLGQVRGRDFRHEKTKKKRGSYRGGLI 329

Query: 409 DLDSHSIKFNYDDEE 421
           D +SHS KFN  D+E
Sbjct: 369 DQESHSTKFNNSDDE 329

The following BLAST results are available for this feature:

BLAST of Spo09882.1 vs. NCBI nr
BLAST of Spo09882.1 vs. UniProtKB/TrEMBL
BLAST of Spo09882.1 vs. ExPASy Swiss-Prot
BLAST of Spo09882.1 vs. TAIR (Arabidopsis)

BLAST of Spo09882.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902149078\|gb\|KNA05299.1\|	5.8e-217	99.7	hypothetical protein SOVF_1917...	[more]
gi\|731352224\|ref\|XP_010687435.1\|	3.2e-130	65.1	PREDICTED: nucleolar and coile...	[more]
gi\|1012000502\|ref\|XP_015973182.1\|	1.4e-56	43.0	PREDICTED: nucleolar and coile...	[more]
gi\|1021473987\|ref\|XP_016201848.1\|	2.3e-56	42.2	PREDICTED: nucleolar and coile...	[more]
gi\|1012000507\|ref\|XP_015973189.1\|	1.5e-55	42.6	PREDICTED: nucleolar and coile...	[more]

BLAST of Spo09882.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QDE9_SPIOL	4.0e-217	99.7	Uncharacterized protein OS=Spi...	[more]
A0A0J8BUQ2_BETVU	2.2e-130	65.1	Uncharacterized protein OS=Bet...	[more]
M5XB01_PRUPE	2.8e-53	43.7	Uncharacterized protein OS=Pru...	[more]
A0A0V0ID29_SOLCH	1.4e-52	38.9	Putative nucleolar and coiled-...	[more]
G7JTA4_MEDTR	1.8e-52	43.3	SRP40, carboxy-terminal domain...	[more]

BLAST of Spo09882.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2


Match Name	E-value	Identity	Description
NOLC1_HUMAN	4.3e-10	32.5	Nucleolar and coiled-body phos...	[more]
NOLC1_RAT	2.8e-9	30.4	Nucleolar and coiled-body phos...	[more]

BLAST of Spo09882.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G57120.1	1.3e-36	38.6	FUNCTIONS IN: molecular_functi...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006594	LIS1 homology motif	PROFILE	PS50896	LISH	coord: 54..86 score: 9
IPR007718	SRP40, C-terminal	PFAM	PF05022	SRP40_C	coord: 342..414 score: 1.1
None	No IPR available	unknown	Coil	Coil	coord: 79..99 scor
None	No IPR available	PANTHER	PTHR23216	NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1	coord: 137..218 score: 6.8E-58coord: 277..418 score: 6.8
None	No IPR available	PANTHER	PTHR23216:SF0	NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1	coord: 137..218 score: 6.8E-58coord: 277..418 score: 6.8

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005515	protein binding