Spo10023.1 (mRNA) | SpinachBase

Overview


Name	Spo10023.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	RPM1-interacting protein 4
Location	chr1 : 44549200 .. 44552254 (-)
Sequence length	1710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGAAAGAGAGAGAATTGTCAAACATTAAACAGTTGTCTTGCCAAGTCAATGGTCTCATACCAAATTGTAGTATACTAAATTATAATTATAATTATAATAACAACCCCCCCTTTCATTTGCAATTTTATTCAATCTTCAAACCCACCTTCCCTCATTATATTTCTTCTTCAACTCCTTTGCTCAATAATTGTTCTTCATCATTTTCCTTGAAAAACCCACCTAATTTCCTCTTATTTTTCTACCTTAATTCTTCATTAGTTTTCATATAATATCCTCTGTTTTCCCAGGTTTTGATATATTTCTAAGTTTGCTGCTTTAATGGCTGTAAGTTTCTCGTTATCCTCAACAGTTTCTTATTCTTTGACCTTTTCATACTGCTTTTTTTTTTTTGGATTAACTTTGCTAGATTTCTTGTTTGTTTTCTGGGTTTTGATTATTTCTCATTTGATTTTTTGTTTCGATTTTTTGATGGTGTAAGATCAAAGATGTTTAAGCTGCTTTGCTGAGTCTGTTCATTATAGTTTGTTTAACTGATGATTTGGGTTTGAATTTGCAAGAAAGTTTAGTATGTCAATGATTTTGATGAATTGTCTGCAATATTCTTGTAAATTTGGCACTAACGGCTAGCAATATTCAAATTTGGCACTAACAAAGTATGTTTTTAATGTAAGACTGGAAAGATTTCATAGTAGATAGTATTTTACAAGATGGGGGTTCGGGTTTAACCGTTTAAGCATCGGAATTGTTGTGAATCATCAGCCGATGAGTCGATGACCCTTTTATCGGACAATGATGTTTCCAATGCAATATTTACTTCTGTCAAGTCAATTTTAGTTATACAGACAATACGTCCGTGTCAAATGTAACCTTTTTCCTAGGGTGGGGTGATGATAATATTCATGATTGTTTAATATCTTTAATAGCAACAAATCTATGTTGATATAGAACATAGATACAAATCTAATGAACTAGTAGAACTTCCATTATTAACATGTGTTTCTGGATGGCTTTTGGTTATCTGATTTCCTCTATGCATGATTAGCCTGTAAGAAATGATGATCGTGTTGTTTTATCTGATGTGAATGTGTGCTTATGAAAGTATGGCACCGAACTTTTTTCAGTAGTTTTCGTCATGTATTCTAATTTATAAGTAGTTAACATGAAAATCTGGTTAATGTACTTGAAAATTTACAGTAACTAACTGTTAAAGATGAAGCTTGGTGCTGAAAATGAAGTATTAATTTGAACCTCTCTGTGTTTTCTGATATCAGCAGTCTAAAGTACCCAAGTTTGGTGCGTGGGAAGGTGGAGAAAACTACACAGTTTTCTTCGACAATGCACGAAAGAAGAAGACTAATGGACAGATGATAAACCCGAATGACCCTCAAGACATGGCTGATATGTTTCCACAAATCGGAGGTCCACCACCTCAGGCTCCTAAAGCCGAACCCAAAGGACAACAATCCAAAACCCCTGAATTTGGTGCCTGGGACAATGGAGAGAACGTTGGCTATACCGAGTATTTTGAAAGTAAAAGGAAAACCAAGAACGGTGAACCCACAGCGTCAACAAATGAGCCACAGCTGAACCGAGACATGCATCCTCGTAAGGATCCTCCATCTAAACCAGAAGCAGCACGGGCAAAGGTGCCACCGTTTGGTGGTTGGGAGAATGGAGGTGAAGGTGGTTATACCCAAAGCTTTGAAAATGTTAGGAAGAATAATAATAAGAATGGGCGTACTGTTACACCAGAACCTTCTTCTGACGCCCCTCAGTTGAACCGCGATGTAGGTGAGCCAGCTCCAGCTAAAGAGGGCCGTGCTAAGGTGCCTGAGTTTGGTGGTTGGAATGAGGGAGAAAATGGCGCATACACTGCTTATTTTGAAAATGCTCGGAAAAATAAGAACGCAGGGCCTGTGCCAGACCCTGCTGAGGTCAACAATAGAGCTCGGCCTTCTACTGGTGCTGGAACCAAAAATAAGGCAGATGATCCTCAGTTGAGAAATAATACAAGTAGAGGGTCTAACTATTCTGTGGCTACTTCTGAAGCTCCTTCCAGAAATGGAAAGCAGAACACAGGGGGCCAATCACCAATCCAGCAGAAAGCAGGCAGGCTTCAGCAAAAACCCCCAGCTAGCCGAGGAAGTCAAACTGTAAGTTCTCCTTAGTCTTTTCAAAATGTCCTCCCACCAAACGAGCTTTGGTTTCTTCCTCGTAAGGAAAACATATATAGGGCATGTTTGGTATAAATTTGGGAAAGGAAATAAATAAGGAAAAGGGTAATGTTAACTGTTACCATTATAAGTTGTTTGATATACCTTGGGAAATTAATCACTCGTAACAAATAGAGGTTGATGAGGGTAACAATTTTGTTACCACATGGTTGGGAGATGTAACAAATGATGGTAATTGTTACCCTTAGGAATCTAAGTAATAACTTTGTGTTTAAACCTTTGCAGCCAGAGAGAGGGACAGCTATTCCAGCATGGGGTGTCTGGAACACTGATCCTCAGCAAGCTGAGGGTTTTACGGGTGCTTTCACAAGGGCTAAAGAGGAGAGGAACACGCCCCTTAACTCGAATGCTCCACAACGCTATCAACAACAACATCAGAGATCACAAGAGGAAAAGGTAATTGTTACATCACTGTACTGTAATCTGCAGTATAATAGATTTTGTTTATAGTCACTAATATTTATTTTGGTTTCTGGTTTAATTTACAGAAGGGATGTTGCTTTGGTTGGTTTTGATAATGATCTTCATCTAGTTGTTTATCCAATATATACGATGAAAGCCAAAGGCATGGATAGTCAAATTAAAGAGCAAAAAAAGGAGGTTGAAGAACAAGAATGATGATTTTCTGACTGTGGGTGTTACTGTGTGCTTTTTCATTTCTTTTTGGGGGGGAGGGTTGGGTGGTTCATTAGTTACTATTTTTGAGGATCCTATATATGATTAAGATTCTTTGAAGTTGTTGGCAAATGTTTTGAAGTAGACTATGGACTTCCCTTTGTAACAATCTTGTTATACATAAATTTGAAGCAAATTTCTTG

mRNA sequence

GAAAGAAAGAGAGAGAATTGTCAAACATTAAACAGTTGTCTTGCCAAGTCAATGGTCTCATACCAAATTGTAGTATACTAAATTATAATTATAATTATAATAACAACCCCCCCTTTCATTTGCAATTTTATTCAATCTTCAAACCCACCTTCCCTCATTATATTTCTTCTTCAACTCCTTTGCTCAATAATTGTTCTTCATCATTTTCCTTGAAAAACCCACCTAATTTCCTCTTATTTTTCTACCTTAATTCTTCATTAGTTTTCATATAATATCCTCTGTTTTCCCAGGTTTTGATATATTTCTAAGTTTGCTGCTTTAATGGCTCAGTCTAAAGTACCCAAGTTTGGTGCGTGGGAAGGTGGAGAAAACTACACAGTTTTCTTCGACAATGCACGAAAGAAGAAGACTAATGGACAGATGATAAACCCGAATGACCCTCAAGACATGGCTGATATGTTTCCACAAATCGGAGGTCCACCACCTCAGGCTCCTAAAGCCGAACCCAAAGGACAACAATCCAAAACCCCTGAATTTGGTGCCTGGGACAATGGAGAGAACGTTGGCTATACCGAGTATTTTGAAAGTAAAAGGAAAACCAAGAACGGTGAACCCACAGCGTCAACAAATGAGCCACAGCTGAACCGAGACATGCATCCTCGTAAGGATCCTCCATCTAAACCAGAAGCAGCACGGGCAAAGGTGCCACCGTTTGGTGGTTGGGAGAATGGAGGTGAAGGTGGTTATACCCAAAGCTTTGAAAATGTTAGGAAGAATAATAATAAGAATGGGCGTACTGTTACACCAGAACCTTCTTCTGACGCCCCTCAGTTGAACCGCGATGTAGGTGAGCCAGCTCCAGCTAAAGAGGGCCGTGCTAAGGTGCCTGAGTTTGGTGGTTGGAATGAGGGAGAAAATGGCGCATACACTGCTTATTTTGAAAATGCTCGGAAAAATAAGAACGCAGGGCCTGTGCCAGACCCTGCTGAGGTCAACAATAGAGCTCGGCCTTCTACTGGTGCTGGAACCAAAAATAAGGCAGATGATCCTCAGTTGAGAAATAATACAAGTAGAGGGTCTAACTATTCTGTGGCTACTTCTGAAGCTCCTTCCAGAAATGGAAAGCAGAACACAGGGGGCCAATCACCAATCCAGCAGAAAGCAGGCAGGCTTCAGCAAAAACCCCCAGCTAGCCGAGGAAGTCAAACTCCAGAGAGAGGGACAGCTATTCCAGCATGGGGTGTCTGGAACACTGATCCTCAGCAAGCTGAGGGTTTTACGGGTGCTTTCACAAGGGCTAAAGAGGAGAGGAACACGCCCCTTAACTCGAATGCTCCACAACGCTATCAACAACAACATCAGAGATCACAAGAGGAAAAGAAGGGATGTTGCTTTGGTTGGTTTTGATAATGATCTTCATCTAGTTGTTTATCCAATATATACGATGAAAGCCAAAGGCATGGATAGTCAAATTAAAGAGCAAAAAAAGGAGGTTGAAGAACAAGAATGATGATTTTCTGACTGTGGGTGTTACTGTGTGCTTTTTCATTTCTTTTTGGGGGGGAGGGTTGGGTGGTTCATTAGTTACTATTTTTGAGGATCCTATATATGATTAAGATTCTTTGAAGTTGTTGGCAAATGTTTTGAAGTAGACTATGGACTTCCCTTTGTAACAATCTTGTTATACATAAATTTGAAGCAAATTTCTTG

Coding sequence (CDS)

ATGGCTCAGTCTAAAGTACCCAAGTTTGGTGCGTGGGAAGGTGGAGAAAACTACACAGTTTTCTTCGACAATGCACGAAAGAAGAAGACTAATGGACAGATGATAAACCCGAATGACCCTCAAGACATGGCTGATATGTTTCCACAAATCGGAGGTCCACCACCTCAGGCTCCTAAAGCCGAACCCAAAGGACAACAATCCAAAACCCCTGAATTTGGTGCCTGGGACAATGGAGAGAACGTTGGCTATACCGAGTATTTTGAAAGTAAAAGGAAAACCAAGAACGGTGAACCCACAGCGTCAACAAATGAGCCACAGCTGAACCGAGACATGCATCCTCGTAAGGATCCTCCATCTAAACCAGAAGCAGCACGGGCAAAGGTGCCACCGTTTGGTGGTTGGGAGAATGGAGGTGAAGGTGGTTATACCCAAAGCTTTGAAAATGTTAGGAAGAATAATAATAAGAATGGGCGTACTGTTACACCAGAACCTTCTTCTGACGCCCCTCAGTTGAACCGCGATGTAGGTGAGCCAGCTCCAGCTAAAGAGGGCCGTGCTAAGGTGCCTGAGTTTGGTGGTTGGAATGAGGGAGAAAATGGCGCATACACTGCTTATTTTGAAAATGCTCGGAAAAATAAGAACGCAGGGCCTGTGCCAGACCCTGCTGAGGTCAACAATAGAGCTCGGCCTTCTACTGGTGCTGGAACCAAAAATAAGGCAGATGATCCTCAGTTGAGAAATAATACAAGTAGAGGGTCTAACTATTCTGTGGCTACTTCTGAAGCTCCTTCCAGAAATGGAAAGCAGAACACAGGGGGCCAATCACCAATCCAGCAGAAAGCAGGCAGGCTTCAGCAAAAACCCCCAGCTAGCCGAGGAAGTCAAACTCCAGAGAGAGGGACAGCTATTCCAGCATGGGGTGTCTGGAACACTGATCCTCAGCAAGCTGAGGGTTTTACGGGTGCTTTCACAAGGGCTAAAGAGGAGAGGAACACGCCCCTTAACTCGAATGCTCCACAACGCTATCAACAACAACATCAGAGATCACAAGAGGAAAAGAAGGGATGTTGCTTTGGTTGGTTTTGA

Protein sequence

MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKAEPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPSKPEAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQLNRDVGEPAPAKEGRAKVPEFGGWNEGENGAYTAYFENARKNKNAGPVPDPAEVNNRARPSTGAGTKNKADDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGRLQQKPPASRGSQTPERGTAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQQQHQRSQEEKKGCCFGWF

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo10023	Spo10023	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo10023.1	Spo10023.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10023.1.utr5p.1	Spo10023.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10023.1.CDS.4	Spo10023.1.CDS.4	CDS
Spo10023.1.CDS.3	Spo10023.1.CDS.3	CDS
Spo10023.1.CDS.2	Spo10023.1.CDS.2	CDS
Spo10023.1.CDS.1	Spo10023.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10023.1.utr3p.1	Spo10023.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10023.1.exon.4	Spo10023.1.exon.4	exon
Spo10023.1.exon.3	Spo10023.1.exon.3	exon
Spo10023.1.exon.2	Spo10023.1.exon.2	exon
Spo10023.1.exon.1	Spo10023.1.exon.1	exon

Homology

[Close]

BLAST of Spo10023.1 vs. NCBI nr
Match: gi|902228608|gb|KNA21186.1| (hypothetical protein SOVF_045740 [Spinacia oleracea])

HSP 1 Score: 731.5 bits (1887), Expect = 7.200e-208
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 1

		  
Query: 1   MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKA 60
           MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKA
Sbjct: 1   MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKA 60

Query: 61  EPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPSK 120
           EPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPSK
Sbjct: 61  EPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPSK 120

Query: 121 PEAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQLNRDVGEPAP 180
           PEAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQLNRDVGEPAP
Sbjct: 121 PEAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQLNRDVGEPAP 180

Query: 181 AKEGRAKVPEFGGWNEGENGAYTAYFENARKNKNAGPVPDPAEVNNRARPSTGAGTKNKA 240
           AKEGRAKVPEFGGWNEGENGAYTAYFENARKNKNAGPVPDPAEVNNRARPSTGAGTKNKA
Sbjct: 181 AKEGRAKVPEFGGWNEGENGAYTAYFENARKNKNAGPVPDPAEVNNRARPSTGAGTKNKA 240

Query: 241 DDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGRLQQKPPASRGSQTPERG 300
           DDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGRLQQKPPASRGSQTPERG
Sbjct: 241 DDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGRLQQKPPASRGSQTPERG 300

Query: 301 TAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQQQHQRSQEEKKGCCFGW 360
           TAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQQQHQRSQEEKKGCCFGW
Sbjct: 301 TAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQQQHQRSQEEKKGCCFGW 360

Query: 361 F 362
           F
Sbjct: 361 F 361

[Close]

BLAST of Spo10023.1 vs. NCBI nr
Match: gi|731347565|ref|XP_010685052.1| (PREDICTED: RPM1-interacting protein 4-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 520.0 bits (1338), Expect = 3.300e-144
Identity = 280/378 (74.07%), Postives = 306/378 (80.95%), Query Frame = 1

		  
Query: 1   MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKA 60
           MA SKVPKFGAWEGGENYTV+FDNARKKKTNGQMINPNDP++  +MF Q GGP  QA +A
Sbjct: 1   MATSKVPKFGAWEGGENYTVYFDNARKKKTNGQMINPNDPEENPEMFQQNGGPA-QALRA 60

Query: 61  EPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPS- 120
           +PKGQQ+K P+FGAW+NGENVGYT YFE+KRK KNGEPTAS NEP++NRDM PRKDPP+ 
Sbjct: 61  DPKGQQAKAPQFGAWENGENVGYTAYFENKRKGKNGEPTASQNEPKMNRDMQPRKDPPAQ 120

Query: 121 ------KPEA---ARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQ 180
                 KPE    AR+KVP FG WE  GE GYTQSFENVRKN  KNGRTVTPEPS DAPQ
Sbjct: 121 ARPAPAKPEPQQEARSKVPQFGAWEGAGEAGYTQSFENVRKN--KNGRTVTPEPS-DAPQ 180

Query: 181 LNRDVGEPAPAKEGRAKVPEFGGWNEGENGA-YTAYFENARKNKNAGPVPDPAE------ 240
           LNRDV +P P KEGR KVP+FG W EG+NG  YTAYFENARKNKNAGPV DP +      
Sbjct: 181 LNRDVNDP-PTKEGRQKVPQFGAWEEGDNGGVYTAYFENARKNKNAGPVLDPVDPQLNRD 240

Query: 241 VNNRARPSTGAGTKNKADDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGR 300
           VNNRA+P + AGTKNK DD QLRN  SRGS  SVA S+  SR GKQN GG SPI QKAG+
Sbjct: 241 VNNRAQPPSAAGTKNKVDDHQLRN-ASRGSAPSVAVSDTSSRYGKQNPGGHSPIHQKAGK 300

Query: 301 LQQKPPASRGSQTPERGTAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQ 360
           LQQ+PPA+RGSQTPERG AIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLN N P RYQ
Sbjct: 301 LQQRPPANRGSQTPERGAAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNPNVPPRYQ 360

Query: 361 QQHQRSQEEKKGCCFGWF 362
           QQ +  +  KKGCCFGWF
Sbjct: 361 QQSE--EAGKKGCCFGWF 370

[Close]

BLAST of Spo10023.1 vs. NCBI nr
Match: gi|870853806|gb|KMT05673.1| (hypothetical protein BVRB_7g168030 isoform C [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 243.4 bits (620), Expect = 6.000e-61
Identity = 160/267 (59.93%), Postives = 182/267 (68.16%), Query Frame = 1

		  
Query: 4   SKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADM--FPQIGGPPPQAPKAE 63
           SKV K GA +G E+YTVF DNA+ K  N QMIN NDP   A+   F Q  GP  QAP+ +
Sbjct: 41  SKVSKSGASDGEESYTVFSDNAQNKN-NEQMINSNDPPADAETETFQQNEGPA-QAPRVD 100

Query: 64  PKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDP---- 123
            KGQQ + P+FGA         + YFE+KRK KNGEPTAS N+P++NRD+HPRKDP    
Sbjct: 101 LKGQQCEVPQFGA---------SAYFENKRKDKNGEPTASQNDPKMNRDLHPRKDPPAEA 160

Query: 124 ---PSKP---EAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQL 183
              P+KP   + AR+KV  FG WE  GE G+TQSFENVRK NNKNGRTVTPEP S+APQL
Sbjct: 161 RPAPAKPVPQQEARSKVSQFGAWEGAGEAGHTQSFENVRK-NNKNGRTVTPEP-SNAPQL 220

Query: 184 NRDVGEPAPAKEGRAKVPEFGGWNEGEN-GAYTAYFENARKNKNAGPVPDPAE------V 243
           NRDV  P P KEGR KVP+FG W EG+N G YTAYFENARK K AGPV DP E      V
Sbjct: 221 NRDVNNP-PTKEGRPKVPQFGAWKEGDNDGVYTAYFENARKYK-AGPVLDPVEPQLNRDV 280

Query: 244 NNRARPSTGAGTKNKADDPQLRNNTSR 252
           NNRA+  T A TK KADD QLR    R
Sbjct: 281 NNRAQSPT-ARTKYKADDYQLRKAGER 291

[Close]

BLAST of Spo10023.1 vs. NCBI nr
Match: gi|731347567|ref|XP_010685053.1| (PREDICTED: uncharacterized protein LOC104899541 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 243.4 bits (620), Expect = 6.000e-61
Identity = 160/267 (59.93%), Postives = 182/267 (68.16%), Query Frame = 1

		  
Query: 4   SKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADM--FPQIGGPPPQAPKAE 63
           SKV K GA +G E+YTVF DNA+ K  N QMIN NDP   A+   F Q  GP  QAP+ +
Sbjct: 41  SKVSKSGASDGEESYTVFSDNAQNKN-NEQMINSNDPPADAETETFQQNEGPA-QAPRVD 100

Query: 64  PKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDP---- 123
            KGQQ + P+FGA         + YFE+KRK KNGEPTAS N+P++NRD+HPRKDP    
Sbjct: 101 LKGQQCEVPQFGA---------SAYFENKRKDKNGEPTASQNDPKMNRDLHPRKDPPAEA 160

Query: 124 ---PSKP---EAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQL 183
              P+KP   + AR+KV  FG WE  GE G+TQSFENVRK NNKNGRTVTPEP S+APQL
Sbjct: 161 RPAPAKPVPQQEARSKVSQFGAWEGAGEAGHTQSFENVRK-NNKNGRTVTPEP-SNAPQL 220

Query: 184 NRDVGEPAPAKEGRAKVPEFGGWNEGEN-GAYTAYFENARKNKNAGPVPDPAE------V 243
           NRDV  P P KEGR KVP+FG W EG+N G YTAYFENARK K AGPV DP E      V
Sbjct: 221 NRDVNNP-PTKEGRPKVPQFGAWKEGDNDGVYTAYFENARKYK-AGPVLDPVEPQLNRDV 280

Query: 244 NNRARPSTGAGTKNKADDPQLRNNTSR 252
           NNRA+  T A TK KADD QLR    R
Sbjct: 281 NNRAQSPT-ARTKYKADDYQLRKAGER 291

[Close]

BLAST of Spo10023.1 vs. NCBI nr
Match: gi|870853805|gb|KMT05672.1| (hypothetical protein BVRB_7g168030 isoform B [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 243.4 bits (620), Expect = 6.000e-61
Identity = 160/267 (59.93%), Postives = 182/267 (68.16%), Query Frame = 1

		  
Query: 4   SKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADM--FPQIGGPPPQAPKAE 63
           SKV K GA +G E+YTVF DNA+ K  N QMIN NDP   A+   F Q  GP  QAP+ +
Sbjct: 41  SKVSKSGASDGEESYTVFSDNAQNKN-NEQMINSNDPPADAETETFQQNEGPA-QAPRVD 100

Query: 64  PKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDP---- 123
            KGQQ + P+FGA         + YFE+KRK KNGEPTAS N+P++NRD+HPRKDP    
Sbjct: 101 LKGQQCEVPQFGA---------SAYFENKRKDKNGEPTASQNDPKMNRDLHPRKDPPAEA 160

Query: 124 ---PSKP---EAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQL 183
              P+KP   + AR+KV  FG WE  GE G+TQSFENVRK NNKNGRTVTPEP S+APQL
Sbjct: 161 RPAPAKPVPQQEARSKVSQFGAWEGAGEAGHTQSFENVRK-NNKNGRTVTPEP-SNAPQL 220

Query: 184 NRDVGEPAPAKEGRAKVPEFGGWNEGEN-GAYTAYFENARKNKNAGPVPDPAE------V 243
           NRDV  P P KEGR KVP+FG W EG+N G YTAYFENARK K AGPV DP E      V
Sbjct: 221 NRDVNNP-PTKEGRPKVPQFGAWKEGDNDGVYTAYFENARKYK-AGPVLDPVEPQLNRDV 280

Query: 244 NNRARPSTGAGTKNKADDPQLRNNTSR 252
           NNRA+  T A TK KADD QLR    R
Sbjct: 281 NNRAQSPT-ARTKYKADDYQLRKAGER 291

[Close]

BLAST of Spo10023.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RNT7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_045740 PE=4 SV=1)

HSP 1 Score: 731.5 bits (1887), Expect = 5.000e-208
Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 1

		  
Query: 1   MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKA 60
           MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKA
Sbjct: 1   MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKA 60

Query: 61  EPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPSK 120
           EPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPSK
Sbjct: 61  EPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPSK 120

Query: 121 PEAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQLNRDVGEPAP 180
           PEAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQLNRDVGEPAP
Sbjct: 121 PEAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQLNRDVGEPAP 180

Query: 181 AKEGRAKVPEFGGWNEGENGAYTAYFENARKNKNAGPVPDPAEVNNRARPSTGAGTKNKA 240
           AKEGRAKVPEFGGWNEGENGAYTAYFENARKNKNAGPVPDPAEVNNRARPSTGAGTKNKA
Sbjct: 181 AKEGRAKVPEFGGWNEGENGAYTAYFENARKNKNAGPVPDPAEVNNRARPSTGAGTKNKA 240

Query: 241 DDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGRLQQKPPASRGSQTPERG 300
           DDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGRLQQKPPASRGSQTPERG
Sbjct: 241 DDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGRLQQKPPASRGSQTPERG 300

Query: 301 TAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQQQHQRSQEEKKGCCFGW 360
           TAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQQQHQRSQEEKKGCCFGW
Sbjct: 301 TAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQQQHQRSQEEKKGCCFGW 360

Query: 361 F 362
           F
Sbjct: 361 F 361

[Close]

BLAST of Spo10023.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C033_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g167970 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 2.300e-144
Identity = 280/378 (74.07%), Postives = 306/378 (80.95%), Query Frame = 1

		  
Query: 1   MAQSKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADMFPQIGGPPPQAPKA 60
           MA SKVPKFGAWEGGENYTV+FDNARKKKTNGQMINPNDP++  +MF Q GGP  QA +A
Sbjct: 1   MATSKVPKFGAWEGGENYTVYFDNARKKKTNGQMINPNDPEENPEMFQQNGGPA-QALRA 60

Query: 61  EPKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDPPS- 120
           +PKGQQ+K P+FGAW+NGENVGYT YFE+KRK KNGEPTAS NEP++NRDM PRKDPP+ 
Sbjct: 61  DPKGQQAKAPQFGAWENGENVGYTAYFENKRKGKNGEPTASQNEPKMNRDMQPRKDPPAQ 120

Query: 121 ------KPEA---ARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQ 180
                 KPE    AR+KVP FG WE  GE GYTQSFENVRKN  KNGRTVTPEPS DAPQ
Sbjct: 121 ARPAPAKPEPQQEARSKVPQFGAWEGAGEAGYTQSFENVRKN--KNGRTVTPEPS-DAPQ 180

Query: 181 LNRDVGEPAPAKEGRAKVPEFGGWNEGENGA-YTAYFENARKNKNAGPVPDPAE------ 240
           LNRDV +P P KEGR KVP+FG W EG+NG  YTAYFENARKNKNAGPV DP +      
Sbjct: 181 LNRDVNDP-PTKEGRQKVPQFGAWEEGDNGGVYTAYFENARKNKNAGPVLDPVDPQLNRD 240

Query: 241 VNNRARPSTGAGTKNKADDPQLRNNTSRGSNYSVATSEAPSRNGKQNTGGQSPIQQKAGR 300
           VNNRA+P + AGTKNK DD QLRN  SRGS  SVA S+  SR GKQN GG SPI QKAG+
Sbjct: 241 VNNRAQPPSAAGTKNKVDDHQLRN-ASRGSAPSVAVSDTSSRYGKQNPGGHSPIHQKAGK 300

Query: 301 LQQKPPASRGSQTPERGTAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNSNAPQRYQ 360
           LQQ+PPA+RGSQTPERG AIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLN N P RYQ
Sbjct: 301 LQQRPPANRGSQTPERGAAIPAWGVWNTDPQQAEGFTGAFTRAKEERNTPLNPNVPPRYQ 360

Query: 361 QQHQRSQEEKKGCCFGWF 362
           QQ +  +  KKGCCFGWF
Sbjct: 361 QQSE--EAGKKGCCFGWF 370

[Close]

BLAST of Spo10023.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C0G9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g168030 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.200e-61
Identity = 160/267 (59.93%), Postives = 182/267 (68.16%), Query Frame = 1

		  
Query: 4   SKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADM--FPQIGGPPPQAPKAE 63
           SKV K GA +G E+YTVF DNA+ K  N QMIN NDP   A+   F Q  GP  QAP+ +
Sbjct: 41  SKVSKSGASDGEESYTVFSDNAQNKN-NEQMINSNDPPADAETETFQQNEGPA-QAPRVD 100

Query: 64  PKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDP---- 123
            KGQQ + P+FGA         + YFE+KRK KNGEPTAS N+P++NRD+HPRKDP    
Sbjct: 101 LKGQQCEVPQFGA---------SAYFENKRKDKNGEPTASQNDPKMNRDLHPRKDPPAEA 160

Query: 124 ---PSKP---EAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQL 183
              P+KP   + AR+KV  FG WE  GE G+TQSFENVRK NNKNGRTVTPEP S+APQL
Sbjct: 161 RPAPAKPVPQQEARSKVSQFGAWEGAGEAGHTQSFENVRK-NNKNGRTVTPEP-SNAPQL 220

Query: 184 NRDVGEPAPAKEGRAKVPEFGGWNEGEN-GAYTAYFENARKNKNAGPVPDPAE------V 243
           NRDV  P P KEGR KVP+FG W EG+N G YTAYFENARK K AGPV DP E      V
Sbjct: 221 NRDVNNP-PTKEGRPKVPQFGAWKEGDNDGVYTAYFENARKYK-AGPVLDPVEPQLNRDV 280

Query: 244 NNRARPSTGAGTKNKADDPQLRNNTSR 252
           NNRA+  T A TK KADD QLR    R
Sbjct: 281 NNRAQSPT-ARTKYKADDYQLRKAGER 291

[Close]

BLAST of Spo10023.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ERG5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g168030 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.200e-61
Identity = 160/267 (59.93%), Postives = 182/267 (68.16%), Query Frame = 1

		  
Query: 4   SKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADM--FPQIGGPPPQAPKAE 63
           SKV K GA +G E+YTVF DNA+ K  N QMIN NDP   A+   F Q  GP  QAP+ +
Sbjct: 41  SKVSKSGASDGEESYTVFSDNAQNKN-NEQMINSNDPPADAETETFQQNEGPA-QAPRVD 100

Query: 64  PKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDP---- 123
            KGQQ + P+FGA         + YFE+KRK KNGEPTAS N+P++NRD+HPRKDP    
Sbjct: 101 LKGQQCEVPQFGA---------SAYFENKRKDKNGEPTASQNDPKMNRDLHPRKDPPAEA 160

Query: 124 ---PSKP---EAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQL 183
              P+KP   + AR+KV  FG WE  GE G+TQSFENVRK NNKNGRTVTPEP S+APQL
Sbjct: 161 RPAPAKPVPQQEARSKVSQFGAWEGAGEAGHTQSFENVRK-NNKNGRTVTPEP-SNAPQL 220

Query: 184 NRDVGEPAPAKEGRAKVPEFGGWNEGEN-GAYTAYFENARKNKNAGPVPDPAE------V 243
           NRDV  P P KEGR KVP+FG W EG+N G YTAYFENARK K AGPV DP E      V
Sbjct: 221 NRDVNNP-PTKEGRPKVPQFGAWKEGDNDGVYTAYFENARKYK-AGPVLDPVEPQLNRDV 280

Query: 244 NNRARPSTGAGTKNKADDPQLRNNTSR 252
           NNRA+  T A TK KADD QLR    R
Sbjct: 281 NNRAQSPT-ARTKYKADDYQLRKAGER 291

[Close]

BLAST of Spo10023.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BWW1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g168030 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.200e-61
Identity = 160/267 (59.93%), Postives = 182/267 (68.16%), Query Frame = 1

		  
Query: 4   SKVPKFGAWEGGENYTVFFDNARKKKTNGQMINPNDPQDMADM--FPQIGGPPPQAPKAE 63
           SKV K GA +G E+YTVF DNA+ K  N QMIN NDP   A+   F Q  GP  QAP+ +
Sbjct: 41  SKVSKSGASDGEESYTVFSDNAQNKN-NEQMINSNDPPADAETETFQQNEGPA-QAPRVD 100

Query: 64  PKGQQSKTPEFGAWDNGENVGYTEYFESKRKTKNGEPTASTNEPQLNRDMHPRKDP---- 123
            KGQQ + P+FGA         + YFE+KRK KNGEPTAS N+P++NRD+HPRKDP    
Sbjct: 101 LKGQQCEVPQFGA---------SAYFENKRKDKNGEPTASQNDPKMNRDLHPRKDPPAEA 160

Query: 124 ---PSKP---EAARAKVPPFGGWENGGEGGYTQSFENVRKNNNKNGRTVTPEPSSDAPQL 183
              P+KP   + AR+KV  FG WE  GE G+TQSFENVRK NNKNGRTVTPEP S+APQL
Sbjct: 161 RPAPAKPVPQQEARSKVSQFGAWEGAGEAGHTQSFENVRK-NNKNGRTVTPEP-SNAPQL 220

Query: 184 NRDVGEPAPAKEGRAKVPEFGGWNEGEN-GAYTAYFENARKNKNAGPVPDPAE------V 243
           NRDV  P P KEGR KVP+FG W EG+N G YTAYFENARK K AGPV DP E      V
Sbjct: 221 NRDVNNP-PTKEGRPKVPQFGAWKEGDNDGVYTAYFENARKYK-AGPVLDPVEPQLNRDV 280

Query: 244 NNRARPSTGAGTKNKADDPQLRNNTSR 252
           NNRA+  T A TK KADD QLR    R
Sbjct: 281 NNRAQSPT-ARTKYKADDYQLRKAGER 291

[Close]

BLAST of Spo10023.1 vs. ExPASy Swiss-Prot
Match: RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.000e-8
Identity = 54/206 (26.21%), Postives = 96/206 (46.60%), Query Frame = 1

		  
Query: 185 RAKVPEFGGWNEGENGAYTAYFENARKNKNAGPV---PDPAEVNNRAR---PSTGAGTKN 244
           R+ VP+FG W   EN  YTAYF+ ARK +  G     P+  E N+ ++   P     ++ 
Sbjct: 3   RSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRT 62

Query: 245 K----------------ADDPQLRNNTSRGSNYSVATSEAPSRNGKQNT-GGQSPIQQKA 304
           K                 ++ +L+     G + + A ++   R  + N+   +SP+ + +
Sbjct: 63  KPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYDNKSPLHKNS 122

Query: 305 ----GRLQQKPPASRGSQTPERGTAIPAWGVWN-TDPQQAEGFTGAFTRAKEERNTPLNS 361
               G+ + KP   R  ++PE+ T +P +G W+  +P  A+G+T  F + +EER++  N 
Sbjct: 123 YDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 182

[Close]

BLAST of Spo10023.1 vs. TAIR (Arabidopsis)
Match: AT3G25070.1 (RPM1 interacting protein 4)

HSP 1 Score: 61.6 bits (148), Expect = 1.100e-9
Identity = 54/206 (26.21%), Postives = 96/206 (46.60%), Query Frame = 1

		  
Query: 185 RAKVPEFGGWNEGENGAYTAYFENARKNKNAGPV---PDPAEVNNRAR---PSTGAGTKN 244
           R+ VP+FG W   EN  YTAYF+ ARK +  G     P+  E N+ ++   P     ++ 
Sbjct: 3   RSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSDSQSQAPPHPPSSRT 62

Query: 245 K----------------ADDPQLRNNTSRGSNYSVATSEAPSRNGKQNT-GGQSPIQQKA 304
           K                 ++ +L+     G + + A ++   R  + N+   +SP+ + +
Sbjct: 63  KPEQVDTVRRSREHMRSREESELKQFGDAGGSSNEAANKRQGRASQNNSYDNKSPLHKNS 122

Query: 305 ----GRLQQKPPASRGSQTPERGTAIPAWGVWN-TDPQQAEGFTGAFTRAKEERNTPLNS 361
               G+ + KP   R  ++PE+ T +P +G W+  +P  A+G+T  F + +EER++  N 
Sbjct: 123 YDGTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANV 182

The following BLAST results are available for this feature:

BLAST of Spo10023.1 vs. NCBI nr
BLAST of Spo10023.1 vs. UniProtKB/TrEMBL
BLAST of Spo10023.1 vs. ExPASy Swiss-Prot
BLAST of Spo10023.1 vs. TAIR (Arabidopsis)

BLAST of Spo10023.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902228608\|gb\|KNA21186.1\|	7.2e-208	100.	hypothetical protein SOVF_0457...	[more]
gi\|731347565\|ref\|XP_010685052.1\|	3.3e-144	74.0	PREDICTED: RPM1-interacting pr...	[more]
gi\|870853806\|gb\|KMT05673.1\|	6.0e-61	59.9	hypothetical protein BVRB_7g16...	[more]
gi\|731347567\|ref\|XP_010685053.1\|	6.0e-61	59.9	PREDICTED: uncharacterized pro...	[more]
gi\|870853805\|gb\|KMT05672.1\|	6.0e-61	59.9	hypothetical protein BVRB_7g16...	[more]

BLAST of Spo10023.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RNT7_SPIOL	5.0e-208	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C033_BETVU	2.3e-144	74.0	Uncharacterized protein OS=Bet...	[more]
A0A0J8C0G9_BETVU	4.2e-61	59.9	Uncharacterized protein OS=Bet...	[more]
A0A0J8ERG5_BETVU	4.2e-61	59.9	Uncharacterized protein OS=Bet...	[more]
A0A0J8BWW1_BETVU	4.2e-61	59.9	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo10023.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
RIN4_ARATH	2.0e-8	26.2	RPM1-interacting protein 4 OS=...	[more]

BLAST of Spo10023.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT3G25070.1	1.1e-9	26.2	RPM1 interacting protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 3..29 score: 1.4E-5coord: 297..332 score: 2.6
None	No IPR available	PANTHER	PTHR33159	FAMILY NOT NAMED	coord: 1..66 score: 2.8

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050896	response to stimulus