Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAGGCAGAAAGACGTCCCACCGTCCATTAGTTGCATACCGACCAATTGGACCATCAGATTTAGGGATTCTCCAACAACTTCATGCAGATCTTTTTCCCATCAGGTGGCGTATCCTCTCTTGACTTAGATTGCTTTTGTAAGCAGTTATCTACTTTAGGTAGGTTCTTAGTGGAACTCATCAACTGATTTTGATTCTTTAAGGTATGAGCCTGAGTTCTTCCACAACGTTGTTAATCGTCGTGATATAATTTCATGGGGAGCTGTTGATCGTAGTAGACCCAATTCGCAAAGGGATGATCTTATTGGATTCGTCACTATAAAGATGGTTCCAGCAAGAGAAAGTGAGGTATGGCTCTTGGCTTGTGTCGGTGTGATAACTGGTTTACCAGATATTCGAGAGAGATATTGACTTTCATTTAGGTTGATGCTTCTGTAAATTTGTAATTGAGTGTAAGTGTAGCGGCTCTCACTATTTTGGAACTTTATTCTTGATTTAATTGGCTTGGCTCAAGGTTGCTGATTGCTTATATTGTTGGAAACTGAAGTCATCTATTTTGTTTTATGATGAGTTTTGTTTGGATAACTGACTTTTATTTTCCAGATTTAAGTTCCTTTTTATTTGTTAATATATACTGATATGTGGAAAATATGTGGCTGATTGGCTGATCAGACTACCCTATAGTTCAATGGGCAAGATCAGTAGTCAGTGACAAGCATTCAGGGAAACTGAAATCATCTATTTTGTTTTATGATGAGTTTTATTTGGATAACTGACTTTTATTTTCCAGATTTAAGTTCCTTTTTATTTGTTAATATTTACGGATATGTGGACGATATGTGGCTGATTGGCTGATCAGACTACCCTATAGTTCAATGGGCAAGATCAGTAATCAGTGACAAGCATTCAGGGAAACTTGATGTCTTGTCACTTGGGCTACACTAGCAATGGGCTTTGTACTATAATCAGTTAATTTAATCAATGCAAATTTGGTTTTTATTTGAAGAAGTAATGAATGATAATTATAACTCACCGTAATCATTGCGTGTATAATAAAAATAAAAATAAAACTTTTTCTTGGGGTGCCTGATAGCTTATGCAGCCTGTCATAATTAGGTATTTAGGTTGATACGAGAAGGATATCTGGACTCCGATAGCCATGGTCTCAAAGCCTTAAACCTTGTAGCTATGCCTTGGTCGAATTTGGACATGGTTCTGGAGCTTTTATGAAATTCATTCATTAAAAGGAGCTTCCCCCCTCACTCAGCGATTTTCTTTTCTGGCTGTTTTCGTTGCTCTCTTTCATGATAAATAGGGGTGTAAATGAATTTGCCACAATTTTTGGCTCCCAAAATGTAACAAGCTGTGATATACAGCAGGTTGTATATTGGTATATTCATGCAGTTTTCTCAAACTACATTCTCTTGATTTTGCAGATCACTGATTTGGTTAGATGTGACCCCACCCGATCTGACCAAACTCTAGTTTATATTCTCACCCTGGGAGTAGTTGAAGCATATAGAAAATTTGGCATAGGTATGTTCTTACTCTTAAAGTCCTCACTGATTTATTGGCGTATGTAACCATATTTTTCTTTTTCCTTCAGCTTCGGCGCTGATCAGAGAGGTCATAAGATATGCTAAAACCATCCCGACATGCCGAGCTGCATATTTGCATGTCATATCTTACAATACTCCAGCCATCTATTTGTACAAGAGAATGTCATTCGCGTGTGTAAGAAGGCTTTATGGGTTCTACATCATCGAGGGCCAGCACTATGATGCCTATTTATTTGTGTACTATGTAAATGGTGGCCGATCTCCTTGCTCACCGCTGTAAGTATACATTTACCAAGTATTTCTACCCTGATAGTCGTTAACTTATTTCCTTTGACCTGTTGAATCTTAAATTTGAGTCCCCCTCCCCAGTCCCGTTAATTGCGTGTATAATCATTTCTTGACTTTCTTTTAAATAATCCTGCTTTTTGAAGAAATAGCAGCGAATTCTAATTTCTCTATGTCATTTTGTTTGTATTCTTGGACCTTGTTTGGGTCAAAGATGACACAGTTTGACCATAGATTAATTTATAGATATAAGAGACTTTATGTTTACTCTGTCTCATTTTATCTGTAGCTGTGGAATTTGTGACCTGAAGCTATCAAATTTATTCATGACTATATATTGAAATTTTTTGACTCTAAAGTTATTTTCTTTTAATATGATGGTTGATTGAAAAATTTGTACTTATCATTTTATTTTTCAATAGATTTTATGGCTAATATTGATCCTTAAAGACCATTAAAAAAGTGCACTAGGAATCTAGGACAGTCAAAGTGCAATAGGCAATTCGGAATGGATTATGAGTGTTTCCAATTGAGTGACAGTACATTCTGTAAGTACTTATGTCAAAGATATGTTTTAACCAGCCAGAAATATTACGCTTTCTTCAATCTAAACATATGTTTGGAATTAGGTTTATATTCCGTTGAAGAAAGAGTTTTTCTTTTTTGCCTAAGATCGACTCAACAAAACCTGCAAACATTGGGTACCCCTGCTAGGTCCTTTTTCTTTATTCCTCTTTGCAAATTAGAACTGAACCAGGGACTTGCCTTGAAGGAAGGAAGGGGCACTGCTCTCTGTTTGGATTCTTAGAGATTTGCCATTTTTGTGCAAGGTTGATTACGTAGTATTCTTTTTCGGTTCAATGTTTGACTAAAGATGAAAATAAATTGTGTAGATATCTTTCCGAGACACTATTCTCTCTAGAATTTAGTCCCTGGGGCTCGTCTGCTAAGGTTGAATAGTTTGGAAACTTTGGACTTCCAGAATTTGTTTATGAAGGTCATAGCCAGCTTCTAAAGGCATTTCTAATGAGAATACAGAACAAAAACTTATATGCTGTATGGATCCCGCTGTTGGCTTAGATTTTTAAGAATTCACATGTTCACTTTTTCATGCTGGCATGCATGATAACATTTTATTGCTGAAGCTTGTTCGACATTCTAGGACATTCACATTTCCATATTATACTTTATTTTTGGTCTATAGGGAACCACAAAGGGAAGTGATACGAAGGGGATTCCATCCCAGGTCTTGGGTACAACCCCCCAAGACTAAACTAATTGGCGTCCGTGGGTTTTTTCATGTTGCACAAATGGGGTTTCCTTCTGCCACCCTTTTGCTTGGATGGTTTACTTCATCACGTATTAAGTATGTAAATTTTCCTGAGAAGTGATGTGGTTTTAAGGTGATCCAGGCTGCTTTTACTATTTATGCTTTGAAGCCCTGCCTAAAAGTGAAGACAATGTTTGAGAAAACCGCCATTTTCATTAGCTGAAAGTAAAAAGGTTGTCTTGTAGTCATAAATTTAGGGCTGGCAATCCCTGATCCGACCTGATCCGACCTGATAACCTGACATGAAGTTATTGAGAGAAACCCGAACCCGACCAGAACCGAAACCGAATGACATGAAATCGACCTGATTTGACTCATTTATCATATTTTATAGTAATAGAGTATTAAGTTTTACAATATTTCTGATATTTTTTGACACAACCCGAAATCGACCTGAAACCAAACCCGAACCTGACCCATTGACCCGAATTGCCACCCCTAGTCATAATAGAAAAACAAGGCTGTCTTTTGTTGTTTATAATGTGCTAATTGTGGTTACCTGAACTTACAGAAACACTTTTAAGGGATTCCGAGTTCTCAAAGACACTCGGGTTTAAATTAGAGCAGAAAGCTGACAGTTTGATATATTGAATCTTGTAACCTGAATGTGCAGGGAGATTGTGATAGGGGCAGTCAACTATGTAAAGACTAGTTTGAATTCCGTGGCTGGCAGGATGTGGAGATACGATGAAAGAAAGCCCTGGAGATGGACAAAGTGTAAAGAAAAATGTGGTGTCACAACAACACCTTCTCAGAGCAAGAGGAATCTCGTTAACGAAGGCTCAACCGAGTTTCAATGTGTATGACTTGTACTAATACAGTTTGTATTAGTTTTTTTTTTTTGCCATACGATTCGATTCAAGTTTGATAAATTGGTGTATCTGCCAGTTTGTATTCATCTGTTTTTTATATGAACAGGCAAATAATCCTTTGTTTGTTTGTTGTATATTTCATATGCCAAACAGCCAAAGAGCATACGCATACCGCCTTTTCATTTCTAGCAGTTGTTTTAGTAGGAAGTAGATATGTAAATCCAGTTCAATTTTTTGACAGACAAACGGGCGATTGTGTGGAGCTATATTCATCTAGTTGAGTTTTTTGACATAAAAACAGGAGAATATGTGGAGCACACCCCTTTCCTGCTGTAAAACTGTCTCTTTTCGGTCCTGTGTGACTGTGTGTAATGGGTCACAGGTTCAAATCTCCTCCCCTGATGTAAAACTGTCTCTCTTCGGGCCTGTGTGCAATAGGTTACAGGTTCAAATCTCCTCCCTTGCTGTAAAACTGTCTCTCTTCGGGCCTGTGTGCAATAGGTCACAGGTTTAAATCTCCTCCCTTGCTGTAAAACTGTCTCTCTTCAGGCATGTGTGACTGTGTGCAATAGGTCATAGGCTCAAATCTCCT ATGCTAGGCAGAAAGACGTCCCACCGTCCATTAGTTGCATACCGACCAATTGGACCATCAGATTTAGGGATTCTCCAACAACTTCATGCAGATCTTTTTCCCATCAGGTATGAGCCTGAGTTCTTCCACAACGTTGTTAATCGTCGTGATATAATTTCATGGGGAGCTGTTGATCGTAGTAGACCCAATTCGCAAAGGGATGATCTTATTGGATTCGTCACTATAAAGATGGTTCCAGCAAGAGAAAGTGAGATCACTGATTTGGTTAGATGTGACCCCACCCGATCTGACCAAACTCTAGTTTATATTCTCACCCTGGGAGTAGTTGAAGCATATAGAAAATTTGGCATAGCTTCGGCGCTGATCAGAGAGGTCATAAGATATGCTAAAACCATCCCGACATGCCGAGCTGCATATTTGCATGTCATATCTTACAATACTCCAGCCATCTATTTGTACAAGAGAATGTCATTCGCGTGTGTAAGAAGGCTTTATGGGTTCTACATCATCGAGGGCCAGCACTATGATGCCTATTTATTTGTGTACTATGTAAATGGTGGCCGATCTCCTTGCTCACCGCTGGAGATTGTGATAGGGGCAGTCAACTATGTAAAGACTAGTTTGAATTCCGTGGCTGGCAGGATGTGGAGATACGATGAAAGAAAGCCCTGGAGATGGACAAAGTGTAAAGAAAAATGTGGTGTCACAACAACACCTTCTCAGAGCAAGAGGAATCTCGTTAACGAAGGCTCAACCGAGTTTCAATGTGTATGACTTGTACTAATACAGTTTGTATTAGTTTTTTTTTTTTGCCATACGATTCGATTCAAGTTTGATAAATTGGTGTATCTGCCAGTTTGTATTCATCTGTTTTTTATATGAACAGGCAAATAATCCTTTGTTTGTTTGTTGTATATTTCATATGCCAAACAGCCAAAGAGCATACGCATACCGCCTTTTCATTTCTAGCAGTTGTTTTAGTAGGAAGTAGATATGTAAATCCAGTTCAATTTTTTGACAGACAAACGGGCGATTGTGTGGAGCTATATTCATCTAGTTGAGTTTTTTGACATAAAAACAGGAGAATATGTGGAGCACACCCCTTTCCTGCTGTAAAACTGTCTCTTTTCGGTCCTGTGTGACTGTGTGTAATGGGTCACAGGTTCAAATCTCCTCCCCTGATGTAAAACTGTCTCTCTTCGGGCCTGTGTGCAATAGGTTACAGGTTCAAATCTCCTCCCTTGCTGTAAAACTGTCTCTCTTCGGGCCTGTGTGCAATAGGTCACAGGTTTAAATCTCCTCCCTTGCTGTAAAACTGTCTCTCTTCAGGCATGTGTGACTGTGTGCAATAGGTCATAGGCTCAAATCTCCT ATGCTAGGCAGAAAGACGTCCCACCGTCCATTAGTTGCATACCGACCAATTGGACCATCAGATTTAGGGATTCTCCAACAACTTCATGCAGATCTTTTTCCCATCAGGTATGAGCCTGAGTTCTTCCACAACGTTGTTAATCGTCGTGATATAATTTCATGGGGAGCTGTTGATCGTAGTAGACCCAATTCGCAAAGGGATGATCTTATTGGATTCGTCACTATAAAGATGGTTCCAGCAAGAGAAAGTGAGATCACTGATTTGGTTAGATGTGACCCCACCCGATCTGACCAAACTCTAGTTTATATTCTCACCCTGGGAGTAGTTGAAGCATATAGAAAATTTGGCATAGCTTCGGCGCTGATCAGAGAGGTCATAAGATATGCTAAAACCATCCCGACATGCCGAGCTGCATATTTGCATGTCATATCTTACAATACTCCAGCCATCTATTTGTACAAGAGAATGTCATTCGCGTGTGTAAGAAGGCTTTATGGGTTCTACATCATCGAGGGCCAGCACTATGATGCCTATTTATTTGTGTACTATGTAAATGGTGGCCGATCTCCTTGCTCACCGCTGGAGATTGTGATAGGGGCAGTCAACTATGTAAAGACTAGTTTGAATTCCGTGGCTGGCAGGATGTGGAGATACGATGAAAGAAAGCCCTGGAGATGGACAAAGTGTAAAGAAAAATGTGGTGTCACAACAACACCTTCTCAGAGCAAGAGGAATCTCGTTAACGAAGGCTCAACCGAGTTTCAATGTGTATGA MLGRKTSHRPLVAYRPIGPSDLGILQQLHADLFPIRYEPEFFHNVVNRRDIISWGAVDRSRPNSQRDDLIGFVTIKMVPARESEITDLVRCDPTRSDQTLVYILTLGVVEAYRKFGIASALIREVIRYAKTIPTCRAAYLHVISYNTPAIYLYKRMSFACVRRLYGFYIIEGQHYDAYLFVYYVNGGRSPCSPLEIVIGAVNYVKTSLNSVAGRMWRYDERKPWRWTKCKEKCGVTTTPSQSKRNLVNEGSTEFQCV Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo10309.1 vs. NCBI nr
Match: gi|902226785|gb|KNA20481.1| (hypothetical protein SOVF_052020 isoform A [Spinacia oleracea]) HSP 1 Score: 531.9 bits (1369), Expect = 6.000e-148 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 1
BLAST of Spo10309.1 vs. NCBI nr
Match: gi|902226786|gb|KNA20482.1| (hypothetical protein SOVF_052020 isoform B [Spinacia oleracea]) HSP 1 Score: 522.3 bits (1344), Expect = 4.700e-145 Identity = 257/271 (94.83%), Postives = 257/271 (94.83%), Query Frame = 1
BLAST of Spo10309.1 vs. NCBI nr
Match: gi|731320968|ref|XP_010671095.1| (PREDICTED: histone acetyltransferase MCC1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 443.0 bits (1138), Expect = 3.600e-121 Identity = 213/257 (82.88%), Postives = 234/257 (91.05%), Query Frame = 1
BLAST of Spo10309.1 vs. NCBI nr
Match: gi|596015189|ref|XP_007218781.1| (hypothetical protein PRUPE_ppa009658mg [Prunus persica]) HSP 1 Score: 344.7 bits (883), Expect = 1.400e-91 Identity = 169/258 (65.50%), Postives = 206/258 (79.84%), Query Frame = 1
BLAST of Spo10309.1 vs. NCBI nr
Match: gi|645257749|ref|XP_008234554.1| (PREDICTED: histone acetyltransferase MCC1 [Prunus mume]) HSP 1 Score: 341.7 bits (875), Expect = 1.100e-90 Identity = 168/258 (65.12%), Postives = 205/258 (79.46%), Query Frame = 1
BLAST of Spo10309.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLT9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_052020 PE=4 SV=1) HSP 1 Score: 531.9 bits (1369), Expect = 4.200e-148 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 1
BLAST of Spo10309.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RNP3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_052020 PE=4 SV=1) HSP 1 Score: 522.3 bits (1344), Expect = 3.300e-145 Identity = 257/271 (94.83%), Postives = 257/271 (94.83%), Query Frame = 1
BLAST of Spo10309.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CXL5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g049680 PE=4 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 2.500e-121 Identity = 213/257 (82.88%), Postives = 234/257 (91.05%), Query Frame = 1
BLAST of Spo10309.1 vs. UniProtKB/TrEMBL
Match: M5XLR9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009658mg PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 9.400e-92 Identity = 169/258 (65.50%), Postives = 206/258 (79.84%), Query Frame = 1
BLAST of Spo10309.1 vs. UniProtKB/TrEMBL
Match: A0A067EBK6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025384mg PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 2.300e-90 Identity = 170/257 (66.15%), Postives = 199/257 (77.43%), Query Frame = 1
BLAST of Spo10309.1 vs. ExPASy Swiss-Prot
Match: MCC1_ARATH (Histone acetyltransferase MCC1 OS=Arabidopsis thaliana GN=MCC1 PE=2 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 3.500e-71 Identity = 126/222 (56.76%), Postives = 166/222 (74.77%), Query Frame = 1
BLAST of Spo10309.1 vs. ExPASy Swiss-Prot
Match: NAA60_BOVIN (N-alpha-acetyltransferase 60 OS=Bos taurus GN=NAA60 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.100e-15 Identity = 56/190 (29.47%), Postives = 91/190 (47.89%), Query Frame = 1
BLAST of Spo10309.1 vs. ExPASy Swiss-Prot
Match: NAA60_RAT (N-alpha-acetyltransferase 60 OS=Rattus norvegicus GN=Naa60 PE=2 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.700e-14 Identity = 55/190 (28.95%), Postives = 90/190 (47.37%), Query Frame = 1
BLAST of Spo10309.1 vs. ExPASy Swiss-Prot
Match: NAA60_MOUSE (N-alpha-acetyltransferase 60 OS=Mus musculus GN=Naa60 PE=2 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.700e-14 Identity = 55/190 (28.95%), Postives = 90/190 (47.37%), Query Frame = 1
BLAST of Spo10309.1 vs. ExPASy Swiss-Prot
Match: NAA60_HUMAN (N-alpha-acetyltransferase 60 OS=Homo sapiens GN=NAA60 PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.700e-14 Identity = 55/190 (28.95%), Postives = 92/190 (48.42%), Query Frame = 1
BLAST of Spo10309.1 vs. TAIR (Arabidopsis)
Match: AT5G16800.3 (Acyl-CoA N-acyltransferases (NAT) superfamily protein) HSP 1 Score: 276.6 bits (706), Expect = 1.600e-74 Identity = 136/248 (54.84%), Postives = 180/248 (72.58%), Query Frame = 1
BLAST of Spo10309.1 vs. TAIR (Arabidopsis)
Match: AT3G02980.1 (MEIOTIC CONTROL OF CROSSOVERS1) HSP 1 Score: 269.6 bits (688), Expect = 2.000e-72 Identity = 126/222 (56.76%), Postives = 166/222 (74.77%), Query Frame = 1
BLAST of Spo10309.1 vs. TAIR (Arabidopsis)
Match: AT5G11340.1 (Acyl-CoA N-acyltransferases (NAT) superfamily protein) HSP 1 Score: 50.1 bits (118), Expect = 2.400e-6 Identity = 40/145 (27.59%), Postives = 63/145 (43.45%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10309.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo10309.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo10309.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo10309.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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