Spo10597.1 (mRNA)

Overview
NameSpo10597.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
Description40S ribosomal protein S13
Locationchr1 : 39843022 .. 39850989 (-)
Sequence length660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAACGAAGTGCCCTTACAAGCACCTCTGAATCTGTACGAACACGCACAGAACTTGCCCTGTTGGGCGTATCTCACAGAGCCAATAGAACAGCCATTGCTTCTGCTTGGATTGGAGATGAAGCAAGGACCTTTTGGGCACCTGTCTTTATCTCCACACCACTTCTGCTAATTCTCCAACCTGCTGCAGCCGACCATCTACCATCCCCGTAGTCCCCCTTACACTTCCAAGCCCCATCAACCTCAATGAGAATCATGTCACCTTGCGAATGCACCCCCACCTGCCAGCTCCAGGCCTTGTTCGGGCTGGTAGTGGTGATTCGCACCTTGTCATTCAGACAATGCGAGACCTCCCACCTGCTCATCCATTGTCTAGCTAGCTCAAGTACCGTTACTGCCGAAGCCTTGGTACCTTTAAAAACACATTCATTACGATGGAGCCAAATGCTCCATAAAATCGAAGAGAAGAAAACCACACGATGCCCCGAGTTTCCATCCTGATTCAGAAAGTACAGCAAGAAATTTTTCACCCAACTTCCCACATGAGTTTCTACTGCAGCTAGCCCATGAATCCCAAGAGAACACGACTTCCACACTCTCATGGACAGCTCGCAGTCCCGGAACAAATGGGCCAATGACTCCTCCTTACCACAAAAGACACAAGCGGGCGAAACATCAATGTGCCTTCTCCTTAGATTCTGCTTCGTCGGGATAGCATTATTGATAACCTTCCAAATAAAGATTTTCCACTTTGGGAACATATTGGCTTTCCACCACAAAGACCAGAATTGAGAGACGGTATTTTCTTCCACTTTTCCTGTATTCTTGTGGAACCAGTACCCTGATTTGATGGAATAAGCCCCCGTACTTGACTGACTCCAATCCCACCCATCCTGAGTACCCCGGTTCGAAGTATGAATAGCAAGGATACGACGCGCCGTGCTACTCTGAAAGAGGCTCCAGACTGAGCTAGCATTCCACGAGTGGTTGCTGCATTTTAACTCCGAGACCCAAGTGGGCTTAGTACCAACAAAGGAAGAATGCTCCTTGAACTTTATTCTGTTGTCACCCACCCACACGTGGTCAGTTATGCTTGTAGCTTCTCCATTTCCTACAGTTCTTCTTATTCCACCCTTCATCGAGCTAACACTTTTCATGATACTCCTAGCTCCCCACGAGGCTGCATTAACTCTTCTACCAGAAATGCTATTCTCAAACCAGGTGCTGGGGTATTTCCCGCTGAAAACTCTACTCACGAGAAGATTCGGGCATGTTTTCATTCTCCAAGCTTGGTTGAACAACATGGCATGATTAATGGACTCTATGTTTCTCATACCGAGCCCACCTAAGCTCTTATGCTCTTCTAACAGGGAGGATTTCCTCCAATAAATTGGCCTTTTCGCCATTGAAGCCCCCCACTAGAATTTGATAATCATGGAGGAGATCTTTTTGTGAACGCTCCTTGGCAGTAAGTAAATAGCAAGAATGTGAGAGGCCATGGCCACAAGAATACCATTTATTAGGATCAGTTTACCTGCCGGAGACAAGTGGATAAACTTCCAGTTGGTGAGCCTTTTAGATACTTTTTCTGCAATATTCTAGAACGCCACCGTAGACCGCCCATCAATGTCCATGGGGCAACCCAAATAAGTGCCCATTTTATCGTTACTGTTGACCCCCAAGACTCTCCGAAGAATTCGTTTAAAACGTGGGTGAGTGTTGCCCGAGAAAACAACGAATGACTTCTGTAAATTGACTATTTCGCTCGACAAAGAGAAAAACTGATCCATATTACCTTTCAAAATAGCAAAGTTGTCGATGGAAGCTTTAACAAAGAAGAGGGCATCGTCCGCAAAAAATAAGTGGTTGATATACGGAGCACGTCTCCCTGCCTTTAGCCCCACCAGGGCCTTACACTCTTGGAGAAAATCAAGCTTCCGGGCCAGCACTTCCATACAGAGAATGAACAGGTAAGGGGACAGGGGGTCCCCTTGCCTTAGCCCCACCTGAGGAATAATTTTCCCCGTGGGCTCACCGTTGACCAGAATAGAATACGAGACCGTCGAAACACATTGCAGTAGCCATTGGATCCAATTAGCTGGGAAGAGCATCTCCTCGAGAACTTTTCGTAGAAAATCCCACCTTACTCTGTCATATGCCTTATTTAAGTCAACTTTGAAAATTGCCGCCATAGAAGCTCCCTTCTTCTTTCTGATGGTGTGAAGCATTTCGTGAGCAAGAAGACAATTATCGGACATTGCACGTCCCGGGACAAAAGCATTTTGAGTATCTCCCACCAAATCTTCCACCACTTTCCTTAGTCGCCGGACCAAGCATTTCGATATGATCTTGTAGGTAGTGTTGCACAAACTAATAGGCCGAAATTCTGAGACCAATTCCGGCCTATCCACTTTGGGGATGACCGTTATGAAAGTTTCATTCATCTCCTTCAGCATGAACCCGCTACTAAAAAAACTCATAGCAGCCATTTCAACATCCTTGTGCACCATTTCCCATTTCTGGTGGAAAAACCCCGGTGGGACACCGTCCGGGCCGGGAGATTTGAAGGCTTTGATACTGAAGGCGGCCTCCTTGATTTCCTGTAATGAGAAAGGAACATTGAGAATAGAAAAATGGTTAGCATTAAGTTGTTTCATTGGCGGTTTCCAAGAGTCCCACTGGAGGGAGATATCTCCAAGTGGAACAGATGGGATAAATAGATCTTTGTAAAATCTGAAAAATTCAGCCTTTATCTCACTGCCTTCATATAACCAATCCCCCTGTATGTTCTTGATAGCCCGAATATCGTTCCTGGATTTTCTATCCTTCACACATTTGAAGAAAAAGGAAGTTCCTTGGTCTCCCAACTGATCCCATTTCGAACGGGCCCTTTGTTTCCAGAATGTATTTTTCATTATCACCTCATCTTGTTTTTCTTTTCTTAACACCGCATCTGCTCGCACCATACTATTCACCGTTGGGTCTTCGTGATTGGCCATAAGATCAGTCTGAATTTTGTTCCAGTCAATACGCCTCTCATCTTTGAAGTCTAGGCACCATTTCTTACAAGATCGAACCAGAAACCGCAATTTCCTTTGCAGCACAAACATTGCTGAACCTGACGCTTCATACTCCCAAGCCTTCGAAATAGTATCTCGTGCCTTCTCTGAATTGAGGCACCACTGTTCTAGCTTATACGGTCTCTTCTTTGGAGTATAGTTGGGGGTACAATCAACTACCACTGGACTGTGATCTGATAAAAGAATAGGTAGGTTCCAAACCATCGCATTAGGGTACACCACCCTCCAATCTGAAGATGCATAGGCACGGTCAATCCTCTCCCATATGTTTCCCCCTTCCTCTCTATTATTTGTCCACGTGAATCGAGCCCCGTGATAGACCTCGTGGTGAGAATTTTGGCAGCTAAAGGTGTTGAGGGACCAACCTCACCCTACTTCGAAGTTATCTCTAGCTATCTGAATAAAGTATATGGTGGGGTAGGTGTTAAATGACCGGGTAATGATGTAGATGATAGGGGAGTATTAAGTGGGTATGACTATCGAAATAAAGCTAGAGAGGAAGTGAATACATTTATGTTTGACCTGAATTGTGAAAGGGGAAGAACGTAAATTTATCTATGTACTTATTTATTTATTTTGAATTTGTTAAATAAATAAAACACGGAATGAAGGCAGTAACAGATCTATCCATCATTAGTTTAATAAGGAGATTACCTATAACCTCCATTTTGATGATAAGTGTCTATAGTTAATTTAGAGATGCAAATTTAATATTCATATCACAATTCGTGCATCGCACGGGTACTATACTAGTTATCCTACCTAAAGTCCTAAACTATTAATGTGGGCCTAAGTCTCAATTTATGCCCAAGTAAAGAAAACAGGACGGGCTAAGCCCAGATAAGAAATCTAATAAATCAGAGCCGTTCATCTCTAGGGTTTATCAATCAATATATGTTAAGCCTACCTTTTCGGTTTCAACCCTTCTCTGTTTTGTCTCAGTTGCTCTCTCTTCCTCGCTAGGGTTTTCCTCGCTCTATCTCCTCTCGTCGATCGGAGGTACGTAATCTCACTTCACCTCTCTCCTTCTTTCGACTGTTTTGTTTCCTTCAATTTTGGTAATGATTTTGGGTTTTATGGTTTAGCTTTCTTGATAACATTTGTGATTGATTGTTTTTTTTTATGTTTCTGAAATCATTTGTTTGTGTATCAATTTTATGCTTGAAGTCTCCTTTGTGTAGAGATCAGGGAATTCAACTTTATACCATATTTATCTGAGCTTGTTAGTTGCAGTCTTGCAGATGAGCTTTTAAATTATAACGTATCGTACTCTATTAGAAAATATGAGTTCGGCAAATTGTTGGATGTGGAAAGCCATTGATAACTTGATACACATTGGACTATTAGAGTACTGTTCTTTGATCCGTGTCTGTAAATTACTGTTGCTGGAGGTATCTAGCGCTTTGAATAGCAATGCCTCAATCCATGATTTGATGTTTTGGGGATTAAGGGGGTAATGGGAACAGTTTCAATTCTAATAAAGCTCGAATCGGTAAAACCTTATTTCAATTCTAATCTATTAGATGAAGATGAACTATACTGGGTACTTTATTTCATACACTGATGTCAATAAGCTACAATCTTTCGAATTTTCGACACTGGAACACGGGACTATATTACTCGGTAGCAAATCGTTATGGTTTAAAACTTTAANCACTGATGTCAATAAGCTACAATCTTTCGAATTTTCGACACTGGAACACGGGACTATATTACTCGGTAGCAAATCGTTATGGTTTAAAACTTTAAATCACATTATTAAAACACTTCCCAGCTTTTACAAGAACAATGCAANACCTTATTTCAATTCTAATCTATTAGATGAAGATGAACTATACTGGGTACTTTATTTCATACACTGATGTCAATAAGCTACAATCTTTCGAATTTTCGACACTGGAACACGGGACTATATTACTCCGTAGCAAATCGTTATGGTTTAAAACTTTAAATCACATTATTAAAACACTTCCCAGCTTTTACAANGTAGCAAATCGTTATGGTTTAAAACTTTAAATCACATTATTAAAACACTTCCCAGCTTTTACAAGAACAATGCAATTGAATAACACCTAAGGATCTCATCAAAAGCAGAAGATGTCATTAGGAAAAATAAGAAACAGAAATGAAGTGAACTGAACTGAGTATCAATGTCAATAGCAAATGTGAAGGCTTCCTTTGATGCAACAACTACCTTTTCCTTTCTCAGCTTTAAATTGAAAGCTCTTTATTTTCTTATTACTAATATGATATCTACAAGTTGTTGTATGAGTGAACATTATGTGAGCTTTTTCCAGTGAGTTTATGTTTTGAGAAGTTTAAATTGTTGGTTTACACTGCAGTTAAATCCATTTCACTTGCAAGTTTATGTGTTGAGAATATTGCTTGATCAGCTTCCTTTCTGGTAGATGTGAATGTCTCCTGTTGTGCAAAGACCTAGGCCTTTATTAGTTATAAATTGGTAGCTCTGATTTTCTTNTGAATGTCTCCTGTTGTGCAAAGACCTAGGCCTTTATTAGTTATAAATTGGTAGCTCTGATTTTCTTACTAGTTAATAAAAAAACGCAAGAAAAATAATCATGGGCCTCCCCTCATGGACCAAATCCAACCTTTGAAAGGCAAACCCAAAAACCCACGAAGGCTGGAAATATTTCGGGTATATTAATCCAACTACGTGAATGAACCACTGAAATGCTGGGAAAAATCTAATCTAGGGTTTATTTTTCAGTGTGCGTCGTCAGCAGCAGCAGCAAGGAGAGTAAGAAGCCGCCGCCGTAGCGCCACCCAAACTAGGATCGATTACTCCTTACCTACGCCGTCACCATGGGTCGTATGCACAGTCGCGGGTACTTCTTCTTTTACACTCTCTTTTTCTGACATTTCATCTCTTCTCATTCTTCAATGGCGGCGATTCCTTTTCTTATTTTCTGACCTTTACAGTAAGGGAATGTCCGCCTCTTCTATCCCCTACAAGAGGACCCCACCTTCCTGGCTCAAGATCTCCGCTCAAGATGTAAGTTTTTAGATTTACCTTATTTAGGTAATTGTTCTTGTTGGGTATATTATCCTCTATGATTTGGTTTTGAATTCTGTTTTTTTCTACCTCGATTAACCGTTCAAATTTATTTGATTAGTCTTTTTTTGGGGGGTTTGTTTGGGTATTTTTTATCATATTTTTTGTATTTAAATTTGTGTGTTTCTGTTGANTGGGGGGTTTGTTTGGGTATTTTTTATCATATTTTTTGTATTTAAATTTGTGTGTTTCTGTTGAAGGTGGATGAGAACATTTGTAAGTTTGCAAAGAAGGGTTTGACACCTTCCCAGATTGGTGTGATTTTGAGGGATTCTCATGGTATTGCTCAAGTCAAGAGTGTTACTGGTAACAAGATCCTTCGTATCCTCAAAGCTCATGGTAAGTTATTTTCTGATATCTTTTGAAGATTTGATTGGGACTTGCTTTTTTGTAATTGAATGCAGTCATTGTGGTATATGTTGAATAGGAAGAATATGTGGTTGTAAACGGGAGTAAATGTTTCAGTGAAAGTGANCAAACACAAAAAATGTTCTTTTTTAAATTTTTTTTATTGTCCGGTCCTGTCCTAAATCCGGATTGTTTACATTTTGAGGTCCGGTGTCCGGTCCTGAATCCGCCGGTCCGGACAATTCAGGTCCGGTTCCAGATCGGATTCAGGATCCGTTCAAATTTTGCACACCCCTAGGTACCGTAGTCCGCCAAGTGTAGTGAATTTCACTCCTTTCTCTCTCCCCTTTCCAGTCAAATCTGGCCTTCACATTTGGTTTCTATTTTCAATTTTCAATCTTTTCCTCCTTCTCTCTCCTCCTTTCACCGCGTTTCTGCCCTCTCGCGATTTACCGGAAGAGCTCCGGTGTTGATTAACCTCTCGACATATGTTATGTTAGGTTTTACTCTAATTTGTGGTTCGTTTCCTTTTTTGTATTGAATTTTATTGGTATTTTTTATAGCTAAAATAGTGAAATGTTTGATTTATTCTTGAAATTCCGGGTTGCTAATTTATTCTTCTTACTCGCTGGCTTCGAGCTCAGGCCCCACTTTATGCGGATCGATCTTCTGTTTGAGAAGGTAATTTTCTATCAATACAATTATTTCCAAATTTGTTGGGTTTGTTTTTCCCCCAAATTTTGTGTTCTTAGGGTTTGACTTCAGTACATTGTTGATTAATGAAATGATTACATGAATTATTCTATTCCATTTTTTGTGTAACTTGGATTCGGAAAAAACGATGAATTTTGATCTCCTAAATCAAACACGATAAAATTAAGAAATGAAAGATGTATTTTTTTGCTCTATTTTGTGTTTATCCCAACTCCATTCTATGCACTTATCAAACAAATTTCTTTGATGTTATCTTCAATGAGTTAATCACATTGTATGAAGACTAACAACTATTGTTTGGAGGTTGAGGAGTTGGATAATCAGGCAAATAAGATGGAGACATCGTTACTATCTCATAAATATGGAGGATAATGCTTGAATGGTTATAAATCCTGTAAAATGGTCTCATAGCCTTAAACACACATGTATATATCGTATATCATAGCCTTGATTGTTCAGACACATCGTCCATGCAAAAATATTGTGATTAAGGAAGGTAGAGCATGTAAGTGTGACACAACTTCTGTACATGTGCTCGCAATTACGTGTTCCTCTCCCTATTTTTAGTGGAGAAAACTACACTATAATATTTGTATGATGTAAAGTAAAAAATGTGTAAACAAACCCATGGGTTAATTATCCATATACTTACATGGAATAAAATGAAACATCCAATAATGTCATTTTCCGCAATGATAGTCTTGATCTTATGTTGATTTCAGACAACTTAGTGGAGAAGGATTTGTGTTGA

mRNA sequence

ATGGGGAACGAAGTGCCCTTACAAGCACCTCTGAATCTGTACGAACACGCACAGAACTTGCCCTGTTGGGCGTATCTCACAGAGCCAATAGAACAGCCATTGCTTCTGCTTGGATTGGAGATGAAGCAAGGACCTTTTGGGCACCTTTGCTCTCTCTTCCTCGCTAGGGTTTTCCTCGCTCTATCTCCTCTCGTCGATCGGAGGTACTGTGCGTCGTCAGCAGCAGCAGCAAGGAGAGTAAGAAGCCGCCGCCGTAGCGCCACCCAAACTAGGATCGATTACTCCTTACCTACGCCGTCACCATGGGTCGTATGCACAGTCGCGGGTACTTCTTCTTTTACACTCTCTTTTTCTGACATTTCATCTCTTCTCATTCTTCAATGGCGGCGATTCCTTTTCTTATTTTCTGACCTTTACAGTAAGGGAATGTCCGCCTCTTCTATCCCCTACAAGAGGACCCCACCTTCCTGGCTCAAGATCTCCGCTCAAGATGTGGATGAGAACATTTGTAAGTTTGCAAAGAAGGGTTTGACACCTTCCCAGATTGGTGTGATTTTGAGGGATTCTCATGGTATTGCTCAAGTCAAGAGTGTTACTGGTAACAAGATCCTTCGTATCCTCAAAGCTCATGACAACTTAGTGGAGAAGGATTTGTGTTGA

Coding sequence (CDS)

ATGGGGAACGAAGTGCCCTTACAAGCACCTCTGAATCTGTACGAACACGCACAGAACTTGCCCTGTTGGGCGTATCTCACAGAGCCAATAGAACAGCCATTGCTTCTGCTTGGATTGGAGATGAAGCAAGGACCTTTTGGGCACCTTTGCTCTCTCTTCCTCGCTAGGGTTTTCCTCGCTCTATCTCCTCTCGTCGATCGGAGGTACTGTGCGTCGTCAGCAGCAGCAGCAAGGAGAGTAAGAAGCCGCCGCCGTAGCGCCACCCAAACTAGGATCGATTACTCCTTACCTACGCCGTCACCATGGGTCGTATGCACAGTCGCGGGTACTTCTTCTTTTACACTCTCTTTTTCTGACATTTCATCTCTTCTCATTCTTCAATGGCGGCGATTCCTTTTCTTATTTTCTGACCTTTACAGTAAGGGAATGTCCGCCTCTTCTATCCCCTACAAGAGGACCCCACCTTCCTGGCTCAAGATCTCCGCTCAAGATGTGGATGAGAACATTTGTAAGTTTGCAAAGAAGGGTTTGACACCTTCCCAGATTGGTGTGATTTTGAGGGATTCTCATGGTATTGCTCAAGTCAAGAGTGTTACTGGTAACAAGATCCTTCGTATCCTCAAAGCTCATGACAACTTAGTGGAGAAGGATTTGTGTTGA

Protein sequence

MGNEVPLQAPLNLYEHAQNLPCWAYLTEPIEQPLLLLGLEMKQGPFGHLCSLFLARVFLALSPLVDRRYCASSAAAARRVRSRRRSATQTRIDYSLPTPSPWVVCTVAGTSSFTLSFSDISSLLILQWRRFLFLFSDLYSKGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGNKILRILKAHDNLVEKDLC
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo10597Spo10597gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo10597.1Spo10597.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo10597.1.CDS.5Spo10597.1.CDS.5CDS
Spo10597.1.CDS.4Spo10597.1.CDS.4CDS
Spo10597.1.CDS.3Spo10597.1.CDS.3CDS
Spo10597.1.CDS.2Spo10597.1.CDS.2CDS
Spo10597.1.CDS.1Spo10597.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo10597.1.exon.5Spo10597.1.exon.5exon
Spo10597.1.exon.4Spo10597.1.exon.4exon
Spo10597.1.exon.3Spo10597.1.exon.3exon
Spo10597.1.exon.2Spo10597.1.exon.2exon
Spo10597.1.exon.1Spo10597.1.exon.1exon


Homology
[Close]
BLAST of Spo10597.1 vs. NCBI nr
Match: gi|902210705|gb|KNA16510.1| (hypothetical protein SOVF_088520 [Spinacia oleracea])

HSP 1 Score: 145.6 bits (366), Expect = 1.000e-31
Identity = 71/73 (97.26%), Postives = 71/73 (97.26%), Query Frame = 1 

		  

Query: 141 KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 200
           KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG
Sbjct: 9   KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 68

Query: 201 NKILRILKAHDNL 214
           NKILRILKAH  L
Sbjct: 69  NKILRILKAHGKL 81
[Close]
BLAST of Spo10597.1 vs. NCBI nr
Match: gi|902210704|gb|KNA16509.1| (hypothetical protein SOVF_088510 [Spinacia oleracea])

HSP 1 Score: 145.6 bits (366), Expect = 1.000e-31
Identity = 71/73 (97.26%), Postives = 71/73 (97.26%), Query Frame = 1 

		  

Query: 141 KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 200
           KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG
Sbjct: 9   KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 68

Query: 201 NKILRILKAHDNL 214
           NKILRILKAH  L
Sbjct: 69  NKILRILKAHGKL 81
[Close]
BLAST of Spo10597.1 vs. NCBI nr
Match: gi|763742408|gb|KJB09907.1| (hypothetical protein B456_001G174200, partial [Gossypium raimondii])

HSP 1 Score: 142.1 bits (357), Expect = 1.100e-30
Identity = 74/115 (64.35%), Postives = 80/115 (69.57%), Query Frame = 1 

		  

Query: 96  LPTPSPWVVCTVAGTSSFTLSFSDISSLLILQWRRFLFLFSDLYSKGMSASSIPYKRTPP 155
           L TP PWVVCT  G                               KG+SAS++PYKRTPP
Sbjct: 14  LGTPQPWVVCTAEGC------------------------------KGISASALPYKRTPP 73

Query: 156 SWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGNKILRILKAH 211
           SWLKIS+QDV+ENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG+KILRILKAH
Sbjct: 74  SWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAH 98
[Close]
BLAST of Spo10597.1 vs. NCBI nr
Match: gi|593265380|ref|XP_007134868.1| (hypothetical protein PHAVU_010G082900g [Phaseolus vulgaris])

HSP 1 Score: 139.8 bits (351), Expect = 5.600e-30
Identity = 66/70 (94.29%), Postives = 70/70 (100.00%), Query Frame = 1 

		  

Query: 141 KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 200
           KG+S+S++PYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG
Sbjct: 9   KGISSSALPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 68

Query: 201 NKILRILKAH 211
           NKILRILKAH
Sbjct: 69  NKILRILKAH 78
[Close]
BLAST of Spo10597.1 vs. NCBI nr
Match: gi|1021030230|gb|KZM88015.1| (hypothetical protein DCAR_031522 [Daucus carota subsp. sativus])

HSP 1 Score: 139.4 bits (350), Expect = 7.400e-30
Identity = 65/72 (90.28%), Postives = 71/72 (98.61%), Query Frame = 1 

		  

Query: 139 YSKGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSV 198
           + KGMSAS++PYKRTPPSWLKIS+Q+VD+NICKFAKKGLTPSQIGVILRDSHGIAQVKSV
Sbjct: 7   HGKGMSASALPYKRTPPSWLKISSQEVDDNICKFAKKGLTPSQIGVILRDSHGIAQVKSV 66

Query: 199 TGNKILRILKAH 211
           TGNKILRILKAH
Sbjct: 67  TGNKILRILKAH 78
[Close]
BLAST of Spo10597.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBW3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_088510 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.200e-32
Identity = 71/73 (97.26%), Postives = 71/73 (97.26%), Query Frame = 1 

		  

Query: 141 KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 200
           KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG
Sbjct: 9   KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 68

Query: 201 NKILRILKAHDNL 214
           NKILRILKAH  L
Sbjct: 69  NKILRILKAHGKL 81
[Close]
BLAST of Spo10597.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAJ7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_088520 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.200e-32
Identity = 71/73 (97.26%), Postives = 71/73 (97.26%), Query Frame = 1 

		  

Query: 141 KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 200
           KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG
Sbjct: 9   KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 68

Query: 201 NKILRILKAHDNL 214
           NKILRILKAH  L
Sbjct: 69  NKILRILKAHGKL 81
[Close]
BLAST of Spo10597.1 vs. UniProtKB/TrEMBL
Match: A0A0D2LZT7_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_001G174200 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.900e-31
Identity = 74/115 (64.35%), Postives = 80/115 (69.57%), Query Frame = 1 

		  

Query: 96  LPTPSPWVVCTVAGTSSFTLSFSDISSLLILQWRRFLFLFSDLYSKGMSASSIPYKRTPP 155
           L TP PWVVCT  G                               KG+SAS++PYKRTPP
Sbjct: 14  LGTPQPWVVCTAEGC------------------------------KGISASALPYKRTPP 73

Query: 156 SWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGNKILRILKAH 211
           SWLKIS+QDV+ENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG+KILRILKAH
Sbjct: 74  SWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAH 98
[Close]
BLAST of Spo10597.1 vs. UniProtKB/TrEMBL
Match: V7AML9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G082900g PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.900e-30
Identity = 66/70 (94.29%), Postives = 70/70 (100.00%), Query Frame = 1 

		  

Query: 141 KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 200
           KG+S+S++PYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG
Sbjct: 9   KGISSSALPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 68

Query: 201 NKILRILKAH 211
           NKILRILKAH
Sbjct: 69  NKILRILKAH 78
[Close]
BLAST of Spo10597.1 vs. UniProtKB/TrEMBL
Match: A0A164TV77_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_031522 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.100e-30
Identity = 65/72 (90.28%), Postives = 71/72 (98.61%), Query Frame = 1 

		  

Query: 139 YSKGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSV 198
           + KGMSAS++PYKRTPPSWLKIS+Q+VD+NICKFAKKGLTPSQIGVILRDSHGIAQVKSV
Sbjct: 7   HGKGMSASALPYKRTPPSWLKISSQEVDDNICKFAKKGLTPSQIGVILRDSHGIAQVKSV 66

Query: 199 TGNKILRILKAH 211
           TGNKILRILKAH
Sbjct: 67  TGNKILRILKAH 78
[Close]
BLAST of Spo10597.1 vs. ExPASy Swiss-Prot
Match: RS13_SOYBN (40S ribosomal protein S13 OS=Glycine max GN=RPS13 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.300e-30
Identity = 62/70 (88.57%), Postives = 69/70 (98.57%), Query Frame = 1 

		  

Query: 141 KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 200
           KG+S+S++PYKRTPPSWLKIS+QDV+ENICKFAKKGLTPSQIGVILRDSHGIAQV SVTG
Sbjct: 9   KGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVNSVTG 68

Query: 201 NKILRILKAH 211
           +KILRILKAH
Sbjct: 69  SKILRILKAH 78
[Close]
BLAST of Spo10597.1 vs. ExPASy Swiss-Prot
Match: RS13_PEA (40S ribosomal protein S13 OS=Pisum sativum GN=RPS13 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.800e-29
Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = 1 

		  

Query: 141 KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 200
           KG+S+S++PY+RT PSWLKIS+QDVDE ICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG
Sbjct: 9   KGISSSALPYRRTAPSWLKISSQDVDETICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 68

Query: 201 NKILRILKAH 211
           +KILRILKAH
Sbjct: 69  SKILRILKAH 78
[Close]
BLAST of Spo10597.1 vs. ExPASy Swiss-Prot
Match: RS132_ARATH (40S ribosomal protein S13-2 OS=Arabidopsis thaliana GN=RPS13B PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.000e-28
Identity = 59/70 (84.29%), Postives = 67/70 (95.71%), Query Frame = 1 

		  

Query: 141 KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 200
           KG+SAS++PYKR+ PSWLK ++QDVDE+ICKFAKKGLTPSQIGVILRDSHGI QVKSVTG
Sbjct: 9   KGISASALPYKRSSPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTG 68

Query: 201 NKILRILKAH 211
           +KILRILKAH
Sbjct: 69  SKILRILKAH 78
[Close]
BLAST of Spo10597.1 vs. ExPASy Swiss-Prot
Match: RS131_ARATH (40S ribosomal protein S13-1 OS=Arabidopsis thaliana GN=RPS13A PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.900e-28
Identity = 59/70 (84.29%), Postives = 66/70 (94.29%), Query Frame = 1 

		  

Query: 141 KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 200
           KG+SAS++PYKR+ PSWLK + QDVDE+ICKFAKKGLTPSQIGVILRDSHGI QVKSVTG
Sbjct: 9   KGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTG 68

Query: 201 NKILRILKAH 211
           +KILRILKAH
Sbjct: 69  SKILRILKAH 78
[Close]
BLAST of Spo10597.1 vs. ExPASy Swiss-Prot
Match: RS132_ORYSJ (40S ribosomal protein S13-2 OS=Oryza sativa subsp. japonica GN=Os08g0117300 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.000e-23
Identity = 52/70 (74.29%), Postives = 60/70 (85.71%), Query Frame = 1 

		  

Query: 141 KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 200
           KG+S+S++PYKRTPPSWLK +A DV+E I K AKKG  PSQIGV+LRD HGI  VKSVTG
Sbjct: 9   KGISSSALPYKRTPPSWLKTAASDVEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTG 68

Query: 201 NKILRILKAH 211
           +KILRILKAH
Sbjct: 69  SKILRILKAH 78
[Close]
BLAST of Spo10597.1 vs. TAIR (Arabidopsis)
Match: AT4G00100.1 (ribosomal protein S13A)

HSP 1 Score: 126.3 bits (316), Expect = 2.300e-29
Identity = 59/70 (84.29%), Postives = 67/70 (95.71%), Query Frame = 1 

		  

Query: 141 KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 200
           KG+SAS++PYKR+ PSWLK ++QDVDE+ICKFAKKGLTPSQIGVILRDSHGI QVKSVTG
Sbjct: 9   KGISASALPYKRSSPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTG 68

Query: 201 NKILRILKAH 211
           +KILRILKAH
Sbjct: 69  SKILRILKAH 78
[Close]
BLAST of Spo10597.1 vs. TAIR (Arabidopsis)
Match: AT3G60770.1 (Ribosomal protein S13/S15)

HSP 1 Score: 125.6 bits (314), Expect = 3.900e-29
Identity = 59/70 (84.29%), Postives = 66/70 (94.29%), Query Frame = 1 

		  

Query: 141 KGMSASSIPYKRTPPSWLKISAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG 200
           KG+SAS++PYKR+ PSWLK + QDVDE+ICKFAKKGLTPSQIGVILRDSHGI QVKSVTG
Sbjct: 9   KGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTG 68

Query: 201 NKILRILKAH 211
           +KILRILKAH
Sbjct: 69  SKILRILKAH 78
The following BLAST results are available for this feature:
BLAST of Spo10597.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902210705|gb|KNA16510.1|1.0e-3197.2hypothetical protein SOVF_0885... [more]
gi|902210704|gb|KNA16509.1|1.0e-3197.2hypothetical protein SOVF_0885... [more]
gi|763742408|gb|KJB09907.1|1.1e-3064.3hypothetical protein B456_001G... [more]
gi|593265380|ref|XP_007134868.1|5.6e-3094.2hypothetical protein PHAVU_010... [more]
gi|1021030230|gb|KZM88015.1|7.4e-3090.2hypothetical protein DCAR_0315... [more]
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BLAST of Spo10597.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RBW3_SPIOL7.2e-3297.2Uncharacterized protein OS=Spi... [more]
A0A0K9RAJ7_SPIOL7.2e-3297.2Uncharacterized protein OS=Spi... [more]
A0A0D2LZT7_GOSRA7.9e-3164.3Uncharacterized protein (Fragm... [more]
V7AML9_PHAVU3.9e-3094.2Uncharacterized protein OS=Pha... [more]
A0A164TV77_DAUCA5.1e-3090.2Uncharacterized protein OS=Dau... [more]
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BLAST of Spo10597.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RS13_SOYBN3.3e-3088.540S ribosomal protein S13 OS=G... [more]
RS13_PEA2.8e-2987.140S ribosomal protein S13 OS=P... [more]
RS132_ARATH4.0e-2884.240S ribosomal protein S13-2 OS... [more]
RS131_ARATH6.9e-2884.240S ribosomal protein S13-1 OS... [more]
RS132_ORYSJ3.0e-2374.240S ribosomal protein S13-2 OS... [more]
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BLAST of Spo10597.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G00100.12.3e-2984.2ribosomal protein S13A[more]
AT3G60770.13.9e-2984.2Ribosomal protein S13/S15[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012606Ribosomal protein S13/S15, N-terminalPFAMPF08069Ribosomal_S13_Ncoord: 140..192
score: 1.3
IPR012606Ribosomal protein S13/S15, N-terminalSMARTSM01386Ribosomal_S13_N_2coord: 140..192
score: 2.7
NoneNo IPR availablePANTHERPTHR11885RIBOSOMAL PROTEIN S15P/S13Ecoord: 141..210
score: 7.4

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome