Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACGAAGACGACGTCGTTGCTTGAGTGTCTACCATACGGTATATAATTTCAGGCTATAAATAGAGGAGTAGTAGAAGGTATCATATTCATCACTCACAAGCATATAGTACTAGTCATATACGGAGTACTCCTACATTACAATCAAATTAAAGTTTCTAAATATTATCTCTCTAGGTATAATACTCTAATTTATTTCTTTGTTTTGTTTTTTTTTTGTTTTTTTTTTTTTTTTTGAGGGAACTGCAGTTTCTCTTTACTCCGTATTACTACGTATTTAGGAAATGTTTACTGATTCTTGTTAATGGTGGTTTTTTTTGAGTAACAAATTGAATATAACCAAGCGAGACTTGACTCACTTGATAAGATTCTTACCCTAATATATATCCCAGAGGTATAATGTTTGGAATCTTACCAAGTGGGAATGCTTTGGGGTAAGATTTTCCCTAACCACAAGTATTGGTCTGGCCGTAACTGCATAAGGGTTAAGGTTTGGATAGGGTAATTCTGTTGTCGTAAATATAAAAGTGTATTAAGTAGGTACACCATATATAATACGGAATATTGATTTTACTAAAGAAGTGTAGGTTTGGATTAATTGGTTAAAAAATGTGTAGTACATAGTTAGTCAGTTCCTAAAGTTATATTTATATATATGGTTCCAATCCATTTTTGGACTAATTTTTCTTGTGTTGCAGGCTACATAATACAAGATGTCGTCAAGACCAGAGATCAGTGAGGAGCAGAGGGTGATTTTAGATAAGTTGAAGGCAGAGTTGCCGGAAGCTGTGATGCCTGTGACAGCCTCAGGCTTATTGGGCGATGATAAAAAGGGAAAATCAACCCAAGTGTATGTAAGAGCCAGTATGCTGAATAATGGCGTGGCAACGATGAATTATCGTGACCACAAACTTTGGTCTGGTTCCATTATTGGCAGCTACCCTGATGATATTGAAATGAATGGTGCGCGTTCGACTACTCACCAAGGTGTTCCACCAAAAGATACAGAGGGTTCCATGGGGGCGATAGTGTTTGTTGGCCCTAACGTACAAGATGGTGCAGATGATTGCGCATGGGTCTTGGCATGGAGCGTCCTTGGTGATGGCACCACTGAAAACAAGGTAAATATACCACACTGTACGAATTTGTATCTTTAATGACAACCTAATAACGACGGGTCAAAAATCTCGTCGCAAAAGCCTTTTGCGACAGAGATAACAACCAAACAAAGATGGGAACAACCGTCGCAAATGTCTTTTACAGCGGATTAACGACGGGATTTTCCATTAACGACGGTTCCATTTTATGATGGGTTCGCTACAGAAAATCCCGTCGTTAATCAACGACTATTGGCCTTTCGCGTCGGAATTTCCCGTCATTAATGATACAATTTCTTGTAGTGCCAATTTCCATTCTATTACAAATATAAATATTTATATTTTTACACTAAATAATAATATTGGAATTAATTTGTTTCTACATTAATTTCATTTCAGATTTACGTGGAAACTGGTCCTAGTTCCAAGTATATTAAAGGTAAAATTAATTGGGGTGTCATCAAAACCAGTCTGGAACACTCAAAAGACGTGAGTTCTTGCCCTGCCAATCATGGTGCTGAGGCATCTGCTTCAATTGATAGTGGTGATTCTCCCGCGGCTGCTGCAACCTTCGTTGTCAATAATGTTAAGTAGCAGTACCAACATTAAGTATGATCTTCATCAAGACAAAGGGTCGGCGATTAATGGAGTAATATTTATATATATCAAATAAATTACTCCTTATAACCTTTTGTTTATTGTGTGTGTTTGTGATTTTTCTTTTTTTACTTTCAACTCGCAATCGCAAGTGTGTTTATTTCTAAGTTGTAACCCCCTTTCTACAATTTATTTACTTATCTCTATTCTATAAGCCAGCTCCTGAGGGTATTGTAGTAAATTAACTTTTCGTGTCCACTTGACAAAACTCAATTCTACCCTCTCCCGTTTGCCAGTTAACTAACAATACAAATTTTCGTTTCCACTTGCAAATTACCCATTAATCACGCATAAATATTGATTTATATTAGGAAGCCCAGCTTATCTCACG CACGAAGACGACGTCGTTGCTTGAGTGTCTACCATACGGTATATAATTTCAGGCTATAAATAGAGGAGTAGTAGAAGGTATCATATTCATCACTCACAAGCATATAGTACTAGTCATATACGGAGTACTCCTACATTACAATCAAATTAAAGTTTCTAAATATTATCTCTCTAGGCTACATAATACAAGATGTCGTCAAGACCAGAGATCAGTGAGGAGCAGAGGGTGATTTTAGATAAGTTGAAGGCAGAGTTGCCGGAAGCTGTGATGCCTGTGACAGCCTCAGGCTTATTGGGCGATGATAAAAAGGGAAAATCAACCCAAGTGTATGTAAGAGCCAGTATGCTGAATAATGGCGTGGCAACGATGAATTATCGTGACCACAAACTTTGGTCTGGTTCCATTATTGGCAGCTACCCTGATGATATTGAAATGAATGGTGCGCGTTCGACTACTCACCAAGGTGTTCCACCAAAAGATACAGAGGGTTCCATGGGGGCGATAGTGTTTGTTGGCCCTAACGTACAAGATGGTGCAGATGATTGCGCATGGGTCTTGGCATGGAGCGTCCTTGGTGATGGCACCACTGAAAACAAGATTTACGTGGAAACTGGTCCTAGTTCCAAGTATATTAAAGGTAAAATTAATTGGGGTGTCATCAAAACCAGTCTGGAACACTCAAAAGACGTGAGTTCTTGCCCTGCCAATCATGGTGCTGAGGCATCTGCTTCAATTGATAGTGGTGATTCTCCCGCGGCTGCTGCAACCTTCGTTGTCAATAATGTTAAGTAGCAGTACCAACATTAAGTATGATCTTCATCAAGACAAAGGGTCGGCGATTAATGGAGTAATATTTATATATATCAAATAAATTACTCCTTATAACCTTTTGTTTATTGTGTGTGTTTGTGATTTTTCTTTTTTTACTTTCAACTCGCAATCGCAAGTGTGTTTATTTCTAAGTTGTAACCCCCTTTCTACAATTTATTTACTTATCTCTATTCTATAAGCCAGCTCCTGAGGGTATTGTAGTAAATTAACTTTTCGTGTCCACTTGACAAAACTCAATTCTACCCTCTCCCGTTTGCCAGTTAACTAACAATACAAATTTTCGTTTCCACTTGCAAATTACCCATTAATCACGCATAAATATTGATTTATATTAGGAAGCCCAGCTTATCTCACG ATGTCGTCAAGACCAGAGATCAGTGAGGAGCAGAGGGTGATTTTAGATAAGTTGAAGGCAGAGTTGCCGGAAGCTGTGATGCCTGTGACAGCCTCAGGCTTATTGGGCGATGATAAAAAGGGAAAATCAACCCAAGTGTATGTAAGAGCCAGTATGCTGAATAATGGCGTGGCAACGATGAATTATCGTGACCACAAACTTTGGTCTGGTTCCATTATTGGCAGCTACCCTGATGATATTGAAATGAATGGTGCGCGTTCGACTACTCACCAAGGTGTTCCACCAAAAGATACAGAGGGTTCCATGGGGGCGATAGTGTTTGTTGGCCCTAACGTACAAGATGGTGCAGATGATTGCGCATGGGTCTTGGCATGGAGCGTCCTTGGTGATGGCACCACTGAAAACAAGATTTACGTGGAAACTGGTCCTAGTTCCAAGTATATTAAAGGTAAAATTAATTGGGGTGTCATCAAAACCAGTCTGGAACACTCAAAAGACGTGAGTTCTTGCCCTGCCAATCATGGTGCTGAGGCATCTGCTTCAATTGATAGTGGTGATTCTCCCGCGGCTGCTGCAACCTTCGTTGTCAATAATGTTAAGTAG MSSRPEISEEQRVILDKLKAELPEAVMPVTASGLLGDDKKGKSTQVYVRASMLNNGVATMNYRDHKLWSGSIIGSYPDDIEMNGARSTTHQGVPPKDTEGSMGAIVFVGPNVQDGADDCAWVLAWSVLGDGTTENKIYVETGPSSKYIKGKINWGVIKTSLEHSKDVSSCPANHGAEASASIDSGDSPAAAATFVVNNVK Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo10692.1 vs. NCBI nr
Match: gi|902182743|gb|KNA09983.1| (hypothetical protein SOVF_148550 [Spinacia oleracea]) HSP 1 Score: 400.2 bits (1027), Expect = 2.100e-108 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1
BLAST of Spo10692.1 vs. NCBI nr
Match: gi|902230132|gb|KNA21726.1| (hypothetical protein SOVF_040710 [Spinacia oleracea]) HSP 1 Score: 163.3 bits (412), Expect = 4.300e-37 Identity = 94/198 (47.47%), Postives = 121/198 (61.11%), Query Frame = 1
BLAST of Spo10692.1 vs. NCBI nr
Match: gi|731319502|ref|XP_010670303.1| (PREDICTED: jasmonate-induced protein homolog [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 150.6 bits (379), Expect = 2.900e-33 Identity = 93/199 (46.73%), Postives = 128/199 (64.32%), Query Frame = 1
BLAST of Spo10692.1 vs. NCBI nr
Match: gi|870866319|gb|KMT17315.1| (hypothetical protein BVRB_2g040090 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 149.4 bits (376), Expect = 6.500e-33 Identity = 91/199 (45.73%), Postives = 127/199 (63.82%), Query Frame = 1
BLAST of Spo10692.1 vs. NCBI nr
Match: gi|731319363|ref|XP_010670216.1| (PREDICTED: jasmonate-induced protein homolog [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 149.1 bits (375), Expect = 8.500e-33 Identity = 82/160 (51.25%), Postives = 112/160 (70.00%), Query Frame = 1
BLAST of Spo10692.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTG2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_148550 PE=4 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 1.500e-108 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1
BLAST of Spo10692.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQC0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_040710 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 3.000e-37 Identity = 94/198 (47.47%), Postives = 121/198 (61.11%), Query Frame = 1
BLAST of Spo10692.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CZH0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g040070 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.000e-33 Identity = 93/199 (46.73%), Postives = 128/199 (64.32%), Query Frame = 1
BLAST of Spo10692.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CU80_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g040090 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 4.500e-33 Identity = 91/199 (45.73%), Postives = 127/199 (63.82%), Query Frame = 1
BLAST of Spo10692.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CD39_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g106460 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.300e-27 Identity = 79/204 (38.73%), Postives = 111/204 (54.41%), Query Frame = 1
BLAST of Spo10692.1 vs. ExPASy Swiss-Prot
Match: JIPH_ATRCA (Jasmonate-induced protein homolog OS=Atriplex canescens PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.800e-11 Identity = 40/115 (34.78%), Postives = 61/115 (53.04%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10692.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo10692.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo10692.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo10692.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
|