Spo10820.1 (mRNA)

Overview
NameSpo10820.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionThioredoxin superfamily protein
LocationSpoScf_00206 : 118191 .. 124250 (+)
Sequence length600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGATGGGATGTCGTCGGAAAAAGTATGTGGATGTCGTCGGAAGATGGCCTTGGAGTGGCCTCTCGGAAACGGAAAGTTGAAGGGAGGTGGGGTAAATTATGAAAGGAGGCGGGGTAACTTATATAAGGGTAGAACCATATTTTCACCATAAATACGCAGACGTTTTAAGCGTATGCGGACGTCGAATACTTTTAGAAAGTGGAAATATGATTTTGTTAAAAGTTTATACTATGTATTTCGTTTCATGTATCATGTTGACTTTAATGTAATCAAATATAATAGTGTAAAAAGTTATTACCGGTAGTTTCATACTACCTTTGTTTCAAAAGATTTTTACACTTATTATTTGCACAAATTCCAATGCAATATTTGACCGCTAATATATCTAATCATGTACGATAACAAATTATAAAAAGTTGATATTTACAAAATACATTTTGAGACGAATCTAACAAGATATCTCGTGATAATTTTTGGTAGATATACTAGTAAAACTTTATACGGAGTAGTCAAAGTTAGATTATTAAATTCATTTCTCAAAGCCTAAAGAATTTAATGAAACGGAGGCGGTACAACCTAAACCTAAATAGGTAGAAAATTGTGCGAAGTAGGTAGACTTAGGCAGGCGGTGCCGAGAAGGCGGAGATAGAGATTGGATAAAGATGTTAGTGACAACAAGGACAATCGGAGGAATGCAATGGTCTGTGTCGTCACTAAGCAAGAGGCGGTTGTTGAGTTGTTCATCTTCAGCAGCAGTGAAATCCAGAAAGCTGATTCTTTATTCAAAACCGGGCTGCTGTTTGTGTGATGGCCTCAAAGAAAAGCTATCCGCCGCCTTTTCTCTGTCTTCACCTACGGATCCCCTCCACGAAGTCGACTTGCAGGTGATTTTCATTTCATTTGTTCATTTATGGCTTTCTCGTTCTATCACTTGCGTATTCTTCAATTGAATTGAATTGAATTGTAATCGAAATTGAATTGAATTGAACTTAATTTAATTCTACTTTTAATAGATAAGAGATATCACGACAAATCCAGATTGGGAGAGGGCTTACCAGTACGAGATTCCTGTTTTGGCTAAATTACTTACAGATGGTACCGAGGTCTGTTTTCTTTTTCAAGCTGCAATTTTATTAAACCCTAACTTTGACGAATTCACACCTAAATCCTGTGGAATTACTTTCAACTAATGACAATGATGTTACAAACTTGAATTTGCCTCCATTTTTCACTAAGAATTTGTTTAATTAAGTAATGCGATGTTCTGATTTCTGAGTAATGAGTTATCATGTTATATCAATCTTTAGTCTTTCTCTTTCCCTGTCTCCAGCATCACAATTTACTACCCCAACAGGCTCTTCCACCTTCCCCCTTGGTTCATTCCTTCCTTTAGCAGGCTGTCTTCACACTTCCTTTTTCAATTTCTGCACTTACCTAACTATCTCCATGGGATGTTCCACATCCCCCTCCTACTTCTTCTTATGTGCTCTCCTAGTAGCTGAAGTTGACATTACTTGCTTCCCTAGGCTTTGATTATTTGGTAAAAAACACTTGAGCTTCAGCATTTGAGAATCCTCGTTGCAATCTTGTACAACTCGAGCAGTTGGCACTATTTTACGAGTAGCTCATGGAGTGTGGTCCCTTCTGGACTTCGATTCTGACATAGGCATTCTAAAAAAATTCACGCCTTTATCTAAGATAATTTCATTCTTACCCCAAAGGAAACTGTAATAACAGGGTGCTGGTGGGCATTTTTTTTGGTTTAAGTAAGCTTAAGATGTATTGTAACCCCAAATACCAGATTTACAGCCTAATCATCTCAAATGGGAAAAACACCTAGTAAGCACTACAAGCACACCAATCAGACAACTACTTACAATATATTTATCTCTATTGCTATCTTTTGCGTCATGAGACTATGAATTCTATACACGTATCATCTATAATTTTCTTTACAGTTGTATCTTCACTTGGAACTTTAAAATTCTGAACAACATCATCTATTGCATTACAGATGTGATAAACAATAACTTAAAAACTTGTACTGCGTACCCCTCTTCTAAACTTATTTCCATTGTGCTTGTTCTTGATCTATCTAAAGATGCCATTGGATAGCAGTTAAAAAAAAAAGAGGTGTTTGAGGGTTTCAGGGCTGCCACCACGTATCATGCGTAAATTGTGAGACGTTCTTGTAAAGTAGTTCTTTTAGTAGTAGCCTAAACTGAAAAGCGGACCATGCTATGTGCTTATGCTTTGGGATAGCCAATCTTTGCCAAACCACCTTGTCCCAACCACTGTATAAAAAGGTGCGCCCGAGGCGCAAGGCGTTTGGTGCCAGCGCCTTTTGTAGTCTAGGTGAGACGATTTTGATAAGGCGCACAAAGGCGCACAAAGGTGTTTTCCGGTGAACACCAGTCCATTCTCCTTCTTCTTTGTCGTTCTCTTGCTCTGCTTTTTCCCTGAACTTTGAGCAAACCAGATTGAGTGTCCATAATTTTTGCAATAAATGCAGAAAAAATGACATTTTGGGCTAATACTGCTGCTTAGTTTTGCCCATCCACACAAATTCCGGGAATTTTTCTCCCATTTTCACTTGAACTAGCATCCTTGCATATATGACTCTGTCTCGTGATTGAGTTCTTATATATCAAGGTTTACTAGTTTACCAAGATTGTTACCAGCTGTTTCCAGAGTTGAATGGTCATGTAGTTCGATGGGAAGCTCTGGCAGCGTGAGCCAGATTGTTGCCGTGTCTATCTGGTCTTCCGATGGTTTGTGCAGGTGGAGTGGAAATCCGTCTACGAGCCATGGACCTTGACTGTAGGCTGAAGTCATTAGGATTGGCAAAGGTTATAAAAAAATACCCCTTACCCAGGAGTAGTAGTTCCCATGAACCCACATTCTTAAAGGTTCTCTTGGTCTTTTAGGAAGTGGAAGGAGAAGGATATCCCAACAACTTTCCCTATGAGTGATGCTCTTCATGGCTGACAAAGCTTTTTGCACTCTTCTTCATCAAGGGGGGATGAACAAATCCTTTGGTTGTGCTTCGATAAGGGGGGTGAGACGAAAGGAAGGTTATAGGATTGATGACCTTGATTTGTTTCTGTTTTTGGGATTGAAGAGGCTTTGAGACTCGAGTTTGCGGCGACGTTGACCGAGAAGATTTCCCTGGTTGGCGTCGTGGTGACTTAGGTAGAGATGTTTCTACTTTGCGGTCAGAAGAGGTAAGAGTCCTTCATATGCCAAAAACTCCCATGCCTTTCTTGGTAGGAAAATAAAACCAGCTGGCGATTCAATTTCCTACATGTTATGCGAACATGCACCTTAAGTCCCTTTTGCCGAGGCATAAAGCAAATAATAGAAAACCAATAAATGTACAAATTAAACGCTACCTAAGTTTTAAGATTAAATATTCCAGCATAATCCTCAATTTTATTTATTTGTATTTTTTTTTATAGTTGCATGACCGTCAATTAATTGCATGTAATGGCTCTAATTTCAACCATAGATCAAAACCCCAATTTAGAGACGAACTTCAGCTAGTAATTTAATCGATTCCTTTATTTTCATATAGGGTTTAGGGTTTATTTTCCTATATATATAGTGTCCTTTGTTCTTGATCTATACCACAATTAGGGTCATATTTGTAAGATAATGAGGAAATTGTGTTAAAAATTTGTCCTTAATAGTGTTCTCTAATCGAGTTTTAATTTGAATACGACTTGTGTGTTTCTCTTACAACTCATTAGGGACTTCTATTAATGACCTTATTCAGGAAATTCATACATCAATACCACATACAAGTATACAACGTTCATTGACTCGACCTCTAGAAGTTCTTCACGAGGAAGGGACCTTGTGCCGTTGTGCGCCTACTCACACTCTTCCCATAATCCCATTACTAGTCTTAGTTTTCTTGTCCTTAGCATCAATTGGACCTTCATTTAGAAGATATTTGGTGTGCAACCTATGTAATCCTCTCCCTCCTAGTTTCGTACTACTCTTAGGCCTTGTTCTCTTCAACTTGTAGAACTTTATTTAAATAAGTTTCAGGTCCTATAAATTCAGATAAGTTTCTATAAGTTAAATGGTCCGAGTGTTTTGACACCGGATCGTGCGGCGCGCTCTTGCCCATGGGGCGGCAAGGGCGCAAGCCTGGTGCGGAAAGTGAATCTCAAGGCTCGGGGCACGAGCGAGTGTTTGCTTCAGAATGGGCACTCTTGCCTATTGACGACAAGAGCGAGGGTCGAGGGTCGAACGGGACGCTTGTGTGCACAGCAGGCACCAGCGGGACCGTCGACGAGAATGTATCTGCTTTGAGGGGGATTTTGTTGGGTCTTAGAAAACTTAAAAACATGCGACAACACAATATCTATAAAGGCTAGCAACAACGCAAGTAATTAAGCAAAGACAACTTCTGGTGAGGGGTATTGGTTAAGATCTTATAAGTTAAATAAGGTCCTATAAGATCTTATAAGTTAAATAAGTTCCTATAAGTTCCAATAATTAATAAAATATGTAATATTATGATTATTTGCGTTGTTATATTAAATAAATCATATTTATATTTATATAATTATATTAAAATAATTTGTGGTTACTAGTTGACGATAATAATTATCAATGACACGTAATTATTAATTAATATGTTATTATTAATTACTATCAATATAATTATACGGGATAAAATTAATACACACTTTTAAAATTATGTGTACATCACAAATCAATGGACGAGTTTTTTGGTGAGGCGCAAATAATCACAATGTTACTCCTTACATCAAAGCATCAATTGAAAGTAATAACTTCCGACTTACATTTTTTCAGCGGGACATGTGACTTGTGAGATACTCGTAGGGAGTATCAAATAGTTGTTTTCCGTACGTGATAAAGTTCCATTACGGAATATAAATATTTTACAAACTGGTCGAATTTGTATTTGGATTTTATAAATTTTGAATAATTATGAAGGAGTAATAATTTATATTATAAATAATAACACAAAAGACATAAATTATTAATATAAGAACTAAATAATAATTACTTTATTAATTTATTAGTGTTTGCAATCAACTATTATCAATATTCTAATGGCTAAAAGTTTAGTAATAATCTAATAAACTTTAAATAAAGTCTTATAAGGTTCAATAAGGTCTAATAGGGTTCAGTAAGATCTTATAAGGTTCTATGAGGTCTAATAAGGTCCAATGAGATTCTATAAGGTCATATAAGTTAAGTCCAGTTCAGATAAGTTGAGTTCAGCTAAGTTCAGATAATTTCAGGTTGTATAAGTTGAAGAGAACACACCCTTTCTCTTATACACACTTAATTTTGTTAATTGTTATCATCACCTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTCTTCATAGCTTCTTACCTCCTTAGATGACTTTCATTTCAACCGTAGAATTGGTGGATTTTATTTTTACCTTTCACCTTCGGCTCTTCCGTTCTGTTGCCACTAATGAATTGACCTTTATTTCAACTTATCATCTATTCGGCTGGAGATCTTGGAAATCCTATAAATTTAAAAACTCTTGTATATTATTAGATTTGGTAGTTTGGAAAAGGAAAGCACTAATTGTTATTCCCTGAAAATCAGTAATGTGAAAATAGATGGATAACCACCTAAAATTTGGTTTATATTGCTCTTGGTTCTTTTGTAAGGTTTGTACTTTGTACCCCCAATAACATCTTTGACATTCTTTTTAAGGAGGAATCCCCTTTCTTCTTCTTCCGAGGCCTGTATCGTAGTATAGTACAAACAAATTTTCCTTCACATTAACATTAACATGTGTGTGATCGACTTCTAATAGTTCTGTTTCTTATGCAGGAAACACTACCTAGATTATCTCCCCGCCTCGGTGTTGAGGTCATTCGACAGAAATTAGTTGATGCTTTCAGATTGTAACAATGTTTAGGATGCTTGGCATTCGGAAGCTATAAAAAATACGAAGTATCATTTACTTCTGATTTTAACAAGTATCTTTTTGTTTACCTCAACTTGCATGCTATTATCCCGTTTGAATAG

mRNA sequence

ATGGTGGATGGGATGTCGTCGGAAAAAGTATGTGGATGTCGTCGGAAGATGGCCTTGGAGTGGCCTCTCGGAAACGGAAAGTTGAAGGGAGGTGGGGTAGACTTAGGCAGGCGGTGCCGAGAAGGCGGAGATAGAGATTGGATAAAGATGTTAGTGACAACAAGGACAATCGGAGGAATGCAATGGTCTGTGTCGTCACTAAGCAAGAGGCGGTTGTTGAGTTGTTCATCTTCAGCAGCAGTGAAATCCAGAAAGCTGATTCTTTATTCAAAACCGGGCTGCTGTTTGTGTGATGGCCTCAAAGAAAAGCTATCCGCCGCCTTTTCTCTGTCTTCACCTACGGATCCCCTCCACGAAGTCGACTTGCAGATAAGAGATATCACGACAAATCCAGATTGGGAGAGGGCTTACCAGTACGAGATTCCTGTTTTGGCTAAATTACTTACAGATGGTACCGAGGAAACACTACCTAGATTATCTCCCCGCCTCGGATGCTTGGCATTCGGAAGCTATAAAAAATACGAAGTATCATTTACTTCTGATTTTAACAAGTATCTTTTTGTTTACCTCAACTTGCATGCTATTATCCCGTTTGAATAG

Coding sequence (CDS)

ATGGTGGATGGGATGTCGTCGGAAAAAGTATGTGGATGTCGTCGGAAGATGGCCTTGGAGTGGCCTCTCGGAAACGGAAAGTTGAAGGGAGGTGGGGTAGACTTAGGCAGGCGGTGCCGAGAAGGCGGAGATAGAGATTGGATAAAGATGTTAGTGACAACAAGGACAATCGGAGGAATGCAATGGTCTGTGTCGTCACTAAGCAAGAGGCGGTTGTTGAGTTGTTCATCTTCAGCAGCAGTGAAATCCAGAAAGCTGATTCTTTATTCAAAACCGGGCTGCTGTTTGTGTGATGGCCTCAAAGAAAAGCTATCCGCCGCCTTTTCTCTGTCTTCACCTACGGATCCCCTCCACGAAGTCGACTTGCAGATAAGAGATATCACGACAAATCCAGATTGGGAGAGGGCTTACCAGTACGAGATTCCTGTTTTGGCTAAATTACTTACAGATGGTACCGAGGAAACACTACCTAGATTATCTCCCCGCCTCGGATGCTTGGCATTCGGAAGCTATAAAAAATACGAAGTATCATTTACTTCTGATTTTAACAAGTATCTTTTTGTTTACCTCAACTTGCATGCTATTATCCCGTTTGAATAG

Protein sequence

MVDGMSSEKVCGCRRKMALEWPLGNGKLKGGGVDLGRRCREGGDRDWIKMLVTTRTIGGMQWSVSSLSKRRLLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFSLSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRLGCLAFGSYKKYEVSFTSDFNKYLFVYLNLHAIIPFE
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo10820Spo10820gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo10820.1Spo10820.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo10820.1.exon.1Spo10820.1.exon.1exon
Spo10820.1.exon.2Spo10820.1.exon.2exon
Spo10820.1.exon.3Spo10820.1.exon.3exon
Spo10820.1.exon.4Spo10820.1.exon.4exon
Spo10820.1.exon.5Spo10820.1.exon.5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo10820.1.CDS.1Spo10820.1.CDS.1CDS
Spo10820.1.CDS.2Spo10820.1.CDS.2CDS
Spo10820.1.CDS.3Spo10820.1.CDS.3CDS
Spo10820.1.CDS.4Spo10820.1.CDS.4CDS
Spo10820.1.CDS.5Spo10820.1.CDS.5CDS


Homology
[Close]
BLAST of Spo10820.1 vs. NCBI nr
Match: gi|902234865|gb|KNA23619.1| (hypothetical protein SOVF_023350 [Spinacia oleracea])

HSP 1 Score: 231.5 bits (589), Expect = 1.300e-57
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1 

		  

Query: 50  MLVTTRTIGGMQWSVSSLSKRRLLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFS 109
           MLVTTRTIGGMQWSVSSLSKRRLLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFS
Sbjct: 1   MLVTTRTIGGMQWSVSSLSKRRLLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFS 60

Query: 110 LSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRLG 165
           LSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRLG
Sbjct: 61  LSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRLG 115
[Close]
BLAST of Spo10820.1 vs. NCBI nr
Match: gi|731346087|ref|XP_010684269.1| (PREDICTED: uncharacterized protein LOC104898854 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 157.5 bits (397), Expect = 2.400e-35
Identity = 82/119 (68.91%), Postives = 95/119 (79.83%), Query Frame = 1 

		  

Query: 51  LVTTRTIGGMQWSVSSLSKRRL------LSCSSSAAVKSRKLILYSKPGCCLCDGLKEKL 110
           ++TTRTI GM WSV SLS RR+      +  SSS+AV ++ LILYSKPGCCLCDGLKEKL
Sbjct: 3   IMTTRTIVGMPWSVLSLSNRRISTPPKFIRASSSSAVPNKNLILYSKPGCCLCDGLKEKL 62

Query: 111 SAAFSLSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRL 164
            AAFS+S       +++LQIRDITTNP+WE+AYQYEIPVLAKL  DGTEETLPRLSPRL
Sbjct: 63  LAAFSIS-------DLNLQIRDITTNPEWEKAYQYEIPVLAKLCADGTEETLPRLSPRL 114
[Close]
BLAST of Spo10820.1 vs. NCBI nr
Match: gi|1009172094|ref|XP_015867085.1| (PREDICTED: uncharacterized protein LOC107404627 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 155.2 bits (391), Expect = 1.200e-34
Identity = 75/89 (84.27%), Postives = 83/89 (93.26%), Query Frame = 1 

		  

Query: 76  SSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFSLSSPTDPLHEVDLQIRDITTNPDWER 135
           SSS+A+ SRKL+LYSKPGCCLCDGLKEKL AAF LS P D LH+VDLQIRDIT+NP+WER
Sbjct: 36  SSSSALPSRKLVLYSKPGCCLCDGLKEKLQAAFLLSGP-DSLHDVDLQIRDITSNPEWER 95

Query: 136 AYQYEIPVLAKLLTDGTEETLPRLSPRLG 165
           AYQYEIPVLAK+L+DGTEETLPRLSPRLG
Sbjct: 96  AYQYEIPVLAKVLSDGTEETLPRLSPRLG 123
[Close]
BLAST of Spo10820.1 vs. NCBI nr
Match: gi|224066847|ref|XP_002302244.1| (hypothetical protein POPTR_0002s08570g [Populus trichocarpa])

HSP 1 Score: 152.5 bits (384), Expect = 7.600e-34
Identity = 73/93 (78.49%), Postives = 82/93 (88.17%), Query Frame = 1 

		  

Query: 72  LLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFSLSSPTDPLHEVDLQIRDITTNP 131
           L  CSSS++   RKLILYSKPGCCLCDGLKEKL AAF LS P   LH+VDLQ+RDIT+NP
Sbjct: 31  LAFCSSSSSASRRKLILYSKPGCCLCDGLKEKLQAAFLLSGPHS-LHDVDLQVRDITSNP 90

Query: 132 DWERAYQYEIPVLAKLLTDGTEETLPRLSPRLG 165
           +WERAYQYEIPVLAK+L+DGTEETLPR+SPRLG
Sbjct: 91  EWERAYQYEIPVLAKVLSDGTEETLPRISPRLG 122
[Close]
BLAST of Spo10820.1 vs. NCBI nr
Match: gi|567883207|ref|XP_006434162.1| (hypothetical protein CICLE_v10002717mg [Citrus clementina])

HSP 1 Score: 149.4 bits (376), Expect = 6.500e-33
Identity = 76/126 (60.32%), Postives = 94/126 (74.60%), Query Frame = 1 

		  

Query: 48  IKMLVTTRTIGGMQWSVSSLSKRR---------LLSCSSSAAVKSRKLILYSKPGCCLCD 107
           I    T  T+     S++ +S+RR           S SSS++  +RKL+LYSKPGCCLCD
Sbjct: 27  IMAAATVATVVARPLSLTLVSRRRSRWGFSPLAYSSSSSSSSSSTRKLVLYSKPGCCLCD 86

Query: 108 GLKEKLSAAFSLSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPR 165
           GLKEKL AAF LS P D LH+VDLQ+RDITTNP+WE++YQYEIPVLA++L+DGTEE LPR
Sbjct: 87  GLKEKLQAAFLLSGP-DSLHDVDLQVRDITTNPEWEKSYQYEIPVLARVLSDGTEEALPR 146
[Close]
BLAST of Spo10820.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RXI3_SPIOL (Glutaredoxin-like protein OS=Spinacia oleracea GN=SOVF_023350 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.000e-58
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1 

		  

Query: 50  MLVTTRTIGGMQWSVSSLSKRRLLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFS 109
           MLVTTRTIGGMQWSVSSLSKRRLLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFS
Sbjct: 1   MLVTTRTIGGMQWSVSSLSKRRLLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFS 60

Query: 110 LSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRLG 165
           LSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRLG
Sbjct: 61  LSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRLG 115
[Close]
BLAST of Spo10820.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ESK5_BETVU (Glutaredoxin-like protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g163160 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.700e-35
Identity = 82/119 (68.91%), Postives = 95/119 (79.83%), Query Frame = 1 

		  

Query: 51  LVTTRTIGGMQWSVSSLSKRRL------LSCSSSAAVKSRKLILYSKPGCCLCDGLKEKL 110
           ++TTRTI GM WSV SLS RR+      +  SSS+AV ++ LILYSKPGCCLCDGLKEKL
Sbjct: 3   IMTTRTIVGMPWSVLSLSNRRISTPPKFIRASSSSAVPNKNLILYSKPGCCLCDGLKEKL 62

Query: 111 SAAFSLSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPRLSPRL 164
            AAFS+S       +++LQIRDITTNP+WE+AYQYEIPVLAKL  DGTEETLPRLSPRL
Sbjct: 63  LAAFSIS-------DLNLQIRDITTNPEWEKAYQYEIPVLAKLCADGTEETLPRLSPRL 114
[Close]
BLAST of Spo10820.1 vs. UniProtKB/TrEMBL
Match: B9GU56_POPTR (Glutaredoxin-like protein OS=Populus trichocarpa GN=POPTR_0002s08570g PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.300e-34
Identity = 73/93 (78.49%), Postives = 82/93 (88.17%), Query Frame = 1 

		  

Query: 72  LLSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFSLSSPTDPLHEVDLQIRDITTNP 131
           L  CSSS++   RKLILYSKPGCCLCDGLKEKL AAF LS P   LH+VDLQ+RDIT+NP
Sbjct: 31  LAFCSSSSSASRRKLILYSKPGCCLCDGLKEKLQAAFLLSGPHS-LHDVDLQVRDITSNP 90

Query: 132 DWERAYQYEIPVLAKLLTDGTEETLPRLSPRLG 165
           +WERAYQYEIPVLAK+L+DGTEETLPR+SPRLG
Sbjct: 91  EWERAYQYEIPVLAKVLSDGTEETLPRISPRLG 122
[Close]
BLAST of Spo10820.1 vs. UniProtKB/TrEMBL
Match: A0A067GZI3_CITSI (Glutaredoxin-like protein OS=Citrus sinensis GN=CISIN_1g030511mg PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.500e-33
Identity = 76/126 (60.32%), Postives = 94/126 (74.60%), Query Frame = 1 

		  

Query: 48  IKMLVTTRTIGGMQWSVSSLSKRR---------LLSCSSSAAVKSRKLILYSKPGCCLCD 107
           I    T  T+     S++ +S+RR           S SSS++  +RKL+LYSKPGCCLCD
Sbjct: 3   IMAAATVATVVARPLSLTLVSRRRSRWGFSPLAYSSSSSSSSSSTRKLVLYSKPGCCLCD 62

Query: 108 GLKEKLSAAFSLSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPR 165
           GLKEKL AAF LS P D LH+VDLQ+RDITTNP+WE++YQYEIPVLA++L+DGTEE LPR
Sbjct: 63  GLKEKLQAAFLLSGP-DSLHDVDLQVRDITTNPEWEKSYQYEIPVLARVLSDGTEEALPR 122
[Close]
BLAST of Spo10820.1 vs. UniProtKB/TrEMBL
Match: V4V5W6_9ROSI (Glutaredoxin-like protein OS=Citrus clementina GN=CICLE_v10002717mg PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.500e-33
Identity = 76/126 (60.32%), Postives = 94/126 (74.60%), Query Frame = 1 

		  

Query: 48  IKMLVTTRTIGGMQWSVSSLSKRR---------LLSCSSSAAVKSRKLILYSKPGCCLCD 107
           I    T  T+     S++ +S+RR           S SSS++  +RKL+LYSKPGCCLCD
Sbjct: 27  IMAAATVATVVARPLSLTLVSRRRSRWGFSPLAYSSSSSSSSSSTRKLVLYSKPGCCLCD 86

Query: 108 GLKEKLSAAFSLSSPTDPLHEVDLQIRDITTNPDWERAYQYEIPVLAKLLTDGTEETLPR 165
           GLKEKL AAF LS P D LH+VDLQ+RDITTNP+WE++YQYEIPVLA++L+DGTEE LPR
Sbjct: 87  GLKEKLQAAFLLSGP-DSLHDVDLQVRDITTNPEWEKSYQYEIPVLARVLSDGTEEALPR 146
[Close]
BLAST of Spo10820.1 vs. TAIR (Arabidopsis)
Match: AT4G08280.1 (Thioredoxin superfamily protein)

HSP 1 Score: 140.6 bits (353), Expect = 1.100e-33
Identity = 68/91 (74.73%), Postives = 78/91 (85.71%), Query Frame = 1 

		  

Query: 73  LSCSSSAAVKSRKLILYSKPGCCLCDGLKEKLSAAFSLSSPTDPLHEVDLQIRDITTNPD 132
           LS SSS+   +RKL+LYSKPGCCLCDGLKEKL AAF+LS+  D L++V LQ+RDITTNP+
Sbjct: 22  LSSSSSSKPNTRKLVLYSKPGCCLCDGLKEKLHAAFTLSTGPDSLNDVTLQVRDITTNPE 81

Query: 133 WERAYQYEIPVLAKLLTDGTEETLPRLSPRL 164
           WERAYQYEIPVLAK  +DG EE LPRLSPRL
Sbjct: 82  WERAYQYEIPVLAKENSDGKEEVLPRLSPRL 112
The following BLAST results are available for this feature:
BLAST of Spo10820.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902234865|gb|KNA23619.1|1.3e-57100.hypothetical protein SOVF_0233... [more]
gi|731346087|ref|XP_010684269.1|2.4e-3568.9PREDICTED: uncharacterized pro... [more]
gi|1009172094|ref|XP_015867085.1|1.2e-3484.2PREDICTED: uncharacterized pro... [more]
gi|224066847|ref|XP_002302244.1|7.6e-3478.4hypothetical protein POPTR_000... [more]
gi|567883207|ref|XP_006434162.1|6.5e-3360.3hypothetical protein CICLE_v10... [more]
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BLAST of Spo10820.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RXI3_SPIOL9.0e-58100.Glutaredoxin-like protein OS=S... [more]
A0A0J8ESK5_BETVU1.7e-3568.9Glutaredoxin-like protein OS=B... [more]
B9GU56_POPTR5.3e-3478.4Glutaredoxin-like protein OS=P... [more]
A0A067GZI3_CITSI4.5e-3360.3Glutaredoxin-like protein OS=C... [more]
V4V5W6_9ROSI4.5e-3360.3Glutaredoxin-like protein OS=C... [more]
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BLAST of Spo10820.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo10820.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G08280.11.1e-3374.7Thioredoxin superfamily protei... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008554Glutaredoxin-likePFAMPF05768DUF836coord: 85..163
score: 4.7
IPR012336Thioredoxin-like foldGENE3D3.40.30.10coord: 85..159
score: 1.5
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 80..155
score: 1.6
NoneNo IPR availablePANTHERPTHR33558FAMILY NOT NAMEDcoord: 70..164
score: 3.0
NoneNo IPR availablePANTHERPTHR33558:SF1GLUTAREDOXIN-LIKE PROTEIN C5ORF63coord: 70..164
score: 3.0

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010207 photosystem II assembly