Spo10841.1 (mRNA)

Overview
NameSpo10841.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionPhosphoglucan phosphatase LSF1
LocationSpoScf_00206 : 631893 .. 640168 (+)
Sequence length1369
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTGTGCAAAGAAATTGTTCATTACCAAGAAGAAGAAGGAAGTGGAGAAAGGGGAGGTGGAGTGTGTAAACGAGATGATGAAAAAGCTAGAAACTGTGTCCCTATGTGTTGAAGAGGAGGTCCAAGGGGAGGGAGTGAAACAAATAGCAACACATGCTGGCCAGACTAGGGGATCGGATGGGGAGAGCAAGGAAACTAGAGTGACGAAACAAGGGTTGCTCCCTGGGAGCGAGGTAGGGCAAGACACGAAAAAGGTGGGTGGGAATGGTACTGATGAGGTGGGGAAAGTGACAGAGGTAACGGGAGACAATGTAGTGAGGCAGGTGGAACCAACGGGAGCTTCGCTCCTACCNTGACAGAGGTAACGGGAGACAATGTAGTGAGGCAGGTGGAACCAACGGGAGCTTCGCTCCTACCCCCATTGAACTTTTCAGTGGGATGCTCATCATCAACTACTGGACGTAAGTACAGGAAATTTAGGCGTGAAGGAGGGGAAATAGGGTCGCAGGGGGTGGATGGAGAGGCAGTGTTCATGGGGGGGAAGCGCAAAGATTGTATGGAGATCGATGAAGAGGAGGATGGTTTGAAGGGAACAAAACAGGCGGACCGTAAGGGGTGTGTCAAAGTAGCGGTGGTTGGTCTTCACCAACCCCGCGAATACCAATGAAAATATTAAGCTGGAACTGCCAGGGGCTTGGCAACCCCCGGACAGTAACAGCCCTCCGAGACAGGTGTTGGAGGGATAGGCCAGAAATTTTCTTCTTGATGGAGACGATGATCGATGCGCAGAAGTTGGAGAGAATAAAGGTGCGGTGTGGGTATACAAATGGGGTGTGTATGAGCAGTGACGGGAGGTCGGGGGGTATGGCATTCTGGTGGAGAGATATCAATGTGAGGGTCGCGTCGTATTCGGACCATCATGTTGATGCGGAGATTCTTGATCACAACGGCAATGTGGCATGGAAAGCGGCGGGGGTGTACGGGTGGCCAGAGAGGGAGAGGAAACACTTAACGTGGGAAATGATGGGGAACTTATGGGGTGAGTGTATGAGTCCGTTGGTTTTATTTGGGGATTTTAATGAAATTGCAGGGCCATCGGAAAAGGAGGGAGGGGTGAGTAGAGGGGAGAGACAAATGGACGCGTTTAGGGCTGCTATGGATCAATGTAGGGTGCGGGATTTGGGCTATAGAGGAAGCATTTTTACGTGGCAAAGGGGATTATCTACAACTACTGTTGTACGGGAACGCCTCGACAGGTTCCTGGCTAACGTTGCATGGTCCACCCTTTTCCCCAACGCGGCTGTAATTCACTTGCCTCGTTACCGTTCCGATCATACCCCATTACTTCTGAAATCCGATTACTTGGGTGGTAGACATCAGGTCGAAAGGTTGTTCAAATTCGAGGCCCTTTGGCTCTCGAAGGAAGAATGTGGTGATGTAGTAGCAGCCTCATGGCACGAACAAGCAGGGGGGTCAGTGACGGAGAGGATAGAAAATTGCTCTCAAGCTTTGTCTGCGTGGGCTGCGGGTACCATTGGTAGTATTAAAAAGAAGATCAGGGAGGTGGAAAAGGAGCTCAAGGAGCTGCAAAACAGGTCACCTGATGCTACGGTGATCGAGAGGAGTACGGAGATTTGTGGTAGGTTGGACGAGTTGCATATGCTTGAGGAGTCTTACTGGCATGCTCGAGCTAGAACTAACGAGCTTCGTGATGGTGATAAAAACACAAAATATTTTCATCACAAAGCGAGTCAGCGGAGGAGGAGGAACTATATTGCGGGCTTGAATGATGAGCTAGGGGTGTGGACAACGGAAAAGGTAGAGGTACAGAAAATCGTTGCTCGATACTTTGATGGTTTATTTGCGGCAGAACCTTCAAATGGAGGTGAGGAGGCGTTAGCGGGCCTCGAACCGGTTGTCAATGGGGAGATGAATGCACGGCTAGATGCGGAGCCAACTGTGGAAGAGGTTCGTGAGGCTCTATTTCAAATGCACCCGAACAAAGCTCCGGGACCAGATGGTATGCATGCCTTGTTCTTTCAAAAATTCCGGAATATAATTGGGTCTGATGTTGTGAACTTTGTGAAAGGGTGGTGGAGGGGTAACGTAGACTTGTGGCCGATTAATAAAACATGCATTGTCCTCATTCCCAAGTGCAATGATCCAAAATTGATGAGCGAGTTTCGTAGATTAGCTTATGTAACGTTCTTTATAAGATCATTTCAAAGACAATGGCTAATAAATTAAAACCTTTTTTGGATTCGATTATCTCTATTAATCAAAGCACTTTTGTTCCGAAGCGACTTATTACAGATAATGCGTTGGTGGCTTTTGAGATCTTCCATGCAATGAAAAGAAGGGGGGAGGGGAAGGATGGGACGATTGCTCTCAAACTTGATATGAGCAAGGCATACGATAGAGTGGAATGGAGTTTCCTGGAAAGGGTTATGTTTCGTATGGGCTTTAGCGACAACTGGGTAAGGCGAATTATGGATTGTCTTTCAAGTGTTTCCTTCTCTTTCAAGATCAACGGGCAAATATCCGGGTCCGTGTATCCGACAAGAGGGTTGCGCCAAGGTGATCCTATCTCTCCATATTTGTTTCTCTTATGTGCTGACGCCTTTTCTACCTTGTTATCTAAGGCTGCTAGAGAAAATAGCATTCACGGGGCACGCATCTGTCGTGGCGCTCCTAGAGTGTCGCATTTGTTCTTCGCAGATGACAGTATTCTATTTGCCAGAGCCAATTTGCTAGAATGCNGTTCTTCGCAGATGACAGTATTCTATTTGCCAGAGCCAATTTGCTAGAATGCTCTAAGATTGCTTAGATCATCAGTACTTATGAAAGAGCTTCGGGTCAGAAAGTTAATTTAAGCAAAACGGATGTGGTATTTAGCAAGCGGGTGGGCTTTGAGAGAAGGTAGGCTATTGTGGAGACCTTGGGAGTACGAGAGGTGGTGAGGCATGAGAAGTACTTGGGCTTACCGACAATCATAGGCAAATCCAAAAAGGTGGTTTTTGCGGGCTTAAAGGAGAGGTTGTGGAAGAAGTTGAATGGATGGAAGGAAAAGCTCTTGTCCCGTCCTGGCAAAGAAGTATTGATCAAAGCAGTTGCTCAAGCCATTCCCACTTATATGANTGATCAAAGCAGTTGCTCAAGCCATTCCCACTTATATGATGAGTGTATTTAAAATCCCGGATGGTTTGTTGGATGAGATGCAAGCACTTATTGCCCGGTTTTGGTGGGGTTCGTCGGATACGGGTAGAAAGATGCATTGGCACAATTGGGAATCGATGTGTCTACCAAAGTCAATGGGCGGCCTAGGCTTTCGCGATCTTAAATGCTTCAATCAAGCTATGCTAGCAAAACAGGCGTGGCGACTTCTAAATGATACCAATTCACTGCTTCACTCGGTCCTAAAGGCACGGTATTTTAAAAACGGTGACTTCATTGATGCAAGAAGGGGGTACGATCCGAGCTATACATGGAGAAGTATATGGGGCTCAAAATCGCTGCTGCTCGATGGCCTTAAGTGGAGGGTTGGGAACGGACTAGACATTGGTGTGTGGGAAGAGGCGTGGTTACCCGGCGAGGGCACAAGTTTGGTTCCAACGCTAAACCTGAATTTTGACAGTGAGCTAAGGGTGAGTGATCTTATTGATACGAATGTGGGGGCCTGGAATGAAGAGACAGTAAGGGAGATTTTTAATGAGGAAGAGGCTGCACTAATCCTTGATATCCCCGTATCCGAGTATATGCCGTCCGACCAACGTTACTGGTGGCCTTGCAAAGATGGGGTGTATTCTGTGAGAAGTGGGTACTGGTTGGCGAGGCTCGGGAAGACTCGAGCGTGGGCTACCTTATACGGTCCAAGGGAGGAAAGATTATGGCGATGTATGTGGAAACTTACGGGACCTCCAAAACTCCGACACTTTATATGGAGAGCTTGCAAAGGCAGCCTTGCGGTGAAGGAGCGGCTACATTATCGGCATGTGGTGGATAATAGTAATTGTCAGGTATGTAACTGCTCTAGTGAAACAATCTTCCATTCTTTGTTTGAATGTACGGCTGCCCGTGTAATCTGGTCACAAAGTCAGTTCGCGGACTTAATAGCGGAGGCCCCCTCTACTTCTTTCCCCACGATGTTCGAATGGGTAGCAAGCAGGTTGAACGGAGACGAGTTGAGATGGTTTTGCACAATAGCGTGGGCTGCGTGGTTTTGTAGGAATGATAAGCTGAATAACAATGGCGTGGCTAACCCCATCCAAATAGCTGCGAACTTTGCAAAGTTGGTGTCAGACTACGTCGAGTACGCACAGTTGGTCTTCACACCAGCTCCTGGTGCAGCTAGAGGTAGCGCGTTAGGGTGGAATACACCTATGGAGGGGCACATCAAAATCAACTCTGACGCCCACATCGCGGGCGGTTCTGGTGTAGGATTGGGTGTGGTTCTGCGGGATTCGGAGGGGCAGATTGTGGCTGCAGGTGTGAGAAAGTTGGATGCTAGATGGGGTGTGGAACAAACCGAGGTGGCTGCGGCGAAATACGGTTTACAGCTTGCTCACAGGTTGGGTTTCCCAAGGGTGGTGCTGGAGTGTGATTCAATGAATGTTGTGCGTGCTATCAACGATAGAGCTGCTGGCTTCTCCCCTCTTATGCTGTTTTATGAAGATATTGCTAAATTGAAAACCTCCTTTGAGTCTTTTAGCTGTAATCATGTTAGTAGAAAGTGTAATACGGTGGCTCATCTCATGGCAAGATGGAGTACCAATGTCCGAGAGCTTGTTTTTGAGGACAATTTCCCCCAAAGTCTCACCACTTTGGCGGGACTTGATTTAATATAATATATGTCGGCCTAACGTTTCTATCAAAAAAAAAAACATAATATTGGAAACTTTAAATACTTATTGTATTACAAGGATAATATGAATTTTTCCCTAAACAAATTTAATGAATATTCCATATTTAGTGGTTTTATTAAAGAAACATTACGTTAAAAAAATGGGCGAAAAAAATTACGTAATATAAGAAAAATGAGGGACAAATTTTTTTTGGAAAACAAATACGCTTAGACCCATTTAGGACCCAGATCCGACCCTAGACTCATTAGACCCAGTGGATCTGGGTCTGGGTCTGATATTTTTAGACCCAACGGATCTGGGTCTGATATTTTTAGACCCAACGGATCTGGGTCGGATCTGGATCCACCTCTTAACAAGCGGGTCTGGGTCTGGATCCTGTCGGACCCGATCCAGATCCGACCCATTGCCATCCCTAATCGATGGTGGACAGCGGCACAATTACCCCATACCCGGGGTAAAATGGTAATTTCTTCTCATGAGGTGAAAAGTCAAACAAAGTACTAAGTATAGGCAACAAGGACAGTACTTAGTACAACAATGACTGTATTTTAATACAACAATGACAGTATTTATGCAAACGATGACAATACTTATATAACATGCACTTGTATACATACTTTTACCCATTCGTTTAATATGCAACACTTTTATCCATTCATTTAAGTGGTCTCTTTACTTTTTATATTTCATTACAGTTGTATACATAATTTCCTTTTTTTGGGTGATTGTGACAGTATTTTAATACAACAATGACTGTATATATACAACAATGACAATACTTATATTACCGTTGACAGTATATAACAAGTTAGCAACACTTTTACACATTTATTTAAGGGTGGGTCATGTTTCCAATTTTTTTTTTGGGGTGGGTATGGGGTCCTTATTTCGCTGGTGACCAGCGATGTAGACAACCTCGTCTAGAGGGAAATTAAATAGCATATGAATGCACATGTTGTTTGGTACTACGTAGAACTGTAGAAGATGATAACTAGGAGGTTGTTTTTCGCATATTAGATATGTGTGGCAACACATATATCAACTAAAAGATAAATAACTAAAAGACAAAAAAAAGTACCATTCTGTAAGAAAAAAAGTACCATTTTTGTTTTAAAAAGTACCATATATTTAATTTCTTTTTTGTCATTTTTCCTATTTTGTCTTTTGCTATGATATGTACTTGCAAGCACATATCTGATATCCGAAAATATTTCCTCGATAACTAGTGGCAATCGAAATAAATTTGCATTGTAAATGTGTTGGAAATGTCATATTACATTACCCGTGGACCGTGGTACATCAAGTATCTCATTTTCTTAATTTCTAAATATTGATTATCACCCATTACCCCCAGATGAAAACTCTGTAAAAAGTAGGGATGAAATTTCATTATCATGAACATTATGATGTTATTTATCATTTCAAATTACACATTAAGGATTGAACTACTACGAAACATACTATTAAATGGGTCATAAGTTATGGATTTTATCAAGTATTGAATTGTCCTATACGAGAATGTTGTTGTAAACAATTTCTGTAAAATTAAAATTGCACTACTACAAAAATATCCAAAGAGATCTCTAAAAACAGACCTCTTATCTTAATTAAAAGGTCTCTTTAGTTTAAAAGACCTCATATTATAAATAACGGGTTTCTTTACTCTCTTATATTAACTTGGTCCAACTTAAAGACAACAAAATATAAAGCAGAGACCCGATGACATAGATAGGAGGTCTCTTAGGAAATTATGTATACTTTCTCTCTCTCCATTTTCAATTTTTATTGGGTTTAGTTGGTGTTCTACTTTTAATTGAATATTTAGGTATTTGCAAAGTTTTTCTATGAAATTTGGCCCTGCAAACTCTTACATTTGAACAAATTTCTTCCACATTGTAAGTATGTTTTTCTTCATCTTTTAGTGCTTTAATTTGGATATTTATTTTAACTGGCATTATCCGACTGATTTGTGCATTAGATTGAATCTATCATGTCCGCCTTTTCTCTCTAGGCACAGTCTTGTTTTTGCTACCAAGATATTCTATCTTCAATATTTTGACCAATGTGATTTTCATAGTTGTTTTGGACAATTAGGTAATATGTATGGCTGTGAATATTTCTTTAGAAATAAATTGATGTGTTGTGTTTATGGAAGTAGGAATTACTGTGATTATTGTCTTGAGTTGGAAAATTCCTTTTGACAAGAGGTAGTTTTCTTTTCCAGGGTCTGTGTTATCCCTCTTGTTTATCTCTGTAACTCCAATTTCATGTTTTATCAAATAGTCTATGGCTCTTTACATTTACTAATTGTGAGTGTTTGCTGATTTGTTTTTAATGGCAGGGTGAAGATCATGTGTGCTTGGTCAGGGATTTCACCGGTAATTGGAAAGATCCAATTAAGGCAGTGCACAAAGGAGGCCCAAGATTTGAAATTGAAATTCAACTACCAAAAGGGAAGTAAGTATAAGCTCTGGTGAGCAATACAGTATCATTTTATTATCATAATGGAGCACGAAATAAGAATATTAATTTTTCTTTTCTGCACATCCTTAGTCAAATAGTGGGAGATTAAATTTGCGGGGTGCGGTTGTAATGAATCAGATATTCAATATAAGCAATTAACCAGAATTTAAGCAAGACAAATGGATCAAAATTGAGCAATAGAGGAAGTTGTTAAAGATTAAAGATAGTAGAGATGAGAACACCAGTCTAAGCATTTGAGAGGCTTGTACAATCTTCTTTTTTCTTTGGTCTCTCTCAAAACAGAAAATTACATTCAAAATCAACATTATTCTCTTTCTCTCTCCTCTCTTCCCCTTTTATTACATTTTCATCACAACTTCTTACACCTTTCTAACCAACTATCTAGTACTCTGGTAGCACATATTTTCTTTAATGGAATGATGGTGTCTGCTCATTGTACCCTTTACCTTAAGCCTAAGTCAGCAAAACAGGTGGTCAGATATGTTATTTTCAACAAACTAGACTAAAATTATGATTTCCTTGCTCTTTCCAATTTGTTAGGCTTTGATGATAATGTTTAGCAGTCTGATATTCGTATAAACAAACAGTTATTCCTTCTTTTCTCTCTCTATATCCCTTGCAGGCCTTTAAACTGTTATGATTACATTGAATGAGATAATGCAACTTTCCTCCCTCCATGATAATGTAGAACAATTTTATTTCACACGTCTGTTTGAAAAAATTCTTATTTCTCGTGGTATCCACTCGGGCAAGCAATAGAACTATGATTTCACCACTCTTGTGTGGAACTTGTCTTTTTTAGTTCTTTTGGCTTCGAACAAAATCTGAGCTCTTTTTACGTTCAAACGGTTAATTGCTTTCATGTGAAGTAGATGGTAAATTGTCTATATCACTAAATAAATATTGGTAACCTGCTAATTATGTGG

mRNA sequence

ATGGGGTGTGCAAAGAAATTGTTCATTACCAAGAAGAAGAAGGAAGTGGAGAAAGGGGAGGTGGAGTGTGTAAACGAGATGATGAAAAAGCTAGAAACTGTGTCCCTATGTGTTGAAGAGGAGGTCCAAGGGGAGGGAGTGAAACAAATAGCAACACATGCTGGCCAGACTAGGGGATCGGATGGGGAGAGCAAGGAAACTAGAGTGACGAAACAAGGGTTGCTCCCTGGGAGCGAGGTAGGGCAAGACACGAAAAAGGTGGGTGGGAATGGTACTGATGAGGTGGGGAAAGTGACAGAGGGTGAAGATCATGTGTGCTTGGTCAGGGATTTCACCGGTAATTGGAAAGATCCAATTAAGGCAGTGCACAAAGGAGGCCCAAGATTTGAAATTGAAATTCAACTACCAAAAGGGAAGTAAGTATAAGCTCTGGTGAGCAATACAGTATCATTTTATTATCATAATGGAGCACGAAATAAGAATATTAATTTTTCTTTTCTGCACATCCTTAGTCAAATAGTGGGAGATTAAATTTGCGGGGTGCGGTTGTAATGAATCAGATATTCAATATAAGCAATTAACCAGAATTTAAGCAAGACAAATGGATCAAAATTGAGCAATAGAGGAAGTTGTTAAAGATTAAAGATAGTAGAGATGAGAACACCAGTCTAAGCATTTGAGAGGCTTGTACAATCTTCTTTTTTCTTTGGTCTCTCTCAAAACAGAAAATTACATTCAAAATCAACATTATTCTCTTTCTCTCTCCTCTCTTCCCCTTTTATTACATTTTCATCACAACTTCTTACACCTTTCTAACCAACTATCTAGTACTCTGGTAGCACATATTTTCTTTAATGGAATGATGGTGTCTGCTCATTGTACCCTTTACCTTAAGCCTAAGTCAGCAAAACAGGTGGTCAGATATGTTATTTTCAACAAACTAGACTAAAATTATGATTTCCTTGCTCTTTCCAATTTGTTAGGCTTTGATGATAATGTTTAGCAGTCTGATATTCGTATAAACAAACAGTTATTCCTTCTTTTCTCTCTCTATATCCCTTGCAGGCCTTTAAACTGTTATGATTACATTGAATGAGATAATGCAACTTTCCTCCCTCCATGATAATGTAGAACAATTTTATTTCACACGTCTGTTTGAAAAAATTCTTATTTCTCGTGGTATCCACTCGGGCAAGCAATAGAACTATGATTTCACCACTCTTGTGTGGAACTTGTCTTTTTTAGTTCTTTTGGCTTCGAACAAAATCTGAGCTCTTTTTACGTTCAAACGGTTAATTGCTTTCATGTGAAGTAGATGGTAAATTGTCTATATCACTAAATAAATATTGGTAACCTGCTAATTATGTGG

Coding sequence (CDS)

ATGGGGTGTGCAAAGAAATTGTTCATTACCAAGAAGAAGAAGGAAGTGGAGAAAGGGGAGGTGGAGTGTGTAAACGAGATGATGAAAAAGCTAGAAACTGTGTCCCTATGTGTTGAAGAGGAGGTCCAAGGGGAGGGAGTGAAACAAATAGCAACACATGCTGGCCAGACTAGGGGATCGGATGGGGAGAGCAAGGAAACTAGAGTGACGAAACAAGGGTTGCTCCCTGGGAGCGAGGTAGGGCAAGACACGAAAAAGGTGGGTGGGAATGGTACTGATGAGGTGGGGAAAGTGACAGAGGGTGAAGATCATGTGTGCTTGGTCAGGGATTTCACCGGTAATTGGAAAGATCCAATTAAGGCAGTGCACAAAGGAGGCCCAAGATTTGAAATTGAAATTCAACTACCAAAAGGGAAGTAA

Protein sequence

MGCAKKLFITKKKKEVEKGEVECVNEMMKKLETVSLCVEEEVQGEGVKQIATHAGQTRGSDGESKETRVTKQGLLPGSEVGQDTKKVGGNGTDEVGKVTEGEDHVCLVRDFTGNWKDPIKAVHKGGPRFEIEIQLPKGK
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo10841Spo10841gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo10841.1Spo10841.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo10841.1.exon.1Spo10841.1.exon.1exon
Spo10841.1.exon.2Spo10841.1.exon.2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo10841.1.CDS.1Spo10841.1.CDS.1CDS
Spo10841.1.CDS.2Spo10841.1.CDS.2CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo10841.1.utr3p.1Spo10841.1.utr3p.1three_prime_UTR


Homology
[Close]
BLAST of Spo10841.1 vs. NCBI nr
Match: gi|902207771|gb|KNA15780.1| (hypothetical protein SOVF_095040 [Spinacia oleracea])

HSP 1 Score: 189.9 bits (481), Expect = 3.000e-45
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 1 

		  

Query: 1   MGCAKKLFITKKKKEVEKGEVECVNEMMKKLETVSLCVEEEVQGEGVKQIATHAGQTRGS 60
           MGCAKKLFITKKKKEVEKGEVECVNEMMKKLETVSLCVEEEVQGEGVKQIATHAGQTRGS
Sbjct: 1   MGCAKKLFITKKKKEVEKGEVECVNEMMKKLETVSLCVEEEVQGEGVKQIATHAGQTRGS 60

Query: 61  DGESKETRVTKQGLLPGSEVGQDTKKVGGNGTDEVGKVTE 101
           DGESKE RVTKQGLLPGSEVGQDTKKVGGNGTDEVGKVTE
Sbjct: 61  DGESKEIRVTKQGLLPGSEVGQDTKKVGGNGTDEVGKVTE 100
[Close]
BLAST of Spo10841.1 vs. NCBI nr
Match: gi|731376784|ref|XP_010667673.1| (PREDICTED: phosphoglucan phosphatase LSF1, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 77.8 bits (190), Expect = 1.700e-11
Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 1 

		  

Query: 100 EGEDHVCLVRDFTGNWKDPIKAVHKGGPRFEIEIQLPKGK 140
           EGED VCLV DFTGNWKDPIKAVHKGGPR+EIE++LP+GK
Sbjct: 446 EGED-VCLVGDFTGNWKDPIKAVHKGGPRYEIEVRLPQGK 484
[Close]
BLAST of Spo10841.1 vs. NCBI nr
Match: gi|870841498|gb|KMS95216.1| (hypothetical protein BVRB_010910 isoform B [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 77.8 bits (190), Expect = 1.700e-11
Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 1 

		  

Query: 100 EGEDHVCLVRDFTGNWKDPIKAVHKGGPRFEIEIQLPKGK 140
           EGED VCLV DFTGNWKDPIKAVHKGGPR+EIE++LP+GK
Sbjct: 453 EGED-VCLVGDFTGNWKDPIKAVHKGGPRYEIEVRLPQGK 491
[Close]
BLAST of Spo10841.1 vs. NCBI nr
Match: gi|902175458|gb|KNA08598.1| (hypothetical protein SOVF_161250 [Spinacia oleracea])

HSP 1 Score: 77.0 bits (188), Expect = 2.800e-11
Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 1 

		  

Query: 100 EGEDHVCLVRDFTGNWKDPIKAVHKGGPRFEIEIQLPKGK 140
           EGED VCLV DFTGNWKDPIKAVHKGGPR+EI+I+LP+GK
Sbjct: 243 EGED-VCLVGDFTGNWKDPIKAVHKGGPRYEIDIRLPQGK 281
[Close]
BLAST of Spo10841.1 vs. NCBI nr
Match: gi|747100743|ref|XP_011098472.1| (PREDICTED: phosphoglucan phosphatase LSF1, chloroplastic [Sesamum indicum])

HSP 1 Score: 75.9 bits (185), Expect = 6.300e-11
Identity = 32/40 (80.00%), Postives = 38/40 (95.00%), Query Frame = 1 

		  

Query: 100 EGEDHVCLVRDFTGNWKDPIKAVHKGGPRFEIEIQLPKGK 140
           EGED VCLV DFTGNWK+PIKAVHKGGPR+E+E++LP+GK
Sbjct: 469 EGED-VCLVGDFTGNWKEPIKAVHKGGPRYEVEVRLPQGK 507
[Close]
BLAST of Spo10841.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R8G6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_095040 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.100e-45
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 1 

		  

Query: 1   MGCAKKLFITKKKKEVEKGEVECVNEMMKKLETVSLCVEEEVQGEGVKQIATHAGQTRGS 60
           MGCAKKLFITKKKKEVEKGEVECVNEMMKKLETVSLCVEEEVQGEGVKQIATHAGQTRGS
Sbjct: 1   MGCAKKLFITKKKKEVEKGEVECVNEMMKKLETVSLCVEEEVQGEGVKQIATHAGQTRGS 60

Query: 61  DGESKETRVTKQGLLPGSEVGQDTKKVGGNGTDEVGKVTE 101
           DGESKE RVTKQGLLPGSEVGQDTKKVGGNGTDEVGKVTE
Sbjct: 61  DGESKEIRVTKQGLLPGSEVGQDTKKVGGNGTDEVGKVTE 100
[Close]
BLAST of Spo10841.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B2J7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_010910 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.200e-11
Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 1 

		  

Query: 100 EGEDHVCLVRDFTGNWKDPIKAVHKGGPRFEIEIQLPKGK 140
           EGED VCLV DFTGNWKDPIKAVHKGGPR+EIE++LP+GK
Sbjct: 453 EGED-VCLVGDFTGNWKDPIKAVHKGGPRYEIEVRLPQGK 491
[Close]
BLAST of Spo10841.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DWI1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_010910 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.200e-11
Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 1 

		  

Query: 100 EGEDHVCLVRDFTGNWKDPIKAVHKGGPRFEIEIQLPKGK 140
           EGED VCLV DFTGNWKDPIKAVHKGGPR+EIE++LP+GK
Sbjct: 446 EGED-VCLVGDFTGNWKDPIKAVHKGGPRYEIEVRLPQGK 484
[Close]
BLAST of Spo10841.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPI4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_161250 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.000e-11
Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 1 

		  

Query: 100 EGEDHVCLVRDFTGNWKDPIKAVHKGGPRFEIEIQLPKGK 140
           EGED VCLV DFTGNWKDPIKAVHKGGPR+EI+I+LP+GK
Sbjct: 243 EGED-VCLVGDFTGNWKDPIKAVHKGGPRYEIDIRLPQGK 281
[Close]
BLAST of Spo10841.1 vs. UniProtKB/TrEMBL
Match: A0A068U0P5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00039397001 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.700e-10
Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 1 

		  

Query: 100 EGEDHVCLVRDFTGNWKDPIKAVHKGGPRFEIEIQLPKGK 140
           EGED V LV DFTGNWK+PIKAVHKGGPRFE+E++LP+GK
Sbjct: 483 EGED-VYLVGDFTGNWKEPIKAVHKGGPRFEVEVRLPQGK 521
[Close]
BLAST of Spo10841.1 vs. ExPASy Swiss-Prot
Match: LSF1_ARATH (Phosphoglucan phosphatase LSF1, chloroplastic OS=Arabidopsis thaliana GN=LSF1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.000e-10
Identity = 33/59 (55.93%), Postives = 38/59 (64.41%), Query Frame = 1 

		  

Query: 83  DTKKVGGNGTDEVGKVTEGED--HVCLVRDFTGNWKDPIKAVHKGGPRFEIEIQLPKGK 140
           D  K  G  T  V  V  G +   V LV DFTGNWK+PIKA HKGGPRFE E++L +GK
Sbjct: 445 DDGKHDGTPTHSVTFVWNGHEGEEVLLVGDFTGNWKEPIKATHKGGPRFETEVRLTQGK 503
[Close]
BLAST of Spo10841.1 vs. TAIR (Arabidopsis)
Match: AT3G01510.1 (like SEX4 1)

HSP 1 Score: 65.1 bits (157), Expect = 3.900e-11
Identity = 33/59 (55.93%), Postives = 38/59 (64.41%), Query Frame = 1 

		  

Query: 83  DTKKVGGNGTDEVGKVTEGED--HVCLVRDFTGNWKDPIKAVHKGGPRFEIEIQLPKGK 140
           D  K  G  T  V  V  G +   V LV DFTGNWK+PIKA HKGGPRFE E++L +GK
Sbjct: 445 DDGKHDGTPTHSVTFVWNGHEGEEVLLVGDFTGNWKEPIKATHKGGPRFETEVRLTQGK 503
The following BLAST results are available for this feature:
BLAST of Spo10841.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902207771|gb|KNA15780.1|3.0e-4599.0hypothetical protein SOVF_0950... [more]
gi|731376784|ref|XP_010667673.1|1.7e-1185.0PREDICTED: phosphoglucan phosp... [more]
gi|870841498|gb|KMS95216.1|1.7e-1185.0hypothetical protein BVRB_0109... [more]
gi|902175458|gb|KNA08598.1|2.8e-1185.0hypothetical protein SOVF_1612... [more]
gi|747100743|ref|XP_011098472.1|6.3e-1180.0PREDICTED: phosphoglucan phosp... [more]
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BLAST of Spo10841.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R8G6_SPIOL2.1e-4599.0Uncharacterized protein OS=Spi... [more]
A0A0J8B2J7_BETVU1.2e-1185.0Uncharacterized protein OS=Bet... [more]
A0A0J8DWI1_BETVU1.2e-1185.0Uncharacterized protein OS=Bet... [more]
A0A0K9QPI4_SPIOL2.0e-1185.0Uncharacterized protein OS=Spi... [more]
A0A068U0P5_COFCA3.7e-1080.0Uncharacterized protein OS=Cof... [more]
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BLAST of Spo10841.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LSF1_ARATH7.0e-1055.9Phosphoglucan phosphatase LSF1... [more]
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BLAST of Spo10841.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G01510.13.9e-1155.9like SEX4 1[more]
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GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000023 maltose metabolic process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0005983 starch catabolic process
cellular_component GO:0009569 chloroplast starch grain
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0019203 carbohydrate phosphatase activity
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity