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Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGATCAAGCAAAGGTTAGAAAGAGAAAGAGAAACAGAAACAGAAACAGAAAGAGAGAGAAAGGGTAGATGGGAGAGACAGTACTCGATGACGATGCTCTTCTCAAAGAATTCTTCGCCGAAGTTGGTGAAGTTGAACGAGATAACGAAGTTATCAGGTTCCTTTTTCTTTTTCATTCGTTCCTTTTTTATTGAATTTCTTTTATTATTTTAATTCATTGCCTCATTCAAGCTTTTATTTCCAGTTAATTTCATGCGCAATACTTACATTTGTTTGCTCGTTTGATTTCTATTTGTGATGAATTTTAAAAATTAAATGCAAACAATGAATAACGAATTCTAATTAGTTGAAATTAGTCAATTTGTTTGCTCAAAATTTTAATTGATTAGGGTTTCCGTCCCTATGCTGATTGTGTGTGCAAAGGGGAATCACGTTGCTTCGTCGAGATTTCTAGGATGAGTATGTCTAATTTGAGAGCTCCTTATGATCAAATGAGGAGCTGGATATCATCATACGTTTTATTCATTATAAAAAACAGGTATTGGTTGTCTGAATAAAAACATAAATATACATATTTTACCTAATTTTCTGCTCTAGGCTGGACACTGGAACGCAATTCACTTCCCAGTTCTGTTAAATTATGCCAAAAAATGTACCACTCACACGTACTCATTCGCCACTTAGGATTGCAATTTGCAGGAGATTAATAAATTAGGTACTAACATTGACATAGATGAATCCGGGTAACTTTTCAGTTAAGGTGAAATCTTTATCCAAGAGATGTAGGGTCATACGGGAGGGATCCTGGATCAATTTAAAACTAACTAAATAACTGATTTTGGTCTTTGATTTGCTTTCTTCTCGAAATTCTTGCTCTTGCTAGGAGTTTTATGCAATGGAGTTCCTTTAGTAGATTGAAGAGATGCAGTTAAACATTATTTTACGTATTTGGAGTTGGAGCTCTTTTGTTTTAATGTTTGTCCTTTATGTAGACAGGAAGAAAACTGAAGTAAAGGATACGATATTGGTTGATTTGTTCATCGACAATTAGAGTTTGATTTATAGTTTGTAGTTTTTTTACTAAGTGTTTTCTTTGTGGAAAGAATACTGCAGGGTATTTGCTGGTGACCTGGGACAAATTCAAAGTTTTGTCCTTGATGCAAATTTAATTAGGTGCCTTCCAAATTCCAATGCATAGCTTAGTTGGTAAAGAGAAAGGGGGCAAAGTTTGGAAATTGATGGCATGTCCAGGAAATCCTGTGACGAACACAACCACTTGTGAAATGACCAGTTGAGGCACATGTTGCAACTTACCTCATCCACGATGCTCGAGTGGCCGGGCGGTGGGGGCCTGTGGGGAGAGGGTTTCGCCTTTTGGGAGAGGAAATTTACTTTGGGCATTTCTCATTTTTTTGTTCTTTTTCTTCAGATGCTCCTTTATGAAGGATGTTTTTGCTCTTTAGAAACTTATCGTGATCTTTGGACTGTGGGGTAGTTCATTAACGTGTTGTCATCAGTTTGAGGGAAGAGGAGGAAAGGGAGTCATAATGAAAATCTCTTTGATTTCTCTGGTACTATGAATTTTAGAAGGCTTTACTGTGTGTGAATTTGTATTATTCACTGAGTTGCTGCAAGAAAATAGTATTTTGAAGTTGGAAAGTAAGTGATTAGTTTGCTTTTCAAAAGGTAGTGTGTGTTGTTTGTGGAGAGTAAAGTAGATGGGTCACAATAACTATGAACTTGATAGCTGGAACTAATAAAGTAGCTCTTCTTTATTGTCTTTCTTCTCTATGACTTACATGGTTAATGCTACAGGATCCTATCGTGCTTCAAGTTGAATCCATTTGAGCATCTTAGCTTACCGTTTGATTCATCTATAGATGATGTGAAAAGGCAATATAGAAAGGTAACTTAAAATACAGACTTGGGCAATATCTTTATTTTATTTTATGTTTTCCTTATTTAGCTTCTCATTTATTGTGAGACATGTAGATATCGTTGATGGTTCACCCTGACAAATGCAAGCATCCACAAGCGAAGGAGGCATTTGGAGGTGTGTCAAAATGTGCATTAACTCGAGAAAATAATTTTTTATTACATAATAGTATTTTTCTGGGATGTAGGTGGACACATGCGGTTCACCTTGACGTGCTAGTTGTGCACTTGATACATCCTATATGCTTTCACTTTTCTTCCTTGTAGACCTAAAGCTTATATGCATGTTTTGTTCCCTTGATTCGTGAAATACATATGACTTTTTAACACTGATCAATTTGTGAACCTTTTTTGTATTTTTACTGTGAAGACTGTTTCTGTAGTGTATCTTGTTTTTATTTGCTAATGTGTTCCTCCTGACTTACACAGCACTAGCAAAAGCCCAACAGCAACTTCTTGATTCACAAGAAAGAGAGTATGTTCTTAGCCAAGTTAAATCTGCAAAAGGTCAGCAACCAGCTCATTTATGACATCAACATAGTTGTTTTATTCTGTTGTGACTCATTGCCAAAGTTAATTTTTAGAAATTGGCTATGGGTCATAATGCTTAAAATTTTCATCATAATGGTCTCGGGTATTTTTTTTTACATGATTCTCTGCTCTTTTCTTCTGGCACATGTTTTATACCTGTGTCTCTTTGGAGATATCCAATAATTCAGACATTCCTTACATCCGTTTCCATTGTAATTGCAGAGGAACTTCTATCTGTGAGGAAGAAAAAGCTAAAGAAAGAGACTGCTTCAAAAATAAAATATTTGGTTGACGAGGTAAGTGCACTTGCCATTTCCTCCTGATTTTTTTCTTCCAACCAGCTTGTTCTAGAAAATTGAAGAAATTTTAGCTTCTTGATGATTTCCTTTGCTCTCTATGTTCTCAATTCATGTGTTTTATATCACTATGCATCCCTGCTGTTGTTTTCTCATTGTTTGAAGATGGAAACCACTCATTGCTTCTTCTATTCAACCCTGATGTGTCCATCTTATTGTTGTTCTGATCATGATGTTGAGGTGCTGCTGGATTGCTTGCATCACACGTGTGTAGTTTGCTTTTTATCTTGACTCCTCGAACTTCCTAAATATGTTAGGGAAATTTTAGCTTCTGCCTTGATGATTTCCTTTGCTCTCTATGTTCTCAATTCATGTGTTTTATATCACTATGCATCCCTGCTGTTGTTTTCTCATTGTTTGAAGATGGAAACCACTCATTGCTTCTTCTTTCAACCATGATGTGTCCATCTTATTGTTGTTCTGATCATGATGTTGAGGTGCTGCTGGATTGCTTGCATCACATTAGCCGTGTGTAGTTTGCTTTTTATCTTGACTCCTCGAACTTCCTAAATATGTTAGGGAATTAGGTAGAGATTGAAAAGGATAATTTTGTGAGTGACCATTCAGAACCATTCAGAATCTAAATGCTGTAAGCCTGTAACCTTGAAACTAGTATCTTCCTGAATTGAAGAATTATTTATTCAGTTAGTATTTGATAATGCTTTGTGATCTTAAGATTTCGACCAGTTTCTCTTCCTTGAGTTCCTCCTCAACTCTCATAGCCCCAATAACCTGCTGTGCGTAATTTGCCATGTGCTAGCCTCTTTTATTCTGGAGAATTAGATATTCATGTCTTAATTATAACATACTGATGTTTTCATCACTTGTCACTTTGGTAGCATTTCTTACAACTGCTTCTCTCCCTGGCGAAAGGACAACAATATGTACTGAAACCTTTTCTGGTTTTTCACGTGTGACATGGAAATTGACATAAAACAGCACTGGATATGATACAAACGCAAAGAAAAGGGATCTTGAGTTTAATGTAAATAACTAAATAAAGACTTATGAGGGTCCAACTTCTAGATTTGTCCACCTGACCATAATAAGGGCGTACTTATTATTTTCTCTCTTAGGTTTTGTACAAATTGGAAGTAGTTTAGTGCTCAAGTAACTGAATATATACCTGGTGTTGACAGAAATTTGATAAAGAATATGAGTTGTCAGAGGAGTTTAAACAGCAGCTAAAGTTGAAAGTACGAGAAATTCTAACTGAGCAAGAGTGGCGGAGGAGAAAGATGGCTATGAGAGTAATTTTCAAACCAACTATATTATTTTCTTGGATGTCTCATTTTTTGTGTGCTCCACCTTATTCCCTTTCTGCCGTTTCTAGATATCGGAGGAAGAGGGCAGGCTAAAGAAAGACGAAGCGGAACAAAAGGAGGTTTGGAAAAGGAAGCGAGAGCATGAGGAGCAGTGGGAAGGAACAAGAGAAAAAAGGGTTTGACTATTCCCCTTTTTTCTTCTCTGTGTGTTTTGTTAAGAACATTTGCAGTAGTTCTTGTAAACCAAATTACTATGCTGTCACCCCAGTATATTCTACTCCATCGACAATACTCTTTGGTTTCACCACCAAATCACTATATTAAGCTGTTACTAGTACAGAGTATAATCTAACAACTGCATATACTGTGTGTTTTCACATTTTATTTACTAACGCAGACACGGAGTATAATCTAACAACTGCGATGTACTGTGAGAAAAGGTTTTCTGTATTTGTCATGATGCCCAAGTATAGTCAAGTGAACCTGCCAATAGTTGATTGCCCTGTGTTTTTCTTTACATGCAGGTTTCTAGCTGGAGAGATTTCATGAAGAGTGGAAAGAAGGTAAAAGTTGTGATGTACTGTTTTTTTTTTTTTTAATTACAGTAGCTGTGTGTAAAATGGGTTGTTTAACATACGCAAGATGTTTACATTATACTGACTACGCAGGGAAAAAAGGGTGAGATTCGGCCACCAAAGCTTAAAACAGAAGATCCGAACAAATCTTATGTCCAGAGGCCAGTAAAGCGAGGATAATGTGTCAGCTGGGATGCAAGCAGAAGAAAGGCCGTAATTTTATATGTCCATGGTAAAGCTTGTAGAGTATCCAATGTTTTGGGCATAACTCCTTCACTGTGCCATACATTCCTCTTGGGCAGAATGATTGTAAGATATGGTATAAACTTCAACTCTAATTCAGCGGATGTTTTTCGAGTTGTGGTGGAGGATTGTAGTTCTTGTAATTTGTCGCTGATTCTGCAGGGTACAGAGTGTCATATCCTACAGAAAGTTTGTTTGCAATTATGAATGACACAGTTTTAGATTTTTCATTAATTGGTTATTAAAACCTTGTAAATAAGAACTATTTATAGACTTGTAGACTTATAGTCGCACATATTTCTCCATTAATAAAATTAGATATACTCTCTCGCCACTTTAAACATAATTTGTTTTCACAAATTACGAGTTTCGAAAGTTTTTAAGATTGTTCCGATCAAGCAAAGGTTAGAAAGAGAAAGAGAAACAGAAACAGAAACAGAAAGAGAGAGAAAGGGTAGATGGGAGAGACAGTACTCGATGACGATGCTCTTCTCAAAGAATTCTTCGCCGAAGTTGGTGAAGTTGAACGAGATAACGAAGTTATCAGGATCCTATCGTGCTTCAAGTTGAATCCATTTGAGCATCTTAGCTTACCGTTTGATTCATCTATAGATGATGTGAAAAGGCAATATAGAAAGATATCGTTGATGGTTCACCCTGACAAATGCAAGCATCCACAAGCGAAGGAGGCATTTGGAGCACTAGCAAAAGCCCAACAGCAACTTCTTGATTCACAAGAAAGAGAGTATGTTCTTAGCCAAGTTAAATCTGCAAAAGAGGAACTTCTATCTGTGAGGAAGAAAAAGCTAAAGAAAGAGACTGCTTCAAAAATAAAATATTTGGTTGACGAGAAATTTGATAAAGAATATGAGTTGTCAGAGGAGTTTAAACAGCAGCTAAAGTTGAAAGTACGAGAAATTCTAACTGAGCAAGAGTGGCGGAGGAGAAAGATGGCTATGAGAATATCGGAGGAAGAGGGCAGGCTAAAGAAAGACGAAGCGGAACAAAAGGAGGTTTGGAAAAGGAAGCGAGAGCATGAGGAGCAGTGGGAAGGAACAAGAGAAAAAAGGGTTTCTAGCTGGAGAGATTTCATGAAGAGTGGAAAGAAGGGAAAAAAGGGTGAGATTCGGCCACCAAAGCTTAAAACAGAAGATCCGAACAAATCTTATGTCCAGAGGCCAGTAAAGCGAGGATAATGTGTCAGCTGGGATGCAAGCAGAAGAAAGGCCGTAATTTTATATGTCCATGGTAAAGCTTGTAGAGTATCCAATGTTTTGGGCATAACTCCTTCACTGTGCCATACATTCCTCTTGGGCAGAATGATTGTAAGATATGGTATAAACTTCAACTCTAATTCAGCGGATGTTTTTCGAGTTGTGGTGGAGGATTGTAGTTCTTGTAATTTGTCGCTGATTCTGCAGGGTACAGAGTGTCATATCCTACAGAAAGTTTGTTTGCAATTATGAATGACACAGTTTTAGATTTTTCATTAATTGGTTATTAAAACCTTGTAAATAAGAACTATTTATAGACTTGTAGACTTATAGTCGCACATATTTCTCCATTAATAAAATTAGATATACTCTCTCGCCACTTTAAACATAATTTGTTTTCACAAATTACGAGTTTCGAAAGTTTTTAAGATTGTTC ATGGGAGAGACAGTACTCGATGACGATGCTCTTCTCAAAGAATTCTTCGCCGAAGTTGGTGAAGTTGAACGAGATAACGAAGTTATCAGGATCCTATCGTGCTTCAAGTTGAATCCATTTGAGCATCTTAGCTTACCGTTTGATTCATCTATAGATGATGTGAAAAGGCAATATAGAAAGATATCGTTGATGGTTCACCCTGACAAATGCAAGCATCCACAAGCGAAGGAGGCATTTGGAGCACTAGCAAAAGCCCAACAGCAACTTCTTGATTCACAAGAAAGAGAGTATGTTCTTAGCCAAGTTAAATCTGCAAAAGAGGAACTTCTATCTGTGAGGAAGAAAAAGCTAAAGAAAGAGACTGCTTCAAAAATAAAATATTTGGTTGACGAGAAATTTGATAAAGAATATGAGTTGTCAGAGGAGTTTAAACAGCAGCTAAAGTTGAAAGTACGAGAAATTCTAACTGAGCAAGAGTGGCGGAGGAGAAAGATGGCTATGAGAATATCGGAGGAAGAGGGCAGGCTAAAGAAAGACGAAGCGGAACAAAAGGAGGTTTGGAAAAGGAAGCGAGAGCATGAGGAGCAGTGGGAAGGAACAAGAGAAAAAAGGGTTTCTAGCTGGAGAGATTTCATGAAGAGTGGAAAGAAGGGAAAAAAGGGTGAGATTCGGCCACCAAAGCTTAAAACAGAAGATCCGAACAAATCTTATGTCCAGAGGCCAGTAAAGCGAGGATAA MGETVLDDDALLKEFFAEVGEVERDNEVIRILSCFKLNPFEHLSLPFDSSIDDVKRQYRKISLMVHPDKCKHPQAKEAFGALAKAQQQLLDSQEREYVLSQVKSAKEELLSVRKKKLKKETASKIKYLVDEKFDKEYELSEEFKQQLKLKVREILTEQEWRRRKMAMRISEEEGRLKKDEAEQKEVWKRKREHEEQWEGTREKRVSSWRDFMKSGKKGKKGEIRPPKLKTEDPNKSYVQRPVKRG Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo10880.1 vs. NCBI nr
Match: gi|902234271|gb|KNA23388.1| (hypothetical protein SOVF_024880 [Spinacia oleracea]) HSP 1 Score: 458.0 bits (1177), Expect = 1.000e-125 Identity = 244/245 (99.59%), Postives = 245/245 (100.00%), Query Frame = 1
BLAST of Spo10880.1 vs. NCBI nr
Match: gi|731348340|ref|XP_010685447.1| (PREDICTED: J domain-containing protein spf31 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 425.2 bits (1092), Expect = 7.500e-116 Identity = 226/245 (92.24%), Postives = 240/245 (97.96%), Query Frame = 1
BLAST of Spo10880.1 vs. NCBI nr
Match: gi|802562393|ref|XP_012066344.1| (PREDICTED: J domain-containing protein spf31 [Jatropha curcas]) HSP 1 Score: 388.3 bits (996), Expect = 1.000e-104 Identity = 205/243 (84.36%), Postives = 227/243 (93.42%), Query Frame = 1
BLAST of Spo10880.1 vs. NCBI nr
Match: gi|357453255|ref|XP_003596904.1| (chaperone DnaJ domain protein [Medicago truncatula]) HSP 1 Score: 387.5 bits (994), Expect = 1.700e-104 Identity = 208/250 (83.20%), Postives = 226/250 (90.40%), Query Frame = 1
BLAST of Spo10880.1 vs. NCBI nr
Match: gi|955353812|ref|XP_003540280.2| (PREDICTED: protein FAF-like, chloroplastic [Glycine max]) HSP 1 Score: 387.5 bits (994), Expect = 1.700e-104 Identity = 205/250 (82.00%), Postives = 229/250 (91.60%), Query Frame = 1
BLAST of Spo10880.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RV91_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_024880 PE=4 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 7.300e-126 Identity = 244/245 (99.59%), Postives = 245/245 (100.00%), Query Frame = 1
BLAST of Spo10880.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BY73_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g171200 PE=4 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 5.200e-116 Identity = 226/245 (92.24%), Postives = 240/245 (97.96%), Query Frame = 1
BLAST of Spo10880.1 vs. UniProtKB/TrEMBL
Match: A0A067L3B9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23903 PE=4 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 7.100e-105 Identity = 205/243 (84.36%), Postives = 227/243 (93.42%), Query Frame = 1
BLAST of Spo10880.1 vs. UniProtKB/TrEMBL
Match: I1LU04_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G189400 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 1.200e-104 Identity = 205/250 (82.00%), Postives = 229/250 (91.60%), Query Frame = 1
BLAST of Spo10880.1 vs. UniProtKB/TrEMBL
Match: A0A0B2Q9N6_GLYSO (DnaJ like subfamily C member 8 OS=Glycine soja GN=glysoja_035071 PE=4 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 1.200e-104 Identity = 205/250 (82.00%), Postives = 229/250 (91.60%), Query Frame = 1
BLAST of Spo10880.1 vs. ExPASy Swiss-Prot
Match: DNJC8_HUMAN (DnaJ homolog subfamily C member 8 OS=Homo sapiens GN=DNAJC8 PE=1 SV=2) HSP 1 Score: 90.5 bits (223), Expect = 2.700e-17 Identity = 80/237 (33.76%), Postives = 139/237 (58.65%), Query Frame = 1
BLAST of Spo10880.1 vs. ExPASy Swiss-Prot
Match: DNJC8_MOUSE (DnaJ homolog subfamily C member 8 OS=Mus musculus GN=Dnajc8 PE=1 SV=2) HSP 1 Score: 89.4 bits (220), Expect = 6.100e-17 Identity = 77/237 (32.49%), Postives = 139/237 (58.65%), Query Frame = 1
BLAST of Spo10880.1 vs. ExPASy Swiss-Prot
Match: DNJC8_RAT (DnaJ homolog subfamily C member 8 OS=Rattus norvegicus GN=Dnajc8 PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 6.100e-17 Identity = 77/237 (32.49%), Postives = 139/237 (58.65%), Query Frame = 1
BLAST of Spo10880.1 vs. ExPASy Swiss-Prot
Match: SPF31_SCHPO (J domain-containing protein spf31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spf31 PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 5.200e-16 Identity = 72/209 (34.45%), Postives = 109/209 (52.15%), Query Frame = 1
BLAST of Spo10880.1 vs. ExPASy Swiss-Prot
Match: DNAJ_METAC (Chaperone protein DnaJ OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=dnaJ PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.700e-6 Identity = 24/60 (40.00%), Postives = 42/60 (70.00%), Query Frame = 1
BLAST of Spo10880.1 vs. TAIR (Arabidopsis)
Match: AT5G22080.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 380.9 bits (977), Expect = 5.700e-106 Identity = 204/246 (82.93%), Postives = 224/246 (91.06%), Query Frame = 1
BLAST of Spo10880.1 vs. TAIR (Arabidopsis)
Match: AT1G65280.1 (DNAJ heat shock N-terminal domain-containing protein) HSP 1 Score: 65.9 bits (159), Expect = 4.100e-11 Identity = 44/133 (33.08%), Postives = 76/133 (57.14%), Query Frame = 1
BLAST of Spo10880.1 vs. TAIR (Arabidopsis)
Match: AT3G57340.1 (Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977)) HSP 1 Score: 52.8 bits (125), Expect = 3.600e-7 Identity = 27/61 (44.26%), Postives = 43/61 (70.49%), Query Frame = 1
BLAST of Spo10880.1 vs. TAIR (Arabidopsis)
Match: AT5G05750.1 (DNAJ heat shock N-terminal domain-containing protein) HSP 1 Score: 52.0 bits (123), Expect = 6.100e-7 Identity = 28/73 (38.36%), Postives = 46/73 (63.01%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo10880.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo10880.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo10880.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo10880.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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