Spo10916.1 (mRNA) | SpinachBase

Overview


Name	Spo10916.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	ATP-dependent Clp protease proteolytic subunit
Location	SpoScf_03244 : 6262 .. 10800 (+)
Sequence length	1589

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATAAACGATCCACACGGCCATATGGCCCATATCCACCCACGAACGAGTGAACAACTCGGTTTGACCCGTATGGTCCACTCGACACATGCCCAACTATTTACCCAACCCATTTCATTCACCCGAATTAACCAGGGAGATATTCCGAAAACGGTGTCGTTTTGGAATTTCTATCATTGAGAACAATCTGTACAGCAGAGTCGTCTTCTTCACTCACACCTTCCTCTTCCTCTCTCTCCTCAACACTCACTCTAAAATCACAAAACTCGAGCAGAAAAAATGGTGGCAGCTGCAATTTCACCCTATTTCACCTGCTCTCCAATTTCTTCTCAATCCACCAAAACCTCTCCATTTCCATTTCTCTACCAAAACAGGTAAAATCTTCTCGTTAATTTCCCCTATTTTTTCTTTAATTTCTCTGATTTTTTTTATATTGGAAGTTTATAATTCATTATTTCCAATTTCAGAAGCTCAAAAAAATCGATTGTCTCTGTACTATCCAGTCCCTCCAGCAATTATTCTTCTCTTTCTGGTAATTTTGTTCTTACTATCGGCAAAATTATCCCTTAATTTTTTTTTCCCCGAAATTTGAATTGTTTTAAATTTGCTGTATTTTTTGCAAACCCTCGTAATTAGACTGATTAGCTGTGGAACTTTCTTGATTAATAGTTTCCCAATTGATTGATAAAGCATGATTGCAAGTAGTAATTTAGTGGGCGTGAATTGAATGACTGTTTATTTCATCTTTTTGTTGACGATTGTTTGTTGGTTTAGCATTTTTTTCGCGAAAAAGAAAGGGGTTTTGAATTGGAATAGCATGATTGAGTTGTGGGATTGCCCATTTGTTTGAAGAAAGGGAACTTAGAATTGGAAATGTATGAACATTAGAGTTATGGGTTTTTTTCCCATAATATGCCACATCAATTAGGGTTATAATTTTATTTGAAGGGGAGTATGCCATGGGATATCCTTGTTTATTAGTAGTCAAGTATGAACGAGGTTTTAATGTGGAAATTGGCAAGAATGTTGGAGGAAACAACCGCGTAACAATTAAGGATTCTATCAAAGATAACTTGAATCCATCTGCAATAGTACTGTACGATAAATTTAGTGAATCTCCTTGGAGTGTGTATCTAGGTTCCAGGGCTCCAAATGGTCTGTTTATAACTTTACATTGTCTTCTCTTGAGGATGAGTGACTAGGCGAGGCCGTGAGGGAGTGAGAGAAAAGTGCAGAAGATTTTTTGGATTTCTTTTCTATGTTTAGCTTCACTGTCAACTTGCTGTGTGGCCTGTGTCACTTACATTCTGCAATGCATGCAGGATTATCAAGTAAAAGCATTGGTCTACCTTTAAAGCCCGACCAGTTTGGCCAACATAATACGACTCTAAGGTACGTTGTTATCCGGGTCAAGATATTTGTGCATCCGTCATTCTGAATCAACTTCTCTGTGGTTCTGATGAGTAAATTGCATTAATAGACAGAGCCCTACAAGAATTTAGAGGGAAGAACAGTAGACTTTAATTTATCTATTGAACTTATTCTGGTAAATCATATGTGCATATATTGTTACTGTGATTATTAGCATTTGACATGGGTTATTTAATAGGGAAATAAGGGAGGAATTTGTGGTCTCATTACTCATTAGGTATATCATGTGACATAGGATGAACCGTTAAATGTCCTCTTCCTAAATCATTGTTTTCATAGTTATCAGGCCTTCAACCATATGGGTTACTGCTTAAGAAATGTAGAGTTACATCTCAGTAGCAGCAGAGGGAAAGGACTAAAGGAGTCAAAGGTCTCTTTTATTGATGTCAGTATCTAATGTCATACGAGACATGATTTATAACAGTGTGCAGATTGGAATTATGCGTTTTTTCCCTTTATATTTTTATGGCTATTGCCTTGCAAGTCACATTTTTGCTTCATTCTCTTGCATTTTGTTCCAGCAATGGGCCTATTGAAGCAAGAAAGGGTAACCCACCTGTAATGCCAGCTGTGATGACACCAGCAGGGCCCTTTGACCTTTCTAGCGTATTATTCAGGAATCGGATCATATTTATTGGGCAACCAGTGAATTCTCAGGTGGCTCAACGTGTTATATCTCAGCTCGTAACTTTGGCAACTATTGATGAAAACTCAGACATACTGGTATTCTTGTCAATATCATTTGCTCTTTCCTTCTCATTTCAATCTTTGCATCAAGCCTCAGGGGTTAATGTTTTTGGCTTAATGTTTTTGGCTGATGGGTATCTCTTCCACCTTCTCAGATTTATTTGAACTGCCCAGGTGGAAGCACATATTCCGTATTAGCGATTTATGACTGCATGGCTTGGGTAAGCTATCCAAGGCTATTTTGCATTTGTTGAGGCTGCTGGGGGAGATTTGTTATATTTGAATTTTTTATGCACAATGGGGTGCACCACCTAAAACTGAGACATGCTTTACTGGGGTTGTAGTGGATTCAGAATCTTTTGTAAATTCCTGGAGTTTGACCATCCTGTGGTTCATATTAGTAAAAGAATTCCAGAAAGCTTCCGCTTATGTAGAGTATATTCGTTTTCAGATAAAGCCAAAAGTTGGGACAGTTTGTTTTGGTGTAGCTGCAAGTCAAGGTGCGCTTCTCCTTGCCGGTGGAGAAAAGGGGATGCGTTATGCAATGCCGAATTCACGCGTTATGATCCATCAACCTCAGAGTGGATGTGGGGTATGAGTTTATTTCTCATGTCATAGCTATGATGATGCAGCAATTTGTACCAGTGGTTCTTGTTAATATATTGCACATAATCTTTGCATGTTTCTTGTAGGGTCACGTTGAGGATGTCAGGCGTCAAGTGAATGAAGCGGTTCAGTCTCGCCATGTTAGTTTCAGTCTCTATTCCCCATTTTTTTCAAGCAAGTGTAACAAAGAGTCCTTGTTCAGCATTCACATGAAATTTATGTAGCCATTTCAAAACGGAATCATCATATTTTATATGCGTATTAGTGGTAGTGGCTAGCCAGCTAGACGCATATCTTAGTATGATTTACATATACCTATTTAGTTTGCTGGTTTGCGTTGCGGTACCACTGAGAGTACTCCTCGTCGTAGAATAGAGGAACTTAACTTTCTTCCTTGTGGGTGTATTGCAGAAAATTGACCAAATGTATGCTGCATTCACTGGTCAATCACTTGAGAAAGTACAGCAATACACGGAGAGAGATCGTTTCTTATCCGTCACAGAGGTAATTTCAAGCAAGTTACTGTTGGATATCTGGGCTCCTCAAATGCCCTTCTCTAACTGGAAAAACTCCTTTAATTTTGAGCACAGTAATAGGCCCATTGCTTGCAAAGTAAAATTTTGTTCTTGAAGTTTTAGAAAGTTCAGTGCAAACTTTCGCTTGGAAAAGAGCCATATTTACAACATTTTTTTTGCAGTTCTTGGCTTCTGAGTTATGAGTTCTGACCATGGTAAAATGCCTGGTAATGGACAAAGTCTGGAATCTTAGTAAAACAATTGCACTGTAATGATACTTGTCTCTACAGAAGTGGGTTCGGTTCATAATCCAAAATTTGCATGTTCTTCAAAGTACAAACTGAAATCTTGAAATTTTGTTTCTGTATCCAGATTGGAAACTTTAGTCATGATTCCTGATTTTACAGGCGTTCTTGTAGCTGTTCCTGTTGGTCTTTAGTCCTTTACCAAATCTATTAAACTACTCCCCGTGTAATAGGTATCTTTACATTTAGAAAAGGACTTTAATGACTGTGGAAGTAACGAATGCGTCTTTAGAGTTTTTAGAACAGGATAATAGTTAACAACATAAGATATTTATTAGAATAGGATAATAGGTAAGAATGTAAAATGAACCCTTTTTCCTTCACTAAGAGAACAGAAAAAGCAAAGTTATGCTGTAGGAGGGGAAATTTCTGTTGATGTATATTTTTTCCTTCTAGTAGTAGTGTTCATGGCTTTCTTTGGCTTCTTAACATGCTTGAGTCCTCGAATTCGATTCTTTTGTTCTTTTGCAGGCCATGGAGTTTGGTCTTATAGATGGCATTTTAGAAACCGAGTATTGAGGATGCTGCATTTGACGTGGTGGGATCATTTCATGGATGCGACTTTCATTGCTGTTGTACCAGTAGTATAGCACACAAATTATCAGACACTAATTTTGATATATTTCGTATTGCAATCTCAGCTTAACTAATTAAGTTACGACACTGTATTTTTTTATTTTGGGTTCTACTACGAGGAGTTCCCACCGCCTTCGGCGAGTGGACTAATCTCCCGCGGGAGTTTGCATAAGATACGTCACTGTAATAGTAAGGTTTATGGTTGTTGTCCTTGTATATTTTCAAAGGGGAAATTGATTTGATTGGTTATTTGCAGGCAAATAGTAAATGAGAGAGACTAATATTTTCTGGGTTTTTCCCCGATTAGCGGTAATTTCCAATTGGTTAGACTCCGTACACTGTTAAGCAACTCAAAATCTGTAGTTAAAAACCTGCTTCTAATGCAAGATTAGTTGTGAAAAATGGTTTAGTAATCCTCGCG

mRNA sequence

CATAAACGATCCACACGGCCATATGGCCCATATCCACCCACGAACGAGTGAACAACTCGGTTTGACCCGTATGGTCCACTCGACACATGCCCAACTATTTACCCAACCCATTTCATTCACCCGAATTAACCAGGGAGATATTCCGAAAACGGTGTCGTTTTGGAATTTCTATCATTGAGAACAATCTGTACAGCAGAGTCGTCTTCTTCACTCACACCTTCCTCTTCCTCTCTCTCCTCAACACTCACTCTAAAATCACAAAACTCGAGCAGAAAAAATGGTGGCAGCTGCAATTTCACCCTATTTCACCTGCTCTCCAATTTCTTCTCAATCCACCAAAACCTCTCCATTTCCATTTCTCTACCAAAACAGAAGCTCAAAAAAATCGATTGTCTCTGTACTATCCAGTCCCTCCAGCAATTATTCTTCTCTTTCTGGATTATCAAGTAAAAGCATTGGTCTACCTTTAAAGCCCGACCAGTTTGGCCAACATAATACGACTCTAAGCAATGGGCCTATTGAAGCAAGAAAGGGTAACCCACCTGTAATGCCAGCTGTGATGACACCAGCAGGGCCCTTTGACCTTTCTAGCGTATTATTCAGGAATCGGATCATATTTATTGGGCAACCAGTGAATTCTCAGGTGGCTCAACGTGTTATATCTCAGCTCGTAACTTTGGCAACTATTGATGAAAACTCAGACATACTGATTTATTTGAACTGCCCAGGTGGAAGCACATATTCCGTATTAGCGATTTATGACTGCATGGCTTGGATAAAGCCAAAAGTTGGGACAGTTTGTTTTGGTGTAGCTGCAAGTCAAGGTGCGCTTCTCCTTGCCGGTGGAGAAAAGGGGATGCGTTATGCAATGCCGAATTCACGCGTTATGATCCATCAACCTCAGAGTGGATGTGGGGGTCACGTTGAGGATGTCAGGCGTCAAGTGAATGAAGCGGTTCAGTCTCGCCATAAAATTGACCAAATGTATGCTGCATTCACTGGTCAATCACTTGAGAAAGTACAGCAATACACGGAGAGAGATCGTTTCTTATCCGTCACAGAGGCCATGGAGTTTGGTCTTATAGATGGCATTTTAGAAACCGAGTATTGAGGATGCTGCATTTGACGTGGTGGGATCATTTCATGGATGCGACTTTCATTGCTGTTGTACCAGTAGTATAGCACACAAATTATCAGACACTAATTTTGATATATTTCGTATTGCAATCTCAGCTTAACTAATTAAGTTACGACACTGTATTTTTTTATTTTGGGTTCTACTACGAGGAGTTCCCACCGCCTTCGGCGAGTGGACTAATCTCCCGCGGGAGTTTGCATAAGATACGTCACTGTAATAGTAAGGTTTATGGTTGTTGTCCTTGTATATTTTCAAAGGGGAAATTGATTTGATTGGTTATTTGCAGGCAAATAGTAAATGAGAGAGACTAATATTTTCTGGGTTTTTCCCCGATTAGCGGTAATTTCCAATTGGTTAGACTCCGTACACTGTTAAGCAACTCAAAATCTGTAGTTAAAAACCTGCTTCTAATGCAAGATTAGTTGTGAAAAATGGTTTAGTAATCCTCGCG

Coding sequence (CDS)

ATGGTGGCAGCTGCAATTTCACCCTATTTCACCTGCTCTCCAATTTCTTCTCAATCCACCAAAACCTCTCCATTTCCATTTCTCTACCAAAACAGAAGCTCAAAAAAATCGATTGTCTCTGTACTATCCAGTCCCTCCAGCAATTATTCTTCTCTTTCTGGATTATCAAGTAAAAGCATTGGTCTACCTTTAAAGCCCGACCAGTTTGGCCAACATAATACGACTCTAAGCAATGGGCCTATTGAAGCAAGAAAGGGTAACCCACCTGTAATGCCAGCTGTGATGACACCAGCAGGGCCCTTTGACCTTTCTAGCGTATTATTCAGGAATCGGATCATATTTATTGGGCAACCAGTGAATTCTCAGGTGGCTCAACGTGTTATATCTCAGCTCGTAACTTTGGCAACTATTGATGAAAACTCAGACATACTGATTTATTTGAACTGCCCAGGTGGAAGCACATATTCCGTATTAGCGATTTATGACTGCATGGCTTGGATAAAGCCAAAAGTTGGGACAGTTTGTTTTGGTGTAGCTGCAAGTCAAGGTGCGCTTCTCCTTGCCGGTGGAGAAAAGGGGATGCGTTATGCAATGCCGAATTCACGCGTTATGATCCATCAACCTCAGAGTGGATGTGGGGGTCACGTTGAGGATGTCAGGCGTCAAGTGAATGAAGCGGTTCAGTCTCGCCATAAAATTGACCAAATGTATGCTGCATTCACTGGTCAATCACTTGAGAAAGTACAGCAATACACGGAGAGAGATCGTTTCTTATCCGTCACAGAGGCCATGGAGTTTGGTCTTATAGATGGCATTTTAGAAACCGAGTATTGA

Protein sequence

MVAAAISPYFTCSPISSQSTKTSPFPFLYQNRSSKKSIVSVLSSPSSNYSSLSGLSSKSIGLPLKPDQFGQHNTTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAFTGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo10916	Spo10916	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo10916.1	Spo10916.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10916.1.exon.1	Spo10916.1.exon.1	exon
Spo10916.1.exon.2	Spo10916.1.exon.2	exon
Spo10916.1.exon.3	Spo10916.1.exon.3	exon
Spo10916.1.exon.4	Spo10916.1.exon.4	exon
Spo10916.1.exon.5	Spo10916.1.exon.5	exon
Spo10916.1.exon.6	Spo10916.1.exon.6	exon
Spo10916.1.exon.7	Spo10916.1.exon.7	exon
Spo10916.1.exon.8	Spo10916.1.exon.8	exon
Spo10916.1.exon.9	Spo10916.1.exon.9	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10916.1.utr5p.1	Spo10916.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10916.1.CDS.1	Spo10916.1.CDS.1	CDS
Spo10916.1.CDS.2	Spo10916.1.CDS.2	CDS
Spo10916.1.CDS.3	Spo10916.1.CDS.3	CDS
Spo10916.1.CDS.4	Spo10916.1.CDS.4	CDS
Spo10916.1.CDS.5	Spo10916.1.CDS.5	CDS
Spo10916.1.CDS.6	Spo10916.1.CDS.6	CDS
Spo10916.1.CDS.7	Spo10916.1.CDS.7	CDS
Spo10916.1.CDS.8	Spo10916.1.CDS.8	CDS
Spo10916.1.CDS.9	Spo10916.1.CDS.9	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10916.1.utr3p.1	Spo10916.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo10916.1 vs. NCBI nr
Match: gi|902148285|gb|KNA05219.1| (hypothetical protein SOVF_192410 [Spinacia oleracea])

HSP 1 Score: 541.6 bits (1394), Expect = 8.100e-151
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 1


		  
Query: 1   MVAAAISPYFTCSPISSQSTKTSPFPFLYQNRSSKKSIVSVLSSPSSNYSSLSGLSSKSI 60
           MVAAAISPYFTCSPISSQSTKTSPFPFLYQNRSSKKSIVSVLSSPSSNYSSLSGLSSKSI
Sbjct: 1   MVAAAISPYFTCSPISSQSTKTSPFPFLYQNRSSKKSIVSVLSSPSSNYSSLSGLSSKSI 60

Query: 61  GLPLKPDQFGQHNTTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPVN 120
           GLPLKPDQFGQHNTTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPVN
Sbjct: 61  GLPLKPDQFGQHNTTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPVN 120

Query: 121 SQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAA 180
           SQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAA
Sbjct: 121 SQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAA 180

Query: 181 SQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAF 240
           SQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAF
Sbjct: 181 SQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAF 240

Query: 241 TGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY 278
           TGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY
Sbjct: 241 TGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY 277

[Close]

BLAST of Spo10916.1 vs. NCBI nr
Match: gi|731358735|ref|XP_010690908.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 461.8 bits (1187), Expect = 8.200e-127
Identity = 237/277 (85.56%), Postives = 256/277 (92.42%), Query Frame = 1


		  
Query: 1   MVAAAISPYFTCSPISSQSTKTSPFPFLYQNRSSKKSIVSVLSSPSSNYSSLSGLSSKSI 60
           MVA+ I  YF    I+SQ TK SPF  +   RSS KSIVSVLS+PS++YSSL+GLSSKSI
Sbjct: 1   MVASTIFTYFASPSITSQPTKISPFASI-SKRSSNKSIVSVLSNPSNDYSSLAGLSSKSI 60

Query: 61  GLPLKPDQFGQHNTTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPVN 120
           GLPLK D  GQ+N+ LSNGPIEARKGNPPVMPAV+TPAGP DLSSVLFRNRIIFIGQPVN
Sbjct: 61  GLPLKLDLPGQYNSNLSNGPIEARKGNPPVMPAVLTPAGPLDLSSVLFRNRIIFIGQPVN 120

Query: 121 SQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAA 180
           SQVAQRVI+QLVTLA +DENSDILIYLNCPGGSTYSVLAIYDCM+WIKPKVGTVCFGVAA
Sbjct: 121 SQVAQRVITQLVTLAAVDENSDILIYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA 180

Query: 181 SQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAF 240
           SQGALLLAGGEKGMRYAMPN+R+MIHQPQSGCGGHVEDVRRQVNEAVQ+RHKIDQMYA+F
Sbjct: 181 SQGALLLAGGEKGMRYAMPNTRIMIHQPQSGCGGHVEDVRRQVNEAVQTRHKIDQMYASF 240

Query: 241 TGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY 278
           TGQ+LEKVQQYTERDRFLSVTEAMEFGL+DGILETEY
Sbjct: 241 TGQTLEKVQQYTERDRFLSVTEAMEFGLVDGILETEY 276

[Close]

BLAST of Spo10916.1 vs. NCBI nr
Match: gi|747067036|ref|XP_011080217.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like [Sesamum indicum])

HSP 1 Score: 405.2 bits (1040), Expect = 9.100e-110
Identity = 213/277 (76.90%), Postives = 235/277 (84.84%), Query Frame = 1


		  
Query: 1   MVAAAISPYFTCSPISSQSTKTSPFPFLYQNRSSKKSIVSVLSSPSSNYSSLSGLSSKSI 60
           MV +A++   + S  +S   K S FP   Q   + + ++S LSS S   SSL G SS+  
Sbjct: 1   MVTSAMATSLSLST-ASPGYKVSSFPLFPQRNLTLRPVISALSS-SYGDSSLIGFSSRRS 60

Query: 61  GLPLKPDQFGQHNTTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPVN 120
            LPLK D  G   +  SNG IEA+KGNPP+MPAVMTP GP DLS+VLFRNRIIFIGQP+N
Sbjct: 61  RLPLKHDHQGDFYSNPSNGVIEAKKGNPPIMPAVMTPGGPLDLSTVLFRNRIIFIGQPIN 120

Query: 121 SQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAA 180
           SQVAQRVISQLVTLATIDE SDIL+YLNCPGGSTYSVLAIYDCM+WIKPKVGTVCFGVAA
Sbjct: 121 SQVAQRVISQLVTLATIDEESDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA 180

Query: 181 SQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAF 240
           SQGALLLAGGEKGMRYAMPN+R+MIHQPQSGCGGHVEDVRRQVNEAVQSRHKID+MYAAF
Sbjct: 181 SQGALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAF 240

Query: 241 TGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY 278
           TGQSLEKVQQYTERDRFLSV+EAMEFGLIDG+LETEY
Sbjct: 241 TGQSLEKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 275

[Close]

BLAST of Spo10916.1 vs. NCBI nr
Match: gi|590687760|ref|XP_007042756.1| (CLP protease proteolytic subunit 6 isoform 1 [Theobroma cacao])

HSP 1 Score: 402.5 bits (1033), Expect = 5.900e-109
Identity = 211/277 (76.17%), Postives = 241/277 (87.00%), Query Frame = 1


		  
Query: 1   MVAAAISPYFTCSPISSQSTKTSPFPFLYQNRSSKKSIVSVLSSPSSNYSSLSGLSSKSI 60
           MVA+AIS   + S ++S++  T    F    R+S + IVS L SP  + SS  GLSS + 
Sbjct: 1   MVASAISASLSLS-LASRARPTCITSF--SPRNSTRLIVSALPSPYGD-SSTMGLSSSTS 60

Query: 61  GLPLKPDQFGQHNTTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPVN 120
           GLPLK D+   H++ LS G +EA+KGNPPVMPAVMTP GP DLS+VLFRNRIIFIGQP+N
Sbjct: 61  GLPLKIDKKALHDSNLSYGAVEAKKGNPPVMPAVMTPGGPLDLSTVLFRNRIIFIGQPIN 120

Query: 121 SQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAA 180
           S+VAQRVISQLVTLA+IDE++DIL+YLNCPGGSTYSVLAIYDCM+WIKPKVGTVCFGVAA
Sbjct: 121 SEVAQRVISQLVTLASIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA 180

Query: 181 SQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAF 240
           SQGALLLAGGEKGMRYAMPN+R+MIHQPQSGCGGHVEDVRRQVNEAVQSRHKID+MYA F
Sbjct: 181 SQGALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAVF 240

Query: 241 TGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY 278
           TGQ++EKVQQYTERDRFLSV+EAMEFGLIDG+LETEY
Sbjct: 241 TGQTIEKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 273

[Close]

BLAST of Spo10916.1 vs. NCBI nr
Match: gi|823255865|ref|XP_012460593.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like isoform X3 [Gossypium raimondii])

HSP 1 Score: 401.0 bits (1029), Expect = 1.700e-108
Identity = 212/277 (76.53%), Postives = 236/277 (85.20%), Query Frame = 1


		  
Query: 1   MVAAAISPYFTCSPISSQSTKTSPFPFLYQNRSSKKSIVSVLSSPSSNYSSLSGLSSKSI 60
           MVA+A+S   + S  S     +   P    +RSS + I+S L +P  + SS  GLSS+  
Sbjct: 1   MVASAVSSSLSLSLYSRTRPTSISSP---SSRSSTRLIISALPTPYGD-SSTMGLSSRVS 60

Query: 61  GLPLKPDQFGQHNTTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPVN 120
           GLPLK D+ G  ++ LS G IEA+KGNPPVMPAVMTP GP DLS+VLFRNRIIFIGQPVN
Sbjct: 61  GLPLKIDKKGFGDSDLSYGAIEAKKGNPPVMPAVMTPGGPLDLSTVLFRNRIIFIGQPVN 120

Query: 121 SQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAA 180
           SQVAQRVI+QLVTLA IDEN+DIL+YLNCPGGSTYSVLAIYDCM+WIKPKVGTVCFGVAA
Sbjct: 121 SQVAQRVITQLVTLAAIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA 180

Query: 181 SQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAF 240
           SQGALLLAGGEKGMRYAMPN+R+MIHQPQSGCGGHVEDVRRQVNEAVQSRHKID+MYAAF
Sbjct: 181 SQGALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAF 240

Query: 241 TGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY 278
           T Q LEKVQQYTERDRFLSV+EAMEFGLIDG+LETEY
Sbjct: 241 TSQPLEKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 273

[Close]

BLAST of Spo10916.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QD65_SPIOL (ATP-dependent Clp protease proteolytic subunit OS=Spinacia oleracea GN=SOVF_192410 PE=3 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 5.700e-151
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 1


		  
Query: 1   MVAAAISPYFTCSPISSQSTKTSPFPFLYQNRSSKKSIVSVLSSPSSNYSSLSGLSSKSI 60
           MVAAAISPYFTCSPISSQSTKTSPFPFLYQNRSSKKSIVSVLSSPSSNYSSLSGLSSKSI
Sbjct: 1   MVAAAISPYFTCSPISSQSTKTSPFPFLYQNRSSKKSIVSVLSSPSSNYSSLSGLSSKSI 60

Query: 61  GLPLKPDQFGQHNTTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPVN 120
           GLPLKPDQFGQHNTTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPVN
Sbjct: 61  GLPLKPDQFGQHNTTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPVN 120

Query: 121 SQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAA 180
           SQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAA
Sbjct: 121 SQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAA 180

Query: 181 SQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAF 240
           SQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAF
Sbjct: 181 SQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAF 240

Query: 241 TGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY 278
           TGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY
Sbjct: 241 TGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY 277

[Close]

BLAST of Spo10916.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EBR0_BETVU (ATP-dependent Clp protease proteolytic subunit OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g217670 PE=3 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 5.700e-127
Identity = 237/277 (85.56%), Postives = 256/277 (92.42%), Query Frame = 1


		  
Query: 1   MVAAAISPYFTCSPISSQSTKTSPFPFLYQNRSSKKSIVSVLSSPSSNYSSLSGLSSKSI 60
           MVA+ I  YF    I+SQ TK SPF  +   RSS KSIVSVLS+PS++YSSL+GLSSKSI
Sbjct: 1   MVASTIFTYFASPSITSQPTKISPFASI-SKRSSNKSIVSVLSNPSNDYSSLAGLSSKSI 60

Query: 61  GLPLKPDQFGQHNTTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPVN 120
           GLPLK D  GQ+N+ LSNGPIEARKGNPPVMPAV+TPAGP DLSSVLFRNRIIFIGQPVN
Sbjct: 61  GLPLKLDLPGQYNSNLSNGPIEARKGNPPVMPAVLTPAGPLDLSSVLFRNRIIFIGQPVN 120

Query: 121 SQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAA 180
           SQVAQRVI+QLVTLA +DENSDILIYLNCPGGSTYSVLAIYDCM+WIKPKVGTVCFGVAA
Sbjct: 121 SQVAQRVITQLVTLAAVDENSDILIYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA 180

Query: 181 SQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAF 240
           SQGALLLAGGEKGMRYAMPN+R+MIHQPQSGCGGHVEDVRRQVNEAVQ+RHKIDQMYA+F
Sbjct: 181 SQGALLLAGGEKGMRYAMPNTRIMIHQPQSGCGGHVEDVRRQVNEAVQTRHKIDQMYASF 240

Query: 241 TGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY 278
           TGQ+LEKVQQYTERDRFLSVTEAMEFGL+DGILETEY
Sbjct: 241 TGQTLEKVQQYTERDRFLSVTEAMEFGLVDGILETEY 276

[Close]

BLAST of Spo10916.1 vs. UniProtKB/TrEMBL
Match: A0A061E1T2_THECC (ATP-dependent Clp protease proteolytic subunit OS=Theobroma cacao GN=TCM_007305 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 4.100e-109
Identity = 211/277 (76.17%), Postives = 241/277 (87.00%), Query Frame = 1


		  
Query: 1   MVAAAISPYFTCSPISSQSTKTSPFPFLYQNRSSKKSIVSVLSSPSSNYSSLSGLSSKSI 60
           MVA+AIS   + S ++S++  T    F    R+S + IVS L SP  + SS  GLSS + 
Sbjct: 1   MVASAISASLSLS-LASRARPTCITSF--SPRNSTRLIVSALPSPYGD-SSTMGLSSSTS 60

Query: 61  GLPLKPDQFGQHNTTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPVN 120
           GLPLK D+   H++ LS G +EA+KGNPPVMPAVMTP GP DLS+VLFRNRIIFIGQP+N
Sbjct: 61  GLPLKIDKKALHDSNLSYGAVEAKKGNPPVMPAVMTPGGPLDLSTVLFRNRIIFIGQPIN 120

Query: 121 SQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAA 180
           S+VAQRVISQLVTLA+IDE++DIL+YLNCPGGSTYSVLAIYDCM+WIKPKVGTVCFGVAA
Sbjct: 121 SEVAQRVISQLVTLASIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA 180

Query: 181 SQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAF 240
           SQGALLLAGGEKGMRYAMPN+R+MIHQPQSGCGGHVEDVRRQVNEAVQSRHKID+MYA F
Sbjct: 181 SQGALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAVF 240

Query: 241 TGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY 278
           TGQ++EKVQQYTERDRFLSV+EAMEFGLIDG+LETEY
Sbjct: 241 TGQTIEKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 273

[Close]

BLAST of Spo10916.1 vs. UniProtKB/TrEMBL
Match: A0A0D2V5E5_GOSRA (ATP-dependent Clp protease proteolytic subunit OS=Gossypium raimondii GN=B456_012G145900 PE=3 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.200e-108
Identity = 212/277 (76.53%), Postives = 236/277 (85.20%), Query Frame = 1


		  
Query: 1   MVAAAISPYFTCSPISSQSTKTSPFPFLYQNRSSKKSIVSVLSSPSSNYSSLSGLSSKSI 60
           MVA+A+S   + S  S     +   P    +RSS + I+S L +P  + SS  GLSS+  
Sbjct: 1   MVASAVSSSLSLSLYSRTRPTSISSP---SSRSSTRLIISALPTPYGD-SSTMGLSSRVS 60

Query: 61  GLPLKPDQFGQHNTTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPVN 120
           GLPLK D+ G  ++ LS G IEA+KGNPPVMPAVMTP GP DLS+VLFRNRIIFIGQPVN
Sbjct: 61  GLPLKIDKKGFGDSDLSYGAIEAKKGNPPVMPAVMTPGGPLDLSTVLFRNRIIFIGQPVN 120

Query: 121 SQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAA 180
           SQVAQRVI+QLVTLA IDEN+DIL+YLNCPGGSTYSVLAIYDCM+WIKPKVGTVCFGVAA
Sbjct: 121 SQVAQRVITQLVTLAAIDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA 180

Query: 181 SQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAF 240
           SQGALLLAGGEKGMRYAMPN+R+MIHQPQSGCGGHVEDVRRQVNEAVQSRHKID+MYAAF
Sbjct: 181 SQGALLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAF 240

Query: 241 TGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY 278
           T Q LEKVQQYTERDRFLSV+EAMEFGLIDG+LETEY
Sbjct: 241 TSQPLEKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 273

[Close]

BLAST of Spo10916.1 vs. UniProtKB/TrEMBL
Match: A0A0D2VZG1_GOSRA (ATP-dependent Clp protease proteolytic subunit OS=Gossypium raimondii GN=B456_012G145900 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 3.500e-108
Identity = 205/258 (79.46%), Postives = 227/258 (87.98%), Query Frame = 1


		  
Query: 20  TKTSPFPFLYQNRSSKKSIVSVLSSPSSNYSSLSGLSSKSIGLPLKPDQFGQHNTTLSNG 79
           ++T P      + SS + I+S L +P  + SS  GLSS+  GLPLK D+ G  ++ LS G
Sbjct: 16  SRTRPTSISSPSSSSTRLIISALPTPYGD-SSTMGLSSRVSGLPLKIDKKGFGDSDLSYG 75

Query: 80  PIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDE 139
            IEA+KGNPPVMPAVMTP GP DLS+VLFRNRIIFIGQPVNSQVAQRVI+QLVTLA IDE
Sbjct: 76  AIEAKKGNPPVMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNSQVAQRVITQLVTLAAIDE 135

Query: 140 NSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMP 199
           N+DIL+YLNCPGGSTYSVLAIYDCM+WIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMP
Sbjct: 136 NADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMP 195

Query: 200 NSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAFTGQSLEKVQQYTERDRFLS 259
           N+R+MIHQPQSGCGGHVEDVRRQVNEAVQSRHKID+MYAAFT Q LEKVQQYTERDRFLS
Sbjct: 196 NARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTSQPLEKVQQYTERDRFLS 255

Query: 260 VTEAMEFGLIDGILETEY 278
           V+EAMEFGLIDG+LETEY
Sbjct: 256 VSEAMEFGLIDGVLETEY 272

[Close]

BLAST of Spo10916.1 vs. ExPASy Swiss-Prot
Match: CLPP6_ARATH (ATP-dependent Clp protease proteolytic subunit 6, chloroplastic OS=Arabidopsis thaliana GN=CLPP6 PE=1 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 1.100e-102
Identity = 203/278 (73.02%), Postives = 227/278 (81.65%), Query Frame = 1


		  
Query: 1   MVAAAISPYFTCSPISSQSTKTSPFPFLYQN-RSSKKSIVSVLSSPSSNYSSLSGLSSKS 60
           M   AISP    S  SS++    P  FL  N R+  + IVS L SP  + S  +GLSS  
Sbjct: 1   MAGLAISPPLGLS-FSSRTRNPKPTSFLSHNQRNPIRRIVSALQSPYGD-SLKAGLSSNV 60

Query: 61  IGLPLKPDQFGQHNTTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPV 120
            G P+K D     N     G IEA+KGNPPVMP+VMTP GP DLSSVLFRNRIIFIGQP+
Sbjct: 61  SGSPIKID-----NKAPRFGVIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPI 120

Query: 121 NSQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVA 180
           N+QVAQRVISQLVTLA+ID+ SDIL+YLNCPGGSTYSVLAIYDCM+WIKPKVGTV FGVA
Sbjct: 121 NAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVA 180

Query: 181 ASQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAA 240
           ASQGALLLAGGEKGMRYAMPN+RVMIHQPQ+GCGGHVEDVRRQVNEA+++R KID+MYAA
Sbjct: 181 ASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAA 240

Query: 241 FTGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY 278
           FTGQ LEKVQQYTERDRFLS +EA+EFGLIDG+LETEY
Sbjct: 241 FTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLETEY 271

[Close]

BLAST of Spo10916.1 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNY3 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 7.300e-43
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 1


		  
Query: 80  PIEARKGN--PPVMPAVMTPAG----PFDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVT 139
           P+    GN    V+P V+  +G     FD+ S L R RIIF+G PV+ QVA  +++QL+ 
Sbjct: 11  PLSTLGGNNIQSVVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPVDDQVADSIVAQLLF 70

Query: 140 LATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAASQGALLLAGGEKG 199
           L   D   DI +Y+N PGGS Y+ LAIYD M  I+P V T+CFG+AAS GA LL+GG KG
Sbjct: 71  LDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGCKG 130

Query: 200 MRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAFTGQSLEKVQQYTE 259
            R A+P+SR+MIHQP  G  G   ++  Q  E +  + +++ M    TGQ +EK+Q+ TE
Sbjct: 131 KRMALPSSRIMIHQPLGGAQGQAVEIEIQAREILYIKDRLNTMLVEHTGQPMEKLQEDTE 190

Query: 260 RDRFLSVTEAMEFGLIDGIL 274
           RD F+S  EA E+GLID ++
Sbjct: 191 RDFFMSAEEAKEYGLIDQVI 210

[Close]

BLAST of Spo10916.1 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMA (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.100e-42
Identity = 88/192 (45.83%), Postives = 124/192 (64.58%), Query Frame = 1


		  
Query: 88  PPVMPAVMTPAG----PFDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDENSDI 147
           P V+P V+  +G     FD+ S L R RIIF+G  VN Q+A  +++Q++ L   D   DI
Sbjct: 23  PGVLPTVIEQSGRGERAFDIYSRLLRERIIFLGTDVNDQIADALVAQMLFLEAEDPEKDI 82

Query: 148 LIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRV 207
            +Y+N PGGS  + LAIYD M  + P + T+C+G+AAS GA LLAGG KG R A+PNSR+
Sbjct: 83  QLYINSPGGSVTAGLAIYDTMQQVNPDIVTMCYGLAASMGAFLLAGGSKGKRLALPNSRI 142

Query: 208 MIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAFTGQSLEKVQQYTERDRFLSVTEA 267
           MIHQP  G  G   ++  Q  E +  +  ++ + A  TGQSLEK+ + T+RD FLS  EA
Sbjct: 143 MIHQPLGGAQGQAVEIEIQAKEILFLKETLNNLLAEHTGQSLEKISEDTDRDHFLSPQEA 202

Query: 268 MEFGLIDGILET 276
           +E+GLID ++ +
Sbjct: 203 VEYGLIDKVVNS 214

[Close]

BLAST of Spo10916.1 vs. ExPASy Swiss-Prot
Match: CLPP_CHLTE (ATP-dependent Clp protease proteolytic subunit OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) GN=clpP PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.600e-42
Identity = 92/210 (43.81%), Postives = 129/210 (61.43%), Query Frame = 1


		  
Query: 69  FGQHNTTLSNGPIEARKGNPPVMPAVMTPAG----PFDLSSVLFRNRIIFIGQPVNSQVA 128
           F  H   L +G IE    N  ++P V+  +G     FD+ S L R RIIF+G P++  VA
Sbjct: 8   FDHHAKKLYSGAIE-NSINSQLVPMVIETSGRGERAFDIFSRLLRERIIFLGSPIDEHVA 67

Query: 129 QRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAASQGA 188
             +I+QL+ L + D   DI IY+N PGGS  + L IYD M +I+P + TVC G+AAS GA
Sbjct: 68  GLIIAQLIFLESEDPERDIYIYINSPGGSVSAGLGIYDTMQYIRPDISTVCVGMAASMGA 127

Query: 189 LLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAFTGQS 248
            LLA G  G R ++P+SR+MIHQP  G  G   D+  Q  E  + RH ++ + A  TGQ 
Sbjct: 128 FLLASGTSGKRASLPHSRIMIHQPSGGAQGQETDILIQAREIEKIRHLLEDLLAKHTGQE 187

Query: 249 LEKVQQYTERDRFLSVTEAMEFGLIDGILE 275
           + ++++ +ERDR++S  EA E+GLID I E
Sbjct: 188 VSRIREDSERDRWMSAVEAKEYGLIDQIFE 216

[Close]

BLAST of Spo10916.1 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMP (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 6.200e-42
Identity = 90/190 (47.37%), Postives = 123/190 (64.74%), Query Frame = 1


		  
Query: 91  MPAVMTPAG----PFDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDENSDILIY 150
           +P V+  +G     FD+ S L R RIIF+G  +N QV+  +++QL+ L   D + DI IY
Sbjct: 25  VPTVVEQSGRGERAFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPHKDIQIY 84

Query: 151 LNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRVMIH 210
           +N PGGS  + LAIYD M  I P V T+CFGVAAS GA LL+GG KG R A+PNSR+MIH
Sbjct: 85  INSPGGSVTAGLAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMIH 144

Query: 211 QPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAFTGQSLEKVQQYTERDRFLSVTEAMEF 270
           QP  G  G   ++  Q  E +  +  ++ + A  T QSLEK+ + TERD FLS  EA+E+
Sbjct: 145 QPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAKHTNQSLEKINEDTERDYFLSPEEAVEY 204

Query: 271 GLIDGILETE 277
           GLID +++ +
Sbjct: 205 GLIDKVIKND 214

[Close]

BLAST of Spo10916.1 vs. TAIR (Arabidopsis)
Match: AT1G11750.2 (CLP protease proteolytic subunit 6)

HSP 1 Score: 370.2 bits (949), Expect = 1.100e-102
Identity = 203/291 (69.76%), Postives = 228/291 (78.35%), Query Frame = 1


		  
Query: 1   MVAAAISPYFTCSPISSQSTKTSPFPFLYQN-RSSKKSIVSVLSSPSSNYSSLSGLSSKS 60
           M   AISP    S  SS++    P  FL  N R+  + IVS L SP  + S  +GLSS  
Sbjct: 1   MAGLAISPPLGLS-FSSRTRNPKPTSFLSHNQRNPIRRIVSALQSPYGD-SLKAGLSSNV 60

Query: 61  IGLPLKPDQFGQHNTTLSN-------------GPIEARKGNPPVMPAVMTPAGPFDLSSV 120
            G P+K D     +  L               G IEA+KGNPPVMP+VMTP GP DLSSV
Sbjct: 61  SGSPIKIDNKAPSSLPLPILNILKSSTVYFIFGVIEAKKGNPPVMPSVMTPGGPLDLSSV 120

Query: 121 LFRNRIIFIGQPVNSQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAW 180
           LFRNRIIFIGQP+N+QVAQRVISQLVTLA+ID+ SDIL+YLNCPGGSTYSVLAIYDCM+W
Sbjct: 121 LFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAIYDCMSW 180

Query: 181 IKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEA 240
           IKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+RVMIHQPQ+GCGGHVEDVRRQVNEA
Sbjct: 181 IKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEA 240

Query: 241 VQSRHKIDQMYAAFTGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILETEY 278
           +++R KID+MYAAFTGQ LEKVQQYTERDRFLS +EA+EFGLIDG+LETEY
Sbjct: 241 IEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLETEY 289

[Close]

BLAST of Spo10916.1 vs. TAIR (Arabidopsis)
Match: AT1G02560.1 (nuclear encoded CLP protease 5)

HSP 1 Score: 161.0 bits (406), Expect = 1.100e-39
Identity = 86/193 (44.56%), Postives = 118/193 (61.14%), Query Frame = 1


		  
Query: 89  PVMPAVMTPAGP--------FDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDEN 148
           P  PA     GP          + S LF+ RII  G  V+  +A  +++QL+ L  +D  
Sbjct: 93  PYFPAYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPT 152

Query: 149 SDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPN 208
            DI++Y+N PGGS  + +AI+D M  I+P V TVC G+AAS GA LL+ G KG RY++PN
Sbjct: 153 KDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 212

Query: 209 SRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAFTGQSLEKVQQYTERDRFLSV 268
           SR+MIHQP  G  G   D+  Q NE +  +  ++   A  TGQSLEK+ Q T+RD F+S 
Sbjct: 213 SRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSA 272

Query: 269 TEAMEFGLIDGIL 274
            EA E+GLIDG++
Sbjct: 273 KEAKEYGLIDGVI 285

[Close]

BLAST of Spo10916.1 vs. TAIR (Arabidopsis)
Match: AT1G66670.1 (CLP protease proteolytic subunit 3)

HSP 1 Score: 155.6 bits (392), Expect = 4.400e-38
Identity = 83/216 (38.43%), Postives = 127/216 (58.80%), Query Frame = 1


		  
Query: 59  SIGLPLKPDQFGQHNTTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQP 118
           S+ L   P Q    N  +S+  I++   +P  +P+        D +++L R RI+F+G  
Sbjct: 46  SMSLSKPPRQTLSSNWDVSSFSIDSVAQSPSRLPSFEE----LDTTNMLLRQRIVFLGSQ 105

Query: 119 VNSQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGV 178
           V+   A  VISQL+ L   D   DI +++N PGGS  + + IYD M   K  V TVC G+
Sbjct: 106 VDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGL 165

Query: 179 AASQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYA 238
           AAS GA LLA G KG RY MPNS+VMIHQP    GG   ++  ++ E +  + K++++++
Sbjct: 166 AASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIREMMYHKIKLNKIFS 225

Query: 239 AFTGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILE 275
             TG+   +++  T+RD FL+  EA E+GLID +++
Sbjct: 226 RITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVID 257

[Close]

BLAST of Spo10916.1 vs. TAIR (Arabidopsis)
Match: AT5G45390.1 (CLP protease P4)

HSP 1 Score: 147.5 bits (371), Expect = 1.200e-35
Identity = 89/261 (34.10%), Postives = 140/261 (53.64%), Query Frame = 1


		  
Query: 19  STKTSPFPFLYQNRSSKKSIVSVLSSPSSNYSSLSGLSSKSIGLPLK-----PDQFGQHN 78
           S  +S  P L  +R +  S  S  S P  N   L    +K I  PL+     P +F   +
Sbjct: 5   SLSSSLKPSLVSSRLNSSSSASSSSFPKPNNLYLK--PTKLISPPLRTTSPSPLRFANAS 64

Query: 79  TTLSNGPIEARKGNPPVMPAVMTPAGPFDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVT 138
             +S     A +G               D+  +L R RI+F+G  ++  VA  ++SQL+ 
Sbjct: 65  IEMSQTQESAIRG------------AESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLL 124

Query: 139 LATIDENSDILIYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAASQGALLLAGGEKG 198
           L   D   DI +++N PGGS  + +AIYD +  ++  V T+  G+AAS  +++L  G KG
Sbjct: 125 LDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKG 184

Query: 199 MRYAMPNSRVMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAFTGQSLEKVQQYTE 258
            R+AMPN+R+MIHQP  G  G   DV  Q  E + +++ +  + A  T +S E+V +  +
Sbjct: 185 KRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDID 244

Query: 259 RDRFLSVTEAMEFGLIDGILE 275
           RDR++S  EA+E+GLIDG+++
Sbjct: 245 RDRYMSPIEAVEYGLIDGVID 251

[Close]

BLAST of Spo10916.1 vs. TAIR (Arabidopsis)
Match: AT5G23140.1 (nuclear-encoded CLP protease P7)

HSP 1 Score: 137.5 bits (345), Expect = 1.200e-32
Identity = 68/174 (39.08%), Postives = 105/174 (60.34%), Query Frame = 1


		  
Query: 101 FDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDENSDILIYLNCPGGSTYSVLAI 160
           +D+ S L + RII I  P+N   +  V++QL+ L + + +  I +YLN PGG   + LAI
Sbjct: 47  YDIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAI 106

Query: 161 YDCMAWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRVMIHQPQSGCGGHVEDVR 220
           YD M +I+  + T+C G AAS  +LLLA G KG R ++PN+ VMIHQP  G  G  +D+ 
Sbjct: 107 YDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDIT 166

Query: 221 RQVNEAVQSRHKIDQMYAAFTGQSLEKVQQYTERDRFLSVTEAMEFGLIDGILE 275
               + V+    ++++Y   TGQ L+ V    +RD F++  EA  FG+ID +++
Sbjct: 167 IHTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVID 220

The following BLAST results are available for this feature:

BLAST of Spo10916.1 vs. NCBI nr
BLAST of Spo10916.1 vs. UniProtKB/TrEMBL
BLAST of Spo10916.1 vs. ExPASy Swiss-Prot
BLAST of Spo10916.1 vs. TAIR (Arabidopsis)

BLAST of Spo10916.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902148285\|gb\|KNA05219.1\|	8.1e-151	100.	hypothetical protein SOVF_1924...	[more]
gi\|731358735\|ref\|XP_010690908.1\|	8.2e-127	85.5	PREDICTED: ATP-dependent Clp p...	[more]
gi\|747067036\|ref\|XP_011080217.1\|	9.1e-110	76.9	PREDICTED: ATP-dependent Clp p...	[more]
gi\|590687760\|ref\|XP_007042756.1\|	5.9e-109	76.1	CLP protease proteolytic subun...	[more]
gi\|823255865\|ref\|XP_012460593.1\|	1.7e-108	76.5	PREDICTED: ATP-dependent Clp p...	[more]

BLAST of Spo10916.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QD65_SPIOL	5.7e-151	100.	ATP-dependent Clp protease pro...	[more]
A0A0J8EBR0_BETVU	5.7e-127	85.5	ATP-dependent Clp protease pro...	[more]
A0A061E1T2_THECC	4.1e-109	76.1	ATP-dependent Clp protease pro...	[more]
A0A0D2V5E5_GOSRA	1.2e-108	76.5	ATP-dependent Clp protease pro...	[more]
A0A0D2VZG1_GOSRA	3.5e-108	79.4	ATP-dependent Clp protease pro...	[more]

BLAST of Spo10916.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CLPP6_ARATH	1.1e-102	73.0	ATP-dependent Clp protease pro...	[more]
CLPP2_SYNY3	7.3e-43	46.5	ATP-dependent Clp protease pro...	[more]
CLPP3_PROMA	2.1e-42	45.8	ATP-dependent Clp protease pro...	[more]
CLPP_CHLTE	3.6e-42	43.8	ATP-dependent Clp protease pro...	[more]
CLPP3_PROMP	6.2e-42	47.3	ATP-dependent Clp protease pro...	[more]

BLAST of Spo10916.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G11750.2	1.1e-102	69.7	CLP protease proteolytic subun...	[more]
AT1G02560.1	1.1e-39	44.5	nuclear encoded CLP protease 5	[more]
AT1G66670.1	4.4e-38	38.4	CLP protease proteolytic subun...	[more]
AT5G45390.1	1.2e-35	34.1	CLP protease P4	[more]
AT5G23140.1	1.2e-32	39.0	nuclear-encoded CLP protease P...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 173..190 score: 5.3E-43coord: 251..270 score: 5.3E-43coord: 142..162 score: 5.3E-43coord: 194..213 score: 5.3E-43coord: 102..117 score: 5.3
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 90..276 score: 33
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 32..277 score: 1.5E
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 102..275 score: 7.7
None	No IPR available	PANTHER	PTHR10381:SF8	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 6, CHLOROPLASTIC	coord: 32..277 score: 1.5E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004252	serine-type endopeptidase activity