Spo11235.1 (mRNA) | SpinachBase

Overview


Name	Spo11235.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	YGGT family protein
Location	SpoScf_01979 : 4749 .. 5456 (+)
Sequence length	708

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACAATAACAGCTTCTTCTCAATCACTCTTCCTCCTTAGCCCTAAAATACTTTCTCTCTCCACCGCACTAACCACCAGAAAAAACCTCTCCTTCACCACCCCCATCGCAAAAACCACCGCCACCACTGGTCTTTCTCTCAGAATTAGGGCTTCTTCGTCTTCTTTATCTCCTTCTCCGACTTCGTCAATTCCATCGAATCCACTCCCCTTCGACTATTCTCTACTATCCACCTCTACTCGCACAATCACCACCCTGATCGCCACCGTCTTCGTCGTCTCGAAAGTCCTCGCCACCAAAATCAGCTCGATTTTACCCTGCCCAACCCCCGCCGAGCTCCAAAATCTTTACGCCATGAAGAAAAATCTACTAGGTTCAGTGGGTCCGTTGTTCTTCGCCGCACTGAAAGACCGCCCAAGTGGTTCTCTCAACACTCCATTAACCGTCGTTGCGGCAGGAATGGCGAAATGGCTCGACATCTACAGCGGTGTGTTGATGGTTAGGGTTTTGCTCAGTTGGTTCCCGAATATCCCTTGGGATAGACAACCATTATCAGCAATTAGGGATTTGTGTGATCCTTATCTGAATTTGTTTAGAAACATAATTCCTCCAATTTTTGACACGTTGGACGTGAGCCCACTGTTGGCTTTCGCGGTATTGGGGACTCTCGGCGCTATTTTGAGCAGCAGTCTTGGGAGTTATTGA

mRNA sequence

ATGGCGACAATAACAGCTTCTTCTCAATCACTCTTCCTCCTTAGCCCTAAAATACTTTCTCTCTCCACCGCACTAACCACCAGAAAAAACCTCTCCTTCACCACCCCCATCGCAAAAACCACCGCCACCACTGGTCTTTCTCTCAGAATTAGGGCTTCTTCGTCTTCTTTATCTCCTTCTCCGACTTCGTCAATTCCATCGAATCCACTCCCCTTCGACTATTCTCTACTATCCACCTCTACTCGCACAATCACCACCCTGATCGCCACCGTCTTCGTCGTCTCGAAAGTCCTCGCCACCAAAATCAGCTCGATTTTACCCTGCCCAACCCCCGCCGAGCTCCAAAATCTTTACGCCATGAAGAAAAATCTACTAGGTTCAGTGGGTCCGTTGTTCTTCGCCGCACTGAAAGACCGCCCAAGTGGTTCTCTCAACACTCCATTAACCGTCGTTGCGGCAGGAATGGCGAAATGGCTCGACATCTACAGCGGTGTGTTGATGGTTAGGGTTTTGCTCAGTTGGTTCCCGAATATCCCTTGGGATAGACAACCATTATCAGCAATTAGGGATTTGTGTGATCCTTATCTGAATTTGTTTAGAAACATAATTCCTCCAATTTTTGACACGTTGGACGTGAGCCCACTGTTGGCTTTCGCGGTATTGGGGACTCTCGGCGCTATTTTGAGCAGCAGTCTTGGGAGTTATTGA

Coding sequence (CDS)

ATGGCGACAATAACAGCTTCTTCTCAATCACTCTTCCTCCTTAGCCCTAAAATACTTTCTCTCTCCACCGCACTAACCACCAGAAAAAACCTCTCCTTCACCACCCCCATCGCAAAAACCACCGCCACCACTGGTCTTTCTCTCAGAATTAGGGCTTCTTCGTCTTCTTTATCTCCTTCTCCGACTTCGTCAATTCCATCGAATCCACTCCCCTTCGACTATTCTCTACTATCCACCTCTACTCGCACAATCACCACCCTGATCGCCACCGTCTTCGTCGTCTCGAAAGTCCTCGCCACCAAAATCAGCTCGATTTTACCCTGCCCAACCCCCGCCGAGCTCCAAAATCTTTACGCCATGAAGAAAAATCTACTAGGTTCAGTGGGTCCGTTGTTCTTCGCCGCACTGAAAGACCGCCCAAGTGGTTCTCTCAACACTCCATTAACCGTCGTTGCGGCAGGAATGGCGAAATGGCTCGACATCTACAGCGGTGTGTTGATGGTTAGGGTTTTGCTCAGTTGGTTCCCGAATATCCCTTGGGATAGACAACCATTATCAGCAATTAGGGATTTGTGTGATCCTTATCTGAATTTGTTTAGAAACATAATTCCTCCAATTTTTGACACGTTGGACGTGAGCCCACTGTTGGCTTTCGCGGTATTGGGGACTCTCGGCGCTATTTTGAGCAGCAGTCTTGGGAGTTATTGA

Protein sequence

MATITASSQSLFLLSPKILSLSTALTTRKNLSFTTPIAKTTATTGLSLRIRASSSSLSPSPTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSILPCPTPAELQNLYAMKKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGAILSSSLGSY

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo11235	Spo11235	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo11235.1	Spo11235.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11235.1.exon.1	Spo11235.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11235.1.CDS.1	Spo11235.1.CDS.1	CDS

Homology

[Close]

BLAST of Spo11235.1 vs. NCBI nr
Match: gi|902166738|gb|KNA07269.1| (hypothetical protein SOVF_173470 [Spinacia oleracea])

HSP 1 Score: 431.8 bits (1109), Expect = 7.700e-118
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 1


		  
Query: 1   MATITASSQSLFLLSPKILSLSTALTTRKNLSFTTPIAKTTATTGLSLRIRASSSSLSPS 60
           MATITASSQSLFLLSPKILSLSTALTTRKNLSFTTPIAKTTATTGLSLRIRASSSSLSPS
Sbjct: 1   MATITASSQSLFLLSPKILSLSTALTTRKNLSFTTPIAKTTATTGLSLRIRASSSSLSPS 60

Query: 61  PTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSILPCPTPAELQNLYAM 120
           PTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSI PCPTPAELQNLYAM
Sbjct: 61  PTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSIFPCPTPAELQNLYAM 120

Query: 121 KKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLSWFPNIPW 180
           KKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLSWFPNIPW
Sbjct: 121 KKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLSWFPNIPW 180

Query: 181 DRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGAILSSSLGSY 236
           DRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGAILSSSLGSY
Sbjct: 181 DRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGAILSSSLGSY 235

[Close]

BLAST of Spo11235.1 vs. NCBI nr
Match: gi|731325027|ref|XP_010673289.1| (PREDICTED: uncharacterized protein LOC104889701 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 271.9 bits (694), Expect = 1.000e-69
Identity = 164/238 (68.91%), Postives = 185/238 (77.73%), Query Frame = 1


		  
Query: 1   MATITASSQSLFLLSPKILSLST-ALTTRKNLSFTTPIAKTTATTGLSLRIRASSSSLSP 60
           MAT TASSQSLFLL+PK    S  ++T ++ +SF   I+         L+IR SSSS+S 
Sbjct: 1   MATFTASSQSLFLLNPKTPFFSPFSITPKRTVSFPPTISP--------LKIRVSSSSISS 60

Query: 61  SPTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSILPC------PTPAE 120
           S TSS P+  LPF+ S +STSTRTI+++ AT+  VSK+L TK  SI         PT  E
Sbjct: 61  S-TSSSPT--LPFNNSPISTSTRTISSIFATLIAVSKLLTTKFHSIATSISTSASPTLEE 120

Query: 121 LQNLYAMKKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLS 180
           LQ L ++K NLL SVGPLFFAAL DRP GSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLS
Sbjct: 121 LQKLNSLKSNLLCSVGPLFFAALTDRPRGSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLS 180

Query: 181 WFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGAILSSS 232
           WFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLLAFAVLG LG+ILSSS
Sbjct: 181 WFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGVLGSILSSS 227

[Close]

BLAST of Spo11235.1 vs. NCBI nr
Match: gi|756179896|gb|AJK93583.1| (YGGT family protein [Suaeda glauca])

HSP 1 Score: 251.5 bits (641), Expect = 1.400e-63
Identity = 154/234 (65.81%), Postives = 177/234 (75.64%), Query Frame = 1


		  
Query: 1   MATITASSQSLFLLSPKILSLSTA-LTTRKNLSFTTPIAKTTATTGLSLRIRASSSSLSP 60
           MATITASSQS  LL+PK   LS++ LT  K L F TP       + L +R+ +SS S+SP
Sbjct: 1   MATITASSQSFLLLNPKTPFLSSSSLTPPKPLFFKTP-----NFSPLKIRVSSSSPSISP 60

Query: 61  SPTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSILPCPTPAELQNLYA 120
             ++SI +       S +S+STRTITTLIAT++ +SK L +KI SI P P          
Sbjct: 61  IQSNSIKTPISIPPNSSISSSTRTITTLIATLYTISKFLLSKIVSISPNP---------- 120

Query: 121 MKKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLSWFPNIP 180
             + L+ S  PLFFAALKDRP+G LNTPLTVVAAGM+KWLDIYSGVLMVRVLLSWFPNIP
Sbjct: 121 --QTLISSSTPLFFAALKDRPTGYLNTPLTVVAAGMSKWLDIYSGVLMVRVLLSWFPNIP 180

Query: 181 WDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGAILSSSLG 234
           WDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLG+ILS+S G
Sbjct: 181 WDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILSNSSG 217

[Close]

BLAST of Spo11235.1 vs. NCBI nr
Match: gi|586726215|ref|XP_006849595.1| (PREDICTED: uncharacterized protein LOC18439366 [Amborella trichopoda])

HSP 1 Score: 230.3 bits (586), Expect = 3.400e-57
Identity = 126/196 (64.29%), Postives = 155/196 (79.08%), Query Frame = 1


		  
Query: 46  LSLRIRASSSSLSPSPTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVL------- 105
           LS R+RAS+SS S SP +   SN L    + LS STRT++ ++     +SKV        
Sbjct: 65  LSHRVRASASSAS-SPNAHTTSNSLNSSQNFLSDSTRTVSYVLGVALSLSKVFMAATQGF 124

Query: 106 ATKISSILPCPTPAELQNLYAMKKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKW 165
           A+KI ++   PTP E  +L  ++ NL+ +VGPLFFAA+K+RP+G LNTPLTVVA+GMA+W
Sbjct: 125 ASKIRALCLNPTPDEAASLRMLQDNLVCTVGPLFFAAMKNRPAGYLNTPLTVVASGMARW 184

Query: 166 LDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAF 225
           LDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPP+FDTLDVSP+LAF
Sbjct: 185 LDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPILAF 244

Query: 226 AVLGTLGAILSSSLGS 235
           AVLG+LG+IL+++ GS
Sbjct: 245 AVLGSLGSILNNTKGS 259

[Close]

BLAST of Spo11235.1 vs. NCBI nr
Match: gi|672171788|ref|XP_008805971.1| (PREDICTED: uncharacterized protein LOC103718781 [Phoenix dactylifera])

HSP 1 Score: 229.6 bits (584), Expect = 5.800e-57
Identity = 130/194 (67.01%), Postives = 152/194 (78.35%), Query Frame = 1


		  
Query: 47  SLRIRASSSSLSPSPTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSIL 106
           SL +R S  S S   +SS+ S P P   +LLS STRTI++L+A    VSK++ +  + I 
Sbjct: 46  SLHLRPSPPSKSLVVSSSLAS-PAPTSPTLLSGSTRTISSLLALALSVSKLVLSLPARIA 105

Query: 107 PC-----PTPAELQNLYAMKKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLDI 166
                  P+ AEL  +  ++ +L  +VGPLFFAALKDRPSG LNTPLTVVA+GMAKWLDI
Sbjct: 106 AAAARAAPSAAELAEIRDLRGSLACAVGPLFFAALKDRPSGYLNTPLTVVASGMAKWLDI 165

Query: 167 YSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVL 226
           YSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLLAFAVL
Sbjct: 166 YSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVL 225

Query: 227 GTLGAILSSSLGSY 236
           GTLG+IL++S G Y
Sbjct: 226 GTLGSILNNSRGMY 238

[Close]

BLAST of Spo11235.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJ40_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_173470 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 5.400e-118
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 1


		  
Query: 1   MATITASSQSLFLLSPKILSLSTALTTRKNLSFTTPIAKTTATTGLSLRIRASSSSLSPS 60
           MATITASSQSLFLLSPKILSLSTALTTRKNLSFTTPIAKTTATTGLSLRIRASSSSLSPS
Sbjct: 1   MATITASSQSLFLLSPKILSLSTALTTRKNLSFTTPIAKTTATTGLSLRIRASSSSLSPS 60

Query: 61  PTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSILPCPTPAELQNLYAM 120
           PTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSI PCPTPAELQNLYAM
Sbjct: 61  PTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSIFPCPTPAELQNLYAM 120

Query: 121 KKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLSWFPNIPW 180
           KKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLSWFPNIPW
Sbjct: 121 KKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLSWFPNIPW 180

Query: 181 DRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGAILSSSLGSY 236
           DRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGAILSSSLGSY
Sbjct: 181 DRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGAILSSSLGSY 235

[Close]

BLAST of Spo11235.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CMK7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g064850 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 7.100e-70
Identity = 164/238 (68.91%), Postives = 185/238 (77.73%), Query Frame = 1


		  
Query: 1   MATITASSQSLFLLSPKILSLST-ALTTRKNLSFTTPIAKTTATTGLSLRIRASSSSLSP 60
           MAT TASSQSLFLL+PK    S  ++T ++ +SF   I+         L+IR SSSS+S 
Sbjct: 1   MATFTASSQSLFLLNPKTPFFSPFSITPKRTVSFPPTISP--------LKIRVSSSSISS 60

Query: 61  SPTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSILPC------PTPAE 120
           S TSS P+  LPF+ S +STSTRTI+++ AT+  VSK+L TK  SI         PT  E
Sbjct: 61  S-TSSSPT--LPFNNSPISTSTRTISSIFATLIAVSKLLTTKFHSIATSISTSASPTLEE 120

Query: 121 LQNLYAMKKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLS 180
           LQ L ++K NLL SVGPLFFAAL DRP GSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLS
Sbjct: 121 LQKLNSLKSNLLCSVGPLFFAALTDRPRGSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLS 180

Query: 181 WFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGAILSSS 232
           WFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLLAFAVLG LG+ILSSS
Sbjct: 181 WFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGVLGSILSSS 227

[Close]

BLAST of Spo11235.1 vs. UniProtKB/TrEMBL
Match: A0A0C5AU66_9CARY (Suaeda glauca YGGT family protein mRNA OS=Suaeda glauca PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 9.900e-64
Identity = 154/234 (65.81%), Postives = 177/234 (75.64%), Query Frame = 1


		  
Query: 1   MATITASSQSLFLLSPKILSLSTA-LTTRKNLSFTTPIAKTTATTGLSLRIRASSSSLSP 60
           MATITASSQS  LL+PK   LS++ LT  K L F TP       + L +R+ +SS S+SP
Sbjct: 1   MATITASSQSFLLLNPKTPFLSSSSLTPPKPLFFKTP-----NFSPLKIRVSSSSPSISP 60

Query: 61  SPTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSILPCPTPAELQNLYA 120
             ++SI +       S +S+STRTITTLIAT++ +SK L +KI SI P P          
Sbjct: 61  IQSNSIKTPISIPPNSSISSSTRTITTLIATLYTISKFLLSKIVSISPNP---------- 120

Query: 121 MKKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLSWFPNIP 180
             + L+ S  PLFFAALKDRP+G LNTPLTVVAAGM+KWLDIYSGVLMVRVLLSWFPNIP
Sbjct: 121 --QTLISSSTPLFFAALKDRPTGYLNTPLTVVAAGMSKWLDIYSGVLMVRVLLSWFPNIP 180

Query: 181 WDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGAILSSSLG 234
           WDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLG+ILS+S G
Sbjct: 181 WDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGSILSNSSG 217

[Close]

BLAST of Spo11235.1 vs. UniProtKB/TrEMBL
Match: W1PU27_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00024p00200150 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.400e-57
Identity = 126/196 (64.29%), Postives = 155/196 (79.08%), Query Frame = 1


		  
Query: 46  LSLRIRASSSSLSPSPTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVL------- 105
           LS R+RAS+SS S SP +   SN L    + LS STRT++ ++     +SKV        
Sbjct: 65  LSHRVRASASSAS-SPNAHTTSNSLNSSQNFLSDSTRTVSYVLGVALSLSKVFMAATQGF 124

Query: 106 ATKISSILPCPTPAELQNLYAMKKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKW 165
           A+KI ++   PTP E  +L  ++ NL+ +VGPLFFAA+K+RP+G LNTPLTVVA+GMA+W
Sbjct: 125 ASKIRALCLNPTPDEAASLRMLQDNLVCTVGPLFFAAMKNRPAGYLNTPLTVVASGMARW 184

Query: 166 LDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAF 225
           LDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPP+FDTLDVSP+LAF
Sbjct: 185 LDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPILAF 244

Query: 226 AVLGTLGAILSSSLGS 235
           AVLG+LG+IL+++ GS
Sbjct: 245 AVLGSLGSILNNTKGS 259

[Close]

BLAST of Spo11235.1 vs. UniProtKB/TrEMBL
Match: A0A067L9Z0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15121 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 7.600e-56
Identity = 129/195 (66.15%), Postives = 144/195 (73.85%), Query Frame = 1


		  
Query: 48  LRIRASSSSLSPSPTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSILP 107
           LR+ AS SS S   T+  PS        LL+ STRTITT++   F +S+V  T I     
Sbjct: 62  LRVLASLSSQSSQITTLSPSTE---SQPLLTGSTRTITTILTLAFSLSRVFLTSIQKFAV 121

Query: 108 CPTPAE-------LQNLYAMKKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLD 167
               A        L  +  ++ +L+ SVGPLFFA+LKDRPSG LNTPLTVVAAG+AKWLD
Sbjct: 122 SVAGASFFPNLNGLATIRGLQGDLVNSVGPLFFASLKDRPSGYLNTPLTVVAAGLAKWLD 181

Query: 168 IYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAV 227
           IYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAV
Sbjct: 182 IYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAV 241

Query: 228 LGTLGAILSSSLGSY 236
           LGTLG+IL SS G Y
Sbjct: 242 LGTLGSILHSSGGVY 253

[Close]

BLAST of Spo11235.1 vs. ExPASy Swiss-Prot
Match: YMG11_ARATH (YlmG homolog protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=YLMG1-1 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.300e-52
Identity = 116/187 (62.03%), Postives = 137/187 (73.26%), Query Frame = 1


		  
Query: 47  SLRIRASSSSLSPSPTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSIL 106
           S+RI AS+S   P  T  + +       S L+ STR++ TL A    V++VLA K+S  +
Sbjct: 53  SIRISASAS---PITTPILQTEKSTARSSTLTGSTRSLATLAALAIAVTRVLAQKLSLAI 112

Query: 107 PCPTPAELQNLYAMKKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLDIYSGVL 166
              +P     L    +  L + GP+FFA+L+DRP G LNTPLTVVA G+ KWLDIYSGVL
Sbjct: 113 QTSSPVIADGL----RFSLSTAGPVFFASLRDRPPGYLNTPLTVVAVGIKKWLDIYSGVL 172

Query: 167 MVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGA 226
           MVRVLLSWFPNIPW+RQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLG+
Sbjct: 173 MVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGS 232

Query: 227 ILSSSLG 234
           I+  S G
Sbjct: 233 IVHGSTG 232

[Close]

BLAST of Spo11235.1 vs. ExPASy Swiss-Prot
Match: YMG12_ARATH (YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=YLMG1-2 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.800e-51
Identity = 130/238 (54.62%), Postives = 159/238 (66.81%), Query Frame = 1


		  
Query: 1   MATITASSQSL---FLLSPKILS--LSTALTTRKNLSFTTPIAKTTATTGLSLRIRASSS 60
           MA+ T +S +L    L +P++    +   L+  + LSF   ++   A T +S  + +SS 
Sbjct: 1   MASFTTNSLALRASILANPRLPPPIIRPRLSLPRKLSFN--LSLHNARTIVSSAVTSSSP 60

Query: 61  SLSPSPTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSILPCPTPAELQ 120
            LS  P S  P           S STR+ITTL+    VV K L  K+S          + 
Sbjct: 61  VLSSKPPSQFP----------FSDSTRSITTLVLLAGVVIKSLIQKLS--------VAIV 120

Query: 121 NLYAMKKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLSWF 180
           NL    +    +  PLFFA+L+DRP+G LNTPLTVVAAG++KWLDIYSGVLMVRVLLSWF
Sbjct: 121 NLSPQIQASFRTASPLFFASLRDRPAGYLNTPLTVVAAGLSKWLDIYSGVLMVRVLLSWF 180

Query: 181 PNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGAILSSSLG 234
           PNIPWDRQPLSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLLAFAVLGTLG+IL++S G
Sbjct: 181 PNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILNNSRG 218

[Close]

BLAST of Spo11235.1 vs. ExPASy Swiss-Prot
Match: YLMG2_ARATH (YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana GN=YLMG2 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 9.700e-12
Identity = 36/72 (50.00%), Postives = 53/72 (73.61%), Query Frame = 1


		  
Query: 150 VVAAGMAKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDT 209
           VVA G+  +L+IY+ +L+VR++L+WFP+ P     ++ +  LCDPYLN+FR  IPP+   
Sbjct: 133 VVANGLINFLNIYNTILVVRLVLTWFPSAP--PAIVNPLSTLCDPYLNIFRGFIPPL-GG 192

Query: 210 LDVSPLLAFAVL 222
           LD+SP+LAF VL
Sbjct: 193 LDLSPILAFLVL 201

[Close]

BLAST of Spo11235.1 vs. ExPASy Swiss-Prot
Match: YCF19_GUITH (Uncharacterized protein ycf19 OS=Guillardia theta GN=ycf19 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.200e-11
Identity = 32/87 (36.78%), Postives = 56/87 (64.37%), Query Frame = 1


		  
Query: 144 LNTPLTVVAAGMAKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNII 203
           ++   T++ +    +L IY  +L++RV L+WFPN+ W  QP  ++  + DPYL +FR I+
Sbjct: 1   MSNSFTLLFSSFIGFLQIYLILLLIRVSLTWFPNVNWYGQPFYSLSRITDPYLKMFRGIV 60

Query: 204 PPIFDTLDVSPLLAFAVLGTLGAILSS 231
           PP+   +D+SP+L F +L  +  I+S+
Sbjct: 61  PPLIG-IDISPILGFILLQCIMQIVSN 86

[Close]

BLAST of Spo11235.1 vs. ExPASy Swiss-Prot
Match: YCF19_PORPU (Uncharacterized protein ycf19 OS=Porphyra purpurea GN=ycf19 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.000e-8
Identity = 28/83 (33.73%), Postives = 51/83 (61.45%), Query Frame = 1


		  
Query: 148 LTVVAAGMAKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIF 207
           L ++   +A + +IY  ++++++ L+WFP + W  +P  ++  + DPYL LFR  IPP+F
Sbjct: 8   LNLLLGSIANFSEIYLILILLKLSLAWFPTVNWYNEPFCSLNRITDPYLKLFRGSIPPMF 67

Query: 208 DTLDVSPLLAFAVLGTLGAILSS 231
             +D+SP+L    L  L  I ++
Sbjct: 68  G-MDMSPMLGIIFLQCLMVIFNN 89

[Close]

BLAST of Spo11235.1 vs. TAIR (Arabidopsis)
Match: AT3G07430.1 (YGGT family protein)

HSP 1 Score: 206.5 bits (524), Expect = 1.900e-53
Identity = 116/187 (62.03%), Postives = 137/187 (73.26%), Query Frame = 1


		  
Query: 47  SLRIRASSSSLSPSPTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSIL 106
           S+RI AS+S   P  T  + +       S L+ STR++ TL A    V++VLA K+S  +
Sbjct: 53  SIRISASAS---PITTPILQTEKSTARSSTLTGSTRSLATLAALAIAVTRVLAQKLSLAI 112

Query: 107 PCPTPAELQNLYAMKKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLDIYSGVL 166
              +P     L    +  L + GP+FFA+L+DRP G LNTPLTVVA G+ KWLDIYSGVL
Sbjct: 113 QTSSPVIADGL----RFSLSTAGPVFFASLRDRPPGYLNTPLTVVAVGIKKWLDIYSGVL 172

Query: 167 MVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGA 226
           MVRVLLSWFPNIPW+RQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLG+
Sbjct: 173 MVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGS 232

Query: 227 ILSSSLG 234
           I+  S G
Sbjct: 233 IVHGSTG 232

[Close]

BLAST of Spo11235.1 vs. TAIR (Arabidopsis)
Match: AT4G27990.1 (YGGT family protein)

HSP 1 Score: 203.4 bits (516), Expect = 1.600e-52
Identity = 130/238 (54.62%), Postives = 159/238 (66.81%), Query Frame = 1


		  
Query: 1   MATITASSQSL---FLLSPKILS--LSTALTTRKNLSFTTPIAKTTATTGLSLRIRASSS 60
           MA+ T +S +L    L +P++    +   L+  + LSF   ++   A T +S  + +SS 
Sbjct: 1   MASFTTNSLALRASILANPRLPPPIIRPRLSLPRKLSFN--LSLHNARTIVSSAVTSSSP 60

Query: 61  SLSPSPTSSIPSNPLPFDYSLLSTSTRTITTLIATVFVVSKVLATKISSILPCPTPAELQ 120
            LS  P S  P           S STR+ITTL+    VV K L  K+S          + 
Sbjct: 61  VLSSKPPSQFP----------FSDSTRSITTLVLLAGVVIKSLIQKLS--------VAIV 120

Query: 121 NLYAMKKNLLGSVGPLFFAALKDRPSGSLNTPLTVVAAGMAKWLDIYSGVLMVRVLLSWF 180
           NL    +    +  PLFFA+L+DRP+G LNTPLTVVAAG++KWLDIYSGVLMVRVLLSWF
Sbjct: 121 NLSPQIQASFRTASPLFFASLRDRPAGYLNTPLTVVAAGLSKWLDIYSGVLMVRVLLSWF 180

Query: 181 PNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDTLDVSPLLAFAVLGTLGAILSSSLG 234
           PNIPWDRQPLSAIRDLCDPYLNLFRNIIPP+FDTLDVSPLLAFAVLGTLG+IL++S G
Sbjct: 181 PNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILNNSRG 218

[Close]

BLAST of Spo11235.1 vs. TAIR (Arabidopsis)
Match: AT5G21920.1 (YGGT family protein)

HSP 1 Score: 72.0 bits (175), Expect = 5.500e-13
Identity = 36/72 (50.00%), Postives = 53/72 (73.61%), Query Frame = 1


		  
Query: 150 VVAAGMAKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPIFDT 209
           VVA G+  +L+IY+ +L+VR++L+WFP+ P     ++ +  LCDPYLN+FR  IPP+   
Sbjct: 133 VVANGLINFLNIYNTILVVRLVLTWFPSAP--PAIVNPLSTLCDPYLNIFRGFIPPL-GG 192

Query: 210 LDVSPLLAFAVL 222
           LD+SP+LAF VL
Sbjct: 193 LDLSPILAFLVL 201

The following BLAST results are available for this feature:

BLAST of Spo11235.1 vs. NCBI nr
BLAST of Spo11235.1 vs. UniProtKB/TrEMBL
BLAST of Spo11235.1 vs. ExPASy Swiss-Prot
BLAST of Spo11235.1 vs. TAIR (Arabidopsis)

BLAST of Spo11235.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902166738\|gb\|KNA07269.1\|	7.7e-118	99.5	hypothetical protein SOVF_1734...	[more]
gi\|731325027\|ref\|XP_010673289.1\|	1.0e-69	68.9	PREDICTED: uncharacterized pro...	[more]
gi\|756179896\|gb\|AJK93583.1\|	1.4e-63	65.8	YGGT family protein [Suaeda gl...	[more]
gi\|586726215\|ref\|XP_006849595.1\|	3.4e-57	64.2	PREDICTED: uncharacterized pro...	[more]
gi\|672171788\|ref\|XP_008805971.1\|	5.8e-57	67.0	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo11235.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QJ40_SPIOL	5.4e-118	99.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8CMK7_BETVU	7.1e-70	68.9	Uncharacterized protein OS=Bet...	[more]
A0A0C5AU66_9CARY	9.9e-64	65.8	Suaeda glauca YGGT family prot...	[more]
W1PU27_AMBTC	2.4e-57	64.2	Uncharacterized protein OS=Amb...	[more]
A0A067L9Z0_JATCU	7.6e-56	66.1	Uncharacterized protein OS=Jat...	[more]

BLAST of Spo11235.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
YMG11_ARATH	3.3e-52	62.0	YlmG homolog protein 1-1, chlo...	[more]
YMG12_ARATH	2.8e-51	54.6	YlmG homolog protein 1-2, chlo...	[more]
YLMG2_ARATH	9.7e-12	50.0	YlmG homolog protein 2, chloro...	[more]
YCF19_GUITH	2.2e-11	36.7	Uncharacterized protein ycf19 ...	[more]
YCF19_PORPU	1.0e-8	33.7	Uncharacterized protein ycf19 ...	[more]

BLAST of Spo11235.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT3G07430.1	1.9e-53	62.0	YGGT family protein	[more]
AT4G27990.1	1.6e-52	54.6	YGGT family protein	[more]
AT5G21920.1	5.5e-13	50.0	YGGT family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003425	CCB3/YggT	PFAM	PF02325	YGGT	coord: 159..226 score: 2.4
None	No IPR available	PANTHER	PTHR33219	FAMILY NOT NAMED	coord: 47..233 score: 2.1
None	No IPR available	PANTHER	PTHR33219:SF2	SUBFAMILY NOT NAMED	coord: 47..233 score: 2.1

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane