Spo11266.1 (mRNA) | SpinachBase

Overview


Name	Spo11266.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Ring finger protein, putative
Location	SpoScf_02170 : 74214 .. 81052 (-)
Sequence length	2284

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACTTCAATGAAATTTCTCTTTCTCTTTCTCTCTCCTCGAACTTTTTTTTTATCACATTAAAAAAGATGATTTTTAGACAAAGATAATGCTCTTGAAAAAAGAAAACAAATAAATTAAAAATATGCATCTCTTGCTGACTGACACACAAAGGCAGTCCAAGTATATTCCAAAACGACGCGGCCAAGCAAAATAGGTATGCACAAAGAATAATACTGCTGACGATAATAATACTTTTCAAATTTTCTTCGATTTTTTGCCATTTGTTGCTAGTTTGTAAATCTTGTAAACCCCATAAAAATCACTTTGCTGCAAAATCATTATTCTCAATTTTCATCAATCTTTTAGTGGTAAGTATTTATTTGATTTTGTTGAGCTGTAATAATGGTAGGTAGATTTATGTTTGTTAAGCTGCTTTGAAAATTTGATTATACTGTATTGAAGTATGAATTGGGTCGAATTTAGTTTTGAATTTTAGTTTGAATCTGTTTAATTCTTCTGGGGTTTGATTGAATTTAATGAGGTTTGAATCTAATCAGTGTAATTTGCTTGTTGGACTCTTTCTTGGGTTAGTACTGAAAGTTAGTCAAAGTCTTGAATTTAGGTTTTTTCGAGAATTGTCAGTGATTTTTGTAGATGGGTATTTATTTATTCTAATCTACTTTTGGGGTTTTCTTCCTGTTTATGAGTTTTCTTAAGTTGCATCTGTGGATATTTTGTGGGTTGGTGTAATCATTTGGGTTTAGGCATGTGATTTCCCTTATTGTTGATATTTATGATGGGATTATAATCTTTGTGGACTCCTTGATTGCATTAGTTTTTATGTGTTATGTGAATGTGCTGACCCTTTATTTCATCTAAAATGATGGGGAATTATAGAAAACTTGAGCTCTTCAACGCGCCTTTTGCTGGGTAAGTCTGTGGGTACGGACTCGTGGGGTTATTCGAGTGGTTAGGCATCTGTTCCTTGTGATTATACAGATTAGAATTAGGATTTCATTTTGAGAAGAACTATAGCCTAAACTTGGGGGAATTTGGATACTTGCTTTAACATTATAGTACTTTTGAGGTTTTAATAGACTTCTTTCCTGCTTTGGACATCTTAAACAGAATTTTCATTTGGAGGAGAACAAGAAAATTTCAGTCTGACTGTGCTGTTTGTTGTTTCTATGAACAGAAGGACCAGGGTTAACATATCAGTGTACCTTCACAGACTGAAGTCGATTGCTTGTCATTGGTGGTATCTAGTTATTGCATTTGGCAGGTTCATTCTAGTCAACAATCAGATTTCTACGGCCTTAAATCGATTCTCCATGCATTTGTTTTTCCCGTTCCTGTCGTTTGTCTTGAATGGCTATGCGGTTTGCAGAATATCAATGTAAAAGCCAATCAGACAAATACCCATTATTGATGGAGCAACCAGAAAGAAGAAATGACAATGAACATGTTATTGACATAAGGAGGAGTTTAGAAGCTTCCTCTTCTGGTGCTGCTCATGATAGGATTTCTAATGAGTTGAACTCTACTCTACCTGAAGGCAGACCTTCAAGTACTTCCAGAGCTTCGGTTTCTCAGCTGTCACTTCCTCTGTCCAACATCTCAAGTTCCAGGAATTCATCTAGCAGGAGAGGGAATGGTCACAGCCGAAGGCGCAGAAGCCCGTTAAATTCAGGGGTATGGATATCTGTTGAACTAGCTCTCACCTTAGGTCAGATTGTTGCTTCTGTCATCGTGTTGTCTTTGTCAAGACATGAGCATCCACGAACTCCGTTATTTGCTTGGATTGTGGGTTATGCTACAGGATGTGTTGCAACTCTCCCTCTTCTCTACTGGCGTTATCTTCATCGCAATCAAGCCTCAGAACAAGATTCTTCTCCATCCAGACAACCTTCTTCTAGTGGTAATCCACCTGTTGGACATTCATCTTCTCTTACTACTCAGATTCTAGAAGATGATAACCATACCACTATTTCCAACAGAAGTGCTAGTGGTCTAAGTGTTGCAATGGGAAATGCCAGGTAATGATTTGAATTTCTGACAGTGGTCCTTTGTTTCAAGTTCTATACTATTCTTTGCTATTGCTGACATGCTTTACACATTATGAACAATTATTCCTCCAGTGTAATTTATTCAGCTGACTATCTATTCATTACGCCTGCTCTTTGCTTCTTTGTCTTGCTTCCTACACTTGCCCCCCTGTAGGCCCTATTGTGGACATTGTTTGAAGTTAATGTAAAATCTAATATTCTATAGCTGACAGGCTGTGCAATATTAGTATTTAATCTTGGTCATATCGAATTGTAAGAACCTCTCTTGTTATGTTATGACCCGTGTGCATGTTATTGAAACATGAATTCTGCTTGTGAATTTAGACCAGAGATAGAAAAAGTTGGAGAGCATGAATTCACTTCAGAGGACCTTTTATTGCGGTCTGCCGGGGGGGGGGGGGTTGATGTGTGTGTAGAGGAGGAGGTGCTTGATTTTGGACCACCTTGTAAGTTGTTTAAGGTNGGGTTGATGTGTGTGTAGAGGAGGAGGTGCTTGATTTTGGACCACCTTGTAAGTTGTTTAAGGTGGTTGTTAAGTTCTCTGTTAGACAACATGGATTATACGTTTTCCACTGTAAACACTTGGGTAGGAGGGCGGTGGAGGAGGACAGGAGGTACTTGATTTTGTACCACCTTGGCACCTTGTAAATTGTTTAAGGTTGTTGTTAAGTTCTCTGTGAGACACATGGATTATACATTTTCCACTGTAAACACTTGATCTCCTTGCCGCGCACCCTAGTTTGGTTAACTTGTTGAATAAGGTCAAAATGTCGGCCATAAGCCCCATAAATCGCCCATTAAGCTTCTTCTTAAAGGACTAAAATTTAACCTATATAGCTTACTCACTACAACAACTTCATGATGTTCGTGATGGTCATATAAAACTATAATATAGATTTAGATTTATCACCCCTTAGTTTTAAAAAGGGGCCCAAGGCGCGCCTAGTCTCAAGGCACAAATCATGGCACCTTAGCCGTTGCAGGCTCAGTCCCCTATAAAAGGCGCGCTCCTTGTGCGCCTTTTCTTGGGCTCAAGGCGCCGCCTATTCTTGGGCTCAAGGCGCCGCCTATTCTTGGGCTCAAGGCGCCGCCTATTCTTGGGCTCAAGGCGCCGCCTTTTCTCGGTCTCAAGGCGCAACGCGTTATGCACCTTTTCTCGGGCCCAAGGTGCAAGGTCTTATGCGCCTTTTCTCGGGCTCAAGGTGCAACGCCTTATGTGCCTTATGGTATACGGCTCCAATGGCTAGTAAGTAATAATAATTATTTTTTAAAAAAAAGGCCAAAATCGCGTGACTTTAATGACTCCCCAATAGTTAGAGATCTTAGAATTTATTCTGTGATGAAAAGAGGAGAGAGAAACCCCAAATTTCTCCCTTATTTCTTATCTCTTTTATACATCAACAAGTCATGTAAACCCCTCCTTTTTTTATTTTTAAAGTAATTTTTTTATGTAAGGTGTGGCACACTTCTTCTTAGTTCTTTGAATCAAAATAAAGAGTCGGTGACTAAANGTCCCCCCCCCCCCCCCCCTCAAAAGGCTCTTAATTTTACTGTAATTCCTGGTACCTTTGTGATAGCAAGTAATACTACTTTGCGCCTTGGGCCTTGCGCCTACGCTCCAGGAACTTTTGCGCCTTGGTGTGCCCCGCCTTTTAAATCTAAGATTGACCCTTTGATCTCACTTTTGAAATAGCATTGTTATTGACAAGAGTAGCTGCATCACATCCCTACCCAATAAAGCCACATGTCTGATGTGTTATGAACACGAAGTGTGATACCTCACAAGTACTTTAAAGATGTAACTGCAAATGTGCAGCTGACAACCAAAGATTTTTTTACCATTCCCTCATCTCTCGTGAGAATGTATGCTGCTGTATATCTTAAAATTCAAAACCCTACTTGAACGAGAAATTAAACTGGGGCCTAGAAGTGCACAAATTTTCATCAAAGACCGAGTCTCTTCTCAATAATGCTAAAGTTTGTCATACTGATCAATTTAGCTTCCTTTCTCCAGGGTTTTCTGTGCTATGCTTCTGACAATCATGAGAATTTGTCAGTACTCCATTTCATATTAGTAGGCCATATTTGTTGAGGAATAATGCCTGCTGTTCTAGTCCATTAGTTTGCATATCACCATGTTCAACATTTTATTTGTAAAAAACATACACTTGTATATGCAGCTACTCAAGTGTAATACTTGAGTGTACTGAATTCCCCATGTATAGTGAATTGCATACCTCTTTTATCTTAAGGTAGACAACCATACCTTGACCGTAAATTTATCAAAACACAAATGGAGTTATATAGAAGATATTCTTACTTAATTTCTCAGAAGTATGTTTGGAGTGTCTTTTTCTAGCTTTTACTAAGATATGATGATGGAAAACAATTTTCAAAGTTGACAAGGATTGACCACAAAATTCATATACAAGTACGTCCTATTATTTTGGAACAAAGGACATTTTCTTTTATTTTTTATTGTGCTCTATGGTGGAACGATTCCAGCTTACGACCCCTAGATCTATTTACCGTAGAACTCATTCATAAAACTAACGAGATTATGATGTGAACTATTTTGTGGTTGGGTCCCTTATGAGTTTGATAGTTGTTCTGTTCACTCTTCAATAATAGAAGTAACTTAATTACTTGGTGGTACTTTCTGATTTCTTTGTGTTGCAAATGATACTGAAGAGGAGTATAAGAAATCATGTGAATTTCCTTGTGCTACAGGCTCAAGGTCTCAGTTGAATACTTTAAGATGGCCCTAGATTGCTTCTTCGCAATCTGGTTCGTGGTTGGTAATGTCTGGATCTTTGGGGGCCACGCTTCTTCTACTGAAGCTCCCAACTTGTACAGGTAGTGGTTATGTTTGCTACTGCTTAATCTTTAAAAAAATTCTCCTCTTTGTATAAGTCATTAACTCAGTAGAAAGTTCTCTCTTATCAGGTTATGCATAGTGTTCCTCGTCTTCAGTTGTATAGGATATGCTATGCCATTTATACTTTGCGCGACAATTTGCTGCTGTCTTCCATGTATAATATCTGTGCTAGGCTTTAGGGAAGATTTAAACCAAACCCGAGGAGCAACAACAGAGTCAATTAATGCTCTTCCAATCTACAAGTACAAGTTAAAGAAAAACAGGCACAGCGACGGTGGTAGTGAAGCTGGGGTAGTAGCTGCAGGAACAGACAAGGAACGTGTGATATCAGGAGAAGATGCTGTGAGTGCTTTCTGGCCTTTCCTTTCCATCCATGTTTCTTTTTATTTTTCCAAAGATATTTTTGGGTATTGCTTTATTTCCTTAGCAGCTGCCAACTTGTATTACATGAAAACAGAACATGGATACATGGTGAGGAAAAGCTAAGACAGAACTTTCAGGAAAAGTAGGATAGTGGAACCTTAAAAATTACAAGGCTGGAAACATTCTAACACGTTTCTATGTCAGATTGAAACCGCTTGATGATAATATAGTAGAAATTGAACTTTGGTTACATTCTATGTATTAAAAGAAAGATTGATGGAGACCAAAATCGTGTATAGATTTCCAGAGGTTTGAAAATTCCTAGAAGAACCGTGAGGTAAAGGTTGTAAATCTAGAAAAAAAAAATCTTAAGATTTTCCTCAGTATTTCAGGAACAGGGGAAATGACCTTTCGTAAAGTTTCCATGTCAACGAAGTTGTATTTAATGGTTGTTTTAGAAATGTTAACCGTATATTGGACTGTATTATGCGAGAGTCAAGTCTAGATACTTAAACTATTGGCTTTTCACCTTGTGCAATGTCCGGCTATTGTTCAATATCTTTACAACGTTAATGTTCAATATCTTTGCCTATTATACAGCTTTCATGGGATTTATTGTCTAACTTTGTGGTTATGTGGGTTTGCTATACAAGGAGGTGGTTATGTGCAAGCCATAAATGGCACTCTGCACCTTGAGCTAGCATGTATCAAGTTAGAAGTTAGAGATAAACAATCTACATGCTTAACCTCAAAGTTCCAATTTCTAGCAATTTGTCTGTCCCTTCCTCCATTAATCGGGGTCATTTAATCGGTGATTGTCCAATTATATGACTTTGTCCTCTCTTCTTACCTTACAGGTTTGTTGCATTTGCTTGGCGAAATATGCAAACAATGATGAACTTAGGGAGTTGCCATGTTCTCATTTGTTTCATAAGGAGTGTGTGGACAAGTGGCTCAAGATTAATGCTCTTTGCCCTCTTTGTAAGAACGAAGTTGGTGATTCCTTGCTTAGTTCACTTGCTGGAGCAACAGCCAGCCTACGACGCGCTGAGAGTAGGGTAGTTAGCAGCTGAGGAGGCACTGGTGTTGTGATATGACAAAAACACCCCTGTTTTCTGCAACATCAGCATCGTTATATTTGTGTTCAAGTATCAGAACCATTTGCAGGTATACTTTGTAGAATCAGCCCGTCAACTGGGTCTTGTATCGTACAGTTACGCTTATATTGTTGTCATACATGATGCTTTAATTCCTGAATTAGGTCAATACGAAACCTGAAAGAATGCCAGTGTTGATAATTACTGAGTTGGTTGGAGAAAAAGTTGAAATAGGGATGATTGTAATACTATTTTATATAATGTATACACCCTTCTCTGTTTTGCTGGGTGATAATTGGCCTTTGGCCCTGTTCAAAGTTATTTTTAGTTCACCATTTTGTTATTGTATCTGCAATCTATAAATTTACATTGTGTTTGGAGCAATCAAGTGTAAAAAACTCGAGCTTTTTAAGCTTGTGATAGTTCCAAAATTATCCATGATTTCGATTCAAAT

mRNA sequence

AAACTTCAATGAAATTTCTCTTTCTCTTTCTCTCTCCTCGAACTTTTTTTTTATCACATTAAAAAAGATGATTTTTAGACAAAGATAATGCTCTTGAAAAAAGAAAACAAATAAATTAAAAATATGCATCTCTTGCTGACTGACACACAAAGGCAGTCCAAGTATATTCCAAAACGACGCGGCCAAGCAAAATAGGTATGCACAAAGAATAATACTGCTGACGATAATAATACTTTTCAAATTTTCTTCGATTTTTTGCCATTTGTTGCTAGTTTGTAAATCTTGTAAACCCCATAAAAATCACTTTGCTGCAAAATCATTATTCTCAATTTTCATCAATCTTTTAGTGAAGGACCAGGGTTAACATATCAGTGTACCTTCACAGACTGAAGTCGATTGCTTGTCATTGGTGGTATCTAGTTATTGCATTTGGCAGGTTCATTCTAGTCAACAATCAGATTTCTACGGCCTTAAATCGATTCTCCATGCATTTGTTTTTCCCGTTCCTGTCGTTTGTCTTGAATGGCTATGCGGTTTGCAGAATATCAATGTAAAAGCCAATCAGACAAATACCCATTATTGATGGAGCAACCAGAAAGAAGAAATGACAATGAACATGTTATTGACATAAGGAGGAGTTTAGAAGCTTCCTCTTCTGGTGCTGCTCATGATAGGATTTCTAATGAGTTGAACTCTACTCTACCTGAAGGCAGACCTTCAAGTACTTCCAGAGCTTCGGTTTCTCAGCTGTCACTTCCTCTGTCCAACATCTCAAGTTCCAGGAATTCATCTAGCAGGAGAGGGAATGGTCACAGCCGAAGGCGCAGAAGCCCGTTAAATTCAGGGGTATGGATATCTGTTGAACTAGCTCTCACCTTAGGTCAGATTGTTGCTTCTGTCATCGTGTTGTCTTTGTCAAGACATGAGCATCCACGAACTCCGTTATTTGCTTGGATTGTGGGTTATGCTACAGGATGTGTTGCAACTCTCCCTCTTCTCTACTGGCGTTATCTTCATCGCAATCAAGCCTCAGAACAAGATTCTTCTCCATCCAGACAACCTTCTTCTAGTGGTAATCCACCTGTTGGACATTCATCTTCTCTTACTACTCAGATTCTAGAAGATGATAACCATACCACTATTTCCAACAGAAGTGCTAGTGGTCTAAGTGTTGCAATGGGAAATGCCAGGCTCAAGGTCTCAGTTGAATACTTTAAGATGGCCCTAGATTGCTTCTTCGCAATCTGGTTCGTGGTTGGTAATGTCTGGATCTTTGGGGGCCACGCTTCTTCTACTGAAGCTCCCAACTTGTACAGGTTATGCATAGTGTTCCTCGTCTTCAGTTGTATAGGATATGCTATGCCATTTATACTTTGCGCGACAATTTGCTGCTGTCTTCCATGTATAATATCTGTGCTAGGCTTTAGGGAAGATTTAAACCAAACCCGAGGAGCAACAACAGAGTCAATTAATGCTCTTCCAATCTACAAGTACAAGTTAAAGAAAAACAGGCACAGCGACGGTGGTAGTGAAGCTGGGGTAGTAGCTGCAGGAACAGACAAGGAACGTGTGATATCAGGAGAAGATGCTGTTTGTTGCATTTGCTTGGCGAAATATGCAAACAATGATGAACTTAGGGAGTTGCCATGTTCTCATTTGTTTCATAAGGAGTGTGTGGACAAGTGGCTCAAGATTAATGCTCTTTGCCCTCTTTGTAAGAACGAAGTTGGTGATTCCTTGCTTAGTTCACTTGCTGGAGCAACAGCCAGCCTACGACGCGCTGAGAGTAGGGTAGTTAGCAGCTGAGGAGGCACTGGTGTTGTGATATGACAAAAACACCCCTGTTTTCTGCAACATCAGCATCGTTATATTTGTGTTCAAGTATCAGAACCATTTGCAGGTATACTTTGTAGAATCAGCCCGTCAACTGGGTCTTGTATCGTACAGTTACGCTTATATTGTTGTCATACATGATGCTTTAATTCCTGAATTAGGTCAATACGAAACCTGAAAGAATGCCAGTGTTGATAATTACTGAGTTGGTTGGAGAAAAAGTTGAAATAGGGATGATTGTAATACTATTTTATATAATGTATACACCCTTCTCTGTTTTGCTGGGTGATAATTGGCCTTTGGCCCTGTTCAAAGTTATTTTTAGTTCACCATTTTGTTATTGTATCTGCAATCTATAAATTTACATTGTGTTTGGAGCAATCAAGTGTAAAAAACTCGAGCTTTTTAAGCTTGTGATAGTTCCAAAATTATCCATGATTTCGATTCAAAT

Coding sequence (CDS)

ATGGCTATGCGGTTTGCAGAATATCAATGTAAAAGCCAATCAGACAAATACCCATTATTGATGGAGCAACCAGAAAGAAGAAATGACAATGAACATGTTATTGACATAAGGAGGAGTTTAGAAGCTTCCTCTTCTGGTGCTGCTCATGATAGGATTTCTAATGAGTTGAACTCTACTCTACCTGAAGGCAGACCTTCAAGTACTTCCAGAGCTTCGGTTTCTCAGCTGTCACTTCCTCTGTCCAACATCTCAAGTTCCAGGAATTCATCTAGCAGGAGAGGGAATGGTCACAGCCGAAGGCGCAGAAGCCCGTTAAATTCAGGGGTATGGATATCTGTTGAACTAGCTCTCACCTTAGGTCAGATTGTTGCTTCTGTCATCGTGTTGTCTTTGTCAAGACATGAGCATCCACGAACTCCGTTATTTGCTTGGATTGTGGGTTATGCTACAGGATGTGTTGCAACTCTCCCTCTTCTCTACTGGCGTTATCTTCATCGCAATCAAGCCTCAGAACAAGATTCTTCTCCATCCAGACAACCTTCTTCTAGTGGTAATCCACCTGTTGGACATTCATCTTCTCTTACTACTCAGATTCTAGAAGATGATAACCATACCACTATTTCCAACAGAAGTGCTAGTGGTCTAAGTGTTGCAATGGGAAATGCCAGGCTCAAGGTCTCAGTTGAATACTTTAAGATGGCCCTAGATTGCTTCTTCGCAATCTGGTTCGTGGTTGGTAATGTCTGGATCTTTGGGGGCCACGCTTCTTCTACTGAAGCTCCCAACTTGTACAGGTTATGCATAGTGTTCCTCGTCTTCAGTTGTATAGGATATGCTATGCCATTTATACTTTGCGCGACAATTTGCTGCTGTCTTCCATGTATAATATCTGTGCTAGGCTTTAGGGAAGATTTAAACCAAACCCGAGGAGCAACAACAGAGTCAATTAATGCTCTTCCAATCTACAAGTACAAGTTAAAGAAAAACAGGCACAGCGACGGTGGTAGTGAAGCTGGGGTAGTAGCTGCAGGAACAGACAAGGAACGTGTGATATCAGGAGAAGATGCTGTTTGTTGCATTTGCTTGGCGAAATATGCAAACAATGATGAACTTAGGGAGTTGCCATGTTCTCATTTGTTTCATAAGGAGTGTGTGGACAAGTGGCTCAAGATTAATGCTCTTTGCCCTCTTTGTAAGAACGAAGTTGGTGATTCCTTGCTTAGTTCACTTGCTGGAGCAACAGCCAGCCTACGACGCGCTGAGAGTAGGGTAGTTAGCAGCTGA

Protein sequence

MAMRFAEYQCKSQSDKYPLLMEQPERRNDNEHVIDIRRSLEASSSGAAHDRISNELNSTLPEGRPSSTSRASVSQLSLPLSNISSSRNSSSRRGNGHSRRRRSPLNSGVWISVELALTLGQIVASVIVLSLSRHEHPRTPLFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQPSSSGNPPVGHSSSLTTQILEDDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFFAIWFVVGNVWIFGGHASSTEAPNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVLGFREDLNQTRGATTESINALPIYKYKLKKNRHSDGGSEAGVVAAGTDKERVISGEDAVCCICLAKYANNDELRELPCSHLFHKECVDKWLKINALCPLCKNEVGDSLLSSLAGATASLRRAESRVVSS

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo11266	Spo11266	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo11266.1	Spo11266.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11266.1.utr5p.2	Spo11266.1.utr5p.2	five_prime_UTR
Spo11266.1.utr5p.1	Spo11266.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11266.1.CDS.4	Spo11266.1.CDS.4	CDS
Spo11266.1.CDS.3	Spo11266.1.CDS.3	CDS
Spo11266.1.CDS.2	Spo11266.1.CDS.2	CDS
Spo11266.1.CDS.1	Spo11266.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11266.1.utr3p.1	Spo11266.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11266.1.exon.5	Spo11266.1.exon.5	exon
Spo11266.1.exon.4	Spo11266.1.exon.4	exon
Spo11266.1.exon.3	Spo11266.1.exon.3	exon
Spo11266.1.exon.2	Spo11266.1.exon.2	exon
Spo11266.1.exon.1	Spo11266.1.exon.1	exon

Homology

[Close]

BLAST of Spo11266.1 vs. NCBI nr
Match: gi|902232755|gb|KNA22784.1| (hypothetical protein SOVF_031240 [Spinacia oleracea])

HSP 1 Score: 796.2 bits (2055), Expect = 2.800e-227
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 1


		  
Query: 21  MEQPERRNDNEHVIDIRRSLEASSSGAAHDRISNELNSTLPEGRPSSTSRASVSQLSLPL 80
           MEQPERRNDNEHVIDIRRSLEASSSGAAHDRISNELNSTLPEGRPSSTSRASVSQLSLPL
Sbjct: 1   MEQPERRNDNEHVIDIRRSLEASSSGAAHDRISNELNSTLPEGRPSSTSRASVSQLSLPL 60

Query: 81  SNISSSRNSSSRRGNGHSRRRRSPLNSGVWISVELALTLGQIVASVIVLSLSRHEHPRTP 140
           SNISSSRNSSSRRGNGHSRRRRSPLNSGVWISVELALTLGQIVASVIVLSLSRHEHPRTP
Sbjct: 61  SNISSSRNSSSRRGNGHSRRRRSPLNSGVWISVELALTLGQIVASVIVLSLSRHEHPRTP 120

Query: 141 LFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQPSSSGNPPVGHSSSLTTQILE 200
           LFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQPSSSGNPPVGHSSSLTTQILE
Sbjct: 121 LFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQPSSSGNPPVGHSSSLTTQILE 180

Query: 201 DDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFFAIWFVVGNVWIFGGHASSTEA 260
           DDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFFAIWFVVGNVWIFGGHASSTEA
Sbjct: 181 DDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFFAIWFVVGNVWIFGGHASSTEA 240

Query: 261 PNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVLGFREDLNQTRGATTESINALP 320
           PNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVLGFREDLNQTRGATTESINALP
Sbjct: 241 PNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVLGFREDLNQTRGATTESINALP 300

Query: 321 IYKYKLKKNRHSDGGSEAGVVAAGTDKERVISGEDAVCCICLAKYANNDELRELPCSHLF 380
           IYKYKLKKNRHSDGGSEAGVVAAGTDKERVISGEDAVCCICLAKYANNDELRELPCSHLF
Sbjct: 301 IYKYKLKKNRHSDGGSEAGVVAAGTDKERVISGEDAVCCICLAKYANNDELRELPCSHLF 360

Query: 381 HKECVDKWLKINALCPLCKNEVGDSLLSSLAGATASLRRAESRVVSS 428
           HKECVDKWLKINALCPLCKNEVGDSLLSSLAGATASLRRAESRVVSS
Sbjct: 361 HKECVDKWLKINALCPLCKNEVGDSLLSSLAGATASLRRAESRVVSS 407

[Close]

BLAST of Spo11266.1 vs. NCBI nr
Match: gi|731320355|ref|XP_010670760.1| (PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 721.5 bits (1861), Expect = 8.800e-205
Identity = 366/428 (85.51%), Postives = 396/428 (92.52%), Query Frame = 1


		  
Query: 1   MAMRFAEYQCKSQSDKYPLLMEQPERRNDNEHVIDIRRSLEASSSGAAHDRISNELNSTL 60
           MAMRFAE QCKSQ+++Y LLME PE+RN+NE+VIDIRRS+EASSSG+AHDR SNE+ ST 
Sbjct: 1   MAMRFAESQCKSQTERYSLLMEHPEQRNENEYVIDIRRSVEASSSGSAHDRNSNEMESTQ 60

Query: 61  PEGRPSSTSRASVSQLSLPLSNISSSRNSS-SRRGNGHSRRRRSPLNSGVWISVELALTL 120
           PE RPSS++RA+VSQLSLPLSNIS+SRNSS SRRGNGHSRRRRSPLNSG+WISVEL LTL
Sbjct: 61  PEDRPSSSARATVSQLSLPLSNISNSRNSSFSRRGNGHSRRRRSPLNSGLWISVELVLTL 120

Query: 121 GQIVASVIVLSLSRHEHPRTPLFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQ 180
           GQIVASVIVLSLSRHEHPRTPLFAWI+GYATGC+ATLPLLYWRYLHRNQ SEQD S  RQ
Sbjct: 121 GQIVASVIVLSLSRHEHPRTPLFAWIMGYATGCIATLPLLYWRYLHRNQGSEQDPSQPRQ 180

Query: 181 PSSSGNPPVGHSSSLTTQILEDDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFF 240
            SS+GNP VGHSSS T Q LEDDNH   SNR+A+G SV M NARLK +VEYFKM LDCFF
Sbjct: 181 LSSNGNPIVGHSSSFTAQTLEDDNHIPTSNRNATGQSVGMRNARLKAAVEYFKMGLDCFF 240

Query: 241 AIWFVVGNVWIFGGHASSTEAPNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVL 300
           AIWFVVGNVWIFGGHASS+EAPNLYRLCIVFL+FSCIGYAMPFILCATICCCLPCIISVL
Sbjct: 241 AIWFVVGNVWIFGGHASSSEAPNLYRLCIVFLIFSCIGYAMPFILCATICCCLPCIISVL 300

Query: 301 GFREDLNQTRGATTESINALPIYKYKLKKNRHSDGGSEAGVVAAGTDKERVISGEDAVCC 360
           GFREDLNQTRGAT+ESINALP YK+KLKK+R+SDG  E+GVVAAGT+KER ISGEDAVCC
Sbjct: 301 GFREDLNQTRGATSESINALPTYKFKLKKSRNSDGVGESGVVAAGTEKERAISGEDAVCC 360

Query: 361 ICLAKYANNDELRELPCSHLFHKECVDKWLKINALCPLCKNEVGDSLLSSLAGATASLRR 420
           ICLAKY NNDELREL CSHLFHKECVDKWLKINALCPLCKNEVGD+LLSSLAGATASLRR
Sbjct: 361 ICLAKYVNNDELRELTCSHLFHKECVDKWLKINALCPLCKNEVGDTLLSSLAGATASLRR 420

Query: 421 AESRVVSS 428
           AE+RVVSS
Sbjct: 421 AENRVVSS 428

[Close]

BLAST of Spo11266.1 vs. NCBI nr
Match: gi|359476391|ref|XP_002284536.2| (PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Vitis vinifera])

HSP 1 Score: 553.9 bits (1426), Expect = 2.400e-154
Identity = 288/419 (68.74%), Postives = 334/419 (79.71%), Query Frame = 1


		  
Query: 1   MAMRFAEYQCKSQSDKYPLLMEQPERRNDNEHVIDIRRSLEASSSGAAHDRISNELNSTL 60
           MA+   E   KSQSD YPLLMEQP  + D EH+IDI RS +ASSS +++D  S  L+   
Sbjct: 1   MAIPSLELHSKSQSDIYPLLMEQPGNQIDTEHIIDITRSGDASSSNSSNDGPSTSLDQLQ 60

Query: 61  PEGRPSSTSRASVSQLSLPLSNISSSRNSSSRRGNGHSRRRRSPLNSGVWISVELALTLG 120
            + RP+S++R  +SQ S   SN+S+SRNS  RR +  +RRRRSPLNSG+WIS+ELALT+ 
Sbjct: 61  HDDRPASSARVPISQPSFSSSNVSNSRNSFRRRAD--ARRRRSPLNSGLWISIELALTVS 120

Query: 121 QIVASVIVLSLSRHEHPRTPLFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQP 180
           QI+ASV+VLSLSRHEHP  PLF WIVGYA+GCVATLP+LYWR+ HRNQ  EQ+S+ SRQ 
Sbjct: 121 QIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWRFRHRNQGHEQESAQSRQV 180

Query: 181 SSSGNPPVGHSSSLT-TQILEDDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFF 240
           S   N P G + SL+ T   E+++       + +  SV   +ARLKV VEYFKMALDCFF
Sbjct: 181 SFHSNLPGGPTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLSARLKVLVEYFKMALDCFF 240

Query: 241 AIWFVVGNVWIFGGHASSTEAPNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVL 300
           A+WFVVGNVWIFGGH+SS+EAPNLYRLCIVFL FSCIGYAMPFILCATICCCLPCIIS+L
Sbjct: 241 AVWFVVGNVWIFGGHSSSSEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISIL 300

Query: 301 GFREDLNQTRGATTESINALPIYKYKLKKNRHSD------GGSEAGVVAAGTDKERVISG 360
           GFREDL QTRGAT+ESINALP YK+KLKKNR+ D      G  E GVVAAGT++ERVISG
Sbjct: 301 GFREDLTQTRGATSESINALPTYKFKLKKNRNGDDREGNSGAGEGGVVAAGTERERVISG 360

Query: 361 EDAVCCICLAKYANNDELRELPCSHLFHKECVDKWLKINALCPLCKNEVGDSLLSSLAG 413
           EDAVCCICLAKYANNDELRELPCSH FHKECVDKWLKINALCPLCK EVG+S L SL+G
Sbjct: 361 EDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKINALCPLCKREVGESFLGSLSG 417

[Close]

BLAST of Spo11266.1 vs. NCBI nr
Match: gi|743814499|ref|XP_011019728.1| (PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Populus euphratica])

HSP 1 Score: 548.1 bits (1411), Expect = 1.300e-152
Identity = 289/420 (68.81%), Postives = 338/420 (80.48%), Query Frame = 1


		  
Query: 7   EYQCKSQSDKYPLLMEQPERRNDNEHVIDIRRSLEASSSGAAHDRISNELNSTLPEGRPS 66
           E   +SQ+D +PLLME+PE  N + H+IDI R++E   S  +HDRIS+ L ++  E RPS
Sbjct: 7   ELHSESQTDTFPLLMERPENLNSSTHIIDIPRNIEVPGS-PSHDRISSGLEASSHEDRPS 66

Query: 67  STSRASVSQLSLPLSNISSSRNSSSRRGNGHSRRRRSPLNSGVWISVELALTLGQIVASV 126
           S +RA  +Q S  LSN ++SR+SS  R  G +RRRRSPLNSG+WISVEL LTL QIVAS+
Sbjct: 67  SGARAPSTQPSTSLSNGTNSRSSSLIR-RGEARRRRSPLNSGLWISVELVLTLSQIVASI 126

Query: 127 IVLSLSRHEHPRTPLFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQPSSSGNP 186
           +VLS+SRHEHP  PLFAWIVGYA+GCVATLPLLYWRY +RNQ+ EQD + + Q S+  N 
Sbjct: 127 VVLSVSRHEHPHAPLFAWIVGYASGCVATLPLLYWRYRYRNQSLEQDPAQNHQGSAHINV 186

Query: 187 PVGHSSSLTTQILEDDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFFAIWFVVG 246
           P G  S   ++  E D+H + +  S  G   A+ NARLKV VEYFKMALDCFFA+WFVVG
Sbjct: 187 PAGPFSLSVSRNSESDDHRSATT-SPRGGQYAVLNARLKVLVEYFKMALDCFFAVWFVVG 246

Query: 247 NVWIFGGHASSTEAPNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVLGFREDLN 306
           NVWIFGGH+S+ EAPNLYRLCIVFL FSCIGYAMPFILCATICCCLPCIISVLGFREDL 
Sbjct: 247 NVWIFGGHSSAEEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGFREDLT 306

Query: 307 QTRGATTESINALPIYKYKLKKNRH----SDGGSEAGVVAAGTDKERVISGEDAVCCICL 366
           QTRGATTESI+ALP YK+KL KNR+    S G S+ GVVAAGT+KERVISGEDAVCCICL
Sbjct: 307 QTRGATTESIDALPTYKFKLIKNRNGEDSSAGASDGGVVAAGTEKERVISGEDAVCCICL 366

Query: 367 AKYANNDELRELPCSHLFHKECVDKWLKINALCPLCKNEVGDSLLSSLAGATASLRRAES 423
           AK+ANNDELRELPCSH FHKECVDKWLKINA CPLCK+EVG+SLL SL+G ++S RR E+
Sbjct: 367 AKFANNDELRELPCSHFFHKECVDKWLKINASCPLCKSEVGESLLGSLSGLSSSQRRVEN 423

[Close]

BLAST of Spo11266.1 vs. NCBI nr
Match: gi|566178249|ref|XP_002309588.2| (zinc finger family protein [Populus trichocarpa])

HSP 1 Score: 544.7 bits (1402), Expect = 1.500e-151
Identity = 288/420 (68.57%), Postives = 337/420 (80.24%), Query Frame = 1


		  
Query: 7   EYQCKSQSDKYPLLMEQPERRNDNEHVIDIRRSLEASSSGAAHDRISNELNSTLPEGRPS 66
           E   +SQ+D +PLLME+PE  N + H+IDI R++E   S  +HDRIS+ L ++  E RPS
Sbjct: 7   ELHSESQTDTFPLLMERPENLNSSAHIIDIPRNIEVPGS-PSHDRISSGLEASSHEDRPS 66

Query: 67  STSRASVSQLSLPLSNISSSRNSSSRRGNGHSRRRRSPLNSGVWISVELALTLGQIVASV 126
           S  RA  +Q S  LSN ++SR+SS  R  G +RRRRSPLNSG+WISVEL LTL QIVAS+
Sbjct: 67  SGVRAPSTQPSTSLSNGTNSRSSSLIR-RGEARRRRSPLNSGLWISVELVLTLSQIVASI 126

Query: 127 IVLSLSRHEHPRTPLFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQPSSSGNP 186
           +VLS+SRHEHP  PLFAWIVGYA+GCVATLPLLYWRY +RNQ+ EQDS+ + Q S+  N 
Sbjct: 127 VVLSVSRHEHPHAPLFAWIVGYASGCVATLPLLYWRYRYRNQSLEQDSAQNHQGSAHINV 186

Query: 187 PVGHSSSLTTQILEDDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFFAIWFVVG 246
           P G  S   ++  E D+  + +  S  G   A+ NARLKV VEYFKMALDCFFA+WFVVG
Sbjct: 187 PAGPFSLSVSRNSESDDRRSATT-SPRGSQNAVLNARLKVLVEYFKMALDCFFAVWFVVG 246

Query: 247 NVWIFGGHASSTEAPNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVLGFREDLN 306
           NVWIFGGH+S+ EAPNLYRLCIVFL FSCIGYAMPFILCATICCCLPCIISVLG+REDL 
Sbjct: 247 NVWIFGGHSSAEEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGYREDLT 306

Query: 307 QTRGATTESINALPIYKYKLKKNRH----SDGGSEAGVVAAGTDKERVISGEDAVCCICL 366
           QTRGATTESI+ALP YK+KL KNR+    S G S+ GVVAAGT+KERVISGEDAVCCICL
Sbjct: 307 QTRGATTESIDALPTYKFKLIKNRNGEDSSAGASDGGVVAAGTEKERVISGEDAVCCICL 366

Query: 367 AKYANNDELRELPCSHLFHKECVDKWLKINALCPLCKNEVGDSLLSSLAGATASLRRAES 423
           AK+ANNDELRELPCSH FHKECVDKWLKINA CPLCK+EVG+SLL SL+G ++S RR E+
Sbjct: 367 AKFANNDELRELPCSHFFHKECVDKWLKINASCPLCKSEVGESLLGSLSGLSSSQRRVEN 423

[Close]

BLAST of Spo11266.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RV36_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_031240 PE=4 SV=1)

HSP 1 Score: 796.2 bits (2055), Expect = 2.000e-227
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 1


		  
Query: 21  MEQPERRNDNEHVIDIRRSLEASSSGAAHDRISNELNSTLPEGRPSSTSRASVSQLSLPL 80
           MEQPERRNDNEHVIDIRRSLEASSSGAAHDRISNELNSTLPEGRPSSTSRASVSQLSLPL
Sbjct: 1   MEQPERRNDNEHVIDIRRSLEASSSGAAHDRISNELNSTLPEGRPSSTSRASVSQLSLPL 60

Query: 81  SNISSSRNSSSRRGNGHSRRRRSPLNSGVWISVELALTLGQIVASVIVLSLSRHEHPRTP 140
           SNISSSRNSSSRRGNGHSRRRRSPLNSGVWISVELALTLGQIVASVIVLSLSRHEHPRTP
Sbjct: 61  SNISSSRNSSSRRGNGHSRRRRSPLNSGVWISVELALTLGQIVASVIVLSLSRHEHPRTP 120

Query: 141 LFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQPSSSGNPPVGHSSSLTTQILE 200
           LFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQPSSSGNPPVGHSSSLTTQILE
Sbjct: 121 LFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQPSSSGNPPVGHSSSLTTQILE 180

Query: 201 DDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFFAIWFVVGNVWIFGGHASSTEA 260
           DDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFFAIWFVVGNVWIFGGHASSTEA
Sbjct: 181 DDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFFAIWFVVGNVWIFGGHASSTEA 240

Query: 261 PNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVLGFREDLNQTRGATTESINALP 320
           PNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVLGFREDLNQTRGATTESINALP
Sbjct: 241 PNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVLGFREDLNQTRGATTESINALP 300

Query: 321 IYKYKLKKNRHSDGGSEAGVVAAGTDKERVISGEDAVCCICLAKYANNDELRELPCSHLF 380
           IYKYKLKKNRHSDGGSEAGVVAAGTDKERVISGEDAVCCICLAKYANNDELRELPCSHLF
Sbjct: 301 IYKYKLKKNRHSDGGSEAGVVAAGTDKERVISGEDAVCCICLAKYANNDELRELPCSHLF 360

Query: 381 HKECVDKWLKINALCPLCKNEVGDSLLSSLAGATASLRRAESRVVSS 428
           HKECVDKWLKINALCPLCKNEVGDSLLSSLAGATASLRRAESRVVSS
Sbjct: 361 HKECVDKWLKINALCPLCKNEVGDSLLSSLAGATASLRRAESRVVSS 407

[Close]

BLAST of Spo11266.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CY76_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g043630 PE=4 SV=1)

HSP 1 Score: 721.5 bits (1861), Expect = 6.200e-205
Identity = 366/428 (85.51%), Postives = 396/428 (92.52%), Query Frame = 1


		  
Query: 1   MAMRFAEYQCKSQSDKYPLLMEQPERRNDNEHVIDIRRSLEASSSGAAHDRISNELNSTL 60
           MAMRFAE QCKSQ+++Y LLME PE+RN+NE+VIDIRRS+EASSSG+AHDR SNE+ ST 
Sbjct: 1   MAMRFAESQCKSQTERYSLLMEHPEQRNENEYVIDIRRSVEASSSGSAHDRNSNEMESTQ 60

Query: 61  PEGRPSSTSRASVSQLSLPLSNISSSRNSS-SRRGNGHSRRRRSPLNSGVWISVELALTL 120
           PE RPSS++RA+VSQLSLPLSNIS+SRNSS SRRGNGHSRRRRSPLNSG+WISVEL LTL
Sbjct: 61  PEDRPSSSARATVSQLSLPLSNISNSRNSSFSRRGNGHSRRRRSPLNSGLWISVELVLTL 120

Query: 121 GQIVASVIVLSLSRHEHPRTPLFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQ 180
           GQIVASVIVLSLSRHEHPRTPLFAWI+GYATGC+ATLPLLYWRYLHRNQ SEQD S  RQ
Sbjct: 121 GQIVASVIVLSLSRHEHPRTPLFAWIMGYATGCIATLPLLYWRYLHRNQGSEQDPSQPRQ 180

Query: 181 PSSSGNPPVGHSSSLTTQILEDDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFF 240
            SS+GNP VGHSSS T Q LEDDNH   SNR+A+G SV M NARLK +VEYFKM LDCFF
Sbjct: 181 LSSNGNPIVGHSSSFTAQTLEDDNHIPTSNRNATGQSVGMRNARLKAAVEYFKMGLDCFF 240

Query: 241 AIWFVVGNVWIFGGHASSTEAPNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVL 300
           AIWFVVGNVWIFGGHASS+EAPNLYRLCIVFL+FSCIGYAMPFILCATICCCLPCIISVL
Sbjct: 241 AIWFVVGNVWIFGGHASSSEAPNLYRLCIVFLIFSCIGYAMPFILCATICCCLPCIISVL 300

Query: 301 GFREDLNQTRGATTESINALPIYKYKLKKNRHSDGGSEAGVVAAGTDKERVISGEDAVCC 360
           GFREDLNQTRGAT+ESINALP YK+KLKK+R+SDG  E+GVVAAGT+KER ISGEDAVCC
Sbjct: 301 GFREDLNQTRGATSESINALPTYKFKLKKSRNSDGVGESGVVAAGTEKERAISGEDAVCC 360

Query: 361 ICLAKYANNDELRELPCSHLFHKECVDKWLKINALCPLCKNEVGDSLLSSLAGATASLRR 420
           ICLAKY NNDELREL CSHLFHKECVDKWLKINALCPLCKNEVGD+LLSSLAGATASLRR
Sbjct: 361 ICLAKYVNNDELRELTCSHLFHKECVDKWLKINALCPLCKNEVGDTLLSSLAGATASLRR 420

Query: 421 AESRVVSS 428
           AE+RVVSS
Sbjct: 421 AENRVVSS 428

[Close]

BLAST of Spo11266.1 vs. UniProtKB/TrEMBL
Match: B9H9P9_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0006s26310g PE=4 SV=2)

HSP 1 Score: 544.7 bits (1402), Expect = 1.000e-151
Identity = 288/420 (68.57%), Postives = 337/420 (80.24%), Query Frame = 1


		  
Query: 7   EYQCKSQSDKYPLLMEQPERRNDNEHVIDIRRSLEASSSGAAHDRISNELNSTLPEGRPS 66
           E   +SQ+D +PLLME+PE  N + H+IDI R++E   S  +HDRIS+ L ++  E RPS
Sbjct: 7   ELHSESQTDTFPLLMERPENLNSSAHIIDIPRNIEVPGS-PSHDRISSGLEASSHEDRPS 66

Query: 67  STSRASVSQLSLPLSNISSSRNSSSRRGNGHSRRRRSPLNSGVWISVELALTLGQIVASV 126
           S  RA  +Q S  LSN ++SR+SS  R  G +RRRRSPLNSG+WISVEL LTL QIVAS+
Sbjct: 67  SGVRAPSTQPSTSLSNGTNSRSSSLIR-RGEARRRRSPLNSGLWISVELVLTLSQIVASI 126

Query: 127 IVLSLSRHEHPRTPLFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQPSSSGNP 186
           +VLS+SRHEHP  PLFAWIVGYA+GCVATLPLLYWRY +RNQ+ EQDS+ + Q S+  N 
Sbjct: 127 VVLSVSRHEHPHAPLFAWIVGYASGCVATLPLLYWRYRYRNQSLEQDSAQNHQGSAHINV 186

Query: 187 PVGHSSSLTTQILEDDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFFAIWFVVG 246
           P G  S   ++  E D+  + +  S  G   A+ NARLKV VEYFKMALDCFFA+WFVVG
Sbjct: 187 PAGPFSLSVSRNSESDDRRSATT-SPRGSQNAVLNARLKVLVEYFKMALDCFFAVWFVVG 246

Query: 247 NVWIFGGHASSTEAPNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVLGFREDLN 306
           NVWIFGGH+S+ EAPNLYRLCIVFL FSCIGYAMPFILCATICCCLPCIISVLG+REDL 
Sbjct: 247 NVWIFGGHSSAEEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGYREDLT 306

Query: 307 QTRGATTESINALPIYKYKLKKNRH----SDGGSEAGVVAAGTDKERVISGEDAVCCICL 366
           QTRGATTESI+ALP YK+KL KNR+    S G S+ GVVAAGT+KERVISGEDAVCCICL
Sbjct: 307 QTRGATTESIDALPTYKFKLIKNRNGEDSSAGASDGGVVAAGTEKERVISGEDAVCCICL 366

Query: 367 AKYANNDELRELPCSHLFHKECVDKWLKINALCPLCKNEVGDSLLSSLAGATASLRRAES 423
           AK+ANNDELRELPCSH FHKECVDKWLKINA CPLCK+EVG+SLL SL+G ++S RR E+
Sbjct: 367 AKFANNDELRELPCSHFFHKECVDKWLKINASCPLCKSEVGESLLGSLSGLSSSQRRVEN 423

[Close]

BLAST of Spo11266.1 vs. UniProtKB/TrEMBL
Match: M5XYE2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005884mg PE=4 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 1.100e-150
Identity = 290/423 (68.56%), Postives = 333/423 (78.72%), Query Frame = 1


		  
Query: 11  KSQSDKYPLLMEQ--PERRNDNEHVIDIRRSLEASSSGAAHDRISNELNSTLPEGRPSST 70
           +SQ+    LLMEQ  PE  N +EH+IDI  S +ASSS   H R  N LN++  E RPS++
Sbjct: 11  ESQTYTSSLLMEQSRPEDMNGSEHIIDITGSSDASSSSLPHGRSLNSLNASQQEDRPSTS 70

Query: 71  SRASVSQLSLPLSNISSSRNSSSRRGNGHSRRRRSPLNSGVWISVELALTLGQIVASVIV 130
            RAS  Q S+  SN S+SRNS++ R  G +RRRRSPLNSG+WIS+EL LT+ QIVASV+V
Sbjct: 71  PRASTFQPSIFSSNGSNSRNSATGR-RGDTRRRRSPLNSGLWISIELVLTVSQIVASVVV 130

Query: 131 LSLSRHEHPRTPLFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQPSSSGNPPV 190
           LSLSRHEHPRTPLFAWIVGYA+GCVA LPLLYWRY HRNQ SEQDS+ +R  S    P  
Sbjct: 131 LSLSRHEHPRTPLFAWIVGYASGCVAILPLLYWRYRHRNQVSEQDSAQARHSSQINVPAR 190

Query: 191 GHSSSLTTQILEDDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFFAIWFVVGNV 250
             S S++     D   TT S+RS+    V   + R+KV VEYFKMALDCFFA+WFVVGNV
Sbjct: 191 PFSLSVSRTSEGDLQTTTASSRSSQSSEVL--SRRVKVLVEYFKMALDCFFAVWFVVGNV 250

Query: 251 WIFGGHASSTEAPNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVLGFREDLNQT 310
           WIFGGH+S++EAPNLYRLCIVFL FSCIGYAMPFILCATICCCLPCIISVLGFREDL Q 
Sbjct: 251 WIFGGHSSASEAPNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGFREDLTQA 310

Query: 311 RGATTESINALPIYKYKLKKNRHSD-------GGSEAGVVAAGTDKERVISGEDAVCCIC 370
           RGAT ESINALP YK+KLKKN++SD       G SE GVVAAGT+KERVISGEDAVCCIC
Sbjct: 311 RGATPESINALPTYKFKLKKNKNSDNRDSSSAGVSEGGVVAAGTEKERVISGEDAVCCIC 370

Query: 371 LAKYANNDELRELPCSHLFHKECVDKWLKINALCPLCKNEVGDSLLSSLAGATASLRRAE 425
           LAKYANNDELRELPCSH FHKECVDKWLKINA CPLCK+EVG+S+L SL+  + + +R +
Sbjct: 371 LAKYANNDELRELPCSHFFHKECVDKWLKINASCPLCKSEVGESILGSLSAISGTQQRGD 430

[Close]

BLAST of Spo11266.1 vs. UniProtKB/TrEMBL
Match: D7SUI3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g04280 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 8.200e-149
Identity = 276/399 (69.17%), Postives = 321/399 (80.45%), Query Frame = 1


		  
Query: 21  MEQPERRNDNEHVIDIRRSLEASSSGAAHDRISNELNSTLPEGRPSSTSRASVSQLSLPL 80
           MEQP  + D EH+IDI RS +ASSS +++D  S  L+    + RP+S++R  +SQ S   
Sbjct: 1   MEQPGNQIDTEHIIDITRSGDASSSNSSNDGPSTSLDQLQHDDRPASSARVPISQPSFSS 60

Query: 81  SNISSSRNSSSRRGNGHSRRRRSPLNSGVWISVELALTLGQIVASVIVLSLSRHEHPRTP 140
           SN+S+SRNS  RR +  +RRRRSPLNSG+WIS+ELALT+ QI+ASV+VLSLSRHEHP  P
Sbjct: 61  SNVSNSRNSFRRRAD--ARRRRSPLNSGLWISIELALTVSQIIASVVVLSLSRHEHPHAP 120

Query: 141 LFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQPSSSGNPPVGHSSSLT-TQIL 200
           LF WIVGYA+GCVATLP+LYWR+ HRNQ  EQ+S+ SRQ S   N P G + SL+ T   
Sbjct: 121 LFTWIVGYASGCVATLPILYWRFRHRNQGHEQESAQSRQVSFHSNLPGGPTFSLSVTGTS 180

Query: 201 EDDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFFAIWFVVGNVWIFGGHASSTE 260
           E+++       + +  SV   +ARLKV VEYFKMALDCFFA+WFVVGNVWIFGGH+SS+E
Sbjct: 181 EEEDRQPSVPATRNSQSVRRLSARLKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSSSE 240

Query: 261 APNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVLGFREDLNQTRGATTESINAL 320
           APNLYRLCIVFL FSCIGYAMPFILCATICCCLPCIIS+LGFREDL QTRGAT+ESINAL
Sbjct: 241 APNLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGFREDLTQTRGATSESINAL 300

Query: 321 PIYKYKLKKNRHSD------GGSEAGVVAAGTDKERVISGEDAVCCICLAKYANNDELRE 380
           P YK+KLKKNR+ D      G  E GVVAAGT++ERVISGEDAVCCICLAKYANNDELRE
Sbjct: 301 PTYKFKLKKNRNGDDREGNSGAGEGGVVAAGTERERVISGEDAVCCICLAKYANNDELRE 360

Query: 381 LPCSHLFHKECVDKWLKINALCPLCKNEVGDSLLSSLAG 413
           LPCSH FHKECVDKWLKINALCPLCK EVG+S L SL+G
Sbjct: 361 LPCSHFFHKECVDKWLKINALCPLCKREVGESFLGSLSG 397

[Close]

BLAST of Spo11266.1 vs. ExPASy Swiss-Prot
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.200e-36
Identity = 104/302 (34.44%), Postives = 150/302 (49.67%), Query Frame = 1


		  
Query: 111 ISVELALTLGQIVASVIVLSLSRHEHPRTPLFAWIVGYATGCVATLPLLYWRYLHRNQAS 170
           + +++   L  +   V VL LSR E P  PL  W+VGY   C   +  +   Y  R +  
Sbjct: 110 VFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRR- 169

Query: 171 EQDSSPSRQPSSSGNPPVGHSSS---LTTQILEDDNHTTISNRSASGLSVAMGNARLKVS 230
                  R P   G   + +SSS   ++   LED   T  SN +                
Sbjct: 170 -------RHPEDGGGSGLTNSSSQQYVSLAQLEDRGET--SNPA---------------- 229

Query: 231 VEYFKMALDCFFAIWFVVGNVWIF-GGHASSTEAPNLYRLCIVFLVFS------CIGYAM 290
            ++ + A   F  IW+++G  W+  GG   S+++P LY LCI+FL F       C+  A+
Sbjct: 230 -KHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCV--AL 289

Query: 291 PFILCATICCCLPCIISVLGFREDLNQTRGATTESINALPIYKYKLKKNRHSDGGSEAGV 350
             ++   +CCCLPCII++L    D     GA+   I+ +P +++    N     G   G+
Sbjct: 290 ACVIGLAVCCCLPCIIAILYAVAD---QEGASKNDIDQMPKFRFTKTGNVEKLSGKARGI 349

Query: 351 VA-AGTDK--ERVISGEDAVCCICLAKYANNDELRELPCSHLFHKECVDKWLKINALCPL 400
           +   GTD   ER +S EDA CCICL +Y +  ELRELPC+H FH  C+DKWL IN+ CPL
Sbjct: 350 MTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPL 379

[Close]

BLAST of Spo11266.1 vs. ExPASy Swiss-Prot
Match: RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 1.600e-36
Identity = 106/310 (34.19%), Postives = 148/310 (47.74%), Query Frame = 1


		  
Query: 111 ISVELALTLGQIVASVIVLSLSRHEHPRTPLFAWIVGYATGCVATLPLLYWRYLHRNQAS 170
           + ++    L  +V +  VL LS  E+P  PL  WI+GY   C+  +  +   Y  RN   
Sbjct: 75  VVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRR 134

Query: 171 EQDSSP-SRQPSSSGNPPVGHSSSLTTQILEDDNHTTISNRSASGLSVAMGNARLKVSVE 230
            +D SP S   SSS +  +     L      D+ +  +        S A          +
Sbjct: 135 RRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFA----------K 194

Query: 231 YFKMALDCFFAIWFVVGNVWIF-GGHASSTEAPNLYRLCIVFLVFS------CIGYAMPF 290
           + + A      IW+V+G  W+  GG   +  +P LY LCIVFL F       C+  A+  
Sbjct: 195 HLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCV--ALAC 254

Query: 291 ILCATICCCLPCIISVLGFREDLNQTRGATTESINALPIYKY-------KLKKNRHSDGG 350
           ++   +CCCLPCII+VL     + +  GA+ E I+ L  +K+       K   +     G
Sbjct: 255 VIGIAVCCCLPCIIAVL---YAVAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQG 314

Query: 351 SEAGVVA-AGTDK--ERVISGEDAVCCICLAKYANNDELRELPCSHLFHKECVDKWLKIN 403
              GV+   GTD   E  +  EDA CCICL+ Y +  ELRELPC H FH  CVDKWL IN
Sbjct: 315 DSGGVMTECGTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYIN 369

[Close]

BLAST of Spo11266.1 vs. ExPASy Swiss-Prot
Match: RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.100e-36
Identity = 124/395 (31.39%), Postives = 184/395 (46.58%), Query Frame = 1


		  
Query: 40  LEASSSGAAHDRIS----------NELNSTLPEGRPSSTSRASVSQLSLPLSNISSSR-- 99
           + ASSS ++ D I           NE N+    G   S  R  + + +  LS  SS R  
Sbjct: 13  IPASSSSSSSDAIDPAPLLFNGDDNEGNNGGGGGERRSVRRQGLREAARFLSRASSGRVM 72

Query: 100 ---NSSSRRGNGHSRRRRSP--LNSGVWISVELALTLGQIVASVIVLSLSRHEHPRTPLF 159
              +   R         R      S   + +++   L  +  +  +L +SR EHP  PL 
Sbjct: 73  REPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLR 132

Query: 160 AWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQPSSSGNPPVGHSSSLTTQILEDD 219
            W++GYA  CV  +  +   Y  RN+     ++ +  P S  +     SSSL  + L   
Sbjct: 133 VWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSR 192

Query: 220 NHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFFAIWFVVGNVWIF-GGHASSTEAP 279
            ++ + + S   L     +       ++ + A   F  IW+++G  W+  GG   + E+P
Sbjct: 193 RNSGVQDLSLGHLDTESSSV-----AKHLESANTMFSFIWWIIGFYWVSAGGQELAQESP 252

Query: 280 NLYRLCIVFLVFS------CIGYAMPFILCATICCCLPCIISVLGFREDLNQTRGATTES 339
            +Y L IVFL F       C+  A+  ++   +CCCLPCII+VL    D     GA+ E 
Sbjct: 253 RIYWLSIVFLGFDVFFVVFCV--ALACVIGIAVCCCLPCIIAVLYAVAD---QEGASKED 312

Query: 340 INALPIYKYKL--KKNRHSD----GGSEAGVVAAGTDK--ERVISGEDAVCCICLAKYAN 399
           I  L  +K++     N+H++    G +E  +   GTD   E  +  EDA CCICL+ Y +
Sbjct: 313 IEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYED 372

Query: 400 NDELRELPCSHLFHKECVDKWLKINALCPLCKNEV 403
             ELRELPC H FH  CVDKWL INA CPLCK  +
Sbjct: 373 GTELRELPCGHHFHCSCVDKWLYINATCPLCKYNI 397

[Close]

BLAST of Spo11266.1 vs. ExPASy Swiss-Prot
Match: RIE1_ARATH (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.300e-25
Identity = 104/375 (27.73%), Postives = 160/375 (42.67%), Query Frame = 1


		  
Query: 42  ASSSGAAHDRISNELNSTLPEGRPSSTSRASVSQLSLPLSNISSSRNSS----SRRGNGH 101
           +S S AA D+ +  L         SS+S A  + L++ L  I+  R  S           
Sbjct: 5   SSDSTAARDQHAPLLRPRHDGSFSSSSSSARPTALAVLLGRITGHRAPSMLVRETAARAL 64

Query: 102 SRRRRSPLNSGVWISVELALTLGQIVASVIVLSLSRHEHPRTPLFAWIVGYATGCVATLP 161
             RR     S   ++ ++      ++AS ++L  +  E P  P+  WI  Y   C+  + 
Sbjct: 65  EERRIDWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVV 124

Query: 162 LLYWRYLHRNQASEQDSSPSRQPSSSGNPPVGHSSSLTTQILEDDNHTTISNRSASGLSV 221
           L++  Y  RN       S  R           ++     +   DDN TT S         
Sbjct: 125 LVWSEYWRRN-------STRRARDLESYDHEDYNIEYDYEQDSDDNSTTYS--------- 184

Query: 222 AMGNARLKVSVEYFKMALDCFFAIWFVVGNVWIF-GGHASSTEAPNLYRLCIVFLV---- 281
                     V+  +        IW+++G  W+  GG     EAPNLY L ++FL     
Sbjct: 185 ---------FVKRCESINTVISFIWWIIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVF 244

Query: 282 FSCIGYAMPFILCATICCCLPCIISVLGFREDLNQTRGATTESINALPIYKYKLKKNRHS 341
           F+     +  ++   +CCCLPCII++L     +  T G +   +  LP+YK+K   +   
Sbjct: 245 FAVFCVVLACLVGIALCCCLPCIIALL---YAVAGTEGVSEAELGVLPLYKFKAFHSNEK 304

Query: 342 DGGSEAGVVAAGTD-----KERVISGEDAVCCICLAKYANNDELRELPCSHLFHKECVDK 401
           +      +V    +      ER +  EDA CCICL+ Y +  EL  LPC+H FH  C+ K
Sbjct: 305 NITGPGKMVPIPINGLCLATERTLLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVK 351

Query: 402 WLKINALCPLCKNEV 403
           WLK+ A CPLCK  +
Sbjct: 365 WLKMRATCPLCKYNI 351

[Close]

BLAST of Spo11266.1 vs. ExPASy Swiss-Prot
Match: RN165_HUMAN (RING finger protein 165 OS=Homo sapiens GN=RNF165 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.000e-12
Identity = 37/101 (36.63%), Postives = 53/101 (52.48%), Query Frame = 1


		  
Query: 306 NQTRGATTESINALPIYKYKLKKNRHSDGGSEAGVVAAGTDKERVISGEDAVCCICLAKY 365
           N TRGA   +I     + +K KK R  DG         G   E   S  D  C ICL+  
Sbjct: 251 NVTRGAVQNTIERFT-FPHKYKKRRPQDG--------KGKKDEGEESDTDEKCTICLSML 310

Query: 366 ANNDELRELPCSHLFHKECVDKWLKINALCPLCKNEVGDSL 407
            + +++R LPC HLFH+ CVD+WL ++  CP+C+ ++   L
Sbjct: 311 EDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIETQL 342

[Close]

BLAST of Spo11266.1 vs. TAIR (Arabidopsis)
Match: AT4G32600.1 (RING/U-box superfamily protein)

HSP 1 Score: 482.6 bits (1241), Expect = 2.400e-136
Identity = 258/407 (63.39%), Postives = 303/407 (74.45%), Query Frame = 1


		  
Query: 7   EYQCKSQSDKYPLLMEQPERRN--DNEHVI-DIRRSLEASSSGAAHDRISNELNSTLPEG 66
           +++  +Q+D +   ME+    N   NEH+I DI R+   +SS ++HDRISN L     E 
Sbjct: 9   QHRITNQADTFSRFMERSPENNLSRNEHIIIDIPRNAAIASSSSSHDRISNVLEPLQHEE 68

Query: 67  RPSSTSRASVSQLSLPLSNISSSRNSSSRRGNGHS-RRRRSPLNSGVWISVELALTLGQI 126
              ST    VS ++ P    +++ +SSS R N  S RRRRSPLNSG+WIS+EL LT+GQI
Sbjct: 69  ERPST----VSPMAAPQPATATASSSSSMRSNPRSVRRRRSPLNSGLWISIELFLTVGQI 128

Query: 127 VASVIVLSLSRHEHPRTPLFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQPSS 186
           +A+++VLSLS+HEHPR PLF WIVGYA GCVATLPLLYWRY H NQASEQDS   R   +
Sbjct: 129 IAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYYHSNQASEQDSGQHRPNLN 188

Query: 187 SGNPPVGHSSSLTTQILEDDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFFAIW 246
               P   S S T++   D   T  ++   S     +  ARLKV VEYFKMALDCFFA+W
Sbjct: 189 VAAGPFAFSISRTSEA--DGRQTNTTSSRGSRYPGFISAARLKVIVEYFKMALDCFFAVW 248

Query: 247 FVVGNVWIFGGHASSTEAPNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVLGFR 306
           FVVGNVWIFGGH+S+ EAPNLYRLC+VFL FSCIGYAMPFILC TICCCLPCIIS+LG+R
Sbjct: 249 FVVGNVWIFGGHSSAAEAPNLYRLCLVFLTFSCIGYAMPFILCTTICCCLPCIISILGYR 308

Query: 307 EDLNQTRGATTESINALPIYKYKLKKNRHS--DGG---SEAGVVAAGTDKERVISGEDAV 366
           EDL Q RGAT ESINALP +K+KLKK+R +  D G   SE GVVAAGTD ER ISGEDAV
Sbjct: 309 EDLTQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSEGGVVAAGTDNERAISGEDAV 368

Query: 367 CCICLAKYANNDELRELPCSHLFHKECVDKWLKINALCPLCKNEVGD 405
           CCICLAKYANN+ELRELPCSH FHKECVDKWLKINA CPLCK+EVG+
Sbjct: 369 CCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEVGE 409

[Close]

BLAST of Spo11266.1 vs. TAIR (Arabidopsis)
Match: AT1G80400.1 (RING/U-box superfamily protein)

HSP 1 Score: 403.3 bits (1035), Expect = 1.900e-112
Identity = 209/400 (52.25%), Postives = 281/400 (70.25%), Query Frame = 1


		  
Query: 14  SDKYPLLMEQPERRNDNEHVIDIRRSLEA-SSSGAAHDRISNELNSTLPEGRPSSTSRAS 73
           +D+ PLLM+   R    EH++DI  + E  SSS ++ D ++ + NS   E    S+S A+
Sbjct: 13  TDQDPLLMDHGNR----EHIVDITSNDEEDSSSRSSLDELTPQGNSHQGEETVLSSSNAT 72

Query: 74  VSQLSLPLSNISSSRNSSSRRG-NGHSRRRRSPLNSGVWISVELALTLGQIVASVIVLSL 133
               + P  +    R +SSRRG NG+ RR RSPLNSG+WISVEL +T+ QIVA+++V+ L
Sbjct: 73  QQHPTHP--SPPQQRPTSSRRGDNGNGRRTRSPLNSGLWISVELVVTVAQIVAAIVVMVL 132

Query: 134 SRHEHPRTPLFAWIVGYATGCVATLPLLYWRYLHRNQASEQDSSPSRQPSSSGNPPVGHS 193
           ++ EHP  PLF W++GY  GC+ATLP+LYWR+   N+A+ QDSS     S   +    ++
Sbjct: 133 AKDEHPEAPLFTWVIGYTCGCLATLPILYWRFRTYNRATGQDSSQRATSSQGNSESTPYT 192

Query: 194 SSLTTQILEDDNHTTISNRSASGLSVAMGNARLKVSVEYFKMALDCFFAIWFVVGNVWIF 253
           +    Q  +++N T +S    +         RL   V++FKMA+DCFFA+WFVVGNVWIF
Sbjct: 193 AVSVAQAADEENSTGVSAAPRNNQVGESLRTRLNGLVDHFKMAIDCFFAVWFVVGNVWIF 252

Query: 254 GGHASSTEAPNLYRLCIVFLVFSCIGYAMPFILCATICCCLPCIISVLGFREDLNQTRGA 313
           GGH+S +++P LYRLCI FL FSCIGYAMPFILCATICCCLPC+ISVLGFRE+ +QTRGA
Sbjct: 253 GGHSSPSDSPKLYRLCIAFLTFSCIGYAMPFILCATICCCLPCLISVLGFRENFSQTRGA 312

Query: 314 TTESINALPIYKYKLKKNRHSDGG--SEAGVVAAGTDKERVISGEDAVCCICLAKYANND 373
           T E+INALP+Y++K K     +     E G +  G+ K+R+ISGEDA CCICL +Y +++
Sbjct: 313 TAEAINALPVYRFKSKSRNDLEFSEEGEGGFLLLGSQKKRLISGEDASCCICLTRYGDDE 372

Query: 374 ELRELPCSHLFHKECVDKWLKINALCPLCKNEVGDSLLSS 410
           ++RELPCSH+FH +CVDKWLKINA CPLCKNEVG+S  +S
Sbjct: 373 QVRELPCSHVFHVDCVDKWLKINATCPLCKNEVGESSSAS 406

[Close]

BLAST of Spo11266.1 vs. TAIR (Arabidopsis)
Match: AT4G26580.1 (RING/U-box superfamily protein)

HSP 1 Score: 171.8 bits (434), Expect = 9.200e-43
Identity = 122/372 (32.80%), Postives = 183/372 (49.19%), Query Frame = 1


		  
Query: 39  SLEASSSGAAHDRISNELNSTLPEGRPSST------SRASVSQLSLPLSNISSSRNSSSR 98
           S+  SSS +      ++   T PE  PSS+       R S ++  + L  +   +N+S  
Sbjct: 16  SITVSSSSSFASTQLDDNTHTAPESSPSSSFFMRLAMRVSRARWFIFLRRVFHYQNAS-- 75

Query: 99  RGNGHSRRRRSPLNSGVWISVELALTLGQIVASVIVLSLSRHEHPRTPLFAWIVGYATGC 158
                S    +P NS  W+  EL   L QI      L+LS++E P  P+  WI GY  GC
Sbjct: 76  ----RSDLGTNPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRLWITGYNVGC 135

Query: 159 VATLPLLYWRYLHRNQASEQDSSPSRQPSSSGNPPVGHSSSLTTQILEDDNHTTISNRSA 218
           +  L LLY RY       +QD+S              H ++ +   +E       S    
Sbjct: 136 LLNLMLLYGRY------RQQDTS--------------HENAFSFGDIEQQQR---SREET 195

Query: 219 SGLSVAMGNARLKVSVEYFKMALDCFFAIWFVVGNVWIFGGHASSTE-APNLYRLCIVFL 278
           +  S  M   R          +L+ FFAIWFV+GNVW+F     S   AP L+ LCI  L
Sbjct: 196 TRCSHLMNKCRT---------SLELFFAIWFVIGNVWVFDSRFGSFHYAPILHVLCISLL 255

Query: 279 VFSCIGYAMPFILCATICCCLPCIISVLGFREDLNQT-RGATTESINALPIYKYKLKKNR 338
            ++ + Y+ PF+L   +CC +P + S LG+  ++  + +GA+ + I++LP +KYKL    
Sbjct: 256 AWNALCYSFPFLLFLLLCCVVPLVSSFLGYNMNVGSSEKGASDDQISSLPSWKYKL---- 315

Query: 339 HSDGGSEAGVVAAGTDKERVISGEDAVCCICLAKYANNDELRELPCSHLFHKECVDKWLK 398
                     +   +D  +  +  D  CCICLAKY   +E+R+LPCSH FH +CVD+WL+
Sbjct: 316 ----------IDETSDSSQ--ANNDPECCICLAKYKEKEEVRKLPCSHRFHLKCVDQWLR 333

Query: 399 INALCPLCKNEV 403
           I + CPLCK ++
Sbjct: 376 IISCCPLCKQDL 333

[Close]

BLAST of Spo11266.1 vs. TAIR (Arabidopsis)
Match: AT4G11680.1 (Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 155.6 bits (392), Expect = 6.800e-38
Identity = 104/302 (34.44%), Postives = 150/302 (49.67%), Query Frame = 1


		  
Query: 111 ISVELALTLGQIVASVIVLSLSRHEHPRTPLFAWIVGYATGCVATLPLLYWRYLHRNQAS 170
           + +++   L  +   V VL LSR E P  PL  W+VGY   C   +  +   Y  R +  
Sbjct: 110 VFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRR- 169

Query: 171 EQDSSPSRQPSSSGNPPVGHSSS---LTTQILEDDNHTTISNRSASGLSVAMGNARLKVS 230
                  R P   G   + +SSS   ++   LED   T  SN +                
Sbjct: 170 -------RHPEDGGGSGLTNSSSQQYVSLAQLEDRGET--SNPA---------------- 229

Query: 231 VEYFKMALDCFFAIWFVVGNVWIF-GGHASSTEAPNLYRLCIVFLVFS------CIGYAM 290
            ++ + A   F  IW+++G  W+  GG   S+++P LY LCI+FL F       C+  A+
Sbjct: 230 -KHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCV--AL 289

Query: 291 PFILCATICCCLPCIISVLGFREDLNQTRGATTESINALPIYKYKLKKNRHSDGGSEAGV 350
             ++   +CCCLPCII++L    D     GA+   I+ +P +++    N     G   G+
Sbjct: 290 ACVIGLAVCCCLPCIIAILYAVAD---QEGASKNDIDQMPKFRFTKTGNVEKLSGKARGI 349

Query: 351 VA-AGTDK--ERVISGEDAVCCICLAKYANNDELRELPCSHLFHKECVDKWLKINALCPL 400
           +   GTD   ER +S EDA CCICL +Y +  ELRELPC+H FH  C+DKWL IN+ CPL
Sbjct: 350 MTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPL 379

[Close]

BLAST of Spo11266.1 vs. TAIR (Arabidopsis)
Match: AT1G63170.1 (Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 155.2 bits (391), Expect = 8.900e-38
Identity = 106/310 (34.19%), Postives = 148/310 (47.74%), Query Frame = 1


		  
Query: 111 ISVELALTLGQIVASVIVLSLSRHEHPRTPLFAWIVGYATGCVATLPLLYWRYLHRNQAS 170
           + ++    L  +V +  VL LS  E+P  PL  WI+GY   C+  +  +   Y  RN   
Sbjct: 75  VVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRR 134

Query: 171 EQDSSP-SRQPSSSGNPPVGHSSSLTTQILEDDNHTTISNRSASGLSVAMGNARLKVSVE 230
            +D SP S   SSS +  +     L      D+ +  +        S A          +
Sbjct: 135 RRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFA----------K 194

Query: 231 YFKMALDCFFAIWFVVGNVWIF-GGHASSTEAPNLYRLCIVFLVFS------CIGYAMPF 290
           + + A      IW+V+G  W+  GG   +  +P LY LCIVFL F       C+  A+  
Sbjct: 195 HLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCV--ALAC 254

Query: 291 ILCATICCCLPCIISVLGFREDLNQTRGATTESINALPIYKY-------KLKKNRHSDGG 350
           ++   +CCCLPCII+VL     + +  GA+ E I+ L  +K+       K   +     G
Sbjct: 255 VIGIAVCCCLPCIIAVL---YAVAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQG 314

Query: 351 SEAGVVA-AGTDK--ERVISGEDAVCCICLAKYANNDELRELPCSHLFHKECVDKWLKIN 403
              GV+   GTD   E  +  EDA CCICL+ Y +  ELRELPC H FH  CVDKWL IN
Sbjct: 315 DSGGVMTECGTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYIN 369

The following BLAST results are available for this feature:

BLAST of Spo11266.1 vs. NCBI nr
BLAST of Spo11266.1 vs. UniProtKB/TrEMBL
BLAST of Spo11266.1 vs. ExPASy Swiss-Prot
BLAST of Spo11266.1 vs. TAIR (Arabidopsis)

BLAST of Spo11266.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902232755\|gb\|KNA22784.1\|	2.8e-227	100.	hypothetical protein SOVF_0312...	[more]
gi\|731320355\|ref\|XP_010670760.1\|	8.8e-205	85.5	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|359476391\|ref\|XP_002284536.2\|	2.4e-154	68.7	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|743814499\|ref\|XP_011019728.1\|	1.3e-152	68.8	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|566178249\|ref\|XP_002309588.2\|	1.5e-151	68.5	zinc finger family protein [Po...	[more]

BLAST of Spo11266.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RV36_SPIOL	2.0e-227	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CY76_BETVU	6.2e-205	85.5	Uncharacterized protein OS=Bet...	[more]
B9H9P9_POPTR	1.0e-151	68.5	Zinc finger family protein OS=...	[more]
M5XYE2_PRUPE	1.1e-150	68.5	Uncharacterized protein OS=Pru...	[more]
D7SUI3_VITVI	8.2e-149	69.1	Putative uncharacterized prote...	[more]

BLAST of Spo11266.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RING4_ARATH	1.2e-36	34.4	E3 ubiquitin-protein ligase At...	[more]
RING2_ARATH	1.6e-36	34.1	E3 ubiquitin-protein ligase At...	[more]
RING1_ARATH	2.1e-36	31.3	E3 ubiquitin-protein ligase At...	[more]
RIE1_ARATH	1.3e-25	27.7	E3 ubiquitin protein ligase RI...	[more]
RN165_HUMAN	6.0e-12	36.6	RING finger protein 165 OS=Hom...	[more]

BLAST of Spo11266.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT4G32600.1	2.4e-136	63.3	RING/U-box superfamily protein	[more]
AT1G80400.1	1.9e-112	52.2	RING/U-box superfamily protein	[more]
AT4G26580.1	9.2e-43	32.8	RING/U-box superfamily protein	[more]
AT4G11680.1	6.8e-38	34.4	Zinc finger, C3HC4 type (RING ...	[more]
AT1G63170.1	8.9e-38	34.1	Zinc finger, C3HC4 type (RING ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 358..399 score: 4.5
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 358..398 score: 5.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 358..399 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 354..402 score: 7.7
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 353..424 score: 2.0E-214coord: 1..332 score: 2.0E
None	No IPR available	PANTHER	PTHR14155:SF143	C3H4 TYPE ZINC FINGER PROTEIN	coord: 353..424 score: 2.0E-214coord: 1..332 score: 2.0E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 350..403 score: 1.19

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding