Spo11288.1 (mRNA) | SpinachBase

Overview


Name	Spo11288.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	U11/U12 small nuclear ribonucleoprotein 25 kDa-like protein
Location	SpoScf_02295 : 2807 .. 3329 (-)
Sequence length	429

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATGGAGTGAGAAGAACGAGGGCTCAACTCCGGGCGGCAGAGGCGGAGAAGGTGGTGGTGGAGGCGGAGGCGTAGTATACTGCAGTGAGAACGCGAAAAGGGCAAAGCTGAATTCAACGTTAGCCGCATTACTAGATGACCCCATTCTCTCAGATGTCCCAAAGAAGCCATCTTTATCCGATGTCGACACCCTTATCAGCTTAGAGCTCGGAAGTGCCATGCGTATCTCTGTACTCAAGCTCGACTCCACCTCCTTTGGTATTTTCTCTCTCTTCTTTCTCTCAAGAATTTTCACAAACAGTTGGTGTGCATTTTCATTTTTTACGAGCTTTTTGCTGTCTCATTTTTCTAGATGTTGTGGTCATGAATTCGGCTACGGTGAAGGATTTGAAACTGTGTATTAAGAAGAAAGTTACTGAAATGGAACAATCACAGATGGGTCATCGTCATATTTCTTGGTACTACTCTCTTTCTTGTTTCTTAGACTTTCTCTTTGGAGTATTTTTCGTGATTGTATAG

mRNA sequence

ATGGAATGGAGTGAGAAGAACGAGGGCTCAACTCCGGGCGGCAGAGGCGGAGAAGGTGGTGGTGGAGGCGGAGGCGTAGTATACTGCAGTGAGAACGCGAAAAGGGCAAAGCTGAATTCAACGTTAGCCGCATTACTAGATGACCCCATTCTCTCAGATGTCCCAAAGAAGCCATCTTTATCCGATGTCGACACCCTTATCAGCTTAGAGCTCGGAAGTGCCATGCGTATCTCTGTACTCAAGCTCGACTCCACCTCCTTTGATGTTGTGGTCATGAATTCGGCTACGGTGAAGGATTTGAAACTGTGTATTAAGAAGAAAGTTACTGAAATGGAACAATCACAGATGGGTCATCGTCATATTTCTTGGTACTACTCTCTTTCTTGTTTCTTAGACTTTCTCTTTGGAGTATTTTTCGTGATTGTATAG

Coding sequence (CDS)

ATGGAATGGAGTGAGAAGAACGAGGGCTCAACTCCGGGCGGCAGAGGCGGAGAAGGTGGTGGTGGAGGCGGAGGCGTAGTATACTGCAGTGAGAACGCGAAAAGGGCAAAGCTGAATTCAACGTTAGCCGCATTACTAGATGACCCCATTCTCTCAGATGTCCCAAAGAAGCCATCTTTATCCGATGTCGACACCCTTATCAGCTTAGAGCTCGGAAGTGCCATGCGTATCTCTGTACTCAAGCTCGACTCCACCTCCTTTGATGTTGTGGTCATGAATTCGGCTACGGTGAAGGATTTGAAACTGTGTATTAAGAAGAAAGTTACTGAAATGGAACAATCACAGATGGGTCATCGTCATATTTCTTGGTACTACTCTCTTTCTTGTTTCTTAGACTTTCTCTTTGGAGTATTTTTCGTGATTGTATAG

Protein sequence

MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRHISWYYSLSCFLDFLFGVFFVIV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo11288	Spo11288	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo11288.1	Spo11288.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11288.1.CDS.2	Spo11288.1.CDS.2	CDS
Spo11288.1.CDS.1	Spo11288.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11288.1.exon.2	Spo11288.1.exon.2	exon
Spo11288.1.exon.1	Spo11288.1.exon.1	exon

Homology

[Close]

BLAST of Spo11288.1 vs. NCBI nr
Match: gi|902143828|gb|KNA04876.1| (hypothetical protein SOVF_195630 [Spinacia oleracea])

HSP 1 Score: 271.2 bits (692), Expect = 1.100e-69
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1


		  
Query: 1   MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL 60
           MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL
Sbjct: 1   MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL 60

Query: 61  SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRH 120
           SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRH
Sbjct: 61  SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRH 120

Query: 121 ISWYYSLSCFLDFLFGVFFVIV 143
           ISWYYSLSCFLDFLFGVFFVIV
Sbjct: 121 ISWYYSLSCFLDFLFGVFFVIV 142

[Close]

BLAST of Spo11288.1 vs. NCBI nr
Match: gi|731361663|ref|XP_010692484.1| (PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 165.2 bits (417), Expect = 8.100e-38
Identity = 95/127 (74.80%), Postives = 101/127 (79.53%), Query Frame = 1


		  
Query: 1   MEWSEKNEGSTPGGRG----GEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPK 60
           MEWSEK E S          GEG GG     Y +EN KRA+LNSTL+ALLDDPIL+DVPK
Sbjct: 1   MEWSEKKEDSASASASSSWVGEGLGG-----YNNENVKRARLNSTLSALLDDPILADVPK 60

Query: 61  KPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSQM 120
           KPSLSDVDTLIS ELGSAMRIS+LKLDSTSFDVVVMNS TVKDLKL I KKV +MEQSQM
Sbjct: 61  KPSLSDVDTLISFELGSAMRISILKLDSTSFDVVVMNSDTVKDLKLAIIKKVNQMEQSQM 120

Query: 121 GHRHISW 124
           GHR ISW
Sbjct: 121 GHRQISW 122

[Close]

BLAST of Spo11288.1 vs. NCBI nr
Match: gi|976920429|gb|KVI05156.1| (hypothetical protein Ccrd_016473 [Cynara cardunculus var. scolymus])

HSP 1 Score: 164.1 bits (414), Expect = 1.800e-37
Identity = 82/100 (82.00%), Postives = 92/100 (92.00%), Query Frame = 1


		  
Query: 28  YCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSF 87
           Y S N K+AKLNSTLAALLDDP+L+DVPKKP+LSDVDTLISLELGSAMR+SVLKLD+TSF
Sbjct: 36  YNSNNVKKAKLNSTLAALLDDPVLADVPKKPTLSDVDTLISLELGSAMRVSVLKLDNTSF 95

Query: 88  DVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRHISWYYSL 128
           DV +MNSATVKDLKL IKKK+ EMEQS+MGHRHISW+  L
Sbjct: 96  DVALMNSATVKDLKLAIKKKINEMEQSKMGHRHISWFVPL 135

[Close]

BLAST of Spo11288.1 vs. NCBI nr
Match: gi|590594717|ref|XP_007017930.1| (Ubiquitin-like superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 159.5 bits (402), Expect = 4.500e-36
Identity = 81/98 (82.65%), Postives = 89/98 (90.82%), Query Frame = 1


		  
Query: 26  VVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDST 85
           V Y + N K+AKL+STLAALLDDPIL+DVPKKP+LSDVDTLISLELGSAMRIS+LKLD T
Sbjct: 172 VGYNNNNVKKAKLHSTLAALLDDPILADVPKKPTLSDVDTLISLELGSAMRISILKLDGT 231

Query: 86  SFDVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRHISW 124
           SFD+ VMNSATVKDLKL IKKKV E EQS+MGHRHISW
Sbjct: 232 SFDIAVMNSATVKDLKLAIKKKVIEFEQSKMGHRHISW 269

[Close]

BLAST of Spo11288.1 vs. NCBI nr
Match: gi|590594714|ref|XP_007017929.1| (Ubiquitin-like superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 159.5 bits (402), Expect = 4.500e-36
Identity = 81/98 (82.65%), Postives = 89/98 (90.82%), Query Frame = 1


		  
Query: 26  VVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDST 85
           V Y + N K+AKL+STLAALLDDPIL+DVPKKP+LSDVDTLISLELGSAMRIS+LKLD T
Sbjct: 234 VGYNNNNVKKAKLHSTLAALLDDPILADVPKKPTLSDVDTLISLELGSAMRISILKLDGT 293

Query: 86  SFDVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRHISW 124
           SFD+ VMNSATVKDLKL IKKKV E EQS+MGHRHISW
Sbjct: 294 SFDIAVMNSATVKDLKLAIKKKVIEFEQSKMGHRHISW 331

[Close]

BLAST of Spo11288.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEA8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_195630 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 7.300e-70
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1


		  
Query: 1   MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL 60
           MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL
Sbjct: 1   MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL 60

Query: 61  SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRH 120
           SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRH
Sbjct: 61  SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRH 120

Query: 121 ISWYYSLSCFLDFLFGVFFVIV 143
           ISWYYSLSCFLDFLFGVFFVIV
Sbjct: 121 ISWYYSLSCFLDFLFGVFFVIV 142

[Close]

BLAST of Spo11288.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BI80_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g020500 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 5.700e-38
Identity = 95/127 (74.80%), Postives = 101/127 (79.53%), Query Frame = 1


		  
Query: 1   MEWSEKNEGSTPGGRG----GEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPK 60
           MEWSEK E S          GEG GG     Y +EN KRA+LNSTL+ALLDDPIL+DVPK
Sbjct: 1   MEWSEKKEDSASASASSSWVGEGLGG-----YNNENVKRARLNSTLSALLDDPILADVPK 60

Query: 61  KPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSQM 120
           KPSLSDVDTLIS ELGSAMRIS+LKLDSTSFDVVVMNS TVKDLKL I KKV +MEQSQM
Sbjct: 61  KPSLSDVDTLISFELGSAMRISILKLDSTSFDVVVMNSDTVKDLKLAIIKKVNQMEQSQM 120

Query: 121 GHRHISW 124
           GHR ISW
Sbjct: 121 GHRQISW 122

[Close]

BLAST of Spo11288.1 vs. UniProtKB/TrEMBL
Match: A0A103Y9T9_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_016473 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.300e-37
Identity = 82/100 (82.00%), Postives = 92/100 (92.00%), Query Frame = 1


		  
Query: 28  YCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSF 87
           Y S N K+AKLNSTLAALLDDP+L+DVPKKP+LSDVDTLISLELGSAMR+SVLKLD+TSF
Sbjct: 36  YNSNNVKKAKLNSTLAALLDDPVLADVPKKPTLSDVDTLISLELGSAMRVSVLKLDNTSF 95

Query: 88  DVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRHISWYYSL 128
           DV +MNSATVKDLKL IKKK+ EMEQS+MGHRHISW+  L
Sbjct: 96  DVALMNSATVKDLKLAIKKKINEMEQSKMGHRHISWFVPL 135

[Close]

BLAST of Spo11288.1 vs. UniProtKB/TrEMBL
Match: A0A061FL17_THECC (Ubiquitin-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_034316 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.100e-36
Identity = 81/98 (82.65%), Postives = 89/98 (90.82%), Query Frame = 1


		  
Query: 26  VVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDST 85
           V Y + N K+AKL+STLAALLDDPIL+DVPKKP+LSDVDTLISLELGSAMRIS+LKLD T
Sbjct: 234 VGYNNNNVKKAKLHSTLAALLDDPILADVPKKPTLSDVDTLISLELGSAMRISILKLDGT 293

Query: 86  SFDVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRHISW 124
           SFD+ VMNSATVKDLKL IKKKV E EQS+MGHRHISW
Sbjct: 294 SFDIAVMNSATVKDLKLAIKKKVIEFEQSKMGHRHISW 331

[Close]

BLAST of Spo11288.1 vs. UniProtKB/TrEMBL
Match: A0A061FCZ7_THECC (Ubiquitin-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_034316 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.100e-36
Identity = 81/98 (82.65%), Postives = 89/98 (90.82%), Query Frame = 1


		  
Query: 26  VVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDST 85
           V Y + N K+AKL+STLAALLDDPIL+DVPKKP+LSDVDTLISLELGSAMRIS+LKLD T
Sbjct: 172 VGYNNNNVKKAKLHSTLAALLDDPILADVPKKPTLSDVDTLISLELGSAMRISILKLDGT 231

Query: 86  SFDVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRHISW 124
           SFD+ VMNSATVKDLKL IKKKV E EQS+MGHRHISW
Sbjct: 232 SFDIAVMNSATVKDLKLAIKKKVIEFEQSKMGHRHISW 269

[Close]

BLAST of Spo11288.1 vs. ExPASy Swiss-Prot
Match: U1125_ARATH (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana GN=SNRNP25 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.400e-29
Identity = 68/97 (70.10%), Postives = 79/97 (81.44%), Query Frame = 1


		  
Query: 34  KRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMN 93
           KR KL S L+ LL DPIL+DVP+ P+LSDV TL+SLE GSAMR+SV+KLD +S DV VMN
Sbjct: 11  KREKLKSVLSQLLADPILADVPRNPTLSDVVTLVSLEKGSAMRLSVVKLDGSSLDVAVMN 70

Query: 94  SATVKDLKLCIKKKVTEMEQSQMGHRHISWYYSLSCF 131
           SAT+KDLKL IKKKV EMEQ+ MGHRHISW +  S F
Sbjct: 71  SATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNF 107

[Close]

BLAST of Spo11288.1 vs. ExPASy Swiss-Prot
Match: SNR25_HUMAN (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens GN=SNRNP25 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.900e-10
Identity = 36/84 (42.86%), Postives = 55/84 (65.48%), Query Frame = 1


		  
Query: 42  LAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLK 101
           LA ++ DP+L D+P + +L +V++ I+LE G AM + V K+D     VVV+ SATV DLK
Sbjct: 8   LAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATVLDLK 67

Query: 102 LCIKKKVTEMEQSQMGHRHISWYY 126
             I++ V   ++ + G +HISW Y
Sbjct: 68  KAIQRYVQLKQEREGGIQHISWSY 91

[Close]

BLAST of Spo11288.1 vs. ExPASy Swiss-Prot
Match: SNR25_MOUSE (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus GN=Snrnp25 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.700e-9
Identity = 33/81 (40.74%), Postives = 53/81 (65.43%), Query Frame = 1


		  
Query: 45  LLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCI 104
           ++ DP+L D+P + +L +V++ I+LE G AM + V K+D     VVV+ +ATV DLK  I
Sbjct: 2   VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61

Query: 105 KKKVTEMEQSQMGHRHISWYY 126
           ++ V   ++ + G +HISW Y
Sbjct: 62  QRYVQLKQEREGGVQHISWSY 82

[Close]

BLAST of Spo11288.1 vs. ExPASy Swiss-Prot
Match: SNR25_BOVIN (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus GN=SNRNP25 PE=2 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 2.700e-9
Identity = 33/81 (40.74%), Postives = 53/81 (65.43%), Query Frame = 1


		  
Query: 45  LLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCI 104
           ++ DP+L D+P + +L +V++ I+LE G AM + V K+D     VVV+ +ATV DLK  I
Sbjct: 2   VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61

Query: 105 KKKVTEMEQSQMGHRHISWYY 126
           ++ V   ++ + G +HISW Y
Sbjct: 62  QRYVQLRQEREGGIQHISWSY 82

[Close]

BLAST of Spo11288.1 vs. TAIR (Arabidopsis)
Match: AT3G07860.1 (Ubiquitin-like superfamily protein)

HSP 1 Score: 129.8 bits (325), Expect = 1.300e-30
Identity = 68/97 (70.10%), Postives = 79/97 (81.44%), Query Frame = 1


		  
Query: 34  KRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMN 93
           KR KL S L+ LL DPIL+DVP+ P+LSDV TL+SLE GSAMR+SV+KLD +S DV VMN
Sbjct: 11  KREKLKSVLSQLLADPILADVPRNPTLSDVVTLVSLEKGSAMRLSVVKLDGSSLDVAVMN 70

Query: 94  SATVKDLKLCIKKKVTEMEQSQMGHRHISWYYSLSCF 131
           SAT+KDLKL IKKKV EMEQ+ MGHRHISW +  S F
Sbjct: 71  SATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNF 107

The following BLAST results are available for this feature:

BLAST of Spo11288.1 vs. NCBI nr
BLAST of Spo11288.1 vs. UniProtKB/TrEMBL
BLAST of Spo11288.1 vs. ExPASy Swiss-Prot
BLAST of Spo11288.1 vs. TAIR (Arabidopsis)

BLAST of Spo11288.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902143828\|gb\|KNA04876.1\|	1.1e-69	100.	hypothetical protein SOVF_1956...	[more]
gi\|731361663\|ref\|XP_010692484.1\|	8.1e-38	74.8	PREDICTED: U11/U12 small nucle...	[more]
gi\|976920429\|gb\|KVI05156.1\|	1.8e-37	82.0	hypothetical protein Ccrd_0164...	[more]
gi\|590594717\|ref\|XP_007017930.1\|	4.5e-36	82.6	Ubiquitin-like superfamily pro...	[more]
gi\|590594714\|ref\|XP_007017929.1\|	4.5e-36	82.6	Ubiquitin-like superfamily pro...	[more]

BLAST of Spo11288.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QEA8_SPIOL	7.3e-70	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BI80_BETVU	5.7e-38	74.8	Uncharacterized protein OS=Bet...	[more]
A0A103Y9T9_CYNCS	1.3e-37	82.0	Uncharacterized protein OS=Cyn...	[more]
A0A061FL17_THECC	3.1e-36	82.6	Ubiquitin-like superfamily pro...	[more]
A0A061FCZ7_THECC	3.1e-36	82.6	Ubiquitin-like superfamily pro...	[more]

BLAST of Spo11288.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 4


Match Name	E-value	Identity	Description
U1125_ARATH	2.4e-29	70.1	U11/U12 small nuclear ribonucl...	[more]
SNR25_HUMAN	1.9e-10	42.8	U11/U12 small nuclear ribonucl...	[more]
SNR25_MOUSE	2.7e-9	40.7	U11/U12 small nuclear ribonucl...	[more]
SNR25_BOVIN	2.7e-9	40.7	U11/U12 small nuclear ribonucl...	[more]

BLAST of Spo11288.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G07860.1	1.3e-30	70.1	Ubiquitin-like superfamily pro...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 69..125 score: 4.9
None	No IPR available	PANTHER	PTHR14942	FAMILY NOT NAMED	coord: 28..125 score: 2.0

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006626	protein targeting to mitochondrion