Spo11446.1 (mRNA) | SpinachBase

Overview


Name	Spo11446.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Chaperonin 10 family protein
Location	SpoScf_00676 : 203050 .. 206611 (-)
Sequence length	1085

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTAATCCTCGAACTTTCCAGAAGCAGTGCCCCACCCGAAAAATCAACGGCCAGTTATTATCTTTCAACAATCCATCAAACATATCACCACAAACAATCAACGGTTTGAAATTAAACTACCCATCCTTACTCTCTCTAAATAAAGCTTTACCAAACAGCAAACACGGCGTTACCGTTTTAACTCCTCTCTTTCTCACTCGCGCACACACACTCTTTCTCTCTCCTCCCAACTTATCCATGGCTTCCACCGCTGCATTCGTCTCTTTGGCAAAACCCTTCTCTTTACCCAACAACACTTTTTCTCGCAACTCTAATCTAAGATTATTGGGTACATTTTTATTTGTTGTTTGAATTTCATTTTGCAATTTAAATATCTGATTTATTAATTGTTAGAAGCTATTTTTACCTGAATTGCTTACCCATTTTCTGATTTATTTCCAGGTTCAAGAAGAAATGCCCTTACAGTTAATGCGGTTGCTACAAAATGGGAACCCAGTAAGGTAATTTTCCTTTCTCTTACTTTTTATTTTGATCTGGGGGTTGATTAAAATTTGAGGTATTAATTCTTAATTTAAATATTGTATGTTTTTGGTAGGTTGTTCCACAGGGTGATGGAGTTTTGATTCGACTTGAGGAGCTTCCTGAGGTATAATCTAATTTATGTTTTAGCTATTTCGTAGTGTTACACTGTTCTAGTTAATGTTAATATGGAAATTTTGATGTTTTTTGGTTCTTTTTGTACAAAACAATATGATGATATAATCATATAATTCTCGTATTAAATGATTAGGGTTTTATCAATTAAATTTGTTCAAAATTTATCCCTTTGCTTGATATTTTATAAAAATCTAGTACAGAATCAAAATGGTTTGGTAGTTTTATTGCCCGTGAAGAATTATCTAAAGCAATGTAGATGACAAAATGGCTTAAACACATACACACTGAAGATAGAAACCGTTATAAGTGATTTCCTCTTCAATGGCATTGTTCGTAGACGAAAAAGAATGTTCTGATGATGGTACTAACTATGGTACTATTACATTACTACTAACCAATCTAAAGGAACACAAGGTCAGTCTATACGAGACTTTTGATGCGTTCCTAAAAATATTTCATTCTTTTTTTAAGGAATGTAATAGTGTTGCTGTCACGATTAGCTAGCTTTAGTTCTTCAAAGATGATATTGTGATACTTTACTGTGGATAGCGAAAGCCAGAAGAACATTTTGTATTGAAAACTTGCTTCTGACCTCCTTTTAGGGCTACTTATCATGCTTTTTTAGGGGTTATTTAAAGTTCCCGAAGTTACCAAATACAAGTAGTTATCAGTTATCAATACTTGTTGGTGTCTCTGCAAGCCTATTCTCCAAATAATAGGACATCGTCTAAGTTCCTTCTAGAACTGTGTAGGTGACGTATTTGAATCTGTTGGCGTATTTACTTGGTTGACGTCTACACAACACTTGAGAGAACTTTAAATATTTCTCCATTCAAATATAGCTGTTCATTATTGTACAAATTTGAAAAAAAAAGTAGCTAGAGCAAAAGTTTCAACACGTGTTAATCCTTAAGGAGTCTTTAAAGTTGTATCAGCTACTATTGCTGATTATGATATCGCTTATTTGTGTGAAATATTATTAGAAATCAGTCGGTGGAGTTCTTTGGCCTAAGTCAGCAGTGAAGTTGACAAATTGGCTTAAACACATGCACACTAAGAGTTCTAAATTTAATCAGGATAGAAACCGTAACAAGCGATATGCTCTTTAATGGCACCATTTATTGAAAGAAAAGAGACAATGCGATACTTAACTGTGAATAGTAAAAGCTTGCTTATTGGTGGTTATTTAAAGTTTCCGAAGTTATCATAGACGAAGTAGCTATCAGTTACATTGGAGGGGTATTTGTTGGTGTCTCCTCAAGCCTATTCTTAAAATACTAGGACCTTGTCTATGTCTGTTCTTCCTTTTGTACATTGGCTTAGCTGAAGCATTCTTAGTGCCATGCTTTTTGATATTGATGTTCAGGAGATCACCCTATGGACTATGGAACAAATTAGCCAACTCATATAAGTTGCTTCTAGAAATGCGTAGGTAAAGTATTTAATCTGTTGGCGTTTCCACTTGGTTGATGACACAATACTTGAGTGAGCTTTAAATGTTAATTATACAGGAACTTTATGTGGAGAAATATTTAATAAAAAAATAGTTAAATAATAATTCTAAAATATACATGCATGTACGGGACCTAATCTAGTACTATGTAGTTGTTTATGTAGCTTAGTGTTCTCTGCCAGTTTAAAACAAAAACAAGCTAGAGCAAAAGTTGCCTCGTACGTTACATATGGGAATCTTAAGGAGTGTATGAAGTTGTATCAGCTGATATTGCTGATTATGATATACAAATATGTAGGATTTGGAATTGGCAATAGCCTTTGGTGACTCCTGTCCTTGTCCTGGTCTGAAAGGCATCCTCACTCTAGCCTTTATAATGTTAAGAAGTTTACATACATTGCATTTGCATAAGATGTTTTTGAGATATTTTGTGTGACTAATTTGTTTGAAATGGTATTAGAAATCAGCTGGTGGAGTTCTTTTGCCCAAATCAGCAGTGAAATTTGAGAGGTACCTTATGGGTGAGGTATGGAAGTTCTGTTGTCTTGGACACTAATCCTTATTCCAAGCATTTGTTTTTATGAGCAAACTTTGAAGCCTTCTTCATGCTTACAGATTCTCTCCGTTGGGTCTGACGTTGGGGAAGTTGAGGCTGGGAAGAAGGTATAGCCAATTTGCCCTACTTGTTAGGCAACATAACACATGCAAAATGTGTCTTAAAACACCCTTATTGAGCAGACGAACGTTAATTTGTGTGTGCAGGTTCTTTTCTCAGACGTAAGTGCCTACGAGGTGGATCTAGGAGCAGAGGGTAGGCATTGTTTTTGCAAAGAAAGTGACCTCTTGGCAGTAGTTGAGTAGATCATTCAGAGGGCTTCACTTGATTTTACCATTAGACCCTTTTTTTAGTTAAAAATCAGAGTTTTCGTTTACAAAGATAGTCTTTTTGTTATTCTGCTTTATGTAAGCACCAAATTATTTTCAACCGTCAATGGGTTTTGAATTTTTGATTCTTGATGCAGCGGACAGGAATTGTGAAATGTGTTGATAGGGTAAATGCGAACAAATATGAAGTTTAAATCTCATTTGGAATGAATTCAAATGAAACTGATGCAGAGACATGCTTCCTTTGAACTTGGCCGTTTTTAAGGAATTTAGGATGTCCTGTCAAAAATCTTCAATCTTTTTTGATATTTGGGGTTCTGATTATGTCAACTGATAACGTCAAAGGGAAATTTGCATTAACTTTCAATTTCAGTAGCGAATTTAGCAGGGATCTCATTTTGAGGTTTCCTTCCCCAGTTCCCTATCAAAACTGATATTGGCGTAACCTTGAGTCCACGTGCCATAAAAAATATTTACTTTTCAATCGGTGTAGATAAGATTTGATCACCAGTTTTCAATATTCACAAATAGAGCAATATGAAATACTTCTTCCAATTTTTAAT

mRNA sequence

ATGAGCAAACACGGCGTTACCGTTTTAACTCCTCTCTTTCTCACTCGCGCACACACACTCTTTCTCTCTCCTCCCAACTTATCCATGGCTTCCACCGCTGCATTCGTCTCTTTGGCAAAACCCTTCTCTTTACCCAACAACACTTTTTCTCGCAACTCTAATCTAAGATTATTGGGTTCAAGAAGAAATGCCCTTACAGTTAATGCGGTTGCTACAAAATGGGAACCCAGTAAGGTTGTTCCACAGGGTGATGGAGTTTTGATTCGACTTGAGGAGCTTCCTGAGAAATCAGCTGGTGGAGTTCTTTTGCCCAAATCAGCAGTGAAATTTGAGAGGTACCTTATGGGTGAGATTCTCTCCGTTGGGTCTGACGTTGGGGAAGTTGAGGCTGGGAAGAAGGTTCTTTTCTCAGACGTAAGTGCCTACGAGGTGGATCTAGGAGCAGAGGGTAGGCATTGTTTTTGCAAAGAAAGTGACCTCTTGGCAGTAGTTGAGTAGATCATTCAGAGGGCTTCACTTGATTTTACCATTAGACCCTTTTTTTAGTTAAAAATCAGAGTTTTCGTTTACAAAGATAGTCTTTTTGTTATTCTGCTTTATGTAAGCACCAAATTATTTTCAACCGTCAATGGGTTTTGAATTTTTGATTCTTGATGCAGCGGACAGGAATTGTGAAATGTGTTGATAGGGTAAATGCGAACAAATATGAAGTTTAAATCTCATTTGGAATGAATTCAAATGAAACTGATGCAGAGACATGCTTCCTTTGAACTTGGCCGTTTTTAAGGAATTTAGGATGTCCTGTCAAAAATCTTCAATCTTTTTTGATATTTGGGGTTCTGATTATGTCAACTGATAACGTCAAAGGGAAATTTGCATTAACTTTCAATTTCAGTAGCGAATTTAGCAGGGATCTCATTTTGAGGTTTCCTTCCCCAGTTCCCTATCAAAACTGATATTGGCGTAACCTTGAGTCCACGTGCCATAAAAAATATTTACTTTTCAATCGGTGTAGATAAGATTTGATCACCAGTTTTCAATATTCACAAATAGAGCAATATGAAATACTTCTTCCAATTTTTAAT

Coding sequence (CDS)

ATGAGCAAACACGGCGTTACCGTTTTAACTCCTCTCTTTCTCACTCGCGCACACACACTCTTTCTCTCTCCTCCCAACTTATCCATGGCTTCCACCGCTGCATTCGTCTCTTTGGCAAAACCCTTCTCTTTACCCAACAACACTTTTTCTCGCAACTCTAATCTAAGATTATTGGGTTCAAGAAGAAATGCCCTTACAGTTAATGCGGTTGCTACAAAATGGGAACCCAGTAAGGTTGTTCCACAGGGTGATGGAGTTTTGATTCGACTTGAGGAGCTTCCTGAGAAATCAGCTGGTGGAGTTCTTTTGCCCAAATCAGCAGTGAAATTTGAGAGGTACCTTATGGGTGAGATTCTCTCCGTTGGGTCTGACGTTGGGGAAGTTGAGGCTGGGAAGAAGGTTCTTTTCTCAGACGTAAGTGCCTACGAGGTGGATCTAGGAGCAGAGGGTAGGCATTGTTTTTGCAAAGAAAGTGACCTCTTGGCAGTAGTTGAGTAG

Protein sequence

MSKHGVTVLTPLFLTRAHTLFLSPPNLSMASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLIRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGAEGRHCFCKESDLLAVVE

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo11446	Spo11446	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo11446.1	Spo11446.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11446.1.CDS.7	Spo11446.1.CDS.7	CDS
Spo11446.1.CDS.6	Spo11446.1.CDS.6	CDS
Spo11446.1.CDS.5	Spo11446.1.CDS.5	CDS
Spo11446.1.CDS.4	Spo11446.1.CDS.4	CDS
Spo11446.1.CDS.3	Spo11446.1.CDS.3	CDS
Spo11446.1.CDS.2	Spo11446.1.CDS.2	CDS
Spo11446.1.CDS.1	Spo11446.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11446.1.utr3p.1	Spo11446.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11446.1.exon.7	Spo11446.1.exon.7	exon
Spo11446.1.exon.6	Spo11446.1.exon.6	exon
Spo11446.1.exon.5	Spo11446.1.exon.5	exon
Spo11446.1.exon.4	Spo11446.1.exon.4	exon
Spo11446.1.exon.3	Spo11446.1.exon.3	exon
Spo11446.1.exon.2	Spo11446.1.exon.2	exon
Spo11446.1.exon.1	Spo11446.1.exon.1	exon

Homology

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BLAST of Spo11446.1 vs. NCBI nr
Match: gi|902235774|gb|KNA24077.1| (hypothetical protein SOVF_018330 [Spinacia oleracea])

HSP 1 Score: 268.1 bits (684), Expect = 1.000e-68
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1


		  
Query: 29  MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI 88
           MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI
Sbjct: 1   MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI 60

Query: 89  RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA 148
           RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA
Sbjct: 61  RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA 120

Query: 149 EGRHCFCKESDLLAVVE 166
           EGRHCFCKESDLLAVVE
Sbjct: 121 EGRHCFCKESDLLAVVE 137

[Close]

BLAST of Spo11446.1 vs. NCBI nr
Match: gi|731360743|ref|XP_010691984.1| (PREDICTED: 20 kDa chaperonin, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 225.3 bits (573), Expect = 7.700e-56
Identity = 114/137 (83.21%), Postives = 124/137 (90.51%), Query Frame = 1


		  
Query: 29  MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI 88
           MAST +F++LAKPFSLPNN +S   N RL+G RRN L VNAVATKWEP+KVVPQ D VLI
Sbjct: 1   MASTTSFITLAKPFSLPNNNYS---NQRLIGLRRNNLRVNAVATKWEPTKVVPQADRVLI 60

Query: 89  RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA 148
           RLE+LPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVE GKKVLFSD+SAYEVDLG+
Sbjct: 61  RLEDLPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVETGKKVLFSDISAYEVDLGS 120

Query: 149 EGRHCFCKESDLLAVVE 166
           + RHCFCKESDLLAVVE
Sbjct: 121 DSRHCFCKESDLLAVVE 134

[Close]

BLAST of Spo11446.1 vs. NCBI nr
Match: gi|225453275|ref|XP_002267346.1| (PREDICTED: 20 kDa chaperonin, chloroplastic [Vitis vinifera])

HSP 1 Score: 199.1 bits (505), Expect = 5.900e-48
Identity = 101/137 (73.72%), Postives = 120/137 (87.59%), Query Frame = 1


		  
Query: 29  MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI 88
           MAST  F++LA+PFS  +   + + + RLLG R +AL +NA+A KWEP+KVVPQ D VLI
Sbjct: 1   MAST--FITLARPFS-SHKPHTPSPSKRLLGLRSSALKINAIAKKWEPTKVVPQADRVLI 60

Query: 89  RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA 148
           RL++LPEKS+GGVLLPKSAVKFERYLMGEILS+G+DVGEVEAGKKVLFSD++AYEVDLG 
Sbjct: 61  RLQDLPEKSSGGVLLPKSAVKFERYLMGEILSIGADVGEVEAGKKVLFSDINAYEVDLGT 120

Query: 149 EGRHCFCKESDLLAVVE 166
           +GRHCFCKESDLLAVVE
Sbjct: 121 DGRHCFCKESDLLAVVE 134

[Close]

BLAST of Spo11446.1 vs. NCBI nr
Match: gi|694390790|ref|XP_009370952.1| (PREDICTED: 20 kDa chaperonin, chloroplastic isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 198.7 bits (504), Expect = 7.700e-48
Identity = 104/138 (75.36%), Postives = 120/138 (86.96%), Query Frame = 1


		  
Query: 29  MASTAAFVSLAKPFSLPNNTFSRNSNLRLL-GSRRNALTVNAVATKWEPSKVVPQGDGVL 88
           MAST  FV+L  P     NT S +++ +LL G RRN+L V+A+ATKWEP+KVVPQ D VL
Sbjct: 1   MAST--FVTLPTPLLYKPNTASLSNSQKLLPGLRRNSLRVDAIATKWEPTKVVPQADRVL 60

Query: 89  IRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLG 148
           IRLEELP+KSAGGVLLPKSAVKFERYLMGEILSVG+DVGEV+AGKKVLFSD++AYEVDLG
Sbjct: 61  IRLEELPQKSAGGVLLPKSAVKFERYLMGEILSVGADVGEVKAGKKVLFSDINAYEVDLG 120

Query: 149 AEGRHCFCKESDLLAVVE 166
            +GRHCFCKES+LLAVVE
Sbjct: 121 VDGRHCFCKESELLAVVE 136

[Close]

BLAST of Spo11446.1 vs. NCBI nr
Match: gi|567905974|ref|XP_006445475.1| (hypothetical protein CICLE_v10022799mg [Citrus clementina])

HSP 1 Score: 198.4 bits (503), Expect = 1.000e-47
Identity = 100/134 (74.63%), Postives = 114/134 (85.07%), Query Frame = 1


		  
Query: 33  AAFVSLAKP-FSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLIRLE 92
           A FV++  P FSL  N     SN RLLG R+  LTVNA+ATKWEP+KVVPQ D VL+RLE
Sbjct: 3   ATFVTIPAPLFSLKKNNIPSRSNHRLLGWRKQTLTVNAIATKWEPTKVVPQADRVLVRLE 62

Query: 93  ELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGAEGR 152
           +LPEKSAGG+LLPK+AVKFERYLMGEIL+VG+DVG+V AGKKVLFSD+SAYEVDLGA+ R
Sbjct: 63  QLPEKSAGGILLPKAAVKFERYLMGEILTVGADVGQVNAGKKVLFSDISAYEVDLGADER 122

Query: 153 HCFCKESDLLAVVE 166
           HCF KESDLLAVVE
Sbjct: 123 HCFVKESDLLAVVE 136

[Close]

BLAST of Spo11446.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RYX6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_018330 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 7.200e-69
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1


		  
Query: 29  MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI 88
           MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI
Sbjct: 1   MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI 60

Query: 89  RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA 148
           RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA
Sbjct: 61  RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA 120

Query: 149 EGRHCFCKESDLLAVVE 166
           EGRHCFCKESDLLAVVE
Sbjct: 121 EGRHCFCKESDLLAVVE 137

[Close]

BLAST of Spo11446.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BFX6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g017230 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.400e-56
Identity = 114/137 (83.21%), Postives = 124/137 (90.51%), Query Frame = 1


		  
Query: 29  MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI 88
           MAST +F++LAKPFSLPNN +S   N RL+G RRN L VNAVATKWEP+KVVPQ D VLI
Sbjct: 1   MASTTSFITLAKPFSLPNNNYS---NQRLIGLRRNNLRVNAVATKWEPTKVVPQADRVLI 60

Query: 89  RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA 148
           RLE+LPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVE GKKVLFSD+SAYEVDLG+
Sbjct: 61  RLEDLPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVETGKKVLFSDISAYEVDLGS 120

Query: 149 EGRHCFCKESDLLAVVE 166
           + RHCFCKESDLLAVVE
Sbjct: 121 DSRHCFCKESDLLAVVE 134

[Close]

BLAST of Spo11446.1 vs. UniProtKB/TrEMBL
Match: V4U3T8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022799mg PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 7.000e-48
Identity = 100/134 (74.63%), Postives = 114/134 (85.07%), Query Frame = 1


		  
Query: 33  AAFVSLAKP-FSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLIRLE 92
           A FV++  P FSL  N     SN RLLG R+  LTVNA+ATKWEP+KVVPQ D VL+RLE
Sbjct: 3   ATFVTIPAPLFSLKKNNIPSRSNHRLLGWRKQTLTVNAIATKWEPTKVVPQADRVLVRLE 62

Query: 93  ELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGAEGR 152
           +LPEKSAGG+LLPK+AVKFERYLMGEIL+VG+DVG+V AGKKVLFSD+SAYEVDLGA+ R
Sbjct: 63  QLPEKSAGGILLPKAAVKFERYLMGEILTVGADVGQVNAGKKVLFSDISAYEVDLGADER 122

Query: 153 HCFCKESDLLAVVE 166
           HCF KESDLLAVVE
Sbjct: 123 HCFVKESDLLAVVE 136

[Close]

BLAST of Spo11446.1 vs. UniProtKB/TrEMBL
Match: A0A067H0A0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032685mg PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 7.000e-48
Identity = 100/134 (74.63%), Postives = 114/134 (85.07%), Query Frame = 1


		  
Query: 33  AAFVSLAKP-FSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLIRLE 92
           A FV++  P FSL  N     SN RLLG R+  LTVNA+ATKWEP+KVVPQ D VL+RLE
Sbjct: 3   ATFVTIPAPLFSLKKNNIPSRSNHRLLGWRKQTLTVNAIATKWEPTKVVPQADRVLVRLE 62

Query: 93  ELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGAEGR 152
           +LPEKSAGG+LLPK+AVKFERYLMGEIL+VG+DVG+V AGKKVLFSD+SAYEVDLGA+ R
Sbjct: 63  QLPEKSAGGILLPKAAVKFERYLMGEILTVGADVGQVNAGKKVLFSDISAYEVDLGADER 122

Query: 153 HCFCKESDLLAVVE 166
           HCF KESDLLAVVE
Sbjct: 123 HCFVKESDLLAVVE 136

[Close]

BLAST of Spo11446.1 vs. UniProtKB/TrEMBL
Match: K4AYQ1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.000e-46
Identity = 98/137 (71.53%), Postives = 115/137 (83.94%), Query Frame = 1


		  
Query: 29  MASTAAFVSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLI 88
           MAST  F++LAKPF+  +      S  R +G RRN+L +NA++ KWEP+KVVPQ D VLI
Sbjct: 1   MAST--FLTLAKPFTSHSTNLPSFSPQRPIGLRRNSLRINAISQKWEPTKVVPQADRVLI 60

Query: 89  RLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGA 148
           RLEELPEKSAGGVLLPKSAVKFERYLMGE+LSVGSDV +VE GKKVLFSD++AYEVDLG 
Sbjct: 61  RLEELPEKSAGGVLLPKSAVKFERYLMGEVLSVGSDVAQVETGKKVLFSDINAYEVDLGT 120

Query: 149 EGRHCFCKESDLLAVVE 166
           + RHCFCKES+LLA+VE
Sbjct: 121 DARHCFCKESELLALVE 135

[Close]

BLAST of Spo11446.1 vs. ExPASy Swiss-Prot
Match: CH10_SYNJB (10 kDa chaperonin OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=groS PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.500e-8
Identity = 37/98 (37.76%), Postives = 61/98 (62.24%), Query Frame = 1


		  
Query: 77  SKVVPQGDGVLIRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVG----SDVG-----E 136
           S + P GD VL+++ +  EK+AGG+ LP +A   E+  +GE+++VG    +D G     E
Sbjct: 9   STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAK--EKPQVGEVVAVGPGKRNDEGKLIPME 68

Query: 137 VEAGKKVLFSDVSAYEVDLGAEGRHCFCKESDLLAVVE 166
           ++AG KVL+S  +  EV LG++  +    E D+LA+V+
Sbjct: 69  LKAGDKVLYSKYAGTEVKLGSD-EYVLLAERDILAIVQ 103

[Close]

BLAST of Spo11446.1 vs. ExPASy Swiss-Prot
Match: CH10_CYAP8 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 8801) GN=groS PE=3 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 6.000e-8
Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 1


		  
Query: 77  SKVVPQGDGVLIRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVG----SDVG-----E 136
           S V P GD V +++    EK+AGG+LLP +A   E+  +GEI++VG    +D G     E
Sbjct: 9   STVKPLGDRVFVKVSASEEKTAGGILLPDTAK--EKPQIGEIVTVGPGKRNDDGSRSEPE 68

Query: 137 VEAGKKVLFSDVSAYEVDLGAEGRHCFCKESDLLAVVE 166
           V+ G KVL+S  +  ++ LG E  +    E D+LAVV+
Sbjct: 69  VKVGDKVLYSKYAGTDIKLGGED-YVLLSEKDILAVVD 103

[Close]

BLAST of Spo11446.1 vs. ExPASy Swiss-Prot
Match: CH10_PROM5 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9515) GN=groS PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.000e-8
Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 1


		  
Query: 77  SKVVPQGDGVLIRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVG----SDVG-----E 136
           S V P GD + I++ E  EK+AGG+LLP SA   E+  +GE+  VG    +D G     E
Sbjct: 9   STVKPLGDRIFIKVSESEEKTAGGILLPDSAK--EKPQVGEVAQVGPGKLNDDGSRQTPE 68

Query: 137 VEAGKKVLFSDVSAYEVDLGAEGRHCFCKESDLLAVV 165
           V  G KVL+S  +  ++ LG +  +    E D+LAVV
Sbjct: 69  VSIGDKVLYSKYAGTDIKLGGD-EYVLLSEKDILAVV 102

[Close]

BLAST of Spo11446.1 vs. ExPASy Swiss-Prot
Match: CH10_PROMP (10 kDa chaperonin OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groS PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.000e-8
Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 1


		  
Query: 77  SKVVPQGDGVLIRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVG----SDVG-----E 136
           S V P GD + I++ E  EK+AGG+LLP SA   E+  +GE+  VG    +D G     E
Sbjct: 9   STVKPLGDRIFIKVSESEEKTAGGILLPDSAK--EKPQVGEVAQVGPGKLNDDGSRQTPE 68

Query: 137 VEAGKKVLFSDVSAYEVDLGAEGRHCFCKESDLLAVV 165
           V  G KVL+S  +  ++ LG +  +    E D+LAVV
Sbjct: 69  VSIGDKVLYSKYAGTDIKLGGD-EYVLLSEKDILAVV 102

[Close]

BLAST of Spo11446.1 vs. ExPASy Swiss-Prot
Match: CH10_SYNJA (10 kDa chaperonin OS=Synechococcus sp. (strain JA-3-3Ab) GN=groS PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.800e-8
Identity = 36/98 (36.73%), Postives = 61/98 (62.24%), Query Frame = 1


		  
Query: 77  SKVVPQGDGVLIRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVG----SDVG-----E 136
           S + P GD VL+++ +  EK+AGG+ LP +A   E+  +GE+++VG    +D G     E
Sbjct: 9   STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAK--EKPQVGEVVAVGPGKRNDEGKLIPME 68

Query: 137 VEAGKKVLFSDVSAYEVDLGAEGRHCFCKESDLLAVVE 166
           ++AG +VL+S  +  EV LG++  +    E D+LA+V+
Sbjct: 69  LKAGDRVLYSKYAGTEVKLGSD-EYVLLAERDILAIVQ 103

[Close]

BLAST of Spo11446.1 vs. TAIR (Arabidopsis)
Match: AT3G60210.1 (GroES-like family protein)

HSP 1 Score: 178.3 bits (451), Expect = 3.800e-45
Identity = 92/136 (67.65%), Postives = 111/136 (81.62%), Query Frame = 1


		  
Query: 33  AAFVSLAKPF-SLPNNTFSRN-SNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGVLIRL 92
           ++F+++ KPF S P  T +       LLG RRN+  +NAV+TKWEP+KVVPQ D VL+RL
Sbjct: 3   SSFITVPKPFLSFPIKTNAPTLPQQTLLGIRRNSFRINAVSTKWEPAKVVPQADRVLVRL 62

Query: 93  EELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVGEVEAGKKVLFSDVSAYEVDLGAE- 152
           E LPEKS+GGVLLPKSAVKFERYL GE++SVGS+VGEVE GKKVLFSD+SAYEVD G E 
Sbjct: 63  EVLPEKSSGGVLLPKSAVKFERYLTGEVVSVGSEVGEVEPGKKVLFSDMSAYEVDFGTED 122

Query: 153 GRHCFCKESDLLAVVE 166
            +HCFCKESDLLA+V+
Sbjct: 123 AKHCFCKESDLLAIVQ 138

[Close]

BLAST of Spo11446.1 vs. TAIR (Arabidopsis)
Match: AT2G44650.1 (chloroplast chaperonin 10)

HSP 1 Score: 172.2 bits (435), Expect = 2.700e-43
Identity = 94/140 (67.14%), Postives = 110/140 (78.57%), Query Frame = 1


		  
Query: 29  MASTAAFVSLAKPF-SLP-NNTFSRNSNLRLLGSRRNALTVNAVATKWEPSKVVPQGDGV 88
           MAST    SL  PF + P   T    +N  LLGSRR  L + A++TKWEP+KVVPQ D V
Sbjct: 1   MASTFV-CSLPNPFFAFPVKATTPSTANHTLLGSRRGCLRIKAISTKWEPTKVVPQADRV 60

Query: 89  LIRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGSDVG-EVEAGKKVLFSDVSAYEVD 148
           L+RLE+LP KS+GGVLLPK+AVKFERYL GEI+SVGS+VG +V  GK+VLFSDVSAYEVD
Sbjct: 61  LVRLEDLPIKSSGGVLLPKAAVKFERYLTGEIISVGSEVGQQVGPGKRVLFSDVSAYEVD 120

Query: 149 LGAEGRHCFCKESDLLAVVE 166
           LG + RHCFCKESDLLA+VE
Sbjct: 121 LGTDARHCFCKESDLLALVE 139

[Close]

BLAST of Spo11446.1 vs. TAIR (Arabidopsis)
Match: AT5G20720.1 (chaperonin 20)

HSP 1 Score: 52.8 bits (125), Expect = 2.400e-7
Identity = 46/161 (28.57%), Postives = 80/161 (49.69%), Query Frame = 1


		  
Query: 17  AHTLFLSPPNLSMASTAAF----VSLAKPFSLPNNTFSRNSNLRLLGSRRNALTVNAVAT 76
           A  L  SP  +S  S A+      S  K  SL   T  ++   RL+         + VA 
Sbjct: 3   ATQLTASPVTMSARSLASLDGLRASSVKFSSLKPGTLRQSQFRRLV-----VKAASVVAP 62

Query: 77  KWEPSKVVPQGDGVLIRLEELPEKSAGGVLLPKSAVKFERYLMGEILSVGS--DVGE--- 136
           K+  + + P GD VL++++E  EK+ GG+LLP +A    +   GE+++VG    +G+   
Sbjct: 63  KY--TSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQ--SKPQGGEVVAVGEGRTIGKNKI 122

Query: 137 ---VEAGKKVLFSDVSAYEVDLGAEGRHCFCKESDLLAVVE 166
              V  G ++++S  +  EV+   + +H   KE D++ ++E
Sbjct: 123 DITVPTGAQIIYSKYAGTEVEFN-DVKHLILKEDDIVGILE 153

The following BLAST results are available for this feature:

BLAST of Spo11446.1 vs. NCBI nr
BLAST of Spo11446.1 vs. UniProtKB/TrEMBL
BLAST of Spo11446.1 vs. ExPASy Swiss-Prot
BLAST of Spo11446.1 vs. TAIR (Arabidopsis)

BLAST of Spo11446.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902235774\|gb\|KNA24077.1\|	1.0e-68	100.	hypothetical protein SOVF_0183...	[more]
gi\|731360743\|ref\|XP_010691984.1\|	7.7e-56	83.2	PREDICTED: 20 kDa chaperonin, ...	[more]
gi\|225453275\|ref\|XP_002267346.1\|	5.9e-48	73.7	PREDICTED: 20 kDa chaperonin, ...	[more]
gi\|694390790\|ref\|XP_009370952.1\|	7.7e-48	75.3	PREDICTED: 20 kDa chaperonin, ...	[more]
gi\|567905974\|ref\|XP_006445475.1\|	1.0e-47	74.6	hypothetical protein CICLE_v10...	[more]

BLAST of Spo11446.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RYX6_SPIOL	7.2e-69	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BFX6_BETVU	5.4e-56	83.2	Uncharacterized protein OS=Bet...	[more]
V4U3T8_9ROSI	7.0e-48	74.6	Uncharacterized protein OS=Cit...	[more]
A0A067H0A0_CITSI	7.0e-48	74.6	Uncharacterized protein OS=Cit...	[more]
K4AYQ1_SOLLC	1.0e-46	71.5	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo11446.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CH10_SYNJB	3.5e-8	37.7	10 kDa chaperonin OS=Synechoco...	[more]
CH10_CYAP8	6.0e-8	39.8	10 kDa chaperonin OS=Cyanothec...	[more]
CH10_PROM5	6.0e-8	40.2	10 kDa chaperonin OS=Prochloro...	[more]
CH10_PROMP	6.0e-8	40.2	10 kDa chaperonin OS=Prochloro...	[more]
CH10_SYNJA	7.8e-8	36.7	10 kDa chaperonin OS=Synechoco...	[more]

BLAST of Spo11446.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT3G60210.1	3.8e-45	67.6	GroES-like family protein	[more]
AT2G44650.1	2.7e-43	67.1	chloroplast chaperonin 10	[more]
AT5G20720.1	2.4e-7	28.5	chaperonin 20	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011032	GroES-like	unknown	SSF50129	GroES-like	coord: 78..165 score: 3.47
IPR020818	GroES chaperonin family	PRINTS	PR00297	CHAPERONIN10	coord: 103..124 score: 7.3E-5coord: 151..164 score: 7.3E-5coord: 79..94 score: 7.3E-5coord: 129..141 score: 7.
IPR020818	GroES chaperonin family	GENE3D	2.30.33.40		coord: 78..165 score: 9.7
IPR020818	GroES chaperonin family	PANTHER	PTHR10772	10 KDA HEAT SHOCK PROTEIN	coord: 16..165 score: 9.2
IPR020818	GroES chaperonin family	PFAM	PF00166	Cpn10	coord: 78..164 score: 9.3
IPR020818	GroES chaperonin family	SMART	SM00883	Cpn10_2	coord: 78..164 score: 5.8
None	No IPR available	PANTHER	PTHR10772:SF13	CHLOROPLAST CHAPERONIN 10	coord: 16..165 score: 9.2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm