Spo11517.1 (mRNA) | SpinachBase

Overview


Name	Spo11517.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	DUF4228 domain protein
Location	chr4 : 98145273 .. 98145740 (-)
Sequence length	468

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCATTTGTACCTCTCAAATGACCAAAAGAAATGGCAACTTCCTTTCTTGGAGACCTACAATTATGATCATTCATCTTAATGGTAGATTAGAAGAGTTCAACCAACCAATTATTGCATGCCACGTACTCTCTCAACACACAAATTGTTTTCTTGCAAGTTCGGAGTCAATGTACGTTGATTCAATTGCTCCTCCTATTCCATATGATGAAGAACTCGAACTTGGTCAGATATACTTTCTCTTACCACTTTCTCAAGCCCATAAAGTCCTTTCTTTAGAGGACTTATGTGGGTTAGCTATTAAGGCTAGTATAGCACTTGGGTTCACTAATATCAAAAGAAGTCCATCTAATGTTGCCAAAATAGTTGCTCAAGCTCGTAGCTCGTGTCGGGTTCTAAGTGGGTTTGATGCCATTGGCGCGCTTAACCCTCAGGCACGCCGAGGTAGCCGGAGAGTTGGGTTTTAG

mRNA sequence

ATGGGCATTTGTACCTCTCAAATGACCAAAAGAAATGGCAACTTCCTTTCTTGGAGACCTACAATTATGATCATTCATCTTAATGGTAGATTAGAAGAGTTCAACCAACCAATTATTGCATGCCACGTACTCTCTCAACACACAAATTGTTTTCTTGCAAGTTCGGAGTCAATGTACGTTGATTCAATTGCTCCTCCTATTCCATATGATGAAGAACTCGAACTTGGTCAGATATACTTTCTCTTACCACTTTCTCAAGCCCATAAAGTCCTTTCTTTAGAGGACTTATGTGGGTTAGCTATTAAGGCTAGTATAGCACTTGGGTTCACTAATATCAAAAGAAGTCCATCTAATGTTGCCAAAATAGTTGCTCAAGCTCGTAGCTCGTGTCGGGTTCTAAGTGGGTTTGATGCCATTGGCGCGCTTAACCCTCAGGCACGCCGAGGTAGCCGGAGAGTTGGGTTTTAG

Coding sequence (CDS)

ATGGGCATTTGTACCTCTCAAATGACCAAAAGAAATGGCAACTTCCTTTCTTGGAGACCTACAATTATGATCATTCATCTTAATGGTAGATTAGAAGAGTTCAACCAACCAATTATTGCATGCCACGTACTCTCTCAACACACAAATTGTTTTCTTGCAAGTTCGGAGTCAATGTACGTTGATTCAATTGCTCCTCCTATTCCATATGATGAAGAACTCGAACTTGGTCAGATATACTTTCTCTTACCACTTTCTCAAGCCCATAAAGTCCTTTCTTTAGAGGACTTATGTGGGTTAGCTATTAAGGCTAGTATAGCACTTGGGTTCACTAATATCAAAAGAAGTCCATCTAATGTTGCCAAAATAGTTGCTCAAGCTCGTAGCTCGTGTCGGGTTCTAAGTGGGTTTGATGCCATTGGCGCGCTTAACCCTCAGGCACGCCGAGGTAGCCGGAGAGTTGGGTTTTAG

Protein sequence

MGICTSQMTKRNGNFLSWRPTIMIIHLNGRLEEFNQPIIACHVLSQHTNCFLASSESMYVDSIAPPIPYDEELELGQIYFLLPLSQAHKVLSLEDLCGLAIKASIALGFTNIKRSPSNVAKIVAQARSSCRVLSGFDAIGALNPQARRGSRRVGF

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo11517	Spo11517	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo11517.1	Spo11517.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11517.1.CDS.1	Spo11517.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11517.1.exon.1	Spo11517.1.exon.1	exon

Homology

[Close]

BLAST of Spo11517.1 vs. NCBI nr
Match: gi|731358834|ref|XP_010690961.1| (PREDICTED: uncharacterized protein LOC104904416 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 237.3 bits (604), Expect = 1.800e-59
Identity = 122/155 (78.71%), Postives = 137/155 (88.39%), Query Frame = 1

		  
Query: 1   MGICTSQMTKRNGNFLSWRPTIMIIHLNGRLEEFNQPIIACHVLSQHTNCFLASSESMYV 60
           MGIC+SQM KRNGN +SWRPTIMIIH++GRL+EFN  I A  +LSQ+++ FLASSESMYV
Sbjct: 1   MGICSSQMAKRNGN-ISWRPTIMIIHIDGRLQEFNHTITAREILSQNSDYFLASSESMYV 60

Query: 61  DSIAPPIPYDEELELGQIYFLLPLSQAHKVLSLEDLCGLAIKASIALGFTNIKRSPSNVA 120
           DSI P I  DEELELGQIYFLLPLS+A+KV +L DLCGLAIKASIALGF NIKRSPSNVA
Sbjct: 61  DSIVPQILDDEELELGQIYFLLPLSEANKVFTLHDLCGLAIKASIALGFPNIKRSPSNVA 120

Query: 121 KIVAQARSSCRVLSGFDAIGALNPQARRGSRRVGF 156
           KIVAQARSSCRVL+G DAI A+ PQARRGSRR+GF
Sbjct: 121 KIVAQARSSCRVLTGLDAITAIYPQARRGSRRIGF 154

[Close]

BLAST of Spo11517.1 vs. NCBI nr
Match: gi|764547347|ref|XP_011459647.1| (PREDICTED: uncharacterized protein LOC105350018 [Fragaria vesca subsp. vesca])

HSP 1 Score: 138.3 bits (347), Expect = 1.200e-29
Identity = 76/160 (47.50%), Postives = 106/160 (66.25%), Query Frame = 1

		  
Query: 1   MGICTS-QMTKRNGNFLSWRPTIMIIHLNGRLEEFNQPIIACHVLSQHTNCFLASSESMY 60
           MGIC S Q  K  G  ++   T+ I+HL+G+L+E   P+ A H+LS++ NCFL  SESM+
Sbjct: 1   MGICASTQCLKEGGRIVNGSSTVKIVHLDGKLQELRNPVKASHILSKNPNCFLCPSESMF 60

Query: 61  VDSIAPPIPYDEELELGQIYFLLPLSQAHKVLSLEDLCGLAIKASIALG-FTNIKRSPSN 120
           VD+ AP +P DEEL LGQIYFL+P SQ    LSL+DLC LAIKAS+AL   +N+    S 
Sbjct: 61  VDTDAPQVPKDEELRLGQIYFLMPDSQLKAPLSLQDLCSLAIKASVALAKGSNLSAMRSP 120

Query: 121 VAKIVAQARSS---CRVLSGFDAIGALNPQARRGSRRVGF 156
            + IV    S    C+V +GFD + +++ + RRG++R+ F
Sbjct: 121 DSDIVGGGGSQLGCCKVPTGFDTV-SMSSRMRRGNQRIEF 159

[Close]

BLAST of Spo11517.1 vs. NCBI nr
Match: gi|359475255|ref|XP_003631624.1| (PREDICTED: uncharacterized protein LOC100855234 [Vitis vinifera])

HSP 1 Score: 126.7 bits (317), Expect = 3.500e-26
Identity = 69/138 (50.00%), Postives = 92/138 (66.67%), Query Frame = 1

		  
Query: 1   MGICTSQ-MTKRNGNFLSWRPTIMIIHLNGRLEEFNQPIIACHVLSQHTNCFLASSESMY 60
           MGIC+S  +  +NG  LSW  T  IIHL+G+L+EF  PI A  +LSQ+ NCFL SSESM+
Sbjct: 1   MGICSSSHLMSKNGRCLSWPSTAKIIHLDGKLQEFLHPIQAGLILSQNPNCFLCSSESMF 60

Query: 61  VDSIAPPIPYDEELELGQIYFLLPLSQAHKVLSLEDLCGLAIKASIALGFTNIKR--SPS 120
           ++S AP +P  EEL+LGQIYFL+PLS++   LSL+DLC LA+KAS A+   N       +
Sbjct: 61  INSHAPQVPDKEELQLGQIYFLMPLSKSRSPLSLQDLCILAVKASAAIAHPNTAHLAIKT 120

Query: 121 NVAKIVAQARSSCRVLSG 136
             A   + A+  C + SG
Sbjct: 121 GRAAFPSAAQGYCNMPSG 138

[Close]

BLAST of Spo11517.1 vs. NCBI nr
Match: gi|645262449|ref|XP_008236767.1| (PREDICTED: uncharacterized protein LOC103335530 [Prunus mume])

HSP 1 Score: 125.6 bits (314), Expect = 7.800e-26
Identity = 69/151 (45.70%), Postives = 94/151 (62.25%), Query Frame = 1

		  
Query: 3   ICTSQMTKRNGNFLSWRPTIMIIHLNGRLEEFNQPIIACHVLSQHTNCFLASSESMYVDS 62
           IC S      G  L    T  I+ L+G L+E  +P+++ H+LSQ+ NCFL + ESMYV S
Sbjct: 4   ICASSQFISEGAKLIRPSTTKIVQLDGGLQELRRPVVSSHILSQNPNCFLCTLESMYVGS 63

Query: 63  IAPPIPYDEELELGQIYFLLPLSQAHKVLSLEDLCGLAIKASIALGFTNIKRSPSNVAKI 122
            AP +P DEEL LGQIYFL+PLSQ+   LSL+DLC LAIKAS AL       + S  A +
Sbjct: 64  CAPQVPKDEELRLGQIYFLMPLSQSKSPLSLQDLCSLAIKASAALA------NHSEAAHL 123

Query: 123 VAQARSSCRVLSGFDAIGALNPQARRGSRRV 154
           V+  RS     +G D +G ++ +  RG++R+
Sbjct: 124 VSSKRSP----TGVDMVGMMSSKEGRGNQRI 144

[Close]

BLAST of Spo11517.1 vs. NCBI nr
Match: gi|567860990|ref|XP_006423149.1| (hypothetical protein CICLE_v10029512mg [Citrus clementina])

HSP 1 Score: 125.6 bits (314), Expect = 7.800e-26
Identity = 69/156 (44.23%), Postives = 94/156 (60.26%), Query Frame = 1

		  
Query: 1   MGICTSQMTKRNG-NFLSWRPTIMIIHLNGRLEEFNQPIIACHVLSQHTNCFLASSESMY 60
           MG C +   K NG N+L+W  T  IIHL+GRL+EF QP  A  +L ++ NCF+ SSESM+
Sbjct: 1   MGNCAAPQYKNNGANYLNWPATAKIIHLDGRLQEFKQPTKAKRILFENPNCFICSSESMF 60

Query: 61  VDSIAPPIPYDEELELGQIYFLLPLSQAHKVLSLEDLCGLAIKASIALGFTNIKRSPSNV 120
           + S  PP+P DEEL++GQIYFL+P+S+    L+L++LC LAIKAS A+     K      
Sbjct: 61  IGSQVPPLPEDEELQVGQIYFLMPISKLQATLTLQELCSLAIKASSAISHATGKNGLKYP 120

Query: 121 AKIVAQARSSCRVLSGFDAIGALNPQARRGSRRVGF 156
           A   A +   C V   F A       AR+  RR+ +
Sbjct: 121 A---ATSNGCCEVPIEFQA------PARQNDRRIEY 147

[Close]

BLAST of Spo11517.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BHT2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g218100 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.300e-59
Identity = 122/155 (78.71%), Postives = 137/155 (88.39%), Query Frame = 1

		  
Query: 1   MGICTSQMTKRNGNFLSWRPTIMIIHLNGRLEEFNQPIIACHVLSQHTNCFLASSESMYV 60
           MGIC+SQM KRNGN +SWRPTIMIIH++GRL+EFN  I A  +LSQ+++ FLASSESMYV
Sbjct: 1   MGICSSQMAKRNGN-ISWRPTIMIIHIDGRLQEFNHTITAREILSQNSDYFLASSESMYV 60

Query: 61  DSIAPPIPYDEELELGQIYFLLPLSQAHKVLSLEDLCGLAIKASIALGFTNIKRSPSNVA 120
           DSI P I  DEELELGQIYFLLPLS+A+KV +L DLCGLAIKASIALGF NIKRSPSNVA
Sbjct: 61  DSIVPQILDDEELELGQIYFLLPLSEANKVFTLHDLCGLAIKASIALGFPNIKRSPSNVA 120

Query: 121 KIVAQARSSCRVLSGFDAIGALNPQARRGSRRVGF 156
           KIVAQARSSCRVL+G DAI A+ PQARRGSRR+GF
Sbjct: 121 KIVAQARSSCRVLTGLDAITAIYPQARRGSRRIGF 154

[Close]

BLAST of Spo11517.1 vs. UniProtKB/TrEMBL
Match: F6HQJ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g01950 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.400e-26
Identity = 69/138 (50.00%), Postives = 92/138 (66.67%), Query Frame = 1

		  
Query: 1   MGICTSQ-MTKRNGNFLSWRPTIMIIHLNGRLEEFNQPIIACHVLSQHTNCFLASSESMY 60
           MGIC+S  +  +NG  LSW  T  IIHL+G+L+EF  PI A  +LSQ+ NCFL SSESM+
Sbjct: 1   MGICSSSHLMSKNGRCLSWPSTAKIIHLDGKLQEFLHPIQAGLILSQNPNCFLCSSESMF 60

Query: 61  VDSIAPPIPYDEELELGQIYFLLPLSQAHKVLSLEDLCGLAIKASIALGFTNIKR--SPS 120
           ++S AP +P  EEL+LGQIYFL+PLS++   LSL+DLC LA+KAS A+   N       +
Sbjct: 61  INSHAPQVPDKEELQLGQIYFLMPLSKSRSPLSLQDLCILAVKASAAIAHPNTAHLAIKT 120

Query: 121 NVAKIVAQARSSCRVLSG 136
             A   + A+  C + SG
Sbjct: 121 GRAAFPSAAQGYCNMPSG 138

[Close]

BLAST of Spo11517.1 vs. UniProtKB/TrEMBL
Match: V4UAU4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029512mg PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.400e-26
Identity = 69/156 (44.23%), Postives = 94/156 (60.26%), Query Frame = 1

		  
Query: 1   MGICTSQMTKRNG-NFLSWRPTIMIIHLNGRLEEFNQPIIACHVLSQHTNCFLASSESMY 60
           MG C +   K NG N+L+W  T  IIHL+GRL+EF QP  A  +L ++ NCF+ SSESM+
Sbjct: 1   MGNCAAPQYKNNGANYLNWPATAKIIHLDGRLQEFKQPTKAKRILFENPNCFICSSESMF 60

Query: 61  VDSIAPPIPYDEELELGQIYFLLPLSQAHKVLSLEDLCGLAIKASIALGFTNIKRSPSNV 120
           + S  PP+P DEEL++GQIYFL+P+S+    L+L++LC LAIKAS A+     K      
Sbjct: 61  IGSQVPPLPEDEELQVGQIYFLMPISKLQATLTLQELCSLAIKASSAISHATGKNGLKYP 120

Query: 121 AKIVAQARSSCRVLSGFDAIGALNPQARRGSRRVGF 156
           A   A +   C V   F A       AR+  RR+ +
Sbjct: 121 A---ATSNGCCEVPIEFQA------PARQNDRRIEY 147

[Close]

BLAST of Spo11517.1 vs. UniProtKB/TrEMBL
Match: M5VH24_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020442mg PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 7.100e-26
Identity = 71/151 (47.02%), Postives = 97/151 (64.24%), Query Frame = 1

		  
Query: 3   ICTSQMTKRNGNFLSWRPTIMIIHLNGRLEEFNQPIIACHVLSQHTNCFLASSESMYVDS 62
           IC S      G  L    T  I+HL+G L+E  +P+++ H+LSQ+ NCFL +SESMYV S
Sbjct: 4   ICASSQFISEGAKLIRPSTTKIVHLDGGLQELRRPVVSSHILSQNPNCFLCTSESMYVGS 63

Query: 63  IAPPIPYDEELELGQIYFLLPLSQAHKVLSLEDLCGLAIKASIALGFTNIKRSPSNVAKI 122
            AP +P DEEL+LGQIYF++PLSQ+   LSL+DLC LAIKAS AL       + S  A +
Sbjct: 64  CAPQVPKDEELQLGQIYFVMPLSQSKSPLSLQDLCSLAIKASAALA------NHSEAAHL 123

Query: 123 VAQARSSCRVLSGFDAIGALNPQARRGSRRV 154
           V    SS R  +G D +G ++ +  RG++R+
Sbjct: 124 V----SSKRPPTGVDMVG-MSSKEGRGNQRI 143

[Close]

BLAST of Spo11517.1 vs. UniProtKB/TrEMBL
Match: A0A061E4R2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_006313 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 9.200e-26
Identity = 73/164 (44.51%), Postives = 98/164 (59.76%), Query Frame = 1

		  
Query: 1   MGICTSQMTKRNGNFLSWRP-TIMIIHLNGRLEEFNQPIIACHVLSQHTNCFLASSESMY 60
           MGIC S    + G  LSW P T  II+  GR++EF QPI A  VLSQ+ NCFL +SE MY
Sbjct: 1   MGICASSQYVKMGGNLSWPPPTTKIIYPGGRIQEFRQPIKASLVLSQNPNCFLCNSELMY 60

Query: 61  VDSIAPPIPYDEELELGQIYFLLPLSQAHKVLSLEDLCGLAIKASIALGFTN-------- 120
           V+S  P +P DEEL+L QIYFL+P S++   LSL++L  LAIKAS AL   +        
Sbjct: 61  VNSRLPHVPDDEELQLDQIYFLMPRSKSQAPLSLQELGSLAIKASTALAHLDKVYSAQKI 120

Query: 121 IKRSPSNVAKIVAQARSSCRVLSGFDAIGALNPQARRGSRRVGF 156
           +  S  N A+ +A  +  C+   GF+ +G  +P    G+ +V F
Sbjct: 121 LHFSDKNGARFIAGTQRCCKAPIGFNIMGITSPGRSSGNSKVVF 164

[Close]

BLAST of Spo11517.1 vs. TAIR (Arabidopsis)
Match: AT2G23690.1 (unknown protein)

HSP 1 Score: 82.4 bits (202), Expect = 2.700e-16
Identity = 56/159 (35.22%), Postives = 81/159 (50.94%), Query Frame = 1

		  
Query: 1   MGICTSQMTKRNGNFLSWRPTIMIIHLNGRLEEFNQPIIACHVLSQHTNCFLASSESMYV 60
           MGIC+S  + +         T  +I  +GR+ EF  P+   +VL ++  CF+ +S+ M  
Sbjct: 1   MGICSSYESTQVA-------TAKLILHDGRMMEFTSPVKVGYVLQKNPMCFICNSDDMDF 60

Query: 61  DSIAPPIPYDEELELGQIYFLLPLSQAHKVLSLEDLCGLAIKASIALGFTNIKRSPSNVA 120
           D++   I  DEE +LGQ+YF LPLS  H  L  E++  LA+KAS AL      RS  +  
Sbjct: 61  DNVVSAISADEEFQLGQLYFALPLSSLHHSLKAEEMAALAVKASSAL-----MRSGGSCG 120

Query: 121 KIVAQARSSCRVLSGFD-----AIGALNPQARRGSRRVG 155
           +   + R  C     F      A+GA N + R G RR G
Sbjct: 121 RDKCRCRRKCVSPVIFSARRVAAVGA-NGETRNGKRRGG 146

[Close]

BLAST of Spo11517.1 vs. TAIR (Arabidopsis)
Match: AT1G76600.1 (unknown protein)

HSP 1 Score: 79.3 bits (194), Expect = 2.300e-15
Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = 1

		  
Query: 1   MGICTSQMTKRNGNFLSWRPTIMIIHLNGRLEEFNQPIIACHVL----------SQHTNC 60
           MG+C S    RN  ++S   T  I+ +NG L E++ P++A  VL          S  ++ 
Sbjct: 1   MGLCVS--VNRN-EYVSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSY 60

Query: 61  FLASSESMYVDSIAPPIPYDEELELGQIYFLLPLSQAHKVLSLEDLCGLAIKASIAL--- 120
           FL +S+S+Y D   P I  DE L+  QIYF+LP+S+    LS  D+  LA+KAS+A+   
Sbjct: 61  FLCNSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKA 120

Query: 121 -GFTNIKRSPSNVAKIV 124
            G  N +R    ++ +V
Sbjct: 121 AGKKNRRRRSGRISPVV 134

[Close]

BLAST of Spo11517.1 vs. TAIR (Arabidopsis)
Match: AT1G21010.1 (unknown protein)

HSP 1 Score: 77.8 bits (190), Expect = 6.600e-15
Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 1

		  
Query: 1   MGICTSQMTKRNGNFLSWRPTIMIIHLNGRLEEFNQPIIACHVL-------------SQH 60
           MGIC S   + + +     PT+ I+ +NG L E+N P+IA  VL             S+ 
Sbjct: 1   MGICVSFRREDSNS----SPTVKIVTVNGDLREYNVPVIASQVLEAESAAAYSSSSSSRP 60

Query: 61  TNCFLASSESMYVDSIAPPIPYDEELELGQIYFLLPLSQAHKVLSLEDLCGLAIKASIAL 108
           ++ F+  S+S+Y D   P I  +E L+  QIYF+LP+S+    L+  D+  LA+KAS+A+
Sbjct: 61  SSYFICDSDSLYYDDFIPAIKSEEPLQADQIYFVLPISKRQSRLTASDMAALAVKASVAI 116

[Close]

BLAST of Spo11517.1 vs. TAIR (Arabidopsis)
Match: AT4G37240.1 (unknown protein)

HSP 1 Score: 74.7 bits (182), Expect = 5.600e-14
Identity = 48/141 (34.04%), Postives = 71/141 (50.35%), Query Frame = 1

		  
Query: 1   MGICTSQMTKRNGNFLSWRPTIMIIHLNGRLEEFNQPIIACHVLSQHTNCFLASSESMYV 60
           MGIC+S  + +         T  +I  +GR+ EF  P+   +VL ++  CF+ +S+ M  
Sbjct: 1   MGICSSSESTQVA-------TAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDF 60

Query: 61  DSIAPPIPYDEELELGQIYFLLPLSQAHKVLSLEDLCGLAIKASIALGFTNIKRSPSNVA 120
           D     I  DEEL+LGQIYF LPL    + L  E++  LA+KAS AL             
Sbjct: 61  DDAVAAISADEELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSALMRGGGGGCRRKCV 120

Query: 121 KIVAQARSSCRVLSGFDAIGA 142
           + +   +   RV SG D +G+
Sbjct: 121 EPIVSDKLRMRVGSGDDTVGS 134

[Close]

BLAST of Spo11517.1 vs. TAIR (Arabidopsis)
Match: AT5G66580.1 (unknown protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.000e-11
Identity = 36/107 (33.64%), Postives = 60/107 (56.07%), Query Frame = 1

		  
Query: 1   MGICTSQMTKRNGNFLSWRPTIMIIHLNGRLEEFNQPIIACHVLSQHTNCFLASSESMYV 60
           MG C S+ + R+ +         +I L+G L+EF+ P+    +L ++   F+ +S+ M  
Sbjct: 1   MGACASRESLRSDS-------AKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDF 60

Query: 61  DSIAPPIPYDEELELGQIYFLLPLSQAHKVLSLEDLCGLAIKASIAL 108
           D     +  +EEL  GQ+YF+LPL+  +  L  E++  LA+KAS AL
Sbjct: 61  DDAVSAVAGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSAL 100

The following BLAST results are available for this feature:

BLAST of Spo11517.1 vs. NCBI nr
BLAST of Spo11517.1 vs. UniProtKB/TrEMBL
BLAST of Spo11517.1 vs. ExPASy Swiss-Prot
BLAST of Spo11517.1 vs. TAIR (Arabidopsis)

BLAST of Spo11517.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|731358834\|ref\|XP_010690961.1\|	1.8e-59	78.7	PREDICTED: uncharacterized pro...	[more]
gi\|764547347\|ref\|XP_011459647.1\|	1.2e-29	47.5	PREDICTED: uncharacterized pro...	[more]
gi\|359475255\|ref\|XP_003631624.1\|	3.5e-26	50.0	PREDICTED: uncharacterized pro...	[more]
gi\|645262449\|ref\|XP_008236767.1\|	7.8e-26	45.7	PREDICTED: uncharacterized pro...	[more]
gi\|567860990\|ref\|XP_006423149.1\|	7.8e-26	44.2	hypothetical protein CICLE_v10...	[more]

BLAST of Spo11517.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0J8BHT2_BETVU	1.3e-59	78.7	Uncharacterized protein OS=Bet...	[more]
F6HQJ2_VITVI	2.4e-26	50.0	Putative uncharacterized prote...	[more]
V4UAU4_9ROSI	5.4e-26	44.2	Uncharacterized protein OS=Cit...	[more]
M5VH24_PRUPE	7.1e-26	47.0	Uncharacterized protein OS=Pru...	[more]
A0A061E4R2_THECC	9.2e-26	44.5	Uncharacterized protein OS=The...	[more]

BLAST of Spo11517.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

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Match Name	E-value	Identity	Description

BLAST of Spo11517.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

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Match Name	E-value	Identity	Description
AT2G23690.1	2.7e-16	35.2	unknown protein	[more]
AT1G76600.1	2.3e-15	35.7	unknown protein	[more]
AT1G21010.1	6.6e-15	35.8	unknown protein	[more]
AT4G37240.1	5.6e-14	34.0	unknown protein	[more]
AT5G66580.1	2.0e-11	33.6	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..127 score: 3.3
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 4..108 score: 4.7
None	No IPR available	PANTHER	PTHR33052:SF21	SUBFAMILY NOT NAMED	coord: 4..108 score: 4.7