Spo11578.1 (mRNA) | SpinachBase

Overview


Name	Spo11578.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Transducin/WD-40 repeat protein
Location	chr6 : 8312490 .. 8320477 (-)
Sequence length	1796

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATCAGTTTGGCGCAATTGCAAATTTTTCCTCTTCTTTCTACATTTTAATTGCCGCTATTACAATTTTTTCCTTTTTTTTTTTTCAGCATCTTTTGGCCCACTTTAAGGGAAAGTATTATTTTATTGTGGTTATACCATTTAAATGGTAAGACTTTCTCCCCAAACCCCTGTCTTCAGTATCTTGGTGAGGGCGTCCTTCGTGCGTTCTGTGTTCCGCCCCAACCCACAAGCTAAGGTCATTATTTGCTCTAATTTCTCTAATTTATTGCTTAATTTGTCAAAAAAATTGCTTCTTGTTGTATTAATTCAGTAATTTAATACTCCAATGTTATTGCTCGAAATTGAAATTGGGAAGATGCAATTAATTTTTGTACGTAGTATTACGTTTTTCATTTCCGGGGTAATATATATTTCCAAGTTCTTCTTGCTGGGTTCATAATATTTTGGCTTAATGTTGAAGAAAACATTGGGATTTTATTATTGTTAATTTTGTTTTCTGGGTTTTTCTAGTAAAGTTTAATTGGGAACTTGACAAAAAAAAACTGTATTTGATGTTGTTATGTTAGCTTTTAGACTGTGAAAGGTCTCAAATTTTGACGTTTGAAGATGGTACTTTTGACAAATTAATGATTTGTATAGGATACTGAATTACTGATACACATCATAGCATAGTGATCAAATCATTGAAAAGGGGGTATGGAGATAAACTTAAAGGATCTCCCTTTTGACGTAGACTTTCATCCGTCGGATTCTCTTGTTGCCACTGGTTTAATCAATGGTTATCTCCTGTTGTAAGTGATTTCCCTTGGTTCCATTTCTATGGTGGTACTTGAAATTAGAGTTATGTCCCTCATTTTGTGGTTTAATTTCATGTAGGCATCGTTATGCTGCTGAGGCGGAACCACAACGGTAAAGTTTCATATACTTCGAATTTATTGACTCTAATATGTGTGTTTAATGTTCGAAATGCAGTCCGAAAAGGAGGGGGAGGGGTTCGTGTTGTTGTTATGTCACTCTTGTGATTTTCTTTTAAAGCACTGCAAAAGGTAAATTTTGTAGGATGATTTTGATTGCTAAACTTGCAGCTTGCTGAAAGTTCGTGCCCACAAGAAGTCGTGTAGAGCTACTCGGTTTATCAACGAGGGACGCGGTAATCCATTCCTTCCTCCTATCCCCCCCCCCCCCAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCCCCCCCCCCCCCAAAAAAAGTGTTGTGTTTGTATTCCTAGAAGGGAAGTGAGTGGCTTTTAAGTTGGTTGTTTGCGGTGGTGTCAGCAATTGTGACAGGATCCCCAGATTGCTCCATTCTTGCCACCGATGTTGAAACTGGAGCAAAGATTGCTCACCTTGAGAATGCCCACACGTGAGTCGTTTGCTTCAAATTATTGAACTTTGTGTCCTGTCACAAACTAAAGTATTTCTATTGTCTAGATTCTAGAATGTAAATCATAAAATTATATTTTTGACGTGTATGGGGTGGGGGTGCTGTTTTCTTTTGAGAAAAGAATTTTCTGTAGTTCCTTATTTTTAAGTTGAACTTATTGCAGAGCTGCAGTCAACAGAATAATTAATTTGACCGAAACAACCATCGCCTCAGGGGACGATGCAGGAGTTGTCAAGGTTCAGATACACCTTACTTTGTTATATTTTCATTTTATTATGTTCACATCTGCCAGGATATTTTTGTTTCATGATGCCTATTTGGGGGTTGAGGTTGATAAACTTCCCCAAGGTTATGAAGTGCTGCTGGCCAGTAGGCAGTGGCCCAGTGCACATAAGGTGTTGAACAAAGGTTTATTTGTTGTACAGCAGAGGTCAATTGACCTCTGTTGATTTAATAGTTCTCATAAGTGTTTGGCGCATATTTTTTCATGAATATGTTTGAATGAGGAATCAAATCACAGTTTGTGGCTATTGCATTGCATTTAGGAAGCAACTTGTAGAGGATTTGTTACTGCGAAAATGGGTCTTTGAATTGAGTTTTACGGTTCTACTTAGTTGAAATCTAGTGTATCCTGCTTTCATTTTGACATTGAAGATTATTATCTGTTAAAAGGCTAGGTTTTTTTTTTAATTCAGAATGGTGTAAGATACTAAGATATGTTCCAGAACGTAAAAGACTGTGGAATGACATATTCTGTCGCCGAGGGCCAGAGGAGATAAAATTTACTAAAAAGGCAAATCTTATTTTGCTTTCTGTTATGCACTTACGCCTACTCAACAGTCAACACGCTTAAGGCATTTTGTCGTGCTATGGATTCCAACCGTATGTTTCATTTCTCTTGGGCGTTGCTTCTGGAGAACCAAGCTATATGCTAACTGAGGAATGAGAACAAAATTAGACTGAGGGAAGCCGGACACTGTTTACCCGTGGAGTGTAGGCGTGTAGCGTAGAGGCCCAAATTAATTAGTATAAAATTTCCCACTTGTTTGAATGAAGATGGCTTAATACAGTATATACTAGCTTCTATAGATTTCTTTTTGCCTTTTGCTTCCTATTTCTTTCTGATGCATTTGATCGGAGTTTTGGAGGCACAATGGAAAGGTTCTAGTAATCATGCAAGGGCAGGATAGCTAAGTGGTATCTGGCGGGAAATTCTAAATTCCTCATTCCCTTCTCCCCCTTGGCATACTGAATTGAGATTATTTCCAGTCGCTTGACTTCTGATTCCACCTGCCATCCCATGTCCCCCTTTAAGAAGGGCAAATACATCAGAAAACCACTGAATTAGCTGAGACATTGATCTGATACCCCCCTCCCGTACACCTTTTTGTTGTTCCTGATTCACTGGATGAAATTAAACTTGGACCAATTTACTTACAAGCTGCTATAGTGAATTTTTCTTTGGCTTCATCATGTTCACATTTCATCATATTTCTGTGCATAGGTATGGGATACCAGACAACAATCCTGTTGTAACACTTTTCAAGTTCACAACGAGTACATATCAGATATGACTTTTGTATCAGATTCAATGAGACTTTTAGCTACAAGGTAATCAACTTTTTCACATACCTTGATATAGTTGGGATGTGGGATGTTTGTTGTGGTTTTTGCAACTATACATGCGAACAAGCTCCTGTTTAATGCCCTTTCCTTCTATCTCAAAAACTATTTTGTGCAAAAAGACAGCATATCTTAAATTACTATTACTCTCATTTTTGTAAGATATTTTGTTTAGTGCTACTTCCCAAAGAAACATAATGCAATTATGGAGTTCACTAGCCCAGTCTCTTGGATTCTACAGAGCTTGGGGGGTTAGGGTGGAGGATAATTGACTCCAATGATGCCAAGGAAAATAAGCTACTGCCATACAAAGTGATCAATCTGTACTACCGTATGAAATTTATGAGCATATTTTGCATGAGAAAAGACTTAGCTAGAAAAGAGAGGGGGGGAGGGGGGATGTAAAGGCTAAAAGCAACAATAACCAAGTGCAGTTAGATTCTGGAATGGAAATCAGCATATCTTTTGTTCATATGTATGTCGGATTATGTTGCAAGTCTTCATGTTATTTATGTACTGAGTCTCACACTCTCACATGATTTCATTTGGTTTTCTAGTGGGGATGGTACTCTGTCTGTATGCAGTATCCGGAGTAATAAGGTATTGTGGCTGACTAGTTATGTTTTTGTTCTAGTTTGATGTTTACACTGAGATATTTGTATGTCTACTTTGCTGTTTTATGATTTTTGCTGGAGTTTTATTCCTTTATGCTTGTTGATGAATGGAAGGTCCAAGCACAATCTGAATTTTGTGAGGATGAACCACTCTCTCTAGCCGTAATGAAGGTACTTATTATGGTTGATTTCTTTTTTCTAACTTCATAATCTTTCTGGCTCTGCTTCTCTTGTGTTGTGGCAGCCTGTATTGGTGTTTCGGTTTTTGTCCTGCTGAATTATAACAATGCCCCGGAATGGAAATATTCCTTCTCCTAATGATTACTCCTCCCTTCTGTTTTCCGGTGGCGTCATGTATGTTTTAAAAGTTTCATGCTTCTGCAGCTTTTTGGTGGTTGCATGCTTGCATCTAGAAAATAATGTCTTGAGCTTACGTTTGATCAAAAATAATAAAAAAGACTATATTGAATAACTATCATCAATGTGCTAATCCGCATAAAATAAACGACTCAAACTTTGGATATAAGATTTATGTGGCTTTCCCGCTAGCTGGCTTGGAGAGAGACTATGGAAGGTAAAATAACAAGAAAGTTACTTTCTCTGTTTTTTAGTACTCGCAACGCTTGGTCTTTTGACGCTATTCACGTATTCTACTTTGATTATTGTTGGTTTTTTATATGTAAGATAAAACATAGTCATGTGCGATCTTGTTAGATTCGTTTCAATGTGCATTTTCAAAATATCAACTTTATACTTCATTTTTTTAATTGCAACATTTGAGATTTCACGCTTGCCAATGCACTAATTTAACCACTAATATCTCTCATTATACATTTTAAAAAATTATAAAAATTTGATAATTTGAAAGTATATTTCAAGACGAATCTAACAAGATCCCACATGAATATAGTTTTCCTTGCATATAAATCACAAAAAATAACTATATAAGAATATGTGAATAGTGTTAAAACCAAGATGCTGCAATTATTAAAAAATGGAGGAAGTATAATTTTTGCTTAAAGAAATTAAAGATATTAATGATCAAAGTTGTGCATTGGCATGCATGAAAGTGACCAAGGTTGCGAATAAAAACGAATGGAAGAAGTATAATTTATTTGAGGATTAAGAAAACATGATGGTAAAGTACTAATTACAAACAATAGATATTGTCTAGCACTTAAAACACGTCCATAAGACCTCTAAGCACTTATTGTAAGCGATCTGAAGGCAAAGAAGAGCCACGTGGAAATTCCTCTTCCCCCTTTGCACATAACCTACATCTTTTTTTCGAAGGCAATGTGAATAATTTAATTCTTGAGTCCTTTTTGGTTAACTCTTAACTGTGAGCTTGTCCTCTCAGAATGGCAGGAAAGTTATATGCGGGACACAAACAGGGACTTTGTTGTTATATTCATGGGGATTCTTCAAAGATTGCAGGTATGCTTTTTCATGCTTGATGGTGTAGATTTTCTAGTAGATGTTTTAACGCAATATTAGGATTATTATCATATTTATATCTATCTTCAAGAAACTAGGCATGGATTTGGGTTCCTTCTCTGAGTGTCTCTTCTTCATGATGACCTCTCTATGTTCTAAGATTAGGGATGCTTTCTCAATTATGGTTTATTTCCTTCTGTTTATTTTGTGTATGTGTTTGGACAGTGACCGGTTTGTTGATTTGAGCCCAAACCCAGTAGATGCCCTCTTGAAGGTGAATCTTACACTATGCAAGACACCCCTTTCATTTCTGTTCTTCTAATTGGCTAATGTCGCGCTAACTTCTTGTCCTTTCTTCTGATATCAGTATGATGAAGACAGGCTTGTTGCAGGATCATCTAATGGGATCATCAGGTATATGATAGGCTTCTTTGGACCCCCTTCTGTGGAAGTTGTGGCATGACATAGGGATTTCATATTTTGACGTACTGAATTTGGCTTTATTGCAGTTTGGTAGGCATATTGCCCAACAGAATCATTCAACCCATTGCTGAGCACTCAGAATATCCAGTTGAGCGCCTTGGTATGCTAGAGATTATCAAAAAGCTAGATACCTCTTGGATTTACTTATTGTTAGAACATCTTTTCTTAGTTAACAGATATTATTTTTCAATTAATTTGTGTGTGTGTGTGTGTTTTAACCGGAATGTACTCCTTTAATTCGAAATCAAATAGTTACATTGTCAAAATTCAACGAAAGTAGTGAATTAAGGATCTACCTTGGTTTCCCTGAAACACCCTTAATTAAGTGTGGGTATTTCGGAAATCTGAACATGACCTATTTCTATATGAAATGGAACCTTTTTTCTAGACATCCCAGAACAGTATATCGATTATTAATTTTCCATTCGGAAAGAGCAATTGATAACGAAAACTAAATTTGGTTTGCAGATTTTTTTGCAACCTGTTGAATTTTGCAGTTTCCAAATTTGCTGTATCCTGTGGCAAATAACTCTTATTTAACTAACATATGATTTGTGATTGGTCTTGTAGCTTTTTCGCATGATAAGAAGCTCCTTGGAAGTATATCTCATGACAACATGTTGAAGGTTCAAACTCTTCCTTTGTCAACATCTTGTTTTACTTGAATAGCTTTTATTTATTGAAAAATGCCATTTTTTTTGGACGGAATGAGCCAGCAAGAACAATACAAAGGGATTCAAACGTGTGCATGCCTGACAAGTATCTTAATTTGATTGAAATTCCAAGTCCATAGATTTGATTTGTTTCAAATTTAAATCTTTGTTTTTGACTTTTTGTCACACTCAGAACCATAACACAGAACCATAACACAGTTGCTTTACATTTTTTTTTTTACCTTCGCCAGCTTTACTTTTTTCTGGTGTTTTCTCTGGAGTAATTTAGTTTATTACATTGTAGTTGTGGGACATGGATGAGTTACTACAAGGTTCCAGCACAGTGACGAGAAATAACACAGCTGCATCAGAAAGTGACAGCGATAGTGATAATGACAATGATGGGATGGATGTTGATTCTGATCTTGCAAATGCTTCCAGAGGTACGCATAGCCAAATTTATAACTTACCTTTGTTTCTGCACTTTTTTGTTAAATTTGTTGAAGAGCAAAGCTGTATTACTTCATAACTAGTTTCACGGGATAACATCATAAAAGACACTAGCTGTGAATGGTTTTCGTTGGTCTTGGTACCTTTTTAACTTTCTTTGGAAGACAGAGTTCAATTCGCAAAAAACGCACATAATGTTTTGAACACACTAAAAACTCTTCACCTTTTTTTCAGCCAGGCTGACATGAAACTGCATCTCCCACACTGATTGGGATCTTATGGATGCTTAAACCTTTTGTGTTATGGATTATACATATGGAGTATGAAATTTGATAAATGTCCCTCGATGAAATAACTATAAATTATTGAAACAAAATAGTGAAAAGACATTTGACTATCCAGAGCCAAAGTCGCTACTTCAGTTTTTCCTTTTTCTTACTTCTTTCTCGATTGCCTGTTTGGGGCAACCGTTAGTTCACAATGTCTTCTGCCCGACTACATGGTCCATACATCAGAATTCCAATTTTTTTATTTGTGTGTTAATTGTTAGGTGTGTAGTTATAGTAATCCACTGACTTATTAACAAATTGCATTGTCTATGTTGTAAACACTATATGGATTTTTTCATGCCTGTATTCATTTTTGTTTGCGCATCCTTTTGCTTCCGTCTTTTTACCAGGTACTAAGAGGAAGAATACTGGTGGTGCCAACGGGCAAACCTCCAACAGTTCCTTTGGCAGTTTTTTCGAAGGTTTGTAACATGTTGCACGTACTGTTGAGTGTATCCCATGTCGCAGGTATCAATCAGTGAAGGTGAAGGTGAAGGTTGCAGCACTTGTGTTCAGATGGTGTTTTTGATTATTTATCTAGACAATTTAGTTTTGGTTCTTATGGTCATTTTTGTTTACAAATATGGTGCATCATGCTCCATGTAGTTATTTATAAATGTTTTACTTAGCCATTTTGTTTAGGTTTTATGATAATTTTCTTACAATTGTCGCCGAATTTAATACTGGGACATAGGGAGTACTAGTTTTATTTTTCTCTCATGATTTTTTTAGAACTCATATGGTTTAGCCAGGGTAATACTTCGTACTACTCCCTCTGTCCCTTAATATTTGATCTGTTTTGATCGGACACGCTTGCTAATGCACAACTTTGACCACTAATTTCTTTA

mRNA sequence

GAAATCAGTTTGGCGCAATTGCAAATTTTTCCTCTTCTTTCTACATTTTAATTGCCGCTATTACAATTTTTTCCTTTTTTTTTTTTCAGCATCTTTTGGCCCACTTTAAGGGAAAGTATTATTTTATTGTGGTTATACCATTTAAATGGTAAGACTTTCTCCCCAAACCCCTGTCTTCAGTATCTTGGTGAGGGCGTCCTTCGTGCGTTCTGTGTTCCGCCCCAACCCACAAGCTAAGGATACTGAATTACTGATACACATCATAGCATAGTGATCAAATCATTGAAAAGGGGGTATGGAGATAAACTTAAAGGATCTCCCTTTTGACGTAGACTTTCATCCGTCGGATTCTCTTGTTGCCACTGGTTTAATCAATGGTTATCTCCTGTTGCATCGTTATGCTGCTGAGGCGGAACCACAACGCTTGCTGAAAGTTCGTGCCCACAAGAAGTCGTGTAGAGCTACTCGGTTTATCAACGAGGGACGCGCAATTGTGACAGGATCCCCAGATTGCTCCATTCTTGCCACCGATGTTGAAACTGGAGCAAAGATTGCTCACCTTGAGAATGCCCACACAGCTGCAGTCAACAGAATAATTAATTTGACCGAAACAACCATCGCCTCAGGGGACGATGCAGGAGTTGTCAAGGTATGGGATACCAGACAACAATCCTGTTGTAACACTTTTCAAGTTCACAACGAGTACATATCAGATATGACTTTTGTATCAGATTCAATGAGACTTTTAGCTACAAGTGGGGATGGTACTCTGTCTGTATGCAGTATCCGGAGTAATAAGGTCCAAGCACAATCTGAATTTTGTGAGGATGAACCACTCTCTCTAGCCGTAATGAAGAATGGCAGGAAAGTTATATGCGGGACACAAACAGGGACTTTGTTGTTATATTCATGGGGATTCTTCAAAGATTGCAGTGACCGGTTTGTTGATTTGAGCCCAAACCCAGTAGATGCCCTCTTGAAGTATGATGAAGACAGGCTTGTTGCAGGATCATCTAATGGGATCATCAGTTTGGTAGGCATATTGCCCAACAGAATCATTCAACCCATTGCTGAGCACTCAGAATATCCAGTTGAGCGCCTTGCTTTTTCGCATGATAAGAAGCTCCTTGGAAGTATATCTCATGACAACATGTTGAAGTTGTGGGACATGGATGAGTTACTACAAGGTTCCAGCACAGTGACGAGAAATAACACAGCTGCATCAGAAAGTGACAGCGATAGTGATAATGACAATGATGGGATGGATGTTGATTCTGATCTTGCAAATGCTTCCAGAGGTACTAAGAGGAAGAATACTGGTGGTGCCAACGGGCAAACCTCCAACAGTTCCTTTGGCAGTTTTTTCGAAGGTTTGTAACATGTTGCACGTACTGTTGAGTGTATCCCATGTCGCAGGTATCAATCAGTGAAGGTGAAGGTGAAGGTTGCAGCACTTGTGTTCAGATGGTGTTTTTGATTATTTATCTAGACAATTTAGTTTTGGTTCTTATGGTCATTTTTGTTTACAAATATGGTGCATCATGCTCCATGTAGTTATTTATAAATGTTTTACTTAGCCATTTTGTTTAGGTTTTATGATAATTTTCTTACAATTGTCGCCGAATTTAATACTGGGACATAGGGAGTACTAGTTTTATTTTTCTCTCATGATTTTTTTAGAACTCATATGGTTTAGCCAGGGTAATACTTCGTACTACTCCCTCTGTCCCTTAATATTTGATCTGTTTTGATCGGACACGCTTGCTAATGCACAACTTTGACCACTAATTTCTTTA

Coding sequence (CDS)

ATGGAGATAAACTTAAAGGATCTCCCTTTTGACGTAGACTTTCATCCGTCGGATTCTCTTGTTGCCACTGGTTTAATCAATGGTTATCTCCTGTTGCATCGTTATGCTGCTGAGGCGGAACCACAACGCTTGCTGAAAGTTCGTGCCCACAAGAAGTCGTGTAGAGCTACTCGGTTTATCAACGAGGGACGCGCAATTGTGACAGGATCCCCAGATTGCTCCATTCTTGCCACCGATGTTGAAACTGGAGCAAAGATTGCTCACCTTGAGAATGCCCACACAGCTGCAGTCAACAGAATAATTAATTTGACCGAAACAACCATCGCCTCAGGGGACGATGCAGGAGTTGTCAAGGTATGGGATACCAGACAACAATCCTGTTGTAACACTTTTCAAGTTCACAACGAGTACATATCAGATATGACTTTTGTATCAGATTCAATGAGACTTTTAGCTACAAGTGGGGATGGTACTCTGTCTGTATGCAGTATCCGGAGTAATAAGGTCCAAGCACAATCTGAATTTTGTGAGGATGAACCACTCTCTCTAGCCGTAATGAAGAATGGCAGGAAAGTTATATGCGGGACACAAACAGGGACTTTGTTGTTATATTCATGGGGATTCTTCAAAGATTGCAGTGACCGGTTTGTTGATTTGAGCCCAAACCCAGTAGATGCCCTCTTGAAGTATGATGAAGACAGGCTTGTTGCAGGATCATCTAATGGGATCATCAGTTTGGTAGGCATATTGCCCAACAGAATCATTCAACCCATTGCTGAGCACTCAGAATATCCAGTTGAGCGCCTTGCTTTTTCGCATGATAAGAAGCTCCTTGGAAGTATATCTCATGACAACATGTTGAAGTTGTGGGACATGGATGAGTTACTACAAGGTTCCAGCACAGTGACGAGAAATAACACAGCTGCATCAGAAAGTGACAGCGATAGTGATAATGACAATGATGGGATGGATGTTGATTCTGATCTTGCAAATGCTTCCAGAGGTACTAAGAGGAAGAATACTGGTGGTGCCAACGGGCAAACCTCCAACAGTTCCTTTGGCAGTTTTTTCGAAGGTTTGTAA

Protein sequence

MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFINEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVWDTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEPLSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSSNGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSSTVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo11578	Spo11578	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo11578.1	Spo11578.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11578.1.utr5p.2	Spo11578.1.utr5p.2	five_prime_UTR
Spo11578.1.utr5p.1	Spo11578.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11578.1.CDS.15	Spo11578.1.CDS.15	CDS
Spo11578.1.CDS.14	Spo11578.1.CDS.14	CDS
Spo11578.1.CDS.13	Spo11578.1.CDS.13	CDS
Spo11578.1.CDS.12	Spo11578.1.CDS.12	CDS
Spo11578.1.CDS.11	Spo11578.1.CDS.11	CDS
Spo11578.1.CDS.10	Spo11578.1.CDS.10	CDS
Spo11578.1.CDS.9	Spo11578.1.CDS.9	CDS
Spo11578.1.CDS.8	Spo11578.1.CDS.8	CDS
Spo11578.1.CDS.7	Spo11578.1.CDS.7	CDS
Spo11578.1.CDS.6	Spo11578.1.CDS.6	CDS
Spo11578.1.CDS.5	Spo11578.1.CDS.5	CDS
Spo11578.1.CDS.4	Spo11578.1.CDS.4	CDS
Spo11578.1.CDS.3	Spo11578.1.CDS.3	CDS
Spo11578.1.CDS.2	Spo11578.1.CDS.2	CDS
Spo11578.1.CDS.1	Spo11578.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11578.1.utr3p.1	Spo11578.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11578.1.exon.16	Spo11578.1.exon.16	exon
Spo11578.1.exon.15	Spo11578.1.exon.15	exon
Spo11578.1.exon.14	Spo11578.1.exon.14	exon
Spo11578.1.exon.13	Spo11578.1.exon.13	exon
Spo11578.1.exon.12	Spo11578.1.exon.12	exon
Spo11578.1.exon.11	Spo11578.1.exon.11	exon
Spo11578.1.exon.10	Spo11578.1.exon.10	exon
Spo11578.1.exon.9	Spo11578.1.exon.9	exon
Spo11578.1.exon.8	Spo11578.1.exon.8	exon
Spo11578.1.exon.7	Spo11578.1.exon.7	exon
Spo11578.1.exon.6	Spo11578.1.exon.6	exon
Spo11578.1.exon.5	Spo11578.1.exon.5	exon
Spo11578.1.exon.4	Spo11578.1.exon.4	exon
Spo11578.1.exon.3	Spo11578.1.exon.3	exon
Spo11578.1.exon.2	Spo11578.1.exon.2	exon
Spo11578.1.exon.1	Spo11578.1.exon.1	exon

Homology

[Close]

BLAST of Spo11578.1 vs. NCBI nr
Match: gi|902210534|gb|KNA16466.1| (hypothetical protein SOVF_088990 [Spinacia oleracea])

HSP 1 Score: 709.9 bits (1831), Expect = 2.200e-201
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 1


		  
Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI
Sbjct: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW
Sbjct: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP
Sbjct: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS
Sbjct: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS
Sbjct: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL 360
           TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL
Sbjct: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL 360

[Close]

BLAST of Spo11578.1 vs. NCBI nr
Match: gi|731370590|ref|XP_010665768.1| (PREDICTED: WD repeat-containing protein 55 homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 614.4 bits (1583), Expect = 1.300e-172
Identity = 308/360 (85.56%), Postives = 331/360 (91.94%), Query Frame = 1


		  
Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           MEINL  LPFD+DFHPSDSLVATGLINGYLLL+RYAAE EPQRL+KVRAHK+SCRATRFI
Sbjct: 1   MEINLGSLPFDIDFHPSDSLVATGLINGYLLLYRYAAETEPQRLVKVRAHKESCRATRFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           ++G AIVTGSPDCSIL TDVETGAKIAHL+NAH A +NRIINLTE TIASGDDAG VK+W
Sbjct: 61  HKGCAIVTGSPDCSILGTDVETGAKIAHLQNAHAAPINRIINLTEATIASGDDAGCVKIW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQQSCCNTF+VH EYISD+TF SDSMRLLATSGDGTLSVCS+RSNKVQAQSEFCEDEP
Sbjct: 121 DTRQQSCCNTFEVHEEYISDLTFASDSMRLLATSGDGTLSVCSVRSNKVQAQSEFCEDEP 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKV+CGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDR++ GS 
Sbjct: 181 LSVVIMKNGRKVVCGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRVITGSC 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NG+ISLVGILPNRIIQPIAEHS+YPVERLAFSHDKKLLGSISHDN+LKLWDMDELLQGSS
Sbjct: 241 NGLISLVGILPNRIIQPIAEHSDYPVERLAFSHDKKLLGSISHDNVLKLWDMDELLQGSS 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL 360
           TVTRN TAAS SDS S  D DGMDVDSDL+N SRGTK KN    NG+ S+SSFGSFF  L
Sbjct: 301 TVTRNETAASGSDSGS--DGDGMDVDSDLSNTSRGTKTKN----NGKASSSSFGSFFAEL 354

[Close]

BLAST of Spo11578.1 vs. NCBI nr
Match: gi|731324733|ref|XP_010673124.1| (PREDICTED: WD repeat-containing protein 55 homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 612.5 bits (1578), Expect = 4.900e-172
Identity = 306/360 (85.00%), Postives = 330/360 (91.67%), Query Frame = 1


		  
Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           ME+NL  LPFD+DFHPSDSLVATGLINGYL+L+RYAAE EPQRLLKVRAHK+SCRA RFI
Sbjct: 1   MELNLGSLPFDIDFHPSDSLVATGLINGYLVLYRYAAETEPQRLLKVRAHKESCRAARFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           +EGRAIVTGSPDCSIL TDVETGAKIAHL+NAH A +NRIINLTE TIASGDDAG VK+W
Sbjct: 61  HEGRAIVTGSPDCSILGTDVETGAKIAHLQNAHAAPINRIINLTEATIASGDDAGCVKIW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQQSCCNTF+VH EYISD+TF SDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP
Sbjct: 121 DTRQQSCCNTFEVHEEYISDLTFASDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKV+CGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDR++ GS 
Sbjct: 181 LSVVIMKNGRKVVCGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRVITGSC 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NG+ISLVGILPNRIIQPIAEHS+YPVERLAFS+DKKLLGSISHDN+LKLWDMDELLQGSS
Sbjct: 241 NGLISLVGILPNRIIQPIAEHSDYPVERLAFSYDKKLLGSISHDNVLKLWDMDELLQGSS 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL 360
           TVTRN TAAS    DS +D DGMDVDSDL+N SRGTK KN    NG+ S+SSFGSFF  L
Sbjct: 301 TVTRNETAAS----DSGSDGDGMDVDSDLSNTSRGTKTKN----NGKASSSSFGSFFAEL 352

[Close]

BLAST of Spo11578.1 vs. NCBI nr
Match: gi|747068320|ref|XP_011080913.1| (PREDICTED: WD repeat-containing protein 55 homolog isoform X2 [Sesamum indicum])

HSP 1 Score: 525.0 bits (1351), Expect = 1.000e-145
Identity = 259/353 (73.37%), Postives = 298/353 (84.42%), Query Frame = 1


		  
Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           MEI+L  LPFD+DFHPSD+LVA GLI G LLL+RYAAE+ P+RLL+V AH +SCRA RFI
Sbjct: 1   MEIDLGKLPFDLDFHPSDNLVAAGLITGQLLLYRYAAESTPKRLLEVNAHTESCRALRFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           NEG A+VTGSPDCSILATD+ETG  +  LEN+H AAVNRI+NLTE+TIASGDD G +KVW
Sbjct: 61  NEGHAVVTGSPDCSILATDIETGTAVVRLENSHGAAVNRIVNLTESTIASGDDEGCIKVW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQ SCCN+F VH EYISDMTF SDSM+L+ TSGDGTLSVC++RSNKVQ +SEF EDE 
Sbjct: 121 DTRQGSCCNSFNVHEEYISDMTFASDSMKLVGTSGDGTLSVCNLRSNKVQTRSEFSEDEL 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPN VDALLK DEDR++ GS 
Sbjct: 181 LSVVIMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNSVDALLKLDEDRVITGSE 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NGIISLVGILPNRI+QPIAEHSEYPVERLAFSHDKK LGSISHD  LKLWD+++LLQGS 
Sbjct: 241 NGIISLVGILPNRIVQPIAEHSEYPVERLAFSHDKKFLGSISHDQTLKLWDLEDLLQGSG 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSF 354
               ++++A      SD+DNDGMDVD  +A  S+GTKRKN       +S+S+F
Sbjct: 301 NTIPDHSSA------SDSDNDGMDVDDSIAKPSKGTKRKNASKGQNFSSSSNF 347

[Close]

BLAST of Spo11578.1 vs. NCBI nr
Match: gi|747068318|ref|XP_011080911.1| (PREDICTED: WD repeat-containing protein 55 homolog isoform X1 [Sesamum indicum])

HSP 1 Score: 525.0 bits (1351), Expect = 1.000e-145
Identity = 259/353 (73.37%), Postives = 298/353 (84.42%), Query Frame = 1


		  
Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           MEI+L  LPFD+DFHPSD+LVA GLI G LLL+RYAAE+ P+RLL+V AH +SCRA RFI
Sbjct: 11  MEIDLGKLPFDLDFHPSDNLVAAGLITGQLLLYRYAAESTPKRLLEVNAHTESCRALRFI 70

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           NEG A+VTGSPDCSILATD+ETG  +  LEN+H AAVNRI+NLTE+TIASGDD G +KVW
Sbjct: 71  NEGHAVVTGSPDCSILATDIETGTAVVRLENSHGAAVNRIVNLTESTIASGDDEGCIKVW 130

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQ SCCN+F VH EYISDMTF SDSM+L+ TSGDGTLSVC++RSNKVQ +SEF EDE 
Sbjct: 131 DTRQGSCCNSFNVHEEYISDMTFASDSMKLVGTSGDGTLSVCNLRSNKVQTRSEFSEDEL 190

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPN VDALLK DEDR++ GS 
Sbjct: 191 LSVVIMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNSVDALLKLDEDRVITGSE 250

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NGIISLVGILPNRI+QPIAEHSEYPVERLAFSHDKK LGSISHD  LKLWD+++LLQGS 
Sbjct: 251 NGIISLVGILPNRIVQPIAEHSEYPVERLAFSHDKKFLGSISHDQTLKLWDLEDLLQGSG 310

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSF 354
               ++++A      SD+DNDGMDVD  +A  S+GTKRKN       +S+S+F
Sbjct: 311 NTIPDHSSA------SDSDNDGMDVDDSIAKPSKGTKRKNASKGQNFSSSSNF 357

[Close]

BLAST of Spo11578.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAD7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_088990 PE=4 SV=1)

HSP 1 Score: 709.9 bits (1831), Expect = 1.600e-201
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 1


		  
Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI
Sbjct: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW
Sbjct: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP
Sbjct: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS
Sbjct: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS
Sbjct: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL 360
           TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL
Sbjct: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL 360

[Close]

BLAST of Spo11578.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B9D7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g201680 PE=4 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 8.900e-173
Identity = 308/360 (85.56%), Postives = 331/360 (91.94%), Query Frame = 1


		  
Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           MEINL  LPFD+DFHPSDSLVATGLINGYLLL+RYAAE EPQRL+KVRAHK+SCRATRFI
Sbjct: 1   MEINLGSLPFDIDFHPSDSLVATGLINGYLLLYRYAAETEPQRLVKVRAHKESCRATRFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           ++G AIVTGSPDCSIL TDVETGAKIAHL+NAH A +NRIINLTE TIASGDDAG VK+W
Sbjct: 61  HKGCAIVTGSPDCSILGTDVETGAKIAHLQNAHAAPINRIINLTEATIASGDDAGCVKIW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQQSCCNTF+VH EYISD+TF SDSMRLLATSGDGTLSVCS+RSNKVQAQSEFCEDEP
Sbjct: 121 DTRQQSCCNTFEVHEEYISDLTFASDSMRLLATSGDGTLSVCSVRSNKVQAQSEFCEDEP 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKV+CGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDR++ GS 
Sbjct: 181 LSVVIMKNGRKVVCGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRVITGSC 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NG+ISLVGILPNRIIQPIAEHS+YPVERLAFSHDKKLLGSISHDN+LKLWDMDELLQGSS
Sbjct: 241 NGLISLVGILPNRIIQPIAEHSDYPVERLAFSHDKKLLGSISHDNVLKLWDMDELLQGSS 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL 360
           TVTRN TAAS SDS S  D DGMDVDSDL+N SRGTK KN    NG+ S+SSFGSFF  L
Sbjct: 301 TVTRNETAASGSDSGS--DGDGMDVDSDLSNTSRGTKTKN----NGKASSSSFGSFFAEL 354

[Close]

BLAST of Spo11578.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CP24_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g063810 PE=4 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 3.400e-172
Identity = 306/360 (85.00%), Postives = 330/360 (91.67%), Query Frame = 1


		  
Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           ME+NL  LPFD+DFHPSDSLVATGLINGYL+L+RYAAE EPQRLLKVRAHK+SCRA RFI
Sbjct: 1   MELNLGSLPFDIDFHPSDSLVATGLINGYLVLYRYAAETEPQRLLKVRAHKESCRAARFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           +EGRAIVTGSPDCSIL TDVETGAKIAHL+NAH A +NRIINLTE TIASGDDAG VK+W
Sbjct: 61  HEGRAIVTGSPDCSILGTDVETGAKIAHLQNAHAAPINRIINLTEATIASGDDAGCVKIW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQQSCCNTF+VH EYISD+TF SDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP
Sbjct: 121 DTRQQSCCNTFEVHEEYISDLTFASDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKV+CGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDR++ GS 
Sbjct: 181 LSVVIMKNGRKVVCGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRVITGSC 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NG+ISLVGILPNRIIQPIAEHS+YPVERLAFS+DKKLLGSISHDN+LKLWDMDELLQGSS
Sbjct: 241 NGLISLVGILPNRIIQPIAEHSDYPVERLAFSYDKKLLGSISHDNVLKLWDMDELLQGSS 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSFGSFFEGL 360
           TVTRN TAAS    DS +D DGMDVDSDL+N SRGTK KN    NG+ S+SSFGSFF  L
Sbjct: 301 TVTRNETAAS----DSGSDGDGMDVDSDLSNTSRGTKTKN----NGKASSSSFGSFFAEL 352

[Close]

BLAST of Spo11578.1 vs. UniProtKB/TrEMBL
Match: F6HXL9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g08160 PE=3 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 5.100e-136
Identity = 254/353 (71.95%), Postives = 288/353 (81.59%), Query Frame = 1


		  
Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAH-KKSCRATRF 60
           MEINL  LPFD+DFHPS++LVA GLING L L+RY A + PQRLL+V AH  +SCRA RF
Sbjct: 1   MEINLGKLPFDIDFHPSNTLVAAGLINGDLHLYRYGANSLPQRLLEVHAHGDESCRAVRF 60

Query: 61  INEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKV 120
           INEG AIVTGSPD SILATDVETG+ IA LE++H AA+NR+INLTETTIASGDD G +KV
Sbjct: 61  INEGHAIVTGSPDLSILATDVETGSAIARLEHSHGAAINRLINLTETTIASGDDEGCIKV 120

Query: 121 WDTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDE 180
           WDTRQQSCCN+F  H EYISDMTF SDSM+LL  SGDGTLSVC++R NKVQ QSEF EDE
Sbjct: 121 WDTRQQSCCNSFDSHEEYISDMTFASDSMKLLGVSGDGTLSVCNLRRNKVQVQSEFSEDE 180

Query: 181 PLSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGS 240
            LS+ +MKNGRKVICGTQ+G LLLYSWG FKDCSDRF+DLSPN VDALLK DEDR++ GS
Sbjct: 181 LLSVVIMKNGRKVICGTQSGALLLYSWGHFKDCSDRFIDLSPNSVDALLKLDEDRVITGS 240

Query: 241 SNGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGS 300
            NG+ISLVGILPNRIIQPIAEHSEYPVERLAFS D+K LGSISHD MLKLWD+D+LLQGS
Sbjct: 241 ENGLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHDQMLKLWDLDDLLQGS 300

Query: 301 STVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSS 353
            +  R+  A ++SDSD       MDVD      ++ TKRK    +NGQ  NSS
Sbjct: 301 GSTLRSQEAMADSDSDE------MDVD------AKETKRKT--ASNGQALNSS 339

[Close]

BLAST of Spo11578.1 vs. UniProtKB/TrEMBL
Match: M0ZV95_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003462 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 2.500e-135
Identity = 239/354 (67.51%), Postives = 298/354 (84.18%), Query Frame = 1


		  
Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           +EI+L  LPFD+DFHPSD LVA GLI G LLL+RY A++  Q+LL+V+AH +SCR  RFI
Sbjct: 4   VEIDLGKLPFDIDFHPSDHLVAAGLITGDLLLYRYNADSPAQKLLEVKAHSESCRTVRFI 63

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           +EGRAIVTGSPDCSILATD+ETG++I  LEN+H AAVNRI+NLTE+TIASGDD G +KVW
Sbjct: 64  HEGRAIVTGSPDCSILATDIETGSEIVRLENSHGAAVNRIVNLTESTIASGDDEGCIKVW 123

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQ+SC ++F  H EYISD+TF +DSM+LLATSGDG+LSVC++RS+K+Q +SEF E+E 
Sbjct: 124 DTRQRSCSHSFNAHEEYISDITFAADSMKLLATSGDGSLSVCNLRSSKIQTRSEFSEEEL 183

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKVICGTQ+GTLLLYSWGFFKDCSDRFVDLSPN +DALLK DEDR++ G  
Sbjct: 184 LSVVIMKNGRKVICGTQSGTLLLYSWGFFKDCSDRFVDLSPNSIDALLKLDEDRVITGCE 243

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NG+ISLVGILPN+IIQPI EHSEYPVERLAFSHD+K LGS SHD++LKLWD++EL+Q S 
Sbjct: 244 NGLISLVGILPNKIIQPIGEHSEYPVERLAFSHDRKYLGSASHDHLLKLWDLNELVQDSE 303

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTG-GANGQTSNSSF 354
              +N+++A       D+DNDGMDVD ++  +S+G+K+KN   G +  +SN+ F
Sbjct: 304 DGAKNDSSA------EDSDNDGMDVDDNIPKSSKGSKKKNVNKGPDPGSSNNFF 351

[Close]

BLAST of Spo11578.1 vs. ExPASy Swiss-Prot
Match: WDR55_ARATH (WD repeat-containing protein 55 OS=Arabidopsis thaliana GN=WDR55 PE=1 SV=2)

HSP 1 Score: 465.3 bits (1196), Expect = 6.000e-130
Identity = 233/353 (66.01%), Postives = 288/353 (81.59%), Query Frame = 1


		  
Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           MEI+L    F +DFHPS +LVA GLI+G+L L+RY +++   R  KVRAHK+SCRA RFI
Sbjct: 1   MEIDLGANAFGIDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           ++G+ IVT S DCSILATDVETGA++AHLENAH  AVN +IN+TETTIASGDD G VK+W
Sbjct: 61  DDGQRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQ+SC + F  H +YIS MTF SDSM+L+ TSGDGTLSVC++R++KVQ+QSEF EDE 
Sbjct: 121 DTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDEL 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKVICGTQ GTLLLYSWGFFKDCSDRFVDL+PN VDALLK DEDRL+ G  
Sbjct: 181 LSVVIMKNGRKVICGTQNGTLLLYSWGFFKDCSDRFVDLAPNSVDALLKLDEDRLITGCD 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NGIISLVGILPNRIIQPI  H +YP+E LA SHDKK LGS +HD+MLKLW+++E+L+GS+
Sbjct: 241 NGIISLVGILPNRIIQPIGSH-DYPIEDLALSHDKKFLGSTAHDSMLKLWNLEEILEGSN 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSF 354
             + N + A+E   DSD+DNDGMD+D+D + +S+G+KRK    AN   + ++F
Sbjct: 301 VNSGNASGAAE---DSDSDNDGMDLDNDPSKSSKGSKRKTKSKANTLNATNNF 349

[Close]

BLAST of Spo11578.1 vs. ExPASy Swiss-Prot
Match: WDR55_DICDI (WD repeat-containing protein 55 homolog OS=Dictyostelium discoideum GN=wdr55 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 8.300e-55
Identity = 118/335 (35.22%), Postives = 198/335 (59.10%), Query Frame = 1


		  
Query: 2   EINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFIN 61
           +I+   +PF ++FHP++ L+      G L L +Y+ + E +  L +R H+  CR   F +
Sbjct: 15  DISFNTIPFSLNFHPTEDLLVVSDAEGRLKLFKYSLD-ENEVKLSLRPHQSGCRQANFSS 74

Query: 62  EGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVWD 121
           +G+ I T S DCS+   D+ TG+ +   E AH   +N +++  E  + +GDD G +KVWD
Sbjct: 75  DGKYIFTASSDCSMKVIDINTGSILYTREEAHDYPINCLVS-KEFMVFTGDDEGTIKVWD 134

Query: 122 TRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEPL 181
            RQQ+    FQ H ++ISD+T + D   + ATSGDG +S+ +     +   SE  ++E L
Sbjct: 135 MRQQNIVCEFQEHGDFISDITTIDDR-HIAATSGDGGVSIYNFVRKSMDDISEKSDNELL 194

Query: 182 SLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSSN 241
           S   + NG+K++CG+Q G++L+Y     ++   +F    P  VDAL+K + +   +GSS+
Sbjct: 195 SCLSLDNGQKLVCGSQDGSILIYDRNNLENVK-KFAG-HPQSVDALVKVNNNTFFSGSSD 254

Query: 242 GIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQ--GS 301
           GII  +G+ P +++  + EHS +P+ER+A S D + LGSISHD  LK W++    +   S
Sbjct: 255 GIIRFIGLRPKKLLGVVGEHSTFPIERMAISRDNRYLGSISHDFSLKFWNVASFYEEDES 314

Query: 302 STVTRNNTAASESDSDSDNDNDGMDVDSDLANASR 335
                 N  A+E ++D D+D+D  +++ D+ NA++
Sbjct: 315 EDADSANANANEIENDDDDDDDDDEIE-DIENATK 343

[Close]

BLAST of Spo11578.1 vs. ExPASy Swiss-Prot
Match: WDR55_BOVIN (WD repeat-containing protein 55 OS=Bos taurus GN=WDR55 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.000e-52
Identity = 111/283 (39.22%), Postives = 160/283 (56.54%), Query Frame = 1


		  
Query: 14  FHPSDSLVATGLINGYLLLHRYAA-EAEPQRLLKVRAHKKSCRATRFINEGRAIVTGSPD 73
           FHP+  L+A G ++G + +  Y+  E E + L     H KSCRA  F  +G+ +VT S D
Sbjct: 46  FHPARDLLAAGDVDGDVFVFSYSCQEGETKELWSSGHHLKSCRAVVFSEDGQKLVTVSKD 105

Query: 74  CSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVWDTRQQSCCNTFQ 133
            +I   DVE G     +  AH A +N ++ + E  +A+GDD G +++WD R++      +
Sbjct: 106 KAIHFLDVELGRLERRISKAHGAPINSLLLVDENVLATGDDTGGIRLWDQRKEGPLMDMR 165

Query: 134 VHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEPLSLAVMKNGRKV 193
            H EYI+DM    D   LL  SGDG L V +I+  + +  SE    +  S+ +MK GRKV
Sbjct: 166 QHEEYIADMALDPDKKLLLTASGDGCLGVFNIKRRRFELLSEPQSGDLTSVTLMKYGRKV 225

Query: 194 ICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSSNGIISLVGILPN 253
            CG+  GT+ L++W  F   SDRF  L    +D ++   E  L AGS++G+I  V ILPN
Sbjct: 226 ACGSSEGTIYLFNWDGFGATSDRFA-LRAESIDCMVPVTESLLCAGSTDGVIRAVNILPN 285

Query: 254 RIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDEL 296
           R++  + +H+E PVE LA SH    L S  HD  LK WDM +L
Sbjct: 286 RVVGSVGQHAEEPVENLALSHCGCFLASSGHDQRLKFWDMAQL 327

[Close]

BLAST of Spo11578.1 vs. ExPASy Swiss-Prot
Match: WDR55_RAT (WD repeat-containing protein 55 OS=Rattus norvegicus GN=Wdr55 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 5.600e-51
Identity = 108/283 (38.16%), Postives = 159/283 (56.18%), Query Frame = 1


		  
Query: 14  FHPSDSLVATGLINGYLLLHRYAA-EAEPQRLLKVRAHKKSCRATRFINEGRAIVTGSPD 73
           FHP+  L+A G ++G + +  Y+  E E + L     H KSCRA  F  +G+ +VT S D
Sbjct: 46  FHPTRDLLAAGDVDGDVFVFAYSCQEGETKELWSSGHHLKSCRAVVFSEDGQKLVTVSKD 105

Query: 74  CSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVWDTRQQSCCNTFQ 133
            +I   DVE G     +  AH+A +N ++ + E  + +GDD G +++WD R++      +
Sbjct: 106 KAIHVLDVEQGQLERRISKAHSAPINSLLLVDENVLVTGDDTGGIRLWDQRKEGPLMDMR 165

Query: 134 VHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEPLSLAVMKNGRKV 193
            H EYI+DM        LL  SGDG L V +I+  + +  SE    +  S+A+MK G+KV
Sbjct: 166 QHEEYIADMALDPAKKLLLTASGDGCLGVFNIKRRRFELLSEPQSGDLTSVALMKYGKKV 225

Query: 194 ICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSSNGIISLVGILPN 253
            CG+  GT+ L++W  F   SDRF  L    +D ++   E+ L  GS++GII  V ILPN
Sbjct: 226 ACGSSEGTIYLFNWNGFGATSDRFA-LRAESIDCMVPVTENLLCTGSTDGIIRAVNILPN 285

Query: 254 RIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDEL 296
           R++  + +H+  PVE LA SH    L S  HD  LK WDM +L
Sbjct: 286 RVVGTVGQHAGEPVEELALSHCGHFLASSGHDQRLKFWDMTQL 327

[Close]

BLAST of Spo11578.1 vs. ExPASy Swiss-Prot
Match: WDR55_MOUSE (WD repeat-containing protein 55 OS=Mus musculus GN=Wdr55 PE=1 SV=2)

HSP 1 Score: 202.6 bits (514), Expect = 7.300e-51
Identity = 108/283 (38.16%), Postives = 159/283 (56.18%), Query Frame = 1


		  
Query: 14  FHPSDSLVATGLINGYLLLHRYAA-EAEPQRLLKVRAHKKSCRATRFINEGRAIVTGSPD 73
           FHP+  L+A G ++G + +  Y+  E E + L     H KSCRA  F  +G+ +VT S D
Sbjct: 47  FHPTRDLLAAGDVDGDVFVFAYSCQEGETKELWSSGHHLKSCRAVVFSEDGQKLVTVSKD 106

Query: 74  CSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVWDTRQQSCCNTFQ 133
            +I   DVE G     +  AH+A +N ++ + E  + +GDD G +++WD R++      +
Sbjct: 107 KAIHILDVEQGQLERRISKAHSAPINSVLLVDENALVTGDDTGGIRLWDQRKEGPLMDMR 166

Query: 134 VHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEPLSLAVMKNGRKV 193
            H EYI+DM        LL  SGDG L V +I+  + +  SE    +  S+A+MK G+KV
Sbjct: 167 QHEEYIADMALDPAKKLLLTASGDGCLGVFNIKRRRFELLSEPQSGDLTSVALMKYGKKV 226

Query: 194 ICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSSNGIISLVGILPN 253
            CG+  GT+ L++W  F   SDRF  L    +D ++   E+ L  GS++GII  V ILPN
Sbjct: 227 ACGSSEGTIYLFNWNGFGATSDRFA-LRAESIDCIVPVTENLLCTGSTDGIIRAVNILPN 286

Query: 254 RIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDEL 296
           R++  + +H+  PVE LA SH    L S  HD  LK WDM +L
Sbjct: 287 RVVGTVGQHAGEPVEALALSHCGHFLASSGHDQRLKFWDMTQL 328

[Close]

BLAST of Spo11578.1 vs. TAIR (Arabidopsis)
Match: AT2G34260.1 (transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 465.3 bits (1196), Expect = 3.400e-131
Identity = 233/353 (66.01%), Postives = 288/353 (81.59%), Query Frame = 1


		  
Query: 1   MEINLKDLPFDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFI 60
           MEI+L    F +DFHPS +LVA GLI+G+L L+RY +++   R  KVRAHK+SCRA RFI
Sbjct: 1   MEIDLGANAFGIDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFI 60

Query: 61  NEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTETTIASGDDAGVVKVW 120
           ++G+ IVT S DCSILATDVETGA++AHLENAH  AVN +IN+TETTIASGDD G VK+W
Sbjct: 61  DDGQRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIW 120

Query: 121 DTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSNKVQAQSEFCEDEP 180
           DTRQ+SC + F  H +YIS MTF SDSM+L+ TSGDGTLSVC++R++KVQ+QSEF EDE 
Sbjct: 121 DTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDEL 180

Query: 181 LSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRFVDLSPNPVDALLKYDEDRLVAGSS 240
           LS+ +MKNGRKVICGTQ GTLLLYSWGFFKDCSDRFVDL+PN VDALLK DEDRL+ G  
Sbjct: 181 LSVVIMKNGRKVICGTQNGTLLLYSWGFFKDCSDRFVDLAPNSVDALLKLDEDRLITGCD 240

Query: 241 NGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDMDELLQGSS 300
           NGIISLVGILPNRIIQPI  H +YP+E LA SHDKK LGS +HD+MLKLW+++E+L+GS+
Sbjct: 241 NGIISLVGILPNRIIQPIGSH-DYPIEDLALSHDKKFLGSTAHDSMLKLWNLEEILEGSN 300

Query: 301 TVTRNNTAASESDSDSDNDNDGMDVDSDLANASRGTKRKNTGGANGQTSNSSF 354
             + N + A+E   DSD+DNDGMD+D+D + +S+G+KRK    AN   + ++F
Sbjct: 301 VNSGNASGAAE---DSDSDNDGMDLDNDPSKSSKGSKRKTKSKANTLNATNNF 349

[Close]

BLAST of Spo11578.1 vs. TAIR (Arabidopsis)
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 77.8 bits (190), Expect = 1.500e-14
Identity = 72/293 (24.57%), Postives = 128/293 (43.69%), Query Frame = 1


		  
Query: 10  FDVDFHPSDSLVATGLINGYLLLHRYAAEAEPQRLLKVRAHKKSCRATRFINEGRAIVTG 69
           + + F+P+ +L+A+G  +  + L R   + +   +LK   HK +     + ++G  IV+ 
Sbjct: 57  YTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLK--GHKNAILDLHWTSDGSQIVSA 116

Query: 70  SPDCSILATDVETGAKIAHLENAHTAAVNRIINLTE--TTIASGDDAGVVKVWDTRQQSC 129
           SPD ++ A DVETG +I  +   H++ VN           I SG D G  K+WD RQ+  
Sbjct: 117 SPDKTVRAWDVETGKQIKKMAE-HSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGA 176

Query: 130 CNTFQVHNEYISDMTFVSDSMRLLATSG-DGTLSVCSIRSNKVQAQSEFCEDEPLSLAVM 189
             TF   ++Y       SD+   + T G D  + V  +R  +     E  +D    +++ 
Sbjct: 177 IQTFP--DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLS 236

Query: 190 KNGRKVICGTQTGTLLLYSWGFF---KDCSDRFVDLSPNPVDALLKY----DEDRLVAGS 249
            +G  ++       L ++    +     C   F     N    LLK     D  ++ AGS
Sbjct: 237 PDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGS 296

Query: 250 SNGIISLVGILPNRIIQPIAEHSEYPVERLAFSHDKKLLGSISHDNMLKLWDM 293
           S+ ++ +      R I  +  H+   V    F   + ++GS S D  + L ++
Sbjct: 297 SDRMVHIWDTTSRRTIYKLPGHTG-SVNECVFHPTEPIIGSCSSDKNIYLGEI 343

[Close]

BLAST of Spo11578.1 vs. TAIR (Arabidopsis)
Match: AT3G18140.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 52.4 bits (124), Expect = 6.900e-7
Identity = 43/156 (27.56%), Postives = 71/156 (45.51%), Query Frame = 1


		  
Query: 41  PQRLLKVRAHKKSCRATRFINEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRI 100
           PQ ++   +H  +  A  F  + + + +GS D ++   D+   A     E    AAVN +
Sbjct: 68  PQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLR--APGCQKEYESVAAVNTV 127

Query: 101 I-NLTETTIASGDDAGVVKVWDTRQQSC-CNTFQVHNEYISDMTFVSDSMRLLATSGDGT 160
           + +  +T + SGD  G ++VWD R  SC C      +  +  +T + D   ++A +  GT
Sbjct: 128 VLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGT 187

Query: 161 LSVCSIRSNKVQAQSEFCEDEPLSLAVMKNGRKVIC 195
             V  +   K Q  +EF   EPL      NG  + C
Sbjct: 188 CYVWRLLRGK-QTMTEF---EPLHKLQAHNGHILKC 217

[Close]

BLAST of Spo11578.1 vs. TAIR (Arabidopsis)
Match: AT5G16750.1 (Transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 50.1 bits (118), Expect = 3.400e-6
Identity = 41/176 (23.30%), Postives = 72/176 (40.91%), Query Frame = 1


		  
Query: 47  VRAHKKSCRATRFINEGRAIVTGSPDCSILATDVETGAKIAHLENAHTAAVNRIINLTET 106
           V AH K   +         + TGS D +     +     +  L+        RI ++  +
Sbjct: 495 VAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHK----RRIFSVEFS 554

Query: 107 TI------ASGDDAGVVKVWDTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLS 166
           T+      ASGD    VK+W     SC  TF+ H   +   +F++D  + ++   DG L 
Sbjct: 555 TVDQCVMTASGDKT--VKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLK 614

Query: 167 VCSIRSNKVQAQSEFCEDEPLSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRF 217
           + ++ +++  A  +  ED+  +LAV K    +  G     + L+      D  D F
Sbjct: 615 LWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASDKEDDF 664

[Close]

BLAST of Spo11578.1 vs. TAIR (Arabidopsis)
Match: AT1G73720.1 (transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 49.7 bits (117), Expect = 4.400e-6
Identity = 33/144 (22.92%), Postives = 60/144 (41.67%), Query Frame = 1


		  
Query: 108 IASGDDAGVVKVWDTRQQSCCNTFQVHNEYISDMTFVSDSMRLLATSGDGTLSVCSIRSN 167
           +ASG   G +K+W  R   C   F  H++ ++ ++F  D  +LL+TS D T  +  ++S 
Sbjct: 278 LASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSG 337

Query: 168 KVQAQSEFCEDEPLSLAVMKNGRKVICGTQTGTLLLYSWGFFKDCSDRF--------VDL 227
           K+  +               +G ++I  +   T+ ++      DC   F         D 
Sbjct: 338 KLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD-SKTTDCLQTFKPPPPLRGTDA 397

Query: 228 SPNPVDALLKYDEDRLVAGSSNGI 244
           S N +    K  E  +V   ++ I
Sbjct: 398 SVNSIHLFPKNTEHIVVCNKTSSI 420

The following BLAST results are available for this feature:

BLAST of Spo11578.1 vs. NCBI nr
BLAST of Spo11578.1 vs. UniProtKB/TrEMBL
BLAST of Spo11578.1 vs. ExPASy Swiss-Prot
BLAST of Spo11578.1 vs. TAIR (Arabidopsis)

BLAST of Spo11578.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902210534\|gb\|KNA16466.1\|	2.2e-201	100.	hypothetical protein SOVF_0889...	[more]
gi\|731370590\|ref\|XP_010665768.1\|	1.3e-172	85.5	PREDICTED: WD repeat-containin...	[more]
gi\|731324733\|ref\|XP_010673124.1\|	4.9e-172	85.0	PREDICTED: WD repeat-containin...	[more]
gi\|747068320\|ref\|XP_011080913.1\|	1.0e-145	73.3	PREDICTED: WD repeat-containin...	[more]
gi\|747068318\|ref\|XP_011080911.1\|	1.0e-145	73.3	PREDICTED: WD repeat-containin...	[more]

BLAST of Spo11578.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RAD7_SPIOL	1.6e-201	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B9D7_BETVU	8.9e-173	85.5	Uncharacterized protein OS=Bet...	[more]
A0A0J8CP24_BETVU	3.4e-172	85.0	Uncharacterized protein OS=Bet...	[more]
F6HXL9_VITVI	5.1e-136	71.9	Putative uncharacterized prote...	[more]
M0ZV95_SOLTU	2.5e-135	67.5	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo11578.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
WDR55_ARATH	6.0e-130	66.0	WD repeat-containing protein 5...	[more]
WDR55_DICDI	8.3e-55	35.2	WD repeat-containing protein 5...	[more]
WDR55_BOVIN	3.0e-52	39.2	WD repeat-containing protein 5...	[more]
WDR55_RAT	5.6e-51	38.1	WD repeat-containing protein 5...	[more]
WDR55_MOUSE	7.3e-51	38.1	WD repeat-containing protein 5...	[more]

BLAST of Spo11578.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G34260.1	3.4e-131	66.0	transducin family protein / WD...	[more]
AT2G43770.1	1.5e-14	24.5	Transducin/WD40 repeat-like su...	[more]
AT3G18140.1	6.9e-7	27.5	Transducin/WD40 repeat-like su...	[more]
AT5G16750.1	3.4e-6	23.3	Transducin family protein / WD...	[more]
AT1G73720.1	4.4e-6	22.9	transducin family protein / WD...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 260..291 score: 0
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 124..163 score: 0.0022coord: 40..79 score: 0.9coord: 82..121 score: 0.33coord: 1..34 score: 280.0coord: 166..205 score: 45.0coord: 251..291 score: 0.
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 259..293 score: 8
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10		coord: 11..294 score: 4.3
IPR017422	WD repeat protein 55	PIR	PIRSF038169	WD_rpt_55	coord: 1..358 score: 3.0E
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 47..300 score: 17
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 6..294 score: 4.5
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 278..292 scor
None	No IPR available	PANTHER	PTHR22840	FAMILY NOT NAMED	coord: 2..329 score: 2.7E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009960	endosperm development
biological_process	GO:0010197	polar nucleus fusion
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding