Spo11682.1 (mRNA) | SpinachBase

Overview


Name	Spo11682.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Hydroxyproline-rich glycoprotein family protein
Location	chr5 : 31134789 .. 31143395 (+)
Sequence length	2214

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACACGGAAAAATAAAATCTCTTTCCCTTCCCTTCTTTTCCTTTCTTTTCCCTTCCTTTCTTTTCTCTTCCTTTCCTTTACTAATAATGAACCAAATAGGGCCTTAGGGTTTATTGTTATCCAAGTCAGTTGTTCTCTCACAACAGTAATTAGTATTACTCCATATTATCAATTTTTTCTAATGGTATTTCGTAATTTTGAATTATTTTCCACCAAACCTTAAAAAAAAATCAGAAAATAAAAACTTCACTCCAAACCGACTAAAAAGAAAAGAGACAGACGACCAAGCGGGCAGCAGAAACAGTGAAGGAATAGTAGGGAGAAGAAGATGGATAGAGAGTGGGGATCCAAGCCAGGAAGCGGTGGCGCCGCCACTTCCCAGAATGAAGCTATTGACCGCCGTGAACGTCTCCGCCGTCTCGCCCTCGAGACCATCGATCTTGCCAAAGACCCTTATTTCATGCGCAATCATCTCGGCAGGTCTGGTCCCCTTTTCTCTCTCCTCTTTTTTTGTTGTTCAATTTGGTTTTGAATGCTTGAAAATTGTGTTTAATGGCGGTTTTTGTTCATTGGCAACAGTTACGAGTGTAAGCTGTGTCTAACATTGCACAATAATGAGGGCAACTACTTAGCACATACACAAGGGAAGCGTCATCAGACCAATTTGGCGAAGCGAGCTGCGCGCGAGGCGAAAGAGGCTCCTGCTCAACCTCAGCCTAATAAGCGCAAAGTTAATCTCCGTAAAACTGGTTAGTTTTTTTGTTTTTTCTTTCTCTTTTCTTACTTTCTTGCAGTTTTCGCAATTAAGTGGGTTTGCAAGAACATGTAGCACTGGATAGAAACAAATGGAGTAAGAGGATTTCACGATTAAGTGGGTTTGCTAGAACATTTAGTAAATAGATGCTTTGAGAAGCGAAAATAGGAAGAGGTTTCACAATTAAAAAGGTTTGCTAGAATATGTAGCACTAGATGGAAGAGAATGGAGGAAGAGCGTATTTGTGGATGACCAATAGATTCTTTAGTTCATGCCGCTGACCCATCGATCGTTTTGTTATTGGCAATAAGGCTTTGGTTTTGTTATTGTTTCCGGATAATTCTTTTCTGTTGTCTTTTCGGGAGATGTTTTTGTTATGTTTGATGATTTCTGAACATATTTCTTTTGATGATTTGGAAGTAATTGAAGTTAAATTTATGGTGGATTGGTGAAAGATGATCAATTGTTAATATTATGCATTTTGTGTTGTTGGATTTTTTTTGAAGTAAGGACAGGAGAGTTAAATCTTTTTCATTATAGAGAGCATCTCTTGGATGAATTTGATTAAAGGAAGGGAAAAATGGTAAGCTATTTTCATTTAAAGATCGCCTCTTAGATGAATTGATTAAAGGAAGGGAAACGGTTTTATGTTTGGGAGGGTGTTTTGGGGGGGAGAAGAGCTTCCTAGGGTTTTCTTGTATTTGGGTTCCGATTTAGTGAGTTCATTTTTTGGAAGCATAGAGGTTTGAATTTTCTTTTCAAAATTTAGATTTATGGTAATTGAGATATTAAGGGTTGATTTTTTTTAATTTTTTTTTCAAAATTTGGAATTATGGTAACTGAGATGCTAGCTATTATTTGTCATCTCTGTTACTCCTGGTGTCGAACACATGTCTCACGATTGGACACGAGTAAGGGTATCAAATCCATAACAGACACTTTACGTTACAATTGGAAGCTTCATGTTACTCTTAACACACCGGTAAGATGAGAGTGATGGCAAAGAGAGAGGCATAAAGGGGTGCAGTCAACCCTATATGAAATAGATCTTCCATTCAAGGAGTAATACAGATTACAGAGGTTCCTTGGTTACAGTTGAATTTTATATGCAATTATGAATGGATCTAAAAGACTTTTAAGAAATAAGTCAGCGTCAAATTAAGCTATTTTTGGAGTTTTTTGGGCCCTCAAATTCCTAATGTTATTAGCTTCATGTTTTAGTATTCTGTATTATACTTAAGGGAATGTTGTATTCAAGGATTTAGAATATACCTTGAAAATCTTAATGCCTTTTTAATCCTCCTAAACATTATCCTACCACTGCAGTAATTCTTGCTAAGAAGAATGCCCATGTTGTGTCCCCATGTCTTGAATTTAGAGCTTTGTCGAGTTGGTGCTCGGGTATGTACCTCATGGAATTAAAACTTGGACGTAATGGCCGTTCAATAACGGATTTGGATTTACCGTTCCGCGACACCCCGTTACATAATGGTGCGACAAAAATCACATCTTTCACCCCATGTCGCCCGTTGCGTAACGGTGACTCGCCGCGTTAGAACGCTTTTTTCCCGTTACACCGTTCTTTTGTACAAATTGGACAAAAATATTTTAGTAGTTAGTTATGCATTTTAAAAACAAGGTATTTTGTATGATCATTTGTTCACAAAATATGTCCCTTACTCACATTATGATAGGGTTTGTTAGGTTGTGTTGAAATAATGTCTTTTAAACTTAAAAGGTATACACAAAGCTTAAACCTAGTAATATGATTTTTTTGAGAAATTCACACCGGCGTTAGCCGCGATCCGTTCTATTTATCCATTACACGCGGTTTCCGCGATAACGCAACCGTTAACGCGATCTTGACTGCATCCGCGATTTTTTTCTATGATGTACCTAGACAAGTGAACATCCATATTCAAGTCTAATATTATGTATGTTCATGATAATAACTTGAGAAATAGGGTGATCTATGGTTGGTCCTTTTCATCCAAACGTTTCATTGTATCATGTCGTACTGTTAACACCAAAACATGGGTATGGAATTTGTATTGAACACTTCAATCTAGTTGGACATTTCATTATTTTGATCCAGATTAGGCTAGGTATGCTCACGAATGGGATTAAATATAAGTTTTTAAAAAGGAGACAAAAAACATTTTTACCTTAAACATGTTTGAGTATTTGTAGACAAATTAATGTGAATGGCCTATGCAAAAATGTAGAAATATTTTTCACGTTCTTTTTTTTTTGGCTATTTAAGCCTCCAATATCATGACGAAATCCTAGCATCTAGGTTTGTAAGTCATGGCATGTTGGGCACTTGGATTTGTATCCCACTGGGAACTCGTACCTCTTTGTGGTGTTTTGTAACATAGCTTAGGTCTGTGACTATATGTGTGAAACTATGGAGTTCAGCTTTCCTAAGTGAGATATGCAGGGTTCGTAGAACAAGGATCACAAAGTGGATGTTTTCGTGACTATCTTTTAGTTGTTTTGAGGTAGAGGTGGACACGAGCCGATCTCTAACATACCTTGGTTTGGTAAAAAAATTCCGAGTTCGGATTCGAGCTCAAACTCACCTCGATCTTAAAAAATTCCTTATCAATTTCGAGTTAAGTCAAGTTTCGCTTTATCGAGCCTTGGTCTCGATAAACTGATCAATCATATTCCAACAATAAGTACAATAATATATTCATAATTTTCTTGATTAACATTTTAATACTGTTTATTTTGGACAAGTTATGTAAAATATTATCCCATCAACTACGTTTAGGCATTGGTATTAAATGATACATAACAATCTCATAAATATGCATTATTATTTTTAAATTAACGAGCTCACGAACTTCCGAGCCGAACACCATTGAGTTTGGTTTGTTTAGTTACTGAACCATAATTTAAGCTCAAGCTTGGTTCATTTGCAAACGAAAGCTCAAGCCGAACTTTTATCGAACCGATAACGAAATGTTCACTATTTTCTGTTTGTGTCCACCTCTTTTTGGGGGGCAGGATAATCTTCTTACTTTTATCATGTCTGGTATCTTTCAAGATACTGGACAAATGTCATCAGATTTGGGCTCGTTTCTGTGATCTTGTATTGTATTTTTTCTTTAGTTGGACTGTTGTTTTGATTTCATCAAGTATGTGTTTCTCGCTTTATGATTTTATACTAATTTTTTGGCCCGTTCTACACACTGTATAAATATGTATGTGGTGAGTCTTTTGTGATTTCATGCCTAAGCTTTGTATATGACATTATTGAATTTTAGTACTCGTAATAAATACCGATGGGTACATAAAATAGTGTCATAAGATCATCTGTAAGTCTTTGGTAGTAGATAAATAATTCTATAAGCGTCATGCATTCCCATGAAAGGAGGATTTATGAATCAGGATATGAGGTCAATGAGGGTATTTGTCAAGCTTAACCAACAAGCTTTGCTTGAGATCCTTTGAAGTATTTTCAGGATGCACATGGATTTCACTCTATAGTGCAAAAGCATGTTTTATTGCGAAATGATTGTCAGTTGGTAAAAATTTTAAGAGGTGAATTGTAAGTCTTGATAGAGTAGAGAGATTGGTTGGGTAAATTGTGCTTACCCTGTGATAGTAAATCACTAGACACAAGTGTGTGAATTACCATCGTAATAAAGCATGGCATTTAATTGTGACTTTGACACTCGTAAGTTGACACTAGTTGGGCAAATTGACGTTTTCTTTGGGTAAACCGAGACAGAATTTAGGACATAGAAAACTTAGTTTTAAAAAGCGCGCTTAAAGCCCCGGAAGCTCACAGAAGAACGCTTCTGCCAGCCGAAGCCTAGCAATATAGCGCGCTTCTGTGCTTCTGCTGTAATCTGGGCACAATAGACCCTTCTTTTTAATTAAAAAATAAAGTCATGTGACTCTAATCTTCTTTTTTTAAAGTACCACGTGATTTTTTTTAAAAGCGAATATTTGGGGTGGTTTTGAAAACCCTAGTGCAATTTTCTCCCGTAGCCAGATTTCTCTAGCCTTCTCGCCGGATTTCTCCAATCGGATTCTGAATTTTTCTTTCATCTTCTCGATTTCTCTTTTTTTTTTCCCATCTTTTCTTTCCATCTTTTCTGAACTTTTAAAATTTTATTATTTCTTTCCGGGTGCGCTTTCGCTTTGCGCTTAAGCTCCCAGCCCCTTTTGCGCTTCAGTGTGCTTCACGCTTTCTAAAACAAAGATAGAAAGGAGGATTTGAGAGACAAAGGGTATCAAAATGTTTGAAATGGAGATTCTGACTTTCTCCTCTTTTGTATCTGTTTGTGTTTGCTATTCGGTCATATGGATAATGGCTAGTTATTGAATTTTGTGTCTGCTTATGTGATGCTCCACGGTGCTGGTAAAATGGTTATTTAGCATATTACATGAGCAGACTATAGGTACACTAGGACAATTACATGATGTTGAAATTTTACTTTTGTTTGTCAATTCTTTTTGCTGTAATCTCGAGGTCTTTCATAGTTCATGTGGCTGTTTGAGTTGCTAGCATGGTTGTTCAAGGTCTTCTGAACCTACATGTTCTTCAGTGAGAGTGGATCTTTCTTCTGTAGCGTCAACGTTGTTTTCTGTGCTGTGATTTGTGGTCTTCTCGTAAGTCTAATTTTCATGTTTTTCCTTGTAATCTTTTCGTGAACGGCTTCGTGCCCAACATGCTTTCACTTTATTAAAATTTGAAATCTGAAGCAGTATAGCCTACATGTTATTATGTTATATTTGATGTTGAAGTTTGATATCATTTGCCTTAGTGGATGCCTTAATGTGCTGCGTGTCTTTGCTTATTTGTCAGATATAATATTCCATTTATACCCGGAATTCACTATCATACTGTCCCATTCAGCGTTACCAGATTCGCGGTACCCCTCACAAATCTCAAATAGGTTTGCCCGTACCGGATCGTGGTTCTCCGGCGACCCAATTCGTTGTGGTTCGCCAACCAAATCGTTGGTAGTGTCGTGTCAAATCTGAAACCCTAGGTTTACCGATTGAAGGCCAGGGAAGGCGAGAGAAGAAACAAATGTGTTGGGCCTTTTGTTTGATAAGAAATACATGTTTATTGCGATCGTCAATTGTTGTCGTCGTTGTTCTTTCGTGTTATCTAAATCTAAAGTTCACACCCCGGCTTCAAGTCAATTTCCATTTTTTTGGTTTTTCTTCATTAGCGTTGGTGTCTTACTCTTGGTGGGGGCTGGTAGGCTTGAAATTTTTATGTTTTATGGTTCATGAAAGTTTGTTTGTTTTTCTTTCCTTTGTTTTATTAACTTGTTTTTTTAGTATGAGTACTAAAATAAAATCTTTATAAGTATCAAATATTTTGACAATTGTTTTAAAAATACCCCAAAAGAAAAGTTCCAAACCCCTCTCATGAACCTAAAATCAGCCAACCTGGTAATCACGAACCCGAATTTATACCTCGTACGGAAGCAAACCACGAATCAGATAATCCTGGTCCCAATCCTCAAAACATGGGTTCATTCTGATATGAGCATAATACTGTTTTTATTAGTTGTGCCCTTCCCACCCTCTGTCCGTCACCCTGAGTTGGGTATGTTGGAAAAGTTTATCATAGTGTATTTCTATACTAGAAAAACGTGATATCTTCTTCAGAAATTTAACATAGTACACTTGACTATTTCCAGGAGGGGGTATGGTATTTATACTTTGTAACTACTTTGTTGTCATCAATTCTTTAGTTGTTCTTAGGGGTAGAAGTTACTATGCGATTACTTGCTACTGCATATTATGTCGAACAGTTAGTGCTCAATAGCCGACTCTTTTGTTTCTTAAAGATGATGTAGTGTATCTGACGGTCTAATTTTTCCTCTCCTTGTTGAGCAGTCAAGATTGGTAGGCCTGGGTACCGGGTAACTAAGCAATTTGATCCTGAGACAAAGCAGAGGTCTCTTCTTTTCCAGGTAACTGCTGACTGTATTCTTGTTATTTGCAAAACTTGCTCATGGACCTTATATGCTCTGCTTAAAAGGAGTTACTGACTTGTCTCTATATGAATGCAGATAGAGTATCCTGAGATTGAGGACAACACAAAGCCAAGGCACCGGTTTATGTCTTCTTTTGAGCAGGTTAGTTTCGATATGTTGGAAACGTTGAACTACTCCGAATCTAATTGTTGCATATCTTAATATTGTTTATTTCTTCAATAGAGGGTAGAAGCTGTTGACAAAAGATTCCAATATCTCATGTTCGCTGCAGAGCCTTACGAAATTATAGCTTTTAAGGTAAATTTAATCAATCTTGTCACATTTCATGAATCATTTTTAATATGATAAATAATCGTTGATGCTTTGTAATTTATGTTGGTTCAGGTTCCCAGCACTGAAATCGACAAGTCTACCGCCAAATTCTTTTCACATTGGGATCCTGATTCCAAGATGTTCACGGTATGTCCTAATTATTTTTGACATTGGAATTCAGCTATCAAGATGTTCACTACATGTCATTTCTTGTATGTAGACTTTGTTTATCATTTGGTCATCTCAAGTTAATTCGGATTTGTTTTGTTTTTCTCTGATTCATATGGTAATTCTACAGTTGCAGTTATATTTCAAGCCCAAGCCACCAGAGGCAAACAAACCACAACCTCCTCCAGCACCAAATGGTACTTCAGCTCCAGGAGTTCCACAGAGGCCTCTTCCCCCACCTCCTCATGCGCCTCCACCCCCGCAAGGACCTCCACCCAATGCTCCATCTGGGAATCCTCCAAGAATGCCACCGCCACCACCACCATCGATGGGAAATGGTATGAGGCCTATGCCTCCTGGTGCTCCTTCAGCACCACCACCTCCCCCAGCAAACTTCACAATGGGGAACCAACCGCCACCTCCGCCCCAAGGTTTTCCTGGTCAACATATGCAACCACCACCTCCTCCACCTCCCAACATGGCCCAGTAGTCTGGGATATTTGCATTAACTTTTAAGATTCAAAGGTTTTAATTTACATGAATGCGGTGTATAAGATTGAGCTGTGGTGCAAGGAATACTTTTGTGGGGTAAATCATTGTTAACAACTTCCCTAGCAAGGTGACAAATTTTGTTTTTAATCAAACTGTGTAAAATATCCTTTGTAATTGTTACAAGTTTACGATCCATTTTTTATTTAAAACTTTACATTGTCAAGTGTTGTACATAAACCATGGCATCATTGTAATGAACCACGATGCCATGGTTCATTACCGCATGCACAGCAAAACCCGCATGCATTTTCAATGTATCCAAGCTTTCCCGCATGCACAGCAAAACCCGATCTTATAATATGAAAGTCGTCTCTTGGAACATACACGGAGGGAAGCGAGCTCTCTGTCACGGATGGCCTCCCACACCATCGCATGTGGCAGCATGCAAGGCAACAAGCATCGCAAGGCAACGCGGTGCACCGCCAAGGGTGGCGGCAAGGTCGTTGGACACCATCAGGCAACGTGATGGTCCATCGGATAGTGGGTCGTTTGGGGGACCAAACGATATCCAAATTGGCTGAAACTTGGGGGTCCCATGTATTTTGGCCCAATGAAGACAATGGTCGGGCCAGATTTTAGGTTTGAGGCCCAGAAGGCCCGGTTTTGCAGCAGGTATGCACAGTTGTGCACCGGAAGGTTCTAGAGTGCTCCGGATGGGTCTTGGACACTCTAGCTTGGTTGTTTCTTGAAGGTTCTAGCTAGGAAGAGTGTAGAACCTTGCTGTACAGATATTTCTAGATACCTCCTTGTATAGAGGGTTCCCTTGGAGGTGGGAACATTCTAGAGAATTGTAGGGCATTCTTTGTAGGATATGTGTGGAATGTTCTAGAGTAGGAAGTCTATAGGC

mRNA sequence

CAAACACGGAAAAATAAAATCTCTTTCCCTTCCCTTCTTTTCCTTTCTTTTCCCTTCCTTTCTTTTCTCTTCCTTTCCTTTACTAATAATGAACCAAATAGGGCCTTAGGGTTTATTGTTATCCAAGTCAGTTGTTCTCTCACAACAGTAATTAGTATTACTCCATATTATCAATTTTTTCTAATGGTATTTCGTAATTTTGAATTATTTTCCACCAAACCTTAAAAAAAAATCAGAAAATAAAAACTTCACTCCAAACCGACTAAAAAGAAAAGAGACAGACGACCAAGCGGGCAGCAGAAACAGTGAAGGAATAGTAGGGAGAAGAAGATGGATAGAGAGTGGGGATCCAAGCCAGGAAGCGGTGGCGCCGCCACTTCCCAGAATGAAGCTATTGACCGCCGTGAACGTCTCCGCCGTCTCGCCCTCGAGACCATCGATCTTGCCAAAGACCCTTATTTCATGCGCAATCATCTCGGCAGTTACGAGTGTAAGCTGTGTCTAACATTGCACAATAATGAGGGCAACTACTTAGCACATACACAAGGGAAGCGTCATCAGACCAATTTGGCGAAGCGAGCTGCGCGCGAGGCGAAAGAGGCTCCTGCTCAACCTCAGCCTAATAAGCGCAAAGTTAATCTCCGTAAAACTGTCAAGATTGGTAGGCCTGGGTACCGGGTAACTAAGCAATTTGATCCTGAGACAAAGCAGAGGTCTCTTCTTTTCCAGATAGAGTATCCTGAGATTGAGGACAACACAAAGCCAAGGCACCGGTTTATGTCTTCTTTTGAGCAGAGGGTAGAAGCTGTTGACAAAAGATTCCAATATCTCATGTTCGCTGCAGAGCCTTACGAAATTATAGCTTTTAAGGTTCCCAGCACTGAAATCGACAAGTCTACCGCCAAATTCTTTTCACATTGGGATCCTGATTCCAAGATGTTCACGTTGCAGTTATATTTCAAGCCCAAGCCACCAGAGGCAAACAAACCACAACCTCCTCCAGCACCAAATGGTACTTCAGCTCCAGGAGTTCCACAGAGGCCTCTTCCCCCACCTCCTCATGCGCCTCCACCCCCGCAAGGACCTCCACCCAATGCTCCATCTGGGAATCCTCCAAGAATGCCACCGCCACCACCACCATCGATGGGAAATGGTATGAGGCCTATGCCTCCTGGTGCTCCTTCAGCACCACCACCTCCCCCAGCAAACTTCACAATGGGGAACCAACCGCCACCTCCGCCCCAAGGTTTTCCTGGTCAACATATGCAACCACCACCTCCTCCACCTCCCAACATGGCCCAGTAGTCTGGGATATTTGCATTAACTTTTAAGATTCAAAGGTTTTAATTTACATGAATGCGGTGTATAAGATTGAGCTGTGGTGCAAGGAATACTTTTGTGGGGTAAATCATTGTTAACAACTTCCCTAGCAAGGTGACAAATTTTGTTTTTAATCAAACTGTGTAAAATATCCTTTGTAATTGTTACAAGTTTACGATCCATTTTTTATTTAAAACTTTACATTGTCAAGTGTTGTACATAAACCATGGCATCATTGTAATGAACCACGATGCCATGGTTCATTACCGCATGCACAGCAAAACCCGCATGCATTTTCAATGTATCCAAGCTTTCCCGCATGCACAGCAAAACCCGATCTTATAATATGAAAGTCGTCTCTTGGAACATACACGGAGGGAAGCGAGCTCTCTGTCACGGATGGCCTCCCACACCATCGCATGTGGCAGCATGCAAGGCAACAAGCATCGCAAGGCAACGCGGTGCACCGCCAAGGGTGGCGGCAAGGTCGTTGGACACCATCAGGCAACGTGATGGTCCATCGGATAGTGGGTCGTTTGGGGGACCAAACGATATCCAAATTGGCTGAAACTTGGGGGTCCCATGTATTTTGGCCCAATGAAGACAATGGTCGGGCCAGATTTTAGGTTTGAGGCCCAGAAGGCCCGGTTTTGCAGCAGGTATGCACAGTTGTGCACCGGAAGGTTCTAGAGTGCTCCGGATGGGTCTTGGACACTCTAGCTTGGTTGTTTCTTGAAGGTTCTAGCTAGGAAGAGTGTAGAACCTTGCTGTACAGATATTTCTAGATACCTCCTTGTATAGAGGGTTCCCTTGGAGGTGGGAACATTCTAGAGAATTGTAGGGCATTCTTTGTAGGATATGTGTGGAATGTTCTAGAGTAGGAAGTCTATAGGC

Coding sequence (CDS)

ATGGATAGAGAGTGGGGATCCAAGCCAGGAAGCGGTGGCGCCGCCACTTCCCAGAATGAAGCTATTGACCGCCGTGAACGTCTCCGCCGTCTCGCCCTCGAGACCATCGATCTTGCCAAAGACCCTTATTTCATGCGCAATCATCTCGGCAGTTACGAGTGTAAGCTGTGTCTAACATTGCACAATAATGAGGGCAACTACTTAGCACATACACAAGGGAAGCGTCATCAGACCAATTTGGCGAAGCGAGCTGCGCGCGAGGCGAAAGAGGCTCCTGCTCAACCTCAGCCTAATAAGCGCAAAGTTAATCTCCGTAAAACTGTCAAGATTGGTAGGCCTGGGTACCGGGTAACTAAGCAATTTGATCCTGAGACAAAGCAGAGGTCTCTTCTTTTCCAGATAGAGTATCCTGAGATTGAGGACAACACAAAGCCAAGGCACCGGTTTATGTCTTCTTTTGAGCAGAGGGTAGAAGCTGTTGACAAAAGATTCCAATATCTCATGTTCGCTGCAGAGCCTTACGAAATTATAGCTTTTAAGGTTCCCAGCACTGAAATCGACAAGTCTACCGCCAAATTCTTTTCACATTGGGATCCTGATTCCAAGATGTTCACGTTGCAGTTATATTTCAAGCCCAAGCCACCAGAGGCAAACAAACCACAACCTCCTCCAGCACCAAATGGTACTTCAGCTCCAGGAGTTCCACAGAGGCCTCTTCCCCCACCTCCTCATGCGCCTCCACCCCCGCAAGGACCTCCACCCAATGCTCCATCTGGGAATCCTCCAAGAATGCCACCGCCACCACCACCATCGATGGGAAATGGTATGAGGCCTATGCCTCCTGGTGCTCCTTCAGCACCACCACCTCCCCCAGCAAACTTCACAATGGGGAACCAACCGCCACCTCCGCCCCAAGGTTTTCCTGGTCAACATATGCAACCACCACCTCCTCCACCTCCCAACATGGCCCAGTAG

Protein sequence

MDREWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFKVPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLPPPPHAPPPPQGPPPNAPSGNPPRMPPPPPPSMGNGMRPMPPGAPSAPPPPPANFTMGNQPPPPPQGFPGQHMQPPPPPPPNMAQ

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo11682	Spo11682	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo11682.1	Spo11682.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11682.1.exon.1	Spo11682.1.exon.1	exon
Spo11682.1.exon.2	Spo11682.1.exon.2	exon
Spo11682.1.exon.3	Spo11682.1.exon.3	exon
Spo11682.1.exon.4	Spo11682.1.exon.4	exon
Spo11682.1.exon.5	Spo11682.1.exon.5	exon
Spo11682.1.exon.6	Spo11682.1.exon.6	exon
Spo11682.1.exon.7	Spo11682.1.exon.7	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11682.1.utr5p.1	Spo11682.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11682.1.CDS.1	Spo11682.1.CDS.1	CDS
Spo11682.1.CDS.2	Spo11682.1.CDS.2	CDS
Spo11682.1.CDS.3	Spo11682.1.CDS.3	CDS
Spo11682.1.CDS.4	Spo11682.1.CDS.4	CDS
Spo11682.1.CDS.5	Spo11682.1.CDS.5	CDS
Spo11682.1.CDS.6	Spo11682.1.CDS.6	CDS
Spo11682.1.CDS.7	Spo11682.1.CDS.7	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11682.1.utr3p.1	Spo11682.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo11682.1 vs. NCBI nr
Match: gi|902165294|gb|KNA07094.1| (hypothetical protein SOVF_175050 [Spinacia oleracea])

HSP 1 Score: 614.4 bits (1583), Expect = 1.200e-172
Identity = 323/326 (99.08%), Postives = 323/326 (99.08%), Query Frame = 1


		  
Query: 1   MDREWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ 120

Query: 121 FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFK 180
           FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFK
Sbjct: 121 FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLP 240
           VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLP
Sbjct: 181 VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLP 240

Query: 241 PPPHAPPPPQGPPPNAPSGNPPRM--PPPPPPSMGNGMRPMPPGAPSAPPPPPANFTMGN 300
           PPPHAPPPPQGPPPNAPSGNPPRM  PPPPPPSMGNGMRPMPPGAP APPPPPANFTMGN
Sbjct: 241 PPPHAPPPPQGPPPNAPSGNPPRMPPPPPPPPSMGNGMRPMPPGAPPAPPPPPANFTMGN 300

Query: 301 QPPPPPQGFPGQHMQPPPPPPPNMAQ 325
           QPPPPPQGFPGQHMQPPPPPPPNMAQ
Sbjct: 301 QPPPPPQGFPGQHMQPPPPPPPNMAQ 326

[Close]

BLAST of Spo11682.1 vs. NCBI nr
Match: gi|731368751|ref|XP_010696318.1| (PREDICTED: splicing factor 3A subunit 2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 568.5 bits (1464), Expect = 7.300e-159
Identity = 307/331 (92.75%), Postives = 310/331 (93.66%), Query Frame = 1


		  
Query: 1   MDREWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAA+SQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ 120

Query: 121 FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFK 180
           FD ETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEA DK+FQYLMFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAFDKKFQYLMFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLP 240
           VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFK KPPEANKPQPPPAPNGTSAPGVP RPL 
Sbjct: 181 VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKVKPPEANKPQPPPAPNGTSAPGVPPRPLA 240

Query: 241 PPPHAPPPPQGPPPNAPSGNPPRMPPPPPPSMGNGMRPMPP-GAPSAPPPPP------AN 300
           PPPHAPPPP GPPP APSGNPPRMPPPPPPSM NG RP+PP GAP APPPPP      AN
Sbjct: 241 PPPHAPPPPPGPPPGAPSGNPPRMPPPPPPSMTNGPRPLPPGGAPPAPPPPPAGSGGMAN 300

Query: 301 FTMGNQPPPPPQGFPGQHMQPPPPPPPNMAQ 325
           FTMGNQ PPPPQGFPGQ MQ PPPPPPNM Q
Sbjct: 301 FTMGNQLPPPPQGFPGQQMQAPPPPPPNMGQ 331

[Close]

BLAST of Spo11682.1 vs. NCBI nr
Match: gi|645272389|ref|XP_008241372.1| (PREDICTED: splicing factor 3A subunit 2-like [Prunus mume])

HSP 1 Score: 508.8 bits (1309), Expect = 6.800e-141
Identity = 289/346 (83.53%), Postives = 300/346 (86.71%), Query Frame = 1


		  
Query: 1   MDREWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAA++QNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQP+KRKVNLRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVNLRKTVKIGRPGYRVTKQ 120

Query: 121 FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFK 180
           FD E KQRSLLFQIEYPEIED+T+PRHRFMSS+EQRV++VDKR+QYL+FAAEPYEIIAFK
Sbjct: 121 FDGELKQRSLLFQIEYPEIEDSTRPRHRFMSSYEQRVQSVDKRYQYLLFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLP 240
           VPSTEIDK+  KFFSHWDPDSKMFTLQLYFK KPPE NKPQPPPA NG  APGVP RPLP
Sbjct: 181 VPSTEIDKTPEKFFSHWDPDSKMFTLQLYFKTKPPETNKPQPPPAANGPGAPGVPSRPLP 240

Query: 241 PPPHA--PPPPQGPPPNAPSGNPPRMPPP------PPPSMGNGMRPMPP-GAPSAPPPPP 300
           PPP A  PPPPQG PP AP GNPPR PPP      PPP MGNG RPMPP GAP APPPPP
Sbjct: 241 PPPQAPPPPPPQGLPPGAPMGNPPRPPPPIHGSLLPPPPMGNGPRPMPPGGAPPAPPPPP 300

Query: 301 ------ANFTMGNQ---PP--PPPQGFPGQHMQ----PPPPPPPNM 323
                 ANFT G Q   PP  PPPQGFPGQ MQ     PPPPPPNM
Sbjct: 301 VGNNTMANFTPGTQMGRPPSMPPPQGFPGQQMQGQGLRPPPPPPNM 346

[Close]

BLAST of Spo11682.1 vs. NCBI nr
Match: gi|595805533|ref|XP_007202310.1| (hypothetical protein PRUPE_ppa008045mg [Prunus persica])

HSP 1 Score: 507.7 bits (1306), Expect = 1.500e-140
Identity = 288/346 (83.24%), Postives = 298/346 (86.13%), Query Frame = 1


		  
Query: 1   MDREWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAA++QNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQP+KRKVNLRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVNLRKTVKIGRPGYRVTKQ 120

Query: 121 FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFK 180
           FD E KQRSLLFQIEYPEIED+TKPRHRFMSS+EQRV++VDKR+QYL+FAAEPYEIIAFK
Sbjct: 121 FDGELKQRSLLFQIEYPEIEDSTKPRHRFMSSYEQRVQSVDKRYQYLLFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLP 240
           VPSTEIDK+  KFFSHWDPDSKMFTLQLYFK KPPE NKPQPPPA NG  APGVP RPLP
Sbjct: 181 VPSTEIDKTPEKFFSHWDPDSKMFTLQLYFKTKPPETNKPQPPPAANGPGAPGVPSRPLP 240

Query: 241 PPPHA--PPPPQGPPPNAPSGNPPRMPPP------PPPSMGNGMRPMPP-GAPSAPPPPP 300
           PPP A  PPPPQG PP AP GNPPR PPP      PPP MGNG RPMPP GAP APPPPP
Sbjct: 241 PPPQAPPPPPPQGLPPGAPMGNPPRPPPPIHGSLLPPPPMGNGPRPMPPGGAPPAPPPPP 300

Query: 301 ------ANFTMGN-----QPPPPPQGFPGQHMQ----PPPPPPPNM 323
                 ANFT G      Q  PPPQGFPGQ MQ     PPPPPPNM
Sbjct: 301 VGNNTMANFTPGTQMGRPQSMPPPQGFPGQQMQGQGLRPPPPPPNM 346

[Close]

BLAST of Spo11682.1 vs. NCBI nr
Match: gi|1009175642|ref|XP_015868997.1| (PREDICTED: splicing factor 3A subunit 2-like [Ziziphus jujuba])

HSP 1 Score: 501.5 bits (1290), Expect = 1.100e-138
Identity = 283/341 (82.99%), Postives = 297/341 (87.10%), Query Frame = 1


		  
Query: 1   MDREWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAA++QNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQP+KRKV++RKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 121 FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFK 180
           FDPETKQRSLLFQIEYPEIED TKPRHRFMSS+EQRV+  DKR+QYL+FAA+PYEIIAFK
Sbjct: 121 FDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKRYQYLLFAADPYEIIAFK 180

Query: 181 VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLP 240
           VPSTEIDKST KFFSHWDPDSKMFTLQLYFK KP EANKPQP PA NG +APGVP RPLP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPQEANKPQPSPAANGPTAPGVPPRPLP 240

Query: 241 PPPHA--PPPPQGPPPNAPSGNPPR---------MPPPPPPSMGNGMRPMPP-GAPSAPP 300
           PPP A  PPPPQG PP AP GNPPR         +PPPPPP M NG RPMPP GAP APP
Sbjct: 241 PPPQAPPPPPPQGLPPGAPIGNPPRAPPTSLPGSLPPPPPPPMANGPRPMPPGGAPPAPP 300

Query: 301 PPP------ANFTMGNQ---PP--PPPQGFPGQHMQPPPPP 319
           PPP      ANFT G Q   PP  PPPQGFPGQ ++PPPPP
Sbjct: 301 PPPATNNTMANFTPGAQMGRPPTMPPPQGFPGQGIRPPPPP 341

[Close]

BLAST of Spo11682.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QIL8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_175050 PE=4 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 8.000e-173
Identity = 323/326 (99.08%), Postives = 323/326 (99.08%), Query Frame = 1


		  
Query: 1   MDREWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ 120

Query: 121 FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFK 180
           FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFK
Sbjct: 121 FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLP 240
           VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLP
Sbjct: 181 VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLP 240

Query: 241 PPPHAPPPPQGPPPNAPSGNPPRM--PPPPPPSMGNGMRPMPPGAPSAPPPPPANFTMGN 300
           PPPHAPPPPQGPPPNAPSGNPPRM  PPPPPPSMGNGMRPMPPGAP APPPPPANFTMGN
Sbjct: 241 PPPHAPPPPQGPPPNAPSGNPPRMPPPPPPPPSMGNGMRPMPPGAPPAPPPPPANFTMGN 300

Query: 301 QPPPPPQGFPGQHMQPPPPPPPNMAQ 325
           QPPPPPQGFPGQHMQPPPPPPPNMAQ
Sbjct: 301 QPPPPPQGFPGQHMQPPPPPPPNMAQ 326

[Close]

BLAST of Spo11682.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B7U4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g179270 PE=4 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 5.100e-159
Identity = 307/331 (92.75%), Postives = 310/331 (93.66%), Query Frame = 1


		  
Query: 1   MDREWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAA+SQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ 120

Query: 121 FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFK 180
           FD ETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEA DK+FQYLMFAAEPYEIIAFK
Sbjct: 121 FDSETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAFDKKFQYLMFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLP 240
           VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFK KPPEANKPQPPPAPNGTSAPGVP RPL 
Sbjct: 181 VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKVKPPEANKPQPPPAPNGTSAPGVPPRPLA 240

Query: 241 PPPHAPPPPQGPPPNAPSGNPPRMPPPPPPSMGNGMRPMPP-GAPSAPPPPP------AN 300
           PPPHAPPPP GPPP APSGNPPRMPPPPPPSM NG RP+PP GAP APPPPP      AN
Sbjct: 241 PPPHAPPPPPGPPPGAPSGNPPRMPPPPPPSMTNGPRPLPPGGAPPAPPPPPAGSGGMAN 300

Query: 301 FTMGNQPPPPPQGFPGQHMQPPPPPPPNMAQ 325
           FTMGNQ PPPPQGFPGQ MQ PPPPPPNM Q
Sbjct: 301 FTMGNQLPPPPQGFPGQQMQAPPPPPPNMGQ 331

[Close]

BLAST of Spo11682.1 vs. UniProtKB/TrEMBL
Match: M5VQI0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008045mg PE=4 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 1.100e-140
Identity = 288/346 (83.24%), Postives = 298/346 (86.13%), Query Frame = 1


		  
Query: 1   MDREWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAA++QNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQP+KRKVNLRKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVNLRKTVKIGRPGYRVTKQ 120

Query: 121 FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFK 180
           FD E KQRSLLFQIEYPEIED+TKPRHRFMSS+EQRV++VDKR+QYL+FAAEPYEIIAFK
Sbjct: 121 FDGELKQRSLLFQIEYPEIEDSTKPRHRFMSSYEQRVQSVDKRYQYLLFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLP 240
           VPSTEIDK+  KFFSHWDPDSKMFTLQLYFK KPPE NKPQPPPA NG  APGVP RPLP
Sbjct: 181 VPSTEIDKTPEKFFSHWDPDSKMFTLQLYFKTKPPETNKPQPPPAANGPGAPGVPSRPLP 240

Query: 241 PPPHA--PPPPQGPPPNAPSGNPPRMPPP------PPPSMGNGMRPMPP-GAPSAPPPPP 300
           PPP A  PPPPQG PP AP GNPPR PPP      PPP MGNG RPMPP GAP APPPPP
Sbjct: 241 PPPQAPPPPPPQGLPPGAPMGNPPRPPPPIHGSLLPPPPMGNGPRPMPPGGAPPAPPPPP 300

Query: 301 ------ANFTMGN-----QPPPPPQGFPGQHMQ----PPPPPPPNM 323
                 ANFT G      Q  PPPQGFPGQ MQ     PPPPPPNM
Sbjct: 301 VGNNTMANFTPGTQMGRPQSMPPPQGFPGQQMQGQGLRPPPPPPNM 346

[Close]

BLAST of Spo11682.1 vs. UniProtKB/TrEMBL
Match: A0A061ET11_THECC (Hydroxyproline-rich glycoprotein family protein OS=Theobroma cacao GN=TCM_022302 PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 4.200e-137
Identity = 277/338 (81.95%), Postives = 293/338 (86.69%), Query Frame = 1


		  
Query: 1   MDREWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDR+WGSKPGSGGAA++Q EA+DRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDRDWGSKPGSGGAASAQTEAMDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQP+KRKV++RKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 121 FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFK 180
           +DPETKQRSLLFQIEYPEIEDNTKPRHR MSS+EQRV+  D+R+QYL+FAAEPYEIIAFK
Sbjct: 121 YDPETKQRSLLFQIEYPEIEDNTKPRHRVMSSYEQRVQPFDRRYQYLLFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLP 240
           VPSTEIDKST KFFSHWDPDSKMFTLQ+YFK KP EANKPQPPP  NGT+APG P RPLP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQVYFKTKPLEANKPQPPPPANGTAAPGAPPRPLP 240

Query: 241 PPPHAPPPPQGPP---PNAPSGNPPRMP---PPPPPSMGNGMRPMPP-GAPSAPPPPP-- 300
           PPPHAPPPP  PP   PN P   PP +P   PPPPP MGNG RPMPP G P APPPPP  
Sbjct: 241 PPPHAPPPPPPPPQGLPNPPRAPPPPVPGSLPPPPPPMGNGPRPMPPGGTPMAPPPPPGG 300

Query: 301 ----ANFTMGNQPPPPPQGFPGQHMQ-PPPPPPPNMAQ 325
               ANFT      PPPQGFPGQ MQ  PPPPPPNM Q
Sbjct: 301 SGTMANFTPRPPTIPPPQGFPGQQMQGHPPPPPPNMGQ 338

[Close]

BLAST of Spo11682.1 vs. UniProtKB/TrEMBL
Match: A0A0D2S491_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G161000 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 3.900e-135
Identity = 277/342 (80.99%), Postives = 294/342 (85.96%), Query Frame = 1


		  
Query: 1   MDREWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDR+WGSKPGSGGAA++Q EA+DRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDRDWGSKPGSGGAASAQTEAMDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQP+KRKV++RKTVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQ 120

Query: 121 FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFK 180
           +DPETKQRSLLFQIEYPEIEDNTKPRHR MSS+EQRV+  D+R+QYL+FAAEPYEIIAFK
Sbjct: 121 YDPETKQRSLLFQIEYPEIEDNTKPRHRVMSSYEQRVQPFDRRYQYLLFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLP 240
           VPSTEIDKST KFFSHWDPDSKMFTLQ+YFK KP E NKP PPPA NGT+APG P RPLP
Sbjct: 181 VPSTEIDKSTPKFFSHWDPDSKMFTLQVYFKTKPLEVNKPPPPPAVNGTAAPGAPPRPLP 240

Query: 241 PPPHAPPPPQGPP----PNAPSGNPPRMP---PPPPPSMGNGMRPMPPGA-PSAPPPPP- 300
           PPPHAP PP  PP    PN P G PP  P   PPPPP MGNG RPMPPG  P APPPPP 
Sbjct: 241 PPPHAPAPPPPPPPQGLPNPPRGPPPPAPGSLPPPPPPMGNGPRPMPPGGNPIAPPPPPG 300

Query: 301 ANFTMGN---QPP--PPPQGFPGQHMQ----PPPPPPPNMAQ 325
            + TMGN   +PP  PPPQGFPG  MQ     PPPPPPNM Q
Sbjct: 301 GSGTMGNFTPRPPTNPPPQGFPGHQMQGQGMHPPPPPPNMGQ 342

[Close]

BLAST of Spo11682.1 vs. ExPASy Swiss-Prot
Match: SF3A2_HUMAN (Splicing factor 3A subunit 2 OS=Homo sapiens GN=SF3A2 PE=1 SV=2)

HSP 1 Score: 294.3 bits (752), Expect = 1.700e-78
Identity = 195/343 (56.85%), Postives = 231/343 (67.35%), Query Frame = 1


		  
Query: 6   GSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEG 65
           G K GSGG A+S     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG
Sbjct: 8   GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEG 67

Query: 66  NYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQFDPET 125
           +YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV ++K VKIGRPGY+VTKQ D E 
Sbjct: 68  SYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVTKQRDSEM 127

Query: 126 KQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFKVPSTE 185
            Q+SLLFQI+YPEI +   PRHRFMS++EQR+E  D+R+QYL+ AAEPYE IAFKVPS E
Sbjct: 128 GQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSRE 187

Query: 186 IDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAP------GVPQRP- 245
           IDK+  KF++HW+ ++K F LQ +FK + P A  P  P  P G   P      G+P RP 
Sbjct: 188 IDKAEGKFWTHWNRETKQFFLQFHFKMEKPPA-PPSLPAGPPGVKRPPPPLMNGLPPRPP 247

Query: 246 ----LPPPPHA-----PPPPQGPPPNAPSGNPPRMPPP-----PPPSM----GNGMRPMP 305
               LPPPP       P PP GP P+ P G PP++PPP     PP  +     +G+ P  
Sbjct: 248 LPESLPPPPPGGLPLPPMPPTGPAPSGPPG-PPQLPPPAPGVHPPAPVVHPPASGVHPPA 307

Query: 306 PG----APSAPPPPPANF--TMGNQPPPPPQGFPGQHMQPPPP 318
           PG    AP   PP P     T G  PP P    P   + PP P
Sbjct: 308 PGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAP 348

[Close]

BLAST of Spo11682.1 vs. ExPASy Swiss-Prot
Match: SF3A2_RAT (Splicing factor 3A subunit 2 OS=Rattus norvegicus GN=Sf3a2 PE=2 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.400e-77
Identity = 190/317 (59.94%), Postives = 221/317 (69.72%), Query Frame = 1


		  
Query: 6   GSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEG 65
           G K GSGG A+S     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG
Sbjct: 8   GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEG 67

Query: 66  NYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQFDPET 125
           +YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV ++K VKIGRPGY+VTKQ D E 
Sbjct: 68  SYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVTKQRDTEM 127

Query: 126 KQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFKVPSTE 185
            Q+SLLFQI+YPEI +   PRHRFMS++EQR+E  D+R+QYL+ AAEPYE IAFKVPS E
Sbjct: 128 GQQSLLFQIDYPEIAEGVMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSRE 187

Query: 186 IDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLPP---- 245
           IDK+  KF++HW+ ++K F LQ +FK + P    P PP  P G   PGV +RP PP    
Sbjct: 188 IDKAEGKFWTHWNRETKQFFLQFHFKMEKP----PAPPSLPAG--PPGV-KRPPPPLMNG 247

Query: 246 PPHAPPPPQGPPPNAPSGNPPRMPPPPPPSMGNGMRPM-PPGAPSAPPPPPANFTMGNQP 305
            P  PP P   PP  P G P  +PP PP     G  P  PPG P  PPP P     G  P
Sbjct: 248 LPPRPPLPDALPPPPPGGLP--LPPMPP----TGPAPSGPPGPPQMPPPAP-----GVHP 306

Query: 306 PPPPQGFPGQHMQPPPP 318
           P P    P   + PP P
Sbjct: 308 PAPVVHPPTSGVHPPAP 306

[Close]

BLAST of Spo11682.1 vs. ExPASy Swiss-Prot
Match: SF3A2_BOVIN (Splicing factor 3A subunit 2 OS=Bos taurus GN=SF3A2 PE=2 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 4.100e-77
Identity = 199/357 (55.74%), Postives = 237/357 (66.39%), Query Frame = 1


		  
Query: 6   GSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEG 65
           G K GSGG A+S     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG
Sbjct: 8   GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEG 67

Query: 66  NYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQFDPET 125
           +YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV ++K VKIGRPGY+VTKQ D E 
Sbjct: 68  SYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVTKQRDTEM 127

Query: 126 KQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFKVPSTE 185
            Q+SLLFQI+YPEI +   PRHRFMS++EQR+E  D+R+QYL+ AAEPYE IAFKVPS E
Sbjct: 128 GQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSRE 187

Query: 186 IDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAP------GVPQRP- 245
           IDK+  KF++HW+ ++K F LQ +FK + P A  P  P  P G   P      G+P RP 
Sbjct: 188 IDKAEGKFWTHWNRETKQFFLQFHFKMEKPPA-PPSLPAGPPGVKRPPPPLMNGLPPRPP 247

Query: 246 ----LPPPPHA-----PPPPQGPPPNAPSGNPPRMPPP-----PPPSM----GNGMRPMP 305
               LPPPP       P PP GP P+ P G PP++PPP     PP  +     +G+ P  
Sbjct: 248 LPESLPPPPPGGLPLPPMPPSGPAPSGPPG-PPQLPPPAPGVHPPAPVVHPPASGVHPPA 307

Query: 306 PG----APSAPPP-----PPANF----TMGNQPPPPPQGFPGQHMQPPPP---PPPN 322
           PG    AP   PP     PPA+       G  PP P    P   + PP P   PPP+
Sbjct: 308 PGVHPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPS 362

[Close]

BLAST of Spo11682.1 vs. ExPASy Swiss-Prot
Match: SF3A2_MOUSE (Splicing factor 3A subunit 2 OS=Mus musculus GN=Sf3a2 PE=1 SV=2)

HSP 1 Score: 273.1 bits (697), Expect = 3.900e-72
Identity = 189/336 (56.25%), Postives = 219/336 (65.18%), Query Frame = 1


		  
Query: 6   GSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEG 65
           G K GSGG A+S     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG
Sbjct: 8   GGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNNEG 67

Query: 66  NYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQFDPET 125
           +YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P + KV ++K VKIGRPGY+VTKQ D E 
Sbjct: 68  SYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEQVKVEVKKFVKIGRPGYKVTKQRDTEM 127

Query: 126 KQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFKVPSTE 185
            Q+SLLFQI+YPEI +   PRHRFMS++EQR+E  D+R+QYL+ AAEPYE IAFKVPS E
Sbjct: 128 GQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSRE 187

Query: 186 IDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAP------GVPQRP- 245
           IDK+  KFF           LQ +FK + P A  P  P  P G   P      G+P RP 
Sbjct: 188 IDKAEGKFFF----------LQFHFKMEKPPA-PPSLPAGPPGVKRPPPPLMNGLPPRPP 247

Query: 246 ----LPPPPHA-----PPPPQGPPPNAPSGNPPRMPP------PPPPSMGNGMRPMPPGA 305
               LPPPP       P PP GP P+ P G PP+MPP      PP P +      + P A
Sbjct: 248 LPDALPPPPPGGLPLPPMPPTGPAPSGPPG-PPQMPPPAPGVHPPAPVVHPPTSGVHPPA 307

Query: 306 PSAPPPPPANF--TMGNQPPPPPQGFPGQHMQPPPP 318
           P   PP P     T G  PP P    P   + PP P
Sbjct: 308 PGVHPPAPVVHPPTSGVHPPAPGVHPPTPGVHPPAP 331

[Close]

BLAST of Spo11682.1 vs. ExPASy Swiss-Prot
Match: SF3A2_DICDI (Splicing factor 3A subunit 2 OS=Dictyostelium discoideum GN=sf3a2 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 3.800e-67
Identity = 131/214 (61.21%), Postives = 169/214 (78.97%), Query Frame = 1


		  
Query: 4   EWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNN 63
           E+G K GSGG  +SQ + IDRRER ++L LE +D++KDPY + NH+GS+EC+LCLT+HNN
Sbjct: 3   EYG-KAGSGGLQSSQYDNIDRRERQKQLVLEHVDVSKDPYIISNHIGSFECRLCLTVHNN 62

Query: 64  EGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPN---KRKVNLRKTVKIGRPGYRVTKQ 123
            GNYLAHTQGK+HQT+LA+RAA+E +E P+  + N     +V  +KT+KIGRPGY++ KQ
Sbjct: 63  VGNYLAHTQGKKHQTHLARRAAKEQRENPSVSKNNYIQTTRVIHKKTIKIGRPGYKIIKQ 122

Query: 124 FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFK 183
            D +T Q SLLFQI+YPEIE   +PRHR MS+FEQRVE  +K +QYL+FAAEPYE IAFK
Sbjct: 123 RDSKTGQLSLLFQIDYPEIESGLQPRHRIMSAFEQRVEQPNKDYQYLLFAAEPYETIAFK 182

Query: 184 VPSTEIDKST---AKFFSHWDPDSKMFTLQLYFK 212
           +P+ EID++T    KFF+HWD  +K FTLQLYFK
Sbjct: 183 IPNKEIDRTTGPDGKFFTHWD-RNKTFTLQLYFK 214

[Close]

BLAST of Spo11682.1 vs. TAIR (Arabidopsis)
Match: AT2G32600.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 409.1 bits (1050), Expect = 2.600e-114
Identity = 222/288 (77.08%), Postives = 237/288 (82.29%), Query Frame = 1


		  
Query: 1   MDREWGSKPGSGGAATSQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60
           MDREWGSKPGSGGAA+ QNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL
Sbjct: 1   MDREWGSKPGSGGAASGQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTL 60

Query: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPNKRKVNLRKTVKIGRPGYRVTKQ 120
           HNNEGNYLAHTQGKRHQTNLAKRAAREAK+AP +PQP KR V++R+TVKIGRPGYRVTKQ
Sbjct: 61  HNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPTKPQPLKRNVSVRRTVKIGRPGYRVTKQ 120

Query: 121 FDPETKQRSLLFQIEYPEIEDNTKPRHRFMSSFEQRVEAVDKRFQYLMFAAEPYEIIAFK 180
           +DPE +QRSLLFQIEYPEIEDN KPRHRFMSS+EQ+V+  DK +QYL+FAAEPYEIIAFK
Sbjct: 121 YDPELQQRSLLFQIEYPEIEDNIKPRHRFMSSYEQKVQPYDKSYQYLLFAAEPYEIIAFK 180

Query: 181 VPSTEIDKSTAKFFSHWDPDSKMFTLQLYFKPKPPEANKPQPPPAPNGTSAPGVPQRPLP 240
           VPSTE+DKST KFFSHWDPDSKMFTLQ+YFKP  PE NKPQ     NG          LP
Sbjct: 181 VPSTEVDKSTPKFFSHWDPDSKMFTLQVYFKPTKPEPNKPQSAVGANG----------LP 240

Query: 241 PPPHAPPPPQGPPPNAPSGNPPRMPPPPPPSMGNGMRPMPPGAPSAPP 289
           PPP  PP    PPP  PSG     PPPPPP   NG RPMPP      P
Sbjct: 241 PPPPPPPHQAQPPPPPPSG---LFPPPPPPMANNGFRPMPPAGGFGHP 275

The following BLAST results are available for this feature:

BLAST of Spo11682.1 vs. NCBI nr
BLAST of Spo11682.1 vs. UniProtKB/TrEMBL
BLAST of Spo11682.1 vs. ExPASy Swiss-Prot
BLAST of Spo11682.1 vs. TAIR (Arabidopsis)

BLAST of Spo11682.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902165294\|gb\|KNA07094.1\|	1.2e-172	99.0	hypothetical protein SOVF_1750...	[more]
gi\|731368751\|ref\|XP_010696318.1\|	7.3e-159	92.7	PREDICTED: splicing factor 3A ...	[more]
gi\|645272389\|ref\|XP_008241372.1\|	6.8e-141	83.5	PREDICTED: splicing factor 3A ...	[more]
gi\|595805533\|ref\|XP_007202310.1\|	1.5e-140	83.2	hypothetical protein PRUPE_ppa...	[more]
gi\|1009175642\|ref\|XP_015868997.1\|	1.1e-138	82.9	PREDICTED: splicing factor 3A ...	[more]

BLAST of Spo11682.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QIL8_SPIOL	8.0e-173	99.0	Uncharacterized protein OS=Spi...	[more]
A0A0J8B7U4_BETVU	5.1e-159	92.7	Uncharacterized protein OS=Bet...	[more]
M5VQI0_PRUPE	1.1e-140	83.2	Uncharacterized protein OS=Pru...	[more]
A0A061ET11_THECC	4.2e-137	81.9	Hydroxyproline-rich glycoprote...	[more]
A0A0D2S491_GOSRA	3.9e-135	80.9	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo11682.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
SF3A2_HUMAN	1.7e-78	56.8	Splicing factor 3A subunit 2 O...	[more]
SF3A2_RAT	1.4e-77	59.9	Splicing factor 3A subunit 2 O...	[more]
SF3A2_BOVIN	4.1e-77	55.7	Splicing factor 3A subunit 2 O...	[more]
SF3A2_MOUSE	3.9e-72	56.2	Splicing factor 3A subunit 2 O...	[more]
SF3A2_DICDI	3.8e-67	61.2	Splicing factor 3A subunit 2 O...	[more]

BLAST of Spo11682.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G32600.1	2.6e-114	77.0	hydroxyproline-rich glycoprote...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000690	Zinc finger, C2H2-type matrin	PROFILE	PS50171	ZF_MATRIN	coord: 52..82 score: 9
IPR003604	Zinc finger, U1-type	SMART	SM00451	ZnF_U1_5	coord: 49..83 score: 9.
None	No IPR available	PANTHER	PTHR23205	SPLICING FACTOR 3A SUBUNIT 2	coord: 2..308 score: 1.0E
None	No IPR available	PANTHER	PTHR23205:SF0	SPLICING FACTOR 3A SUBUNIT 2	coord: 2..308 score: 1.0E
None	No IPR available	PFAM	PF12874	zf-met	coord: 52..76 score: 1.
None	No IPR available	SMART	SM01050	CactinC_cactus_3	coord: 89..217 score: 1.8
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 48..83 score: 1.2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051604	protein maturation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005515	protein binding