Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCTGCTTTAATTGCATTAACCTAAGTTTTCTCATTTAACTTGTATTAGAAGAATAAGAAAGAGAGAGAGAGAAAAATAAAAATCCATTTTGAAAAAAAAGAAGCCATGGATGATAAAACTTCCCCTAGTTTCGAATTACCCGGTTTTCGGTTCCATCCTACCGAAGAAGAACTACTAGACTTTTACCTTAAGAACATGGTTAATGGAAGAAAAATGTATCATGATATAATCGGATTTCTTAACATATATCGATTCGATCCTTGGGATTTACCAGGTTTGTCCATTCATTCATATTTTTGCTATGGAATTATTATTTACAATAAGTTTCTATTCAATAACATGCAGCTATCAAAGACATAATATCAATAATAAGTAATTGATTATTTTGTTTTGGTTTGATATTTGGTGTAGTTTTTGTATGTATGTCTGAACATGTTAAATGAAATGAAAATGCAGGGTTGGCAAAAATAGGAGAAAGAGAGTGGTACTTCTTTGTTCCAAGAGACAGGAAGCAGAGCAATGGTGGGAGGCCAAACAGAACCACAGAACATGGGTTTTGGAAGGCTACAGGTTCAGACAGAAAGATTGTGAGCTTGTCAGAACCTAAACGGGTTATCGGGTTAAGGAAGACTCTTGTGTTCTACAAAGGTAGAGCACCAAGAGGTTCCAAGACTGATTGGATTATGAATGAATACCGCCTCCCTGATAATATTGTTTTACCAAAGGTATGTCGTTTCATTATCAATTTCAATGTAAATAACTAACAATCTCAATTTAAATATCAATTTTAATCATACATAACCATTCAAGTTAGACATCTAGTGTTTTTTTTGTTCTACCCTTGACTACAAGTCGATCTAATGGTTTGGAAATGTTGATGCAGGACATTGTATTGTGCAAGATATACAGGAAGGCAACCTCACTAAAAGAACTTGAACAGAGAGCAGCCAAAGAAGAAGAGAAATCAACAAATGGATTTGCATATTCATATCCCACATCTCCTCTCTCTTCATCAAATGAAACTTACTCTTTTCTCGATGCTGCTACTGCTAATGCTAACGCTAACGCTAATGATGTTAATGCGAATGTGAATGTGAATGTGAATGCGAATGCGAATGCTAGTGGTCAATTTTTCCAAGACTTTTTTACACCAATGTCTACAAATGATATGATCACTACTTTGAAGAAGGAAGATCAAACTCCTTTTGTGGAGACCAATTGTAGCCAAGTAGCTGCTGCTAAGAATGTTACTTCTAATACTATACAACTACCCTTTGGAAAAGAGAACTTAGAGCTCCAAGTTCCTAAATCGGGCATGGATTGGGCCCAAGACCCGCTTTTCTCATTGTCATGCAGCCCATGGCTTGAGAATTTATTGAACTTCGCTAGCCCAACTCTAATTTCCCAAACTTGTAATCAACTCTACTTTATTACTTAGTTGTGCAAGATTGATTTCACTAATTTGAGTTAAATTAGTTGAGCTTCTCTGTTGTTTTGTTCCCATCACTATCCTCCCTTCCTATTTCATCAAGAATATGAAAGTTGTGGAGGGAAGAGATGGTTGTTTGGTTCTACAAGTCTGTGAAAAAAGAAATTGGCATATAATAAAGTATAGTAATAATATATAGTTAGTTTACTAATTTGTTAAGTGTATTCATAAACATATACTAGTC TCCTGCTTTAATTGCATTAACCTAAGTTTTCTCATTTAACTTGTATTAGAAGAATAAGAAAGAGAGAGAGAGAAAAATAAAAATCCATTTTGAAAAAAAAGAAGCCATGGATGATAAAACTTCCCCTAGTTTCGAATTACCCGGTTTTCGGTTCCATCCTACCGAAGAAGAACTACTAGACTTTTACCTTAAGAACATGGTTAATGGAAGAAAAATGTATCATGATATAATCGGATTTCTTAACATATATCGATTCGATCCTTGGGATTTACCAGGGTTGGCAAAAATAGGAGAAAGAGAGTGGTACTTCTTTGTTCCAAGAGACAGGAAGCAGAGCAATGGTGGGAGGCCAAACAGAACCACAGAACATGGGTTTTGGAAGGCTACAGGTTCAGACAGAAAGATTGTGAGCTTGTCAGAACCTAAACGGGTTATCGGGTTAAGGAAGACTCTTGTGTTCTACAAAGGTAGAGCACCAAGAGGTTCCAAGACTGATTGGATTATGAATGAATACCGCCTCCCTGATAATATTGTTTTACCAAAGGACATTGTATTGTGCAAGATATACAGGAAGGCAACCTCACTAAAAGAACTTGAACAGAGAGCAGCCAAAGAAGAAGAGAAATCAACAAATGGATTTGCATATTCATATCCCACATCTCCTCTCTCTTCATCAAATGAAACTTACTCTTTTCTCGATGCTGCTACTGCTAATGCTAACGCTAACGCTAATGATGTTAATGCGAATGTGAATGTGAATGTGAATGCGAATGCGAATGCTAGTGGTCAATTTTTCCAAGACTTTTTTACACCAATGTCTACAAATGATATGATCACTACTTTGAAGAAGGAAGATCAAACTCCTTTTGTGGAGACCAATTGTAGCCAAGTAGCTGCTGCTAAGAATGTTACTTCTAATACTATACAACTACCCTTTGGAAAAGAGAACTTAGAGCTCCAAGTTCCTAAATCGGGCATGGATTGGGCCCAAGACCCGCTTTTCTCATTGTCATGCAGCCCATGGCTTGAGAATTTATTGAACTTCGCTAGCCCAACTCTAATTTCCCAAACTTGTAATCAACTCTACTTTATTACTTAGTTGTGCAAGATTGATTTCACTAATTTGAGTTAAATTAGTTGAGCTTCTCTGTTGTTTTGTTCCCATCACTATCCTCCCTTCCTATTTCATCAAGAATATGAAAGTTGTGGAGGGAAGAGATGGTTGTTTGGTTCTACAAGTCTGTGAAAAAAGAAATTGGCATATAATAAAGTATAGTAATAATATATAGTTAGTTTACTAATTTGTTAAGTGTATTCATAAACATATACTAGTC ATGGATGATAAAACTTCCCCTAGTTTCGAATTACCCGGTTTTCGGTTCCATCCTACCGAAGAAGAACTACTAGACTTTTACCTTAAGAACATGGTTAATGGAAGAAAAATGTATCATGATATAATCGGATTTCTTAACATATATCGATTCGATCCTTGGGATTTACCAGGGTTGGCAAAAATAGGAGAAAGAGAGTGGTACTTCTTTGTTCCAAGAGACAGGAAGCAGAGCAATGGTGGGAGGCCAAACAGAACCACAGAACATGGGTTTTGGAAGGCTACAGGTTCAGACAGAAAGATTGTGAGCTTGTCAGAACCTAAACGGGTTATCGGGTTAAGGAAGACTCTTGTGTTCTACAAAGGTAGAGCACCAAGAGGTTCCAAGACTGATTGGATTATGAATGAATACCGCCTCCCTGATAATATTGTTTTACCAAAGGACATTGTATTGTGCAAGATATACAGGAAGGCAACCTCACTAAAAGAACTTGAACAGAGAGCAGCCAAAGAAGAAGAGAAATCAACAAATGGATTTGCATATTCATATCCCACATCTCCTCTCTCTTCATCAAATGAAACTTACTCTTTTCTCGATGCTGCTACTGCTAATGCTAACGCTAACGCTAATGATGTTAATGCGAATGTGAATGTGAATGTGAATGCGAATGCGAATGCTAGTGGTCAATTTTTCCAAGACTTTTTTACACCAATGTCTACAAATGATATGATCACTACTTTGAAGAAGGAAGATCAAACTCCTTTTGTGGAGACCAATTGTAGCCAAGTAGCTGCTGCTAAGAATGTTACTTCTAATACTATACAACTACCCTTTGGAAAAGAGAACTTAGAGCTCCAAGTTCCTAAATCGGGCATGGATTGGGCCCAAGACCCGCTTTTCTCATTGTCATGCAGCCCATGGCTTGAGAATTTATTGAACTTCGCTAGCCCAACTCTAATTTCCCAAACTTGTAATCAACTCTACTTTATTACTTAG MDDKTSPSFELPGFRFHPTEEELLDFYLKNMVNGRKMYHDIIGFLNIYRFDPWDLPGLAKIGEREWYFFVPRDRKQSNGGRPNRTTEHGFWKATGSDRKIVSLSEPKRVIGLRKTLVFYKGRAPRGSKTDWIMNEYRLPDNIVLPKDIVLCKIYRKATSLKELEQRAAKEEEKSTNGFAYSYPTSPLSSSNETYSFLDAATANANANANDVNANVNVNVNANANASGQFFQDFFTPMSTNDMITTLKKEDQTPFVETNCSQVAAAKNVTSNTIQLPFGKENLELQVPKSGMDWAQDPLFSLSCSPWLENLLNFASPTLISQTCNQLYFIT Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo11776.1 vs. NCBI nr
Match: gi|902190237|gb|KNA11568.1| (hypothetical protein SOVF_133980 [Spinacia oleracea]) HSP 1 Score: 671.4 bits (1731), Expect = 8.100e-190 Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 1
BLAST of Spo11776.1 vs. NCBI nr
Match: gi|731357542|ref|XP_010690266.1| (PREDICTED: NAC domain-containing protein 67 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 463.4 bits (1191), Expect = 3.400e-127 Identity = 243/321 (75.70%), Postives = 264/321 (82.24%), Query Frame = 1
BLAST of Spo11776.1 vs. NCBI nr
Match: gi|197312895|gb|ACH63228.1| (NAC protein [Rheum australe]) HSP 1 Score: 328.9 bits (842), Expect = 9.900e-87 Identity = 181/326 (55.52%), Postives = 224/326 (68.71%), Query Frame = 1
BLAST of Spo11776.1 vs. NCBI nr
Match: gi|1021489750|ref|XP_016187883.1| (PREDICTED: NAC transcription factor 29 [Arachis ipaensis]) HSP 1 Score: 328.6 bits (841), Expect = 1.300e-86 Identity = 181/312 (58.01%), Postives = 213/312 (68.27%), Query Frame = 1
BLAST of Spo11776.1 vs. NCBI nr
Match: gi|1012034140|ref|XP_015952734.1| (PREDICTED: NAC transcription factor 29 [Arachis duranensis]) HSP 1 Score: 328.2 bits (840), Expect = 1.700e-86 Identity = 184/312 (58.97%), Postives = 216/312 (69.23%), Query Frame = 1
BLAST of Spo11776.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXX3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_133980 PE=4 SV=1) HSP 1 Score: 671.4 bits (1731), Expect = 5.600e-190 Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 1
BLAST of Spo11776.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BMT3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g212910 PE=4 SV=1) HSP 1 Score: 463.4 bits (1191), Expect = 2.300e-127 Identity = 243/321 (75.70%), Postives = 264/321 (82.24%), Query Frame = 1
BLAST of Spo11776.1 vs. UniProtKB/TrEMBL
Match: B5M1X9_RHEAU (NAC protein OS=Rheum australe PE=2 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 6.900e-87 Identity = 181/326 (55.52%), Postives = 224/326 (68.71%), Query Frame = 1
BLAST of Spo11776.1 vs. UniProtKB/TrEMBL
Match: A0A0B2PNZ1_GLYSO (Putative NAC domain-containing protein 94 OS=Glycine soja GN=glysoja_043115 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 2.600e-86 Identity = 181/321 (56.39%), Postives = 224/321 (69.78%), Query Frame = 1
BLAST of Spo11776.1 vs. UniProtKB/TrEMBL
Match: A0A0R4J4G2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G096600 PE=4 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 3.400e-86 Identity = 181/321 (56.39%), Postives = 224/321 (69.78%), Query Frame = 1
BLAST of Spo11776.1 vs. ExPASy Swiss-Prot
Match: NAC35_ARATH (NAC domain-containing protein 35 OS=Arabidopsis thaliana GN=NAC035 PE=1 SV=2) HSP 1 Score: 193.7 bits (491), Expect = 3.100e-48 Identity = 108/267 (40.45%), Postives = 162/267 (60.67%), Query Frame = 1
BLAST of Spo11776.1 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.200e-44 Identity = 85/145 (58.62%), Postives = 108/145 (74.48%), Query Frame = 1
BLAST of Spo11776.1 vs. ExPASy Swiss-Prot
Match: FEZ_ARATH (Protein FEZ OS=Arabidopsis thaliana GN=FEZ PE=2 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 5.700e-42 Identity = 99/229 (43.23%), Postives = 132/229 (57.64%), Query Frame = 1
BLAST of Spo11776.1 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2) HSP 1 Score: 169.1 bits (427), Expect = 8.200e-41 Identity = 80/154 (51.95%), Postives = 105/154 (68.18%), Query Frame = 1
BLAST of Spo11776.1 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.100e-40 Identity = 92/195 (47.18%), Postives = 122/195 (62.56%), Query Frame = 1
BLAST of Spo11776.1 vs. TAIR (Arabidopsis)
Match: AT2G17040.1 (NAC domain containing protein 36) HSP 1 Score: 300.4 bits (768), Expect = 1.300e-81 Identity = 173/302 (57.28%), Postives = 203/302 (67.22%), Query Frame = 1
BLAST of Spo11776.1 vs. TAIR (Arabidopsis)
Match: AT2G02450.2 (NAC domain containing protein 35) HSP 1 Score: 193.7 bits (491), Expect = 1.700e-49 Identity = 108/267 (40.45%), Postives = 162/267 (60.67%), Query Frame = 1
BLAST of Spo11776.1 vs. TAIR (Arabidopsis)
Match: AT5G39820.1 (NAC domain containing protein 94) HSP 1 Score: 181.8 bits (460), Expect = 6.900e-46 Identity = 85/145 (58.62%), Postives = 108/145 (74.48%), Query Frame = 1
BLAST of Spo11776.1 vs. TAIR (Arabidopsis)
Match: AT1G65910.1 (NAC domain containing protein 28) HSP 1 Score: 173.3 bits (438), Expect = 2.400e-43 Identity = 81/174 (46.55%), Postives = 120/174 (68.97%), Query Frame = 1
BLAST of Spo11776.1 vs. TAIR (Arabidopsis)
Match: AT1G26870.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) HSP 1 Score: 172.9 bits (437), Expect = 3.200e-43 Identity = 99/229 (43.23%), Postives = 132/229 (57.64%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo11776.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo11776.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo11776.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo11776.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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