Spo11789.1 (mRNA) | SpinachBase

Overview


Name	Spo11789.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	SAUR-like auxin-responsive protein family, putative
Location	chr4 : 111752479 .. 111752895 (+)
Sequence length	417

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAGTTCAAAGAAACTTGTCCAAATGGCAAGGAAATGGCAAAAGCTAGCAGCAGCTAGCAGAAAAAGAATATCTTGGCCAGCATCAAAAGTTGCTGACAAGGGTCATTTCATCGTTTACACAATAGATGGTGAACGATTTATGATTCCTTTAACATATCTCAGAAGTGAGATTGTTACACAGCTCTTTCTAATGGCAGAAGAAGAGTTTGGATTAACAGCTGATAGACCTATTACATTACCATGTGATTCTACTTTCATGGAGTATGCCATCTCAATTCTCCAAAGACAAACAACCAAGGAGTTTGAGAATGCGCTTATCTTGTCCATGAGTAATACCTGCCACTCGACATCATCATCGTCATGTTTACAGCAAGAGAAGATCAGCCAGCATTTACTTGTTCAGGGCTTCTAG

mRNA sequence

ATGATCAGTTCAAAGAAACTTGTCCAAATGGCAAGGAAATGGCAAAAGCTAGCAGCAGCTAGCAGAAAAAGAATATCTTGGCCAGCATCAAAAGTTGCTGACAAGGGTCATTTCATCGTTTACACAATAGATGGTGAACGATTTATGATTCCTTTAACATATCTCAGAAGTGAGATTGTTACACAGCTCTTTCTAATGGCAGAAGAAGAGTTTGGATTAACAGCTGATAGACCTATTACATTACCATGTGATTCTACTTTCATGGAGTATGCCATCTCAATTCTCCAAAGACAAACAACCAAGGAGTTTGAGAATGCGCTTATCTTGTCCATGAGTAATACCTGCCACTCGACATCATCATCGTCATGTTTACAGCAAGAGAAGATCAGCCAGCATTTACTTGTTCAGGGCTTCTAG

Coding sequence (CDS)

ATGATCAGTTCAAAGAAACTTGTCCAAATGGCAAGGAAATGGCAAAAGCTAGCAGCAGCTAGCAGAAAAAGAATATCTTGGCCAGCATCAAAAGTTGCTGACAAGGGTCATTTCATCGTTTACACAATAGATGGTGAACGATTTATGATTCCTTTAACATATCTCAGAAGTGAGATTGTTACACAGCTCTTTCTAATGGCAGAAGAAGAGTTTGGATTAACAGCTGATAGACCTATTACATTACCATGTGATTCTACTTTCATGGAGTATGCCATCTCAATTCTCCAAAGACAAACAACCAAGGAGTTTGAGAATGCGCTTATCTTGTCCATGAGTAATACCTGCCACTCGACATCATCATCGTCATGTTTACAGCAAGAGAAGATCAGCCAGCATTTACTTGTTCAGGGCTTCTAG

Protein sequence

MISSKKLVQMARKWQKLAAASRKRISWPASKVADKGHFIVYTIDGERFMIPLTYLRSEIVTQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSNTCHSTSSSSCLQQEKISQHLLVQGF

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo11789	Spo11789	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo11789.1	Spo11789.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11789.1.exon.1	Spo11789.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11789.1.CDS.1	Spo11789.1.CDS.1	CDS

Homology

[Close]

BLAST of Spo11789.1 vs. NCBI nr
Match: gi|870849034|gb|KMT01297.1| (hypothetical protein BVRB_9g213130 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 207.2 bits (526), Expect = 1.800e-50
Identity = 104/138 (75.36%), Postives = 121/138 (87.68%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWPASKVADKGHFIVYTIDGERFMIPLTYLRSEIV 60
           MISSKKL+++ARKWQ+LAAASRKR+SWP SKV DKGHF++YT DG RFMIPLTYL+SEIV
Sbjct: 1   MISSKKLIKIARKWQRLAAASRKRVSWPGSKVVDKGHFVIYTTDGIRFMIPLTYLKSEIV 60

Query: 61  TQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSNTCHSTSS 120
           TQLF MAEEEFGL +D P+T+PCDSTF+EYAISILQR   K+FE ALILS+S TCH  SS
Sbjct: 61  TQLFRMAEEEFGLMSDGPLTVPCDSTFIEYAISILQRHAAKDFEKALILSLS-TCH--SS 120

Query: 121 SSCLQQEKISQHLLVQGF 139
           SSCLQQE+I+QHL +  F
Sbjct: 121 SSCLQQEQINQHLPIHSF 135

[Close]

BLAST of Spo11789.1 vs. NCBI nr
Match: gi|902203452|gb|KNA14562.1| (hypothetical protein SOVF_106460 [Spinacia oleracea])

HSP 1 Score: 168.3 bits (425), Expect = 9.300e-39
Identity = 85/138 (61.59%), Postives = 111/138 (80.43%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWPASKVADKGHFIVYTIDGERFMIPLTYLRSEIV 60
           MIS+KKL++MARKWQK+AAASRKRISWP   VADKGHF+VYT DG RF+IPL YL+SEI 
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRP-VADKGHFVVYTTDGRRFIIPLAYLKSEIF 60

Query: 61  TQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSNTCHSTSS 120
            +LF +AEEEFGLT+  PITLPCDS+FMEYAIS++QR+  ++ E ALI+S+++  +S+ S
Sbjct: 61  IELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYSSVS 120

Query: 121 SSCLQQEKISQHLLVQGF 139
                Q++ + HLL+  F
Sbjct: 121 HE--HQDQTNSHLLISSF 135

[Close]

BLAST of Spo11789.1 vs. NCBI nr
Match: gi|870849035|gb|KMT01298.1| (hypothetical protein BVRB_9g213140 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 167.5 bits (423), Expect = 1.600e-38
Identity = 88/137 (64.23%), Postives = 110/137 (80.29%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWPASKVADKGHFIVYTIDGERFMIPLTYLRSEIV 60
           MIS+KKL++MARKW+KLAAASR+RISWP   VA+KGHF++YT DG RFMIPL YL+SEI+
Sbjct: 1   MISTKKLLKMARKWKKLAAASRRRISWPTPIVANKGHFVIYTTDGRRFMIPLVYLKSEII 60

Query: 61  TQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSNTCHSTSS 120
            +LF MAEEEFGL ++ PITLPCDST MEYAISILQR    + E ALI+S+ ++C  + S
Sbjct: 61  RELFRMAEEEFGLISEGPITLPCDSTSMEYAISILQRHANGDLEKALIVSL-DSCRYSVS 120

Query: 121 SSCLQQE---KISQHLL 135
           SS LQQ+   K  Q+L+
Sbjct: 121 SSKLQQDYNNKDQQYLI 136

[Close]

BLAST of Spo11789.1 vs. NCBI nr
Match: gi|731357566|ref|XP_010690279.1| (PREDICTED: uncharacterized protein LOC104903852 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 159.8 bits (403), Expect = 3.300e-36
Identity = 83/138 (60.14%), Postives = 110/138 (79.71%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWPASKVADKGHFIVYTIDGERFMIPLTYLRSEIV 60
           MIS+KKL++MARKWQK+AAASRKRISWP S +A++GHF+VYT DG RFMIPL YL++EI 
Sbjct: 1   MISTKKLIKMARKWQKIAAASRKRISWPRS-LANEGHFVVYTTDGRRFMIPLKYLKTEIF 60

Query: 61  TQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSNTCHSTSS 120
            +LF +A+EE+G+T+  PITLPCDS FMEY IS++QR  T++ E ALI+S++  C   SS
Sbjct: 61  IELFKIADEEYGVTSAGPITLPCDSEFMEYMISMVQRHVTEDLEKALIMSLA-AC-KYSS 120

Query: 121 SSCLQQEKISQHLLVQGF 139
            S   QE+++ HLL+  F
Sbjct: 121 LSLENQEQMNPHLLICSF 135

[Close]

BLAST of Spo11789.1 vs. NCBI nr
Match: gi|902210322|gb|KNA16394.1| (hypothetical protein SOVF_089570 [Spinacia oleracea])

HSP 1 Score: 157.9 bits (398), Expect = 1.300e-35
Identity = 80/138 (57.97%), Postives = 108/138 (78.26%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWPASKVADKGHFIVYTIDGERFMIPLTYLRSEIV 60
           MIS+KKL++MARKWQK+AAASRKRISWP   VADKGHF+VYT DG RF+IPL YL++EI 
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRP-VADKGHFVVYTTDGRRFIIPLAYLKNEIF 60

Query: 61  TQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSNTCHSTSS 120
            +LF +AEEEFGLT+  PITLPCDS+FMEY ISI+QR+  ++   ALI+S+++  +S+ +
Sbjct: 61  IELFRIAEEEFGLTSTGPITLPCDSSFMEYTISIIQRRVAEDLGKALIMSLASCRYSSVT 120

Query: 121 SSCLQQEKISQHLLVQGF 139
                Q++ +  +L+  F
Sbjct: 121 HE--YQDQTNSQVLISSF 135

[Close]

BLAST of Spo11789.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJV3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g213130 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.300e-50
Identity = 104/138 (75.36%), Postives = 121/138 (87.68%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWPASKVADKGHFIVYTIDGERFMIPLTYLRSEIV 60
           MISSKKL+++ARKWQ+LAAASRKR+SWP SKV DKGHF++YT DG RFMIPLTYL+SEIV
Sbjct: 1   MISSKKLIKIARKWQRLAAASRKRVSWPGSKVVDKGHFVIYTTDGIRFMIPLTYLKSEIV 60

Query: 61  TQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSNTCHSTSS 120
           TQLF MAEEEFGL +D P+T+PCDSTF+EYAISILQR   K+FE ALILS+S TCH  SS
Sbjct: 61  TQLFRMAEEEFGLMSDGPLTVPCDSTFIEYAISILQRHAAKDFEKALILSLS-TCH--SS 120

Query: 121 SSCLQQEKISQHLLVQGF 139
           SSCLQQE+I+QHL +  F
Sbjct: 121 SSCLQQEQINQHLPIHSF 135

[Close]

BLAST of Spo11789.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R709_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_106460 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.500e-39
Identity = 85/138 (61.59%), Postives = 111/138 (80.43%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWPASKVADKGHFIVYTIDGERFMIPLTYLRSEIV 60
           MIS+KKL++MARKWQK+AAASRKRISWP   VADKGHF+VYT DG RF+IPL YL+SEI 
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRP-VADKGHFVVYTTDGRRFIIPLAYLKSEIF 60

Query: 61  TQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSNTCHSTSS 120
            +LF +AEEEFGLT+  PITLPCDS+FMEYAIS++QR+  ++ E ALI+S+++  +S+ S
Sbjct: 61  IELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYSSVS 120

Query: 121 SSCLQQEKISQHLLVQGF 139
                Q++ + HLL+  F
Sbjct: 121 HE--HQDQTNSHLLISSF 135

[Close]

BLAST of Spo11789.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BMP2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g213140 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.100e-38
Identity = 88/137 (64.23%), Postives = 110/137 (80.29%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWPASKVADKGHFIVYTIDGERFMIPLTYLRSEIV 60
           MIS+KKL++MARKW+KLAAASR+RISWP   VA+KGHF++YT DG RFMIPL YL+SEI+
Sbjct: 1   MISTKKLLKMARKWKKLAAASRRRISWPTPIVANKGHFVIYTTDGRRFMIPLVYLKSEII 60

Query: 61  TQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSNTCHSTSS 120
            +LF MAEEEFGL ++ PITLPCDST MEYAISILQR    + E ALI+S+ ++C  + S
Sbjct: 61  RELFRMAEEEFGLISEGPITLPCDSTSMEYAISILQRHANGDLEKALIVSL-DSCRYSVS 120

Query: 121 SSCLQQE---KISQHLL 135
           SS LQQ+   K  Q+L+
Sbjct: 121 SSKLQQDYNNKDQQYLI 136

[Close]

BLAST of Spo11789.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BMV1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g213060 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.300e-36
Identity = 83/138 (60.14%), Postives = 110/138 (79.71%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWPASKVADKGHFIVYTIDGERFMIPLTYLRSEIV 60
           MIS+KKL++MARKWQK+AAASRKRISWP S +A++GHF+VYT DG RFMIPL YL++EI 
Sbjct: 1   MISTKKLIKMARKWQKIAAASRKRISWPRS-LANEGHFVVYTTDGRRFMIPLKYLKTEIF 60

Query: 61  TQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSNTCHSTSS 120
            +LF +A+EE+G+T+  PITLPCDS FMEY IS++QR  T++ E ALI+S++  C   SS
Sbjct: 61  IELFKIADEEYGVTSAGPITLPCDSEFMEYMISMVQRHVTEDLEKALIMSLA-AC-KYSS 120

Query: 121 SSCLQQEKISQHLLVQGF 139
            S   QE+++ HLL+  F
Sbjct: 121 LSLENQEQMNPHLLICSF 135

[Close]

BLAST of Spo11789.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBK5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_089570 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 8.800e-36
Identity = 80/138 (57.97%), Postives = 108/138 (78.26%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWPASKVADKGHFIVYTIDGERFMIPLTYLRSEIV 60
           MIS+KKL++MARKWQK+AAASRKRISWP   VADKGHF+VYT DG RF+IPL YL++EI 
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRP-VADKGHFVVYTTDGRRFIIPLAYLKNEIF 60

Query: 61  TQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSNTCHSTSS 120
            +LF +AEEEFGLT+  PITLPCDS+FMEY ISI+QR+  ++   ALI+S+++  +S+ +
Sbjct: 61  IELFRIAEEEFGLTSTGPITLPCDSSFMEYTISIIQRRVAEDLGKALIMSLASCRYSSVT 120

Query: 121 SSCLQQEKISQHLLVQGF 139
                Q++ +  +L+  F
Sbjct: 121 HE--YQDQTNSQVLISSF 135

[Close]

BLAST of Spo11789.1 vs. ExPASy Swiss-Prot
Match: SAU67_ARATH (Auxin-responsive protein SAUR67 OS=Arabidopsis thaliana GN=SAUR67 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 9.000e-26
Identity = 67/142 (47.18%), Postives = 95/142 (66.90%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWPASKV-------ADKGHFIVYTIDGERFMIPLT 60
           MI++KKL++MA+KWQ+ AA  RKRIS+  S V        +KG F+VYT D  RF  P++
Sbjct: 2   MINAKKLMKMAKKWQQRAALHRKRISFQRSNVFTSSSSTVEKGCFVVYTADKIRFAFPIS 61

Query: 61  YLRSEIVTQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSN 120
           YL + IV +L  ++EEEFGL  + PITLP DS F+EY I ++QR+   + E AL++S+S 
Sbjct: 62  YLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKALLMSIS- 121

Query: 121 TCHSTSSSSCLQQEKISQHLLV 136
           +   +   S LQQE+ +Q LLV
Sbjct: 122 SAKCSLQCSLLQQEQSTQQLLV 142

[Close]

BLAST of Spo11789.1 vs. ExPASy Swiss-Prot
Match: SAU39_ORYSJ (Auxin-responsive protein SAUR36 OS=Oryza sativa subsp. japonica GN=SAUR39 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.700e-24
Identity = 59/145 (40.69%), Postives = 94/145 (64.83%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWP----------ASKVADKGHFIVYTIDGERFMI 60
           MI+ K+LV +A+KWQ +AA  R+R++            +S +ADKGH I+YT DGERF +
Sbjct: 27  MINPKRLVHLAKKWQHMAALGRRRLTITGATKEGNLRCSSAIADKGHCIIYTADGERFGV 86

Query: 61  PLTYLRSEIVTQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILS 120
           PLTYL + +  +L  ++E+EFG T +  ITLPC++  MEY + +L+R+ ++E E A++ S
Sbjct: 87  PLTYLSTTVFGELLRLSEDEFGFTGEEKITLPCEAAVMEYVMCLLRRKPSEEVEQAVVSS 146

Query: 121 MSNTCHSTSSSSCLQQEKISQHLLV 136
           +   C+  SS+S +    +SQ L +
Sbjct: 147 VVMPCNYKSSTS-MVSVNLSQSLAI 170

[Close]

BLAST of Spo11789.1 vs. ExPASy Swiss-Prot
Match: SAU64_ARATH (Auxin-responsive protein SAUR64 OS=Arabidopsis thaliana GN=SAUR64 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.900e-24
Identity = 63/141 (44.68%), Postives = 92/141 (65.25%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWP------ASKVADKGHFIVYTIDGERFMIPLTY 60
           M+++KKL++MA+KWQ+ AA  RKRIS+       +S  A+KG F+VYT D  RF  PL+Y
Sbjct: 1   MMNTKKLIKMAKKWQQRAALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPLSY 60

Query: 61  LRSEIVTQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSNT 120
           L + +  +L  ++EEEFGL    PIT P DS F+EY I ++QR+   + E AL++S+S +
Sbjct: 61  LSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSIS-S 120

Query: 121 CHSTSSSSCLQQEKISQHLLV 136
              +S  S   QE+ +Q LLV
Sbjct: 121 ARCSSQCSLKLQERSTQQLLV 140

[Close]

BLAST of Spo11789.1 vs. ExPASy Swiss-Prot
Match: SAU62_ARATH (Auxin-responsive protein SAUR62 OS=Arabidopsis thaliana GN=SAUR62 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.800e-24
Identity = 65/142 (45.77%), Postives = 94/142 (66.20%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWPASKVA-------DKGHFIVYTIDGERFMIPLT 60
           MI++KKL+++A+KWQ+ AA  RKRIS+  S +        +KG F+VYT D  RF  PL+
Sbjct: 2   MINAKKLMKLAKKWQQRAALKRKRISFQRSSITTSSQTAVEKGCFVVYTADKIRFSFPLS 61

Query: 61  YLRSEIVTQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSN 120
           YL + IV +L  ++EEEFGL  + PITLP DS F+EY I+++QR+  ++ E AL+LS+S+
Sbjct: 62  YLSNTIVQELLKISEEEFGLPTEGPITLPFDSAFLEYLINLIQRRMDEDTEKALLLSISS 121

Query: 121 TCHSTSSSSCLQQEKISQHLLV 136
              + SS    Q    +Q LLV
Sbjct: 122 ---ARSSFQPQQHCSATQQLLV 140

[Close]

BLAST of Spo11789.1 vs. ExPASy Swiss-Prot
Match: SAU63_ARATH (Auxin-responsive protein SAUR63 OS=Arabidopsis thaliana GN=SAUR63 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.100e-23
Identity = 63/142 (44.37%), Postives = 92/142 (64.79%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWPASKV-------ADKGHFIVYTIDGERFMIPLT 60
           MI++KKL++MA+KWQ+ AA  RKRIS+  S V        +KG F+VYT D  RF  P++
Sbjct: 1   MINAKKLMKMAKKWQQRAALHRKRISFQRSSVFTSSSSTVEKGCFVVYTADKIRFAFPIS 60

Query: 61  YLRSEIVTQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSN 120
           YL + +V +L  ++EE+FGL  + PITLP DS F+EY + ++QR+  ++ E AL+LS+S+
Sbjct: 61  YLSNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKALLLSISS 120

Query: 121 TCHSTSSSSCLQQEKISQHLLV 136
              S       QQ   +Q LLV
Sbjct: 121 ARCSFQPQE--QQCSTTQQLLV 140

[Close]

BLAST of Spo11789.1 vs. TAIR (Arabidopsis)
Match: AT1G29510.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.9 bits (294), Expect = 5.100e-27
Identity = 67/142 (47.18%), Postives = 95/142 (66.90%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWPASKV-------ADKGHFIVYTIDGERFMIPLT 60
           MI++KKL++MA+KWQ+ AA  RKRIS+  S V        +KG F+VYT D  RF  P++
Sbjct: 2   MINAKKLMKMAKKWQQRAALHRKRISFQRSNVFTSSSSTVEKGCFVVYTADKIRFAFPIS 61

Query: 61  YLRSEIVTQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSN 120
           YL + IV +L  ++EEEFGL  + PITLP DS F+EY I ++QR+   + E AL++S+S 
Sbjct: 62  YLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKALLMSIS- 121

Query: 121 TCHSTSSSSCLQQEKISQHLLV 136
           +   +   S LQQE+ +Q LLV
Sbjct: 122 SAKCSLQCSLLQQEQSTQQLLV 142

[Close]

BLAST of Spo11789.1 vs. TAIR (Arabidopsis)
Match: AT1G29450.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 1.600e-25
Identity = 63/141 (44.68%), Postives = 92/141 (65.25%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWP------ASKVADKGHFIVYTIDGERFMIPLTY 60
           M+++KKL++MA+KWQ+ AA  RKRIS+       +S  A+KG F+VYT D  RF  PL+Y
Sbjct: 1   MMNTKKLIKMAKKWQQRAALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPLSY 60

Query: 61  LRSEIVTQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSNT 120
           L + +  +L  ++EEEFGL    PIT P DS F+EY I ++QR+   + E AL++S+S +
Sbjct: 61  LSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSIS-S 120

Query: 121 CHSTSSSSCLQQEKISQHLLV 136
              +S  S   QE+ +Q LLV
Sbjct: 121 ARCSSQCSLKLQERSTQQLLV 140

[Close]

BLAST of Spo11789.1 vs. TAIR (Arabidopsis)
Match: AT1G29430.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.5 bits (280), Expect = 2.100e-25
Identity = 65/142 (45.77%), Postives = 94/142 (66.20%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWPASKVA-------DKGHFIVYTIDGERFMIPLT 60
           MI++KKL+++A+KWQ+ AA  RKRIS+  S +        +KG F+VYT D  RF  PL+
Sbjct: 2   MINAKKLMKLAKKWQQRAALKRKRISFQRSSITTSSQTAVEKGCFVVYTADKIRFSFPLS 61

Query: 61  YLRSEIVTQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSN 120
           YL + IV +L  ++EEEFGL  + PITLP DS F+EY I+++QR+  ++ E AL+LS+S+
Sbjct: 62  YLSNTIVQELLKISEEEFGLPTEGPITLPFDSAFLEYLINLIQRRMDEDTEKALLLSISS 121

Query: 121 TCHSTSSSSCLQQEKISQHLLV 136
              + SS    Q    +Q LLV
Sbjct: 122 ---ARSSFQPQQHCSATQQLLV 140

[Close]

BLAST of Spo11789.1 vs. TAIR (Arabidopsis)
Match: AT1G29440.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 6.200e-25
Identity = 63/142 (44.37%), Postives = 92/142 (64.79%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISWPASKV-------ADKGHFIVYTIDGERFMIPLT 60
           MI++KKL++MA+KWQ+ AA  RKRIS+  S V        +KG F+VYT D  RF  P++
Sbjct: 1   MINAKKLMKMAKKWQQRAALHRKRISFQRSSVFTSSSSTVEKGCFVVYTADKIRFAFPIS 60

Query: 61  YLRSEIVTQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSN 120
           YL + +V +L  ++EE+FGL  + PITLP DS F+EY + ++QR+  ++ E AL+LS+S+
Sbjct: 61  YLSNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKALLLSISS 120

Query: 121 TCHSTSSSSCLQQEKISQHLLV 136
              S       QQ   +Q LLV
Sbjct: 121 ARCSFQPQE--QQCSTTQQLLV 140

[Close]

BLAST of Spo11789.1 vs. TAIR (Arabidopsis)
Match: AT1G29420.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.6 bits (270), Expect = 3.100e-24
Identity = 60/133 (45.11%), Postives = 89/133 (66.92%), Query Frame = 1


		  
Query: 1   MISSKKLVQMARKWQKLAAASRKRISW-------PASKVADKGHFIVYTIDGERFMIPLT 60
           M+++KKL++MA+KWQ+ AA  RKRIS+        +S  A+KG F+VYT D  RF  P++
Sbjct: 1   MMNTKKLLKMAKKWQQRAALRRKRISFHRSTDTTSSSTAAEKGCFVVYTSDRIRFAFPIS 60

Query: 61  YLRSEIVTQLFLMAEEEFGLTADRPITLPCDSTFMEYAISILQRQTTKEFENALILSMSN 120
           YL + ++ +L  ++EEEFG+  + PITLP DS F+EY I ++QR+   + E ALI S+S+
Sbjct: 61  YLSNSVIQELLKISEEEFGIPTEGPITLPFDSVFLEYLIRLVQRRMDGDTEKALITSISS 120

Query: 121 TCHSTSSSSCLQQ 127
           T  S   S  LQ+
Sbjct: 121 TRCSLPCSFQLQE 133

The following BLAST results are available for this feature:

BLAST of Spo11789.1 vs. NCBI nr
BLAST of Spo11789.1 vs. UniProtKB/TrEMBL
BLAST of Spo11789.1 vs. ExPASy Swiss-Prot
BLAST of Spo11789.1 vs. TAIR (Arabidopsis)

BLAST of Spo11789.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|870849034\|gb\|KMT01297.1\|	1.8e-50	75.3	hypothetical protein BVRB_9g21...	[more]
gi\|902203452\|gb\|KNA14562.1\|	9.3e-39	61.5	hypothetical protein SOVF_1064...	[more]
gi\|870849035\|gb\|KMT01298.1\|	1.6e-38	64.2	hypothetical protein BVRB_9g21...	[more]
gi\|731357566\|ref\|XP_010690279.1\|	3.3e-36	60.1	PREDICTED: uncharacterized pro...	[more]
gi\|902210322\|gb\|KNA16394.1\|	1.3e-35	57.9	hypothetical protein SOVF_0895...	[more]

BLAST of Spo11789.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8BJV3_BETVU	1.3e-50	75.3	Uncharacterized protein OS=Bet...	[more]
A0A0K9R709_SPIOL	6.5e-39	61.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8BMP2_BETVU	1.1e-38	64.2	Uncharacterized protein OS=Bet...	[more]
A0A0J8BMV1_BETVU	2.3e-36	60.1	Uncharacterized protein OS=Bet...	[more]
A0A0K9RBK5_SPIOL	8.8e-36	57.9	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo11789.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
SAU67_ARATH	9.0e-26	47.1	Auxin-responsive protein SAUR6...	[more]
SAU39_ORYSJ	1.7e-24	40.6	Auxin-responsive protein SAUR3...	[more]
SAU64_ARATH	2.9e-24	44.6	Auxin-responsive protein SAUR6...	[more]
SAU62_ARATH	3.8e-24	45.7	Auxin-responsive protein SAUR6...	[more]
SAU63_ARATH	1.1e-23	44.3	Auxin-responsive protein SAUR6...	[more]

BLAST of Spo11789.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G29510.1	5.1e-27	47.1	SAUR-like auxin-responsive pro...	[more]
AT1G29450.1	1.6e-25	44.6	SAUR-like auxin-responsive pro...	[more]
AT1G29430.1	2.1e-25	45.7	SAUR-like auxin-responsive pro...	[more]
AT1G29440.1	6.2e-25	44.3	SAUR-like auxin-responsive pro...	[more]
AT1G29420.1	3.1e-24	45.1	SAUR-like auxin-responsive pro...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 5..95 score: 4.1
None	No IPR available	PANTHER	PTHR31175	AUXIN-RESPONSIVE FAMILY PROTEIN	coord: 2..138 score: 4.3

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin