Spo11793.1 (mRNA) | SpinachBase

Overview


Name	Spo11793.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	SAUR-like auxin-responsive protein family, putative
Location	chr4 : 111743018 .. 111743425 (+)
Sequence length	408

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAGTACAAAGAAGCTTATCAAAATGGCAAGGAAATGGCAAAGAATAGCAGCTGCCAGCAGAAGAAGAGTTTCTTGGTCAAAATCATTGGCTGAGAAAGGTCACTTTGTTATTTACACGAGTGATAAAAGACGATTCATGATTCCTTTGACATACCTCAAAAGCGAAATTTTCACAGAGCTCTTTAGAATGGCTGAGGAAGAGTTTGGAGTAGAAAGTTCAGGGCCAATTACACTGCCTTGTGATTCGAGCTTCATGGAATACACAATCTCCGTGATCCAAAGACATGTCGCTAAGGACTTGGAGAAGGCACTGATCATGTCTTTAACCACCTGTAGATACTCATCATTTTCTAATGACCTTCAAGAACAACCCAATCAACAACCATTTATCTGCAGTTTTTAG

mRNA sequence

ATGATCAGTACAAAGAAGCTTATCAAAATGGCAAGGAAATGGCAAAGAATAGCAGCTGCCAGCAGAAGAAGAGTTTCTTGGTCAAAATCATTGGCTGAGAAAGGTCACTTTGTTATTTACACGAGTGATAAAAGACGATTCATGATTCCTTTGACATACCTCAAAAGCGAAATTTTCACAGAGCTCTTTAGAATGGCTGAGGAAGAGTTTGGAGTAGAAAGTTCAGGGCCAATTACACTGCCTTGTGATTCGAGCTTCATGGAATACACAATCTCCGTGATCCAAAGACATGTCGCTAAGGACTTGGAGAAGGCACTGATCATGTCTTTAACCACCTGTAGATACTCATCATTTTCTAATGACCTTCAAGAACAACCCAATCAACAACCATTTATCTGCAGTTTTTAG

Coding sequence (CDS)

ATGATCAGTACAAAGAAGCTTATCAAAATGGCAAGGAAATGGCAAAGAATAGCAGCTGCCAGCAGAAGAAGAGTTTCTTGGTCAAAATCATTGGCTGAGAAAGGTCACTTTGTTATTTACACGAGTGATAAAAGACGATTCATGATTCCTTTGACATACCTCAAAAGCGAAATTTTCACAGAGCTCTTTAGAATGGCTGAGGAAGAGTTTGGAGTAGAAAGTTCAGGGCCAATTACACTGCCTTGTGATTCGAGCTTCATGGAATACACAATCTCCGTGATCCAAAGACATGTCGCTAAGGACTTGGAGAAGGCACTGATCATGTCTTTAACCACCTGTAGATACTCATCATTTTCTAATGACCTTCAAGAACAACCCAATCAACAACCATTTATCTGCAGTTTTTAG

Protein sequence

MISTKKLIKMARKWQRIAAASRRRVSWSKSLAEKGHFVIYTSDKRRFMIPLTYLKSEIFTELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTTCRYSSFSNDLQEQPNQQPFICSF

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo11793	Spo11793	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo11793.1	Spo11793.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11793.1.exon.1	Spo11793.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11793.1.CDS.1	Spo11793.1.CDS.1	CDS

Homology

[Close]

BLAST of Spo11793.1 vs. NCBI nr
Match: gi|902203451|gb|KNA14561.1| (hypothetical protein SOVF_106450 [Spinacia oleracea])

HSP 1 Score: 226.1 bits (575), Expect = 3.700e-56
Identity = 109/126 (86.51%), Postives = 118/126 (93.65%), Query Frame = 1


		  
Query: 10  MARKWQRIAAASRRRVSWSKSLAEKGHFVIYTSDKRRFMIPLTYLKSEIFTELFRMAEEE 69
           MARKWQR+AAASRRR+SWS+S+A+KGHFV+YTSDKRRFMIPL YLKSEIFTELFRMAEEE
Sbjct: 1   MARKWQRLAAASRRRISWSRSVADKGHFVVYTSDKRRFMIPLIYLKSEIFTELFRMAEEE 60

Query: 70  FGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTTCRYSSFSNDLQEQPNQQ 129
           FGVESSGPI LPCDSSFMEY IS+IQRHV +D+EKALIMSL TCRYSS SN LQEQPNQQ
Sbjct: 61  FGVESSGPIMLPCDSSFMEYVISMIQRHVTEDMEKALIMSLATCRYSSLSNGLQEQPNQQ 120

Query: 130 PFICSF 136
            FICSF
Sbjct: 121 LFICSF 126

[Close]

BLAST of Spo11793.1 vs. NCBI nr
Match: gi|902210321|gb|KNA16393.1| (hypothetical protein SOVF_089560 [Spinacia oleracea])

HSP 1 Score: 223.4 bits (568), Expect = 2.400e-55
Identity = 110/135 (81.48%), Postives = 120/135 (88.89%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSWSKSLAEKGHFVIYTSDKRRFMIPLTYLKSEIFT 60
           MISTKKLIKMARKWQR+AAASRRR+ WSK +AEKGHFV+YTSDKRRFMIPL YL SEIF 
Sbjct: 1   MISTKKLIKMARKWQRLAAASRRRIYWSKPVAEKGHFVVYTSDKRRFMIPLAYLNSEIFR 60

Query: 61  ELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTTCRYSSFSN 120
           ELFR+AEEE+GV SSGPI LPCDS+FMEYTIS+IQRHV K+LEKALI SL  CRYSS SN
Sbjct: 61  ELFRIAEEEYGVSSSGPIMLPCDSNFMEYTISMIQRHVTKELEKALITSLANCRYSSLSN 120

Query: 121 DLQEQPNQQPFICSF 136
           D QEQ +QQ FICSF
Sbjct: 121 DYQEQTSQQLFICSF 135

[Close]

BLAST of Spo11793.1 vs. NCBI nr
Match: gi|870849031|gb|KMT01294.1| (hypothetical protein BVRB_9g213100 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 208.4 bits (529), Expect = 7.900e-51
Identity = 101/135 (74.81%), Postives = 117/135 (86.67%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSWSKSLAEKGHFVIYTSDKRRFMIPLTYLKSEIFT 60
           MISTKKLIKMARKWQ+IAAASR+R+SW + LA +GHFV+YT+DKRRFMIPL YLK+EIF 
Sbjct: 1   MISTKKLIKMARKWQKIAAASRKRISWPRPLANEGHFVVYTTDKRRFMIPLKYLKTEIFI 60

Query: 61  ELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTTCRYSSFSN 120
           ELFR+A+EE+GV S+GPITLPCDS FMEY IS+IQRHV +DLEKALIMSL TC+YSS S 
Sbjct: 61  ELFRIADEEYGVASAGPITLPCDSDFMEYMISMIQRHVTQDLEKALIMSLATCKYSSLSL 120

Query: 121 DLQEQPNQQPFICSF 136
           D QEQ N    +CSF
Sbjct: 121 DNQEQFNPHSLVCSF 135

[Close]

BLAST of Spo11793.1 vs. NCBI nr
Match: gi|902203446|gb|KNA14556.1| (hypothetical protein SOVF_106400 [Spinacia oleracea])

HSP 1 Score: 207.2 bits (526), Expect = 1.800e-50
Identity = 104/136 (76.47%), Postives = 120/136 (88.24%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSWSKSLAEKGHFVIYTSDKRRFMIPLTYLKSEIFT 60
           MISTKKLIKMARKWQ+IAAASR+R+SWS+ +A+KGHFV+YTSD+RRFMIPL YL+SEIF 
Sbjct: 1   MISTKKLIKMARKWQKIAAASRKRISWSRPVADKGHFVVYTSDERRFMIPLGYLESEIFR 60

Query: 61  ELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTTCRYSS-FS 120
           ELFR+AEEEFGV SSG I LPCDS FMEY IS+IQRHVA+DLEKALIMSL  C+YSS   
Sbjct: 61  ELFRIAEEEFGVASSGRIMLPCDSDFMEYAISMIQRHVAEDLEKALIMSLANCKYSSLLL 120

Query: 121 NDLQEQPNQQPFICSF 136
           ++ Q+Q NQQ FICSF
Sbjct: 121 HEHQDQTNQQLFICSF 136

[Close]

BLAST of Spo11793.1 vs. NCBI nr
Match: gi|902203449|gb|KNA14559.1| (hypothetical protein SOVF_106430 [Spinacia oleracea])

HSP 1 Score: 206.5 bits (524), Expect = 3.000e-50
Identity = 101/135 (74.81%), Postives = 116/135 (85.93%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSWSKSLAEKGHFVIYTSDKRRFMIPLTYLKSEIFT 60
           MISTKKLIKMA+KWQR+A ASRRR+SWS+S+A+KGHFV+YTSDK RFMIPL YL SEIF 
Sbjct: 1   MISTKKLIKMAKKWQRLAVASRRRISWSRSVADKGHFVVYTSDKTRFMIPLAYLDSEIFR 60

Query: 61  ELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTTCRYSSFSN 120
           ELFR+AEEEFGV   GPI LPCDS+FMEY IS+IQRHV +DLEKALIMSL  CRYSS  +
Sbjct: 61  ELFRIAEEEFGVSRLGPIMLPCDSNFMEYAISMIQRHVDEDLEKALIMSLANCRYSSLLH 120

Query: 121 DLQEQPNQQPFICSF 136
           + Q+Q +QQ  ICSF
Sbjct: 121 ENQQQTSQQLLICSF 135

[Close]

BLAST of Spo11793.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4Y5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_106450 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.600e-56
Identity = 109/126 (86.51%), Postives = 118/126 (93.65%), Query Frame = 1


		  
Query: 10  MARKWQRIAAASRRRVSWSKSLAEKGHFVIYTSDKRRFMIPLTYLKSEIFTELFRMAEEE 69
           MARKWQR+AAASRRR+SWS+S+A+KGHFV+YTSDKRRFMIPL YLKSEIFTELFRMAEEE
Sbjct: 1   MARKWQRLAAASRRRISWSRSVADKGHFVVYTSDKRRFMIPLIYLKSEIFTELFRMAEEE 60

Query: 70  FGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTTCRYSSFSNDLQEQPNQQ 129
           FGVESSGPI LPCDSSFMEY IS+IQRHV +D+EKALIMSL TCRYSS SN LQEQPNQQ
Sbjct: 61  FGVESSGPIMLPCDSSFMEYVISMIQRHVTEDMEKALIMSLATCRYSSLSNGLQEQPNQQ 120

Query: 130 PFICSF 136
            FICSF
Sbjct: 121 LFICSF 126

[Close]

BLAST of Spo11793.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RA48_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_089560 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.700e-55
Identity = 110/135 (81.48%), Postives = 120/135 (88.89%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSWSKSLAEKGHFVIYTSDKRRFMIPLTYLKSEIFT 60
           MISTKKLIKMARKWQR+AAASRRR+ WSK +AEKGHFV+YTSDKRRFMIPL YL SEIF 
Sbjct: 1   MISTKKLIKMARKWQRLAAASRRRIYWSKPVAEKGHFVVYTSDKRRFMIPLAYLNSEIFR 60

Query: 61  ELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTTCRYSSFSN 120
           ELFR+AEEE+GV SSGPI LPCDS+FMEYTIS+IQRHV K+LEKALI SL  CRYSS SN
Sbjct: 61  ELFRIAEEEYGVSSSGPIMLPCDSNFMEYTISMIQRHVTKELEKALITSLANCRYSSLSN 120

Query: 121 DLQEQPNQQPFICSF 136
           D QEQ +QQ FICSF
Sbjct: 121 DYQEQTSQQLFICSF 135

[Close]

BLAST of Spo11793.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BMV6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g213100 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.500e-51
Identity = 101/135 (74.81%), Postives = 117/135 (86.67%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSWSKSLAEKGHFVIYTSDKRRFMIPLTYLKSEIFT 60
           MISTKKLIKMARKWQ+IAAASR+R+SW + LA +GHFV+YT+DKRRFMIPL YLK+EIF 
Sbjct: 1   MISTKKLIKMARKWQKIAAASRKRISWPRPLANEGHFVVYTTDKRRFMIPLKYLKTEIFI 60

Query: 61  ELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTTCRYSSFSN 120
           ELFR+A+EE+GV S+GPITLPCDS FMEY IS+IQRHV +DLEKALIMSL TC+YSS S 
Sbjct: 61  ELFRIADEEYGVASAGPITLPCDSDFMEYMISMIQRHVTQDLEKALIMSLATCKYSSLSL 120

Query: 121 DLQEQPNQQPFICSF 136
           D QEQ N    +CSF
Sbjct: 121 DNQEQFNPHSLVCSF 135

[Close]

BLAST of Spo11793.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4Y2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_106400 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.200e-50
Identity = 104/136 (76.47%), Postives = 120/136 (88.24%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSWSKSLAEKGHFVIYTSDKRRFMIPLTYLKSEIFT 60
           MISTKKLIKMARKWQ+IAAASR+R+SWS+ +A+KGHFV+YTSD+RRFMIPL YL+SEIF 
Sbjct: 1   MISTKKLIKMARKWQKIAAASRKRISWSRPVADKGHFVVYTSDERRFMIPLGYLESEIFR 60

Query: 61  ELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTTCRYSS-FS 120
           ELFR+AEEEFGV SSG I LPCDS FMEY IS+IQRHVA+DLEKALIMSL  C+YSS   
Sbjct: 61  ELFRIAEEEFGVASSGRIMLPCDSDFMEYAISMIQRHVAEDLEKALIMSLANCKYSSLLL 120

Query: 121 NDLQEQPNQQPFICSF 136
           ++ Q+Q NQQ FICSF
Sbjct: 121 HEHQDQTNQQLFICSF 136

[Close]

BLAST of Spo11793.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6H1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_106430 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.100e-50
Identity = 101/135 (74.81%), Postives = 116/135 (85.93%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSWSKSLAEKGHFVIYTSDKRRFMIPLTYLKSEIFT 60
           MISTKKLIKMA+KWQR+A ASRRR+SWS+S+A+KGHFV+YTSDK RFMIPL YL SEIF 
Sbjct: 1   MISTKKLIKMAKKWQRLAVASRRRISWSRSVADKGHFVVYTSDKTRFMIPLAYLDSEIFR 60

Query: 61  ELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTTCRYSSFSN 120
           ELFR+AEEEFGV   GPI LPCDS+FMEY IS+IQRHV +DLEKALIMSL  CRYSS  +
Sbjct: 61  ELFRIAEEEFGVSRLGPIMLPCDSNFMEYAISMIQRHVDEDLEKALIMSLANCRYSSLLH 120

Query: 121 DLQEQPNQQPFICSF 136
           + Q+Q +QQ  ICSF
Sbjct: 121 ENQQQTSQQLLICSF 135

[Close]

BLAST of Spo11793.1 vs. ExPASy Swiss-Prot
Match: SAU64_ARATH (Auxin-responsive protein SAUR64 OS=Arabidopsis thaliana GN=SAUR64 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.700e-30
Identity = 70/137 (51.09%), Postives = 97/137 (70.80%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSWSKS-------LAEKGHFVIYTSDKRRFMIPLTY 60
           M++TKKLIKMA+KWQ+ AA  R+R+S+ +S        AEKG FV+YT+D  RF  PL+Y
Sbjct: 1   MMNTKKLIKMAKKWQQRAALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPLSY 60

Query: 61  LKSEIFTELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTTC 120
           L + +F EL +++EEEFG+ + GPIT P DS F+EY I ++QR +  D EKAL+MS+++ 
Sbjct: 61  LSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSISSA 120

Query: 121 RYSS-FSNDLQEQPNQQ 130
           R SS  S  LQE+  QQ
Sbjct: 121 RCSSQCSLKLQERSTQQ 137

[Close]

BLAST of Spo11793.1 vs. ExPASy Swiss-Prot
Match: SAU67_ARATH (Auxin-responsive protein SAUR67 OS=Arabidopsis thaliana GN=SAUR67 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.200e-28
Identity = 66/140 (47.14%), Postives = 96/140 (68.57%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSW--------SKSLAEKGHFVIYTSDKRRFMIPLT 60
           MI+ KKL+KMA+KWQ+ AA  R+R+S+        S S  EKG FV+YT+DK RF  P++
Sbjct: 2   MINAKKLMKMAKKWQQRAALHRKRISFQRSNVFTSSSSTVEKGCFVVYTADKIRFAFPIS 61

Query: 61  YLKSEIFTELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTT 120
           YL + I  EL +++EEEFG+ + GPITLP DS F+EY I +IQR +  D EKAL+MS+++
Sbjct: 62  YLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKALLMSISS 121

Query: 121 CRYSSFSNDLQEQPNQQPFI 133
            + S   + LQ++ + Q  +
Sbjct: 122 AKCSLQCSLLQQEQSTQQLL 141

[Close]

BLAST of Spo11793.1 vs. ExPASy Swiss-Prot
Match: SAU65_ARATH (Auxin-responsive protein SAUR65 OS=Arabidopsis thaliana GN=SAUR65 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.200e-28
Identity = 67/144 (46.53%), Postives = 92/144 (63.89%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSWSKSLA---------------EKGHFVIYTSDKR 60
           MI+TKKL+KMA+KWQ+ AA  R+R+S+ +S                 EKG FV+YT DK 
Sbjct: 1   MINTKKLLKMAKKWQQRAALKRKRISFQRSTTTTTTTTTTTSSSTAVEKGCFVVYTVDKI 60

Query: 61  RFMIPLTYLKSEIFTELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKA 120
           RF  PL+YL + +F EL +++EEEFG+ + GPITLP DS F+EY I  I+R +  D EKA
Sbjct: 61  RFAFPLSYLNNSVFEELLKISEEEFGLRAGGPITLPFDSVFLEYLIKFIERRMDGDTEKA 120

Query: 121 LIMSLTTCRYSSFSNDLQEQPNQQ 130
           L+MS+++ R S    + Q    QQ
Sbjct: 121 LLMSISSARCSMQPQEQQSGYTQQ 144

[Close]

BLAST of Spo11793.1 vs. ExPASy Swiss-Prot
Match: SAU63_ARATH (Auxin-responsive protein SAUR63 OS=Arabidopsis thaliana GN=SAUR63 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.200e-27
Identity = 63/137 (45.99%), Postives = 94/137 (68.61%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSW--------SKSLAEKGHFVIYTSDKRRFMIPLT 60
           MI+ KKL+KMA+KWQ+ AA  R+R+S+        S S  EKG FV+YT+DK RF  P++
Sbjct: 1   MINAKKLMKMAKKWQQRAALHRKRISFQRSSVFTSSSSTVEKGCFVVYTADKIRFAFPIS 60

Query: 61  YLKSEIFTELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTT 120
           YL + +  EL +++EE+FG+ + GPITLP DS+F+EY + +IQR + +D EKAL++S+++
Sbjct: 61  YLSNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKALLLSISS 120

Query: 121 CRYSSFSNDLQEQPNQQ 130
            R S    + Q    QQ
Sbjct: 121 ARCSFQPQEQQCSTTQQ 137

[Close]

BLAST of Spo11793.1 vs. ExPASy Swiss-Prot
Match: SAU66_ARATH (Auxin-responsive protein SAUR66 OS=Arabidopsis thaliana GN=SAUR66 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.200e-27
Identity = 65/134 (48.51%), Postives = 92/134 (68.66%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSWSK-----SLAEKGHFVIYTSDKRRFMIPLTYLK 60
           M++TKKLIKM RKWQ+ AA  R+R+S+ +     +  EKG FV+YT+D  RF  P++YL 
Sbjct: 1   MMNTKKLIKMFRKWQQRAALHRKRISFQRPSTRSTTVEKGCFVVYTADNTRFAFPISYLS 60

Query: 61  SEIFTELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTTCRY 120
           + +F E+  ++EEEFG+ + GPITLP DS F+EY I +I+R +  D EKAL+MS+++ R 
Sbjct: 61  NSVFQEILEISEEEFGLPTGGPITLPFDSVFLEYLIKLIKRRMDGDTEKALLMSISSARC 120

Query: 121 SSFSNDLQEQPNQQ 130
           S      QEQ  QQ
Sbjct: 121 SL---QKQEQSTQQ 131

[Close]

BLAST of Spo11793.1 vs. TAIR (Arabidopsis)
Match: AT1G29450.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 131.3 bits (329), Expect = 4.400e-31
Identity = 70/137 (51.09%), Postives = 97/137 (70.80%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSWSKS-------LAEKGHFVIYTSDKRRFMIPLTY 60
           M++TKKLIKMA+KWQ+ AA  R+R+S+ +S        AEKG FV+YT+D  RF  PL+Y
Sbjct: 1   MMNTKKLIKMAKKWQQRAALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPLSY 60

Query: 61  LKSEIFTELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTTC 120
           L + +F EL +++EEEFG+ + GPIT P DS F+EY I ++QR +  D EKAL+MS+++ 
Sbjct: 61  LSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSISSA 120

Query: 121 RYSS-FSNDLQEQPNQQ 130
           R SS  S  LQE+  QQ
Sbjct: 121 RCSSQCSLKLQERSTQQ 137

[Close]

BLAST of Spo11793.1 vs. TAIR (Arabidopsis)
Match: AT1G29510.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 125.9 bits (315), Expect = 1.800e-29
Identity = 66/140 (47.14%), Postives = 96/140 (68.57%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSW--------SKSLAEKGHFVIYTSDKRRFMIPLT 60
           MI+ KKL+KMA+KWQ+ AA  R+R+S+        S S  EKG FV+YT+DK RF  P++
Sbjct: 2   MINAKKLMKMAKKWQQRAALHRKRISFQRSNVFTSSSSTVEKGCFVVYTADKIRFAFPIS 61

Query: 61  YLKSEIFTELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTT 120
           YL + I  EL +++EEEFG+ + GPITLP DS F+EY I +IQR +  D EKAL+MS+++
Sbjct: 62  YLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKALLMSISS 121

Query: 121 CRYSSFSNDLQEQPNQQPFI 133
            + S   + LQ++ + Q  +
Sbjct: 122 AKCSLQCSLLQQEQSTQQLL 141

[Close]

BLAST of Spo11793.1 vs. TAIR (Arabidopsis)
Match: AT1G29460.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 124.8 bits (312), Expect = 4.100e-29
Identity = 67/144 (46.53%), Postives = 92/144 (63.89%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSWSKSLA---------------EKGHFVIYTSDKR 60
           MI+TKKL+KMA+KWQ+ AA  R+R+S+ +S                 EKG FV+YT DK 
Sbjct: 1   MINTKKLLKMAKKWQQRAALKRKRISFQRSTTTTTTTTTTTSSSTAVEKGCFVVYTVDKI 60

Query: 61  RFMIPLTYLKSEIFTELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKA 120
           RF  PL+YL + +F EL +++EEEFG+ + GPITLP DS F+EY I  I+R +  D EKA
Sbjct: 61  RFAFPLSYLNNSVFEELLKISEEEFGLRAGGPITLPFDSVFLEYLIKFIERRMDGDTEKA 120

Query: 121 LIMSLTTCRYSSFSNDLQEQPNQQ 130
           L+MS+++ R S    + Q    QQ
Sbjct: 121 LLMSISSARCSMQPQEQQSGYTQQ 144

[Close]

BLAST of Spo11793.1 vs. TAIR (Arabidopsis)
Match: AT1G29440.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 124.0 bits (310), Expect = 7.000e-29
Identity = 63/137 (45.99%), Postives = 94/137 (68.61%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSW--------SKSLAEKGHFVIYTSDKRRFMIPLT 60
           MI+ KKL+KMA+KWQ+ AA  R+R+S+        S S  EKG FV+YT+DK RF  P++
Sbjct: 1   MINAKKLMKMAKKWQQRAALHRKRISFQRSSVFTSSSSTVEKGCFVVYTADKIRFAFPIS 60

Query: 61  YLKSEIFTELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTT 120
           YL + +  EL +++EE+FG+ + GPITLP DS+F+EY + +IQR + +D EKAL++S+++
Sbjct: 61  YLSNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKALLLSISS 120

Query: 121 CRYSSFSNDLQEQPNQQ 130
            R S    + Q    QQ
Sbjct: 121 ARCSFQPQEQQCSTTQQ 137

[Close]

BLAST of Spo11793.1 vs. TAIR (Arabidopsis)
Match: AT1G29500.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 124.0 bits (310), Expect = 7.000e-29
Identity = 65/134 (48.51%), Postives = 92/134 (68.66%), Query Frame = 1


		  
Query: 1   MISTKKLIKMARKWQRIAAASRRRVSWSK-----SLAEKGHFVIYTSDKRRFMIPLTYLK 60
           M++TKKLIKM RKWQ+ AA  R+R+S+ +     +  EKG FV+YT+D  RF  P++YL 
Sbjct: 1   MMNTKKLIKMFRKWQQRAALHRKRISFQRPSTRSTTVEKGCFVVYTADNTRFAFPISYLS 60

Query: 61  SEIFTELFRMAEEEFGVESSGPITLPCDSSFMEYTISVIQRHVAKDLEKALIMSLTTCRY 120
           + +F E+  ++EEEFG+ + GPITLP DS F+EY I +I+R +  D EKAL+MS+++ R 
Sbjct: 61  NSVFQEILEISEEEFGLPTGGPITLPFDSVFLEYLIKLIKRRMDGDTEKALLMSISSARC 120

Query: 121 SSFSNDLQEQPNQQ 130
           S      QEQ  QQ
Sbjct: 121 SL---QKQEQSTQQ 131

The following BLAST results are available for this feature:

BLAST of Spo11793.1 vs. NCBI nr
BLAST of Spo11793.1 vs. UniProtKB/TrEMBL
BLAST of Spo11793.1 vs. ExPASy Swiss-Prot
BLAST of Spo11793.1 vs. TAIR (Arabidopsis)

BLAST of Spo11793.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902203451\|gb\|KNA14561.1\|	3.7e-56	86.5	hypothetical protein SOVF_1064...	[more]
gi\|902210321\|gb\|KNA16393.1\|	2.4e-55	81.4	hypothetical protein SOVF_0895...	[more]
gi\|870849031\|gb\|KMT01294.1\|	7.9e-51	74.8	hypothetical protein BVRB_9g21...	[more]
gi\|902203446\|gb\|KNA14556.1\|	1.8e-50	76.4	hypothetical protein SOVF_1064...	[more]
gi\|902203449\|gb\|KNA14559.1\|	3.0e-50	74.8	hypothetical protein SOVF_1064...	[more]

BLAST of Spo11793.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R4Y5_SPIOL	2.6e-56	86.5	Uncharacterized protein OS=Spi...	[more]
A0A0K9RA48_SPIOL	1.7e-55	81.4	Uncharacterized protein OS=Spi...	[more]
A0A0J8BMV6_BETVU	5.5e-51	74.8	Uncharacterized protein OS=Bet...	[more]
A0A0K9R4Y2_SPIOL	1.2e-50	76.4	Uncharacterized protein OS=Spi...	[more]
A0A0K9R6H1_SPIOL	2.1e-50	74.8	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo11793.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
SAU64_ARATH	7.7e-30	51.0	Auxin-responsive protein SAUR6...	[more]
SAU67_ARATH	3.2e-28	47.1	Auxin-responsive protein SAUR6...	[more]
SAU65_ARATH	7.2e-28	46.5	Auxin-responsive protein SAUR6...	[more]
SAU63_ARATH	1.2e-27	45.9	Auxin-responsive protein SAUR6...	[more]
SAU66_ARATH	1.2e-27	48.5	Auxin-responsive protein SAUR6...	[more]

BLAST of Spo11793.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G29450.1	4.4e-31	51.0	SAUR-like auxin-responsive pro...	[more]
AT1G29510.1	1.8e-29	47.1	SAUR-like auxin-responsive pro...	[more]
AT1G29460.1	4.1e-29	46.5	SAUR-like auxin-responsive pro...	[more]
AT1G29440.1	7.0e-29	45.9	SAUR-like auxin-responsive pro...	[more]
AT1G29500.1	7.0e-29	48.5	SAUR-like auxin-responsive pro...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 5..93 score: 5.5
None	No IPR available	PANTHER	PTHR31175	AUXIN-RESPONSIVE FAMILY PROTEIN	coord: 2..135 score: 4.8
None	No IPR available	PANTHER	PTHR31175:SF13	SUBFAMILY NOT NAMED	coord: 2..135 score: 4.8

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin