Spo11874.1 (mRNA) | SpinachBase

Overview


Name	Spo11874.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	DNA-directed RNA polymerase subunit beta (2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta)
Location	SpoScf_02809 : 4440 .. 27129 (-)
Sequence length	1395

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTACACTTGATGATATGAATCATTTGAAACATAAACGTATTAGGTCTGTCACAGATCTCTTACAAGATCAATTCGGATTGGCTCTAGTTCGTTTAGAAAACGTGGTTCGAGGAACTATAAGTGGAGCAATTCGTCATAAATTAATACCGACTCCTCAGAATTTGGTAACTTCAACTCCATTAACGACTTTTGAATCTTTTTTTGGATTACACCCATTATCTCAAGTTTTGGATCGAACTAATCCATTGACACAAATAGTTCATGGGAGAAAATTGAGTTATTTGGGTCCTGGGGGATTGACAGGGCGAACCGCTAGTTTTCGGATACGATATATCCATCCTAGTCACTACGGGCGTATTTGCCCAATTGACACATCTGAAGGAATCAATGTTGGGCTTATTGGGTCCTTAGCAATTCATGCGAGTATTGGTCCTTGGGGGTCTCTAGAAAGCCCTTATTATGAAATTTCTGAGAGATCAAAAAGGGTACAGATGCTTTATTTATCACCAAGTAGGGATGAATACTATATGTTAGCGTCCGGAAATTCTTTGGCCCTGAATCAAGGTATTCAGGAAGAACAGGTTGTTCCAGCTCGATATCGTCAAGAATTCTTGACTATTGCGTGGGAACAGGTTCATTTTCGAAGTATCTTTACCTTCCAATATTTTTCTATTGGAGCTTCTCTCATTCCTTTTATCGAGCACAATGATGCAAATCGAGCTTTAATGAGTTCTAATATGCAACGTCAAGCAGTTCCGCTTTCTCAGTCCGAGAAGTGCATTGTTGGAACGGGGTTGGAACGCCAAGTGGCCCTAGATTCGGGGGTTCTCACTATAGCCGAACATGAGGGAAAGATCATTTATACCAACACTAACAAGATTGTTTTATTAGGGAATGGGAATACTGTAAGCATTCCATTAGTTATGTATCAATGTTCCAACAAAAATACTTGTATGCATCAAAAACCTCAGATTCCGCGGGGGAAATGTGTTAAAAAGGGGCAAATTTTAGCAAATGGTGCCGCTACAGTTGGTGGTGAGCTAGCTTTGGGAAAAAACGTATTAGTAGCTTATATGCCGTGGGAAGGTTACAATTTTGAAGATGCGGTACTCATTAGTGAGCGTCTTGTGTATGAAGATATTTATACTTCTTTTCACATACGGAAATATGAAATTCAAACTTATGTGACAAGTCAAGGTCCTGAAAAGGTCACTAGCGAAATACCACATTTAGAAGCTCATTTACTCCGCAATTTAGACAAAAATGGAATTGTGAGGTTGGGATCATGGGTAGAAACAGGTGATATTTTGGTAGGAAATTAACGCCTCAGATGGCAAAAGAATCTTCGTATGCCCCCGAACATAGATTATTACGAGCTATACTTGGCATTCAGGTATCCACATCAAAGGAAACTTGTCTAAAACTACCTATAGGTGGTAGGGGCCGAGTTATTGATGTGCGATGGATCCAGAAAAAGGGGGGTTTCAGTTATAATCCAGAAACGATTCATGTATAAATTTCACAAAAACGTGAAATCAAAGTAGGCGATAAAGTAGCTGGAAGACATGGAAATAAGGGTATCATTTCCAGAATTTTGCTTAGACAAGATATGCCATATTTGCAAGATGGAAGACCTGTTGATATGATCTTTAACCCACTAGGAGTACCTTCACGAATGAATGTAGGACAAATATTTGAATGCTCGCTTGGGTTAGCGGGGAGTCTGGTGTTTCATAGGGGATTTTCCAGTTTTCGCACATGTTATTATGTTTAACTGTATTCCCCTACAGTGGTATCACGAATCTTATGTATTCAAAGCGTGTTTTAGCATGATTTAATTTTTTTGCTGTTGTCGAATTTTCGGGAATTTTTGTTGATTTTTCGGAATTTTTTATGAATTATTGGATTAATTGCGTAACTTGTTATGAAATAAAAAAGATTCGGTTTTTTGACTTTTCTGACCCTAATCTCATTGAAAACGATTTTCTAAGATCAACCCATGGGAACGGAATTGCAAAAACAGGCCTAGTGATGTTTTTTGGGCGTTTTTGTTAATTTTCGAATTAAAATTAAAAGTGTCGGAAAGTATTTCAATTAAAAGGTCGACCTAAACAACTCGGAATTAATTGAAATTTTGACACGATGTGGCTGGGTACATTCTTGATCTATGGTGAAAACCATAATTTTGACACGATGTGGCTGGGTACATTCCGATAAGTATAAACCATAATTTTGCTTTCCTCAAATTCGTAAAATTTAGATCCTTAATTGATTTTTTAAATAATTTAGATCTAATAATTCAGTTAATTGGGGAAGGGAATAAAATTTCAAGGATCAGTGGCTAATTTTAAAAATTATTGGATTAAAATTTTGAATGGTTTCGTTAATTTTAATCGCACTTAAACCAAATTATTAAAATCTGAAATTTAAATGTTTAAGAACGATTTAAAGTTTTAGATTTTATTATTTAAAAGTTCAAATTTTTAGTTGAAATAGCTCGTTCTTAAAATTTGAATAATGTTAGCCTTGATTTAATATTTTACGAAATTGGATTGTCGTTAAATTAATTAAATCGTAAAAACCGTTGTTTTTCGAAAATAAAAATCGTAACTTTTTATGAAAAATAACATAAATGCAAACGTTCGTGAAATTAATTTTTTTTTTAAATTAAGTTGGTCCGTAGTATGAACCAAAGGCACGAACACAAGGTTGAGATGGACGTGTGGCTCGTCGAGCCACGCGGGCTGCCGCATCGGTGCCGAGCCGCAGCGACGCGGGGAACAGCATGGGCGCTGCGTGCCGCGCGCTCTGGGCGAGGAAAGGGGCAAGCAGGCAGAGCCTTCCTTGCGATTGCTGCGAGAAAGCAAGGCACCTGGCCTTGCGATGCGCAGCGACGAGCGTCGAGCCAGGCACGCAGGGGCAACAGCAGCTGCGGGTACGTGTGCAAGGCTGCGGGGTGCGCGGGCTTTGCTCGTGTGCCTCGTAGGCCACACAGTGCTACGTTGGGCTGGGCGCAAGCCTAGCCCGAGCAAGCACATGAAATTTTTTTAAAAAAATTTGTTTATTTCGTTGGGCTTGACCATGTTTGCATTAATTTGGGCTAAGGATATTTAATTTAATATTTTATTAACTTGGGCTAGGCCGCGAGTTTTAATTTAATATTTAATAATTAATTATCCGGAATAATTATTGGTTTGAGTGGGAGCCACTAAATGAAATTAAAATGAAATAATTATTTTTAATTATTTTCGTAGGTCGCATTATTTTAATTAAATTCAATTTTAATTAGAATAAAGTCTAAGGATTAATAATTTGGAAATTGATTAATCTTTTATTACGCGTTTATGTGAACGTGAATTTTAATTAATTCACGTAAATACTTTCATTATTATCATGGGCCATTCGTTTTAGCATATGAATGGATGAATGCATAGAATATATATTTTATGTAATGCAGGTACTCCAAGTGACTAGTATGGCCATTTAGGATAGTTAAATACGGTCTGCGAACCGTTCTATCTTTGAATGTAAAGTTTTAAATATGGTCTGCGTACCATGGAAATTTTGATGTATTTTATTATTTTCAAGTATTTCTAAGTTTAGAACTTTAAGTTAGCAATTGAACGAAAATTCAAGACGATGCCAAGCTAACAAGATGGTGATGAAGATTGGATGCTTCAAGACAAGATGTTTTGGGCCAAACTAGTTCACCATTTTATTTATGCATTTGATATATATATATATATATATATATATATATATATATATATGCTTGAATGTATGTATGTATACTTTGCATGGATAGGTTGTTTCGTATGACTCGATTAGATTAAGTTCACTAAATAATCGAACCAACATAGAAACAACTAGGTCCAAAGCAATATTGAGTTTAAAAATTTCCTTCCAACTCAAGCACATACAAAAATCTAAGGACCTAATGTAGTAGGTTTACGCCAAAGCGTGGTGCTATATTAGTTGACATAGATGGTAAGGCGTCCCAAAGGAGCACGTTGATTGTGGTTTCAACTCAAGCAACAATGGCATTATGTTATGGCAATGGGATAAATTATGGTATTAATTTATTAACCAAGAGTAATTTGGAGATTACTAGCAACAGGTTTTGCTTACGTAGAATCTTAAACTACTTAAGACATGCCAAAGCTGCCTAAGGATTTAGGACTTTTAGGGTCTTGGAATCGTTTCATTCATTTTGGACCATGTTTTTGCTTTTGCATGAATGAAATGTTTAATAGCTTTGATGATTGCATGAATTCTTTTATTTCAAGTTATTAAAGTATGATAAATGTTTTCTTTGCTAGTTCATTTTGTAGAATCGTAAATCTTCAACTTTGTTGCGTTCGGACAATAGAACTGCGATATTTCCTTGATGGATTGATAACTAATTTTGAGAGCGATTCTCAAAGAAAAGGAGAATAAGAGCGTATCTTGAATGCTATTTTCTTATAATGATCTTCATGGTTGTTTTCAAACTAAAATTTGAATGGTAGACCAATTGGACCTCATATATTCAGAATACTGGGTAGTTTTGGAATAATGAAGTATTGAGTTAAAGACTCATGTATAACCAATGGTTAACAACCAATTTTCTTTTGATTCGATAAATGAACTAGACTCATTGGATGTTTTCATTAAAAGTGAATAATAGAAAGGGACTTTGTAAGCATAACAAAGTAAGAAGATCAAGCAAAGAGTAAAATCTTTTGGAGTATAAGAAAACGTGCTAGAAAGGATAGGAAAGGGGAACAAAATAAATGAATTTAGATATTCTATTTCTACCTTGAGGTTTATGTTAAAGAGGAACGACTTAGCAAATAAACTCCCATGGTATTAGATTACCGCTTGAGGTTCTAACTCTTGTTAAGAACTCAAATTCCGGGAGCTAAGTCTGGTTATTGACCTACAAGTGGAAATGAAGCAAAGTTGTGCTACATTAATTGCAGGGTCATCGTGTTTGTTTTAAAGTCCTTCTAAAGGCTGGAACTTAATGGTATTATGTTCCATTAATCATCATAATAGATTTCTGCCTGGACAACGGAAGGACTCACATTCAAATTAAACAAAAACATTCGTTGAGTGTTTATTTGAATGACATGGTCATTTAAGGGTTGAGTCTTATGATTGATTGATAAACAAACGAATCTCTTCACAATCAAACTTCAGAAGGTTCAAATCAAACACTTGGATTTGTGTTCCACATATCTTTGGCAATGTCATACGACCATATCAACAAGACAACATTCCAAGATTCCATGGCATGGATTTTTGAAAGTTGGTTAATTTAAAACACGTGGGTCTTGCTTGTTGAACGTGACATAGAAATGGACTATTGTTAGAAGTTTCTATACAATAAAGTTCATGGGCCAAAGATGGATTTTATGACTTACCTATTTCACAAGAATTTGAGAAAATATGGCTATATTTACTAAACGTGAAATATGTGAAATACTTCAATGCGATTCACAAAAGGGTATAAAATCAACTTGGCAAGAATTTTGGAACATCTAGGCTGGGTCAAGGTGATGTTTGCATGAGCCAAGAAAGATTATCTAGATTGTTTATATGGCAATATGGCAATTGAAGCTCCAAAAGAAAATATGGTATGTCCAAATGGAGAAATCGGAATCTATTCGATTAACGATAATCACGACTATTTTCCTATCTAGTATCTAAATGATACTCTCAAGTGACTATCACACTAAACAAAGTTGTCAAAGCTAAGGATAAGATTTTATAAGGATTGAACTTTTGTTCAGTACATCTTTTCATTACATCTATATCTAGGGTTGTCAAACCCAGTGGGAGTTAGTGTTTACATCAAACAAACTCAAGAATAGATATATGTTTCTTTATGAGCGACTCATAGAAACAAAAGGTATTGAATCTACCACAAATTTGAGAACATATGGTTGTTGCTCTAGATAATGTCTTTTAGGAAACCATCATATTTCCAAAAAGGCAAGTGGGAGAAAATGACCTCGAAGTGACCTCAAAAGGACTTCAAGTCAAGCAACAAACAAATGTAGGATACTTAGGAGTGTTTGGAAAAGCTCCGTACTTAGAATCCTTTGGAAGAGCTTCAGGAAGACTTTAGAAGTGCTTCAAGAGAATCCTAATACTCAAAGGACTTGAGTAATTTCTTTATAGACACTAAAGTTTGATGTTCAATACCTAGGTAAATCGTATAAGGAATAGAATTCAACCAAGATAGATACATAGATATCTTGAGGAATGAAAACTATGAAGACTTTGGAAGTGCTTCAAAATATACGACTTACAGGTTAGCTACGACGAATTAAAATTCTCAAGTATGGTTTGAGGCCATCATAAATATTATTATGGTTCGAGGCCATATAAAATGGTTTGAGGCCATTTTATCCAAAGTACATTCATCTTAAAGAATCAAATCTATGATTTGGTTGATTTGCATAAAGGGTTTACTCCCATTAGTTGCAAACATGTTTTTAAAACATACAAAGTTGATTTGCATAAAGGGTTCACTCCCATTAGTTGCAAACATGTTTTCAAAACATACAAAGATGATATTGTATACACATAAAAAAGAAAAGCTAGAGTGGTGGTTAAAGATTATAAACAACTTCACGGCGTTGATAATGTTGAAATCTTTTTCACCAAGTCGGAATGCTTGAACTATTTTGGATAAATCTAGCAATCATTGCATATGGCAATATGGCAATTGGAAAACGAAACACCTTCCTCAATTGGACTTGTAGAAAGTAATTGTGTACATCACACAATGTAAAAGTTTTGGATGCTAGATAAAAGAGCAAGCTTAAGAAATTTATTTGTAGATTAAAGCATGCAAGTGGGAATTGGACCATATTTTTCAACAAGGCTATTGAGAAATCATAGCTTTATGAAAACATGGATCATCTTGTAGATAATGAGTTTAGTGGGAGCTAAGTCAAGTTTATTGGTTCTACATATGAGATACATATCTTTCTATTGAAAATGACATTCAAATTCTAATTAGTTAGATTTAAAAGTATTTTTCAATATTAGAACCATGGAGAAACTTAGAACATACTGGGTTAAAGATCTATTGGATAGGATCTAAAGCGTTGTTCGGATTCTGTAAAAGTAATTACTAAATCAAACACAATTGAGAGACTCAAAAGAGACTCTCAACCCATATGAGTAAGTCTAAGTAATGAATGCTTTAACTTAGTATAAAGCTAGGCTGTTATCACTAAAGTTAAACATGAAGGACCTTGAAGAGGTGCCTTCACCTTATATCACATGGCAATGCCAAGATTTTAGCAAGATTCAGTATCTCTTGAACAGAATAAAGCTAAAAGTTACATGGATAGATTTTAAAATGCGAATGGTTTTTGCATTACAATCAATCATGTATGATGTGATATATAGATCGCCAAGATAACTCGTGAACATTGGATCGTGACGAGTTTATACCAATCTCTATTGATCTAGATCAAAGATCAATAGAACCATATCAAGAACATCTAATACATTTGGATATGTATGATGAGCACTTGATAAGAGGAAGTGAATATGAACTAAAAATTTGATGCTACATGCATTTGCCTAAGAAAAAGTTGAATCTTGTTGTTAGGCAAACCACAAACATACACATGCAATTAGGCGTCATGATTAAAAGCTGGTAACAAAGGTTCTAAACCATATATTATGCATGGGAAACTGAATCAATGATTAGTTTACAAGTTCTCATTTGAAAGATGTATCTCCCACATCTCTGTGAACTGGTTGGAGTATTCCAAAAGGATGGAATCATTTGAAACTCTACATAATTTAAATGAATTCATTGTTCCCTAAGAAGCAATAAAAGGGAATTGTTTTTAGTAGGAGTTCTTCAATAAACTCAGGTTGATCATAAGTCTGCTATCTGGATAATTTTCTATTTTGAATATGAGAATCATTCTAACAGCAATAAAAGACTAGATTATTCTATAAACATATTCAAAGATCTTTTCATCTTACGTCGAAAGTCTTTCGATAGAAAGGATGATAAGAATAGCAAAGTATGATAAACTAAACCTCTGCATTGAATGAGACACAACATTCATATGCAGAAATGGAGTCAAGTTTGAATTCCTTGAATGTTTTAAGTATTAGGTGAAAGGCCTATATCTGTAAAACATTAAATGCTTGATTTTGGGTTAGAGGCCCACAACTTGATAAGCATTTGGTTTAAACATTTATCATTTATGAAATTTATTATTTCATATTCATTTAATTTTGGTTTAGTATTAAATGATAAGTCCATGTGATTCAAAACATTCAAATGGGATGTCAAGATGGATGCTTCGACAAAGAAACACTCATAAGTGAACTTGGATATTGAAGTCACAAAGGATCCCTAATCCAGGTCATTGAAAGGTTGGACGACCAATGACTAATGAAGATTAGATTGCAAGTTGATTTATAGTTCTGTTTCTTGAACTAGATGGACTGGATATCAGAAATCATTTGCATATAGATACTTATTAGATCTTGCATCGGATTGACCATGAGAACACTTTAAGAGATTAAAGTCATGTCATAAGTAGTTCTCATTAATGGTGATTAGAACCATTCCTCAGAACATGAGCGATTATGTTTGCTCGTTTGAGAATTAGTTCGCTTTGATGCTAGCTAAACGTCGCACCGTAAAAGGAGGCTATAAAAGCAGTTATTGGGCGTACTATGAATCAAAGTGAGTGTTCATAGATTGCAAGAATGGATTGTCCTCCTATATTTGATAAAATATGGTGTTGTTGTGTAACAAGGCCTCTCGGAGAGTTAGATACTGTAAAACGCATGGCCGTGCTCAGAATGGTTAAGGCTTAACCTTCTGTAAAAGTTTAACAGTTGAGCTCTGTAATCCGAGAAACACTTCTGGACCTAATAACGATGGCTTGGATCTTACCTTATGTTCAGTAAGTAACACTAAGCGACAAAGGAATGTGAATGCAAACTTGTCTGAATGACAAGTGGGAGACTGAAGGAAATATGTCCTTCACCCAAGGTGCATTTAGTCTAATACCAAGGTTCAGATTAATTGCGAACAATTAATTCAGTGAGATCAAGTGATCGGAACAGCTAACAAGAGAAATGCTTCCGATCAGTGAGTTCTAATGAATATTAAGCTCACATTTTACTCTTGACTTAACCTACAAGGTCACACCAATGGCACGTAATAGATCACCGGATTAAATGAATCGGAAATTCATTTAATAGCTTTTCGGGAATTAGTTTTCGAAAACGTATTATACGATACGACCTTGCATCGGAATCATATATCGTATCGCGAATATTCATACGCTGGGCAAAACGAATAAATCGTATCGTACGGCGCTGATTCGTAGTATACGAGATGATAAATAATATCCGAAAGATATTAGTCGCGAATACGAAGGGCATCGAAGCTGCCGGCCCGTCGAGCCAAGCACGCAAGCGTGCAAGGCCCACGGAGCCTGCAAGACTCGCGAGCAAAGGCGAGCAGCCAGCCCGCGTGTGGCACGAGCACGCAACAGCAGCGCAGCAGCATGGGAGCAACGAGCGAGCAGGCCCATGGCCCAGCTGCTCTGCTGCGCGGCTGTGGGCTTCGGCCTGCAGCGTGGCTGGGCGTTGGGCTGTGGGCGAGTGTCCGTGTGTTTGGTGTGGCCGGTCAAGGCCACTTGGTCTTGGCTATTTACATCATTTAATACAATTAGGTTATTGTATTTTCACACAACTCAGTACACACAAGTTTTCCAACCCTAAACCTAATTCAGAAATTACGTTCTTCAGTTTTCTCTCTCTGTGAAAAATGTTCTTCCCAAAAGCAAAAACTCTTGATTGATTGTCTAAGCTACGGTTATCAAGACGGATCTGATCGTGTCGATGAACCAAGTAGAGGAACGACAAGTGGAGTTCTAAGTTCGTGTTCGTTGACAGATTACTAGGGAAAATACGCTTCGAATGTAAGTTTGCTTAATCTGTGCTTTATACATGTTTCCTGGCTTTGGGGATTGTTTCCGCACATGTTATTATGTTTAACTATATTCCCCTACAGTTTCTTCTTGATTTACATGGATAATATAATTCACACGCAAATAATAACTTCCACTACAACAATTTGTATCTTTAACGACAACCTTATTACGACGGGTGAAAAATCCCGTCGCAAAAGCCTTTTGCGACGGGGCTAAAAACCAAACAATGACGGGAATAACCATCGCAAATATTTTTTACGACGGGTTTACGATGGATTTACGACGTGATTTTCTATTAACGACGGCCCCCTTTTATGACGGGTTCGCGACATGAAATCCCGTCGTTAATCAACAATTATTGGCCTTTCGCGACGGGATTTCCCGTCGTTAATAGTACAATTTCTTGTAGTGTTCTCTTGATTCTAGCATGAATGAGACTCTTGCATATTCATACTACATGCTTGCATAATCTATCAATGACAAACATGCTTTACTAAGTGAATGCATAATAAGATAAGCATCATAATTCTTTATTTGAATCAAATAATCACCACATTCACATATGACCTGATGTTATATGACTTAAATAATAAACCTACGTATGATACTACACACGTATGTGTAGACACCTACTTTTGTCCCTATTCCCGAAAGGGAAGGTTCGATGATGAGAACATAAATCTCCACTTGACAACGCGTCTCCTATAAAATAACGAATCTCAATTCCCCTTTTCATTTCACCCAAAACCTGCTATTTATAGAAACCTGCTATTTATGGAAACCTGCTAAAAATAGTAACTGTCGTAATGGGTAGTTGTTAAAAGTGGCAAGTCATAAAAGATAGAAACCTGTCAGAATTAGGTGTTGCACTCCAACATAAATCCTAAATGAGATAGAAATGGCGAGAGAATCCTATTCCTAATACGATTTGAAAATAAGAGTTACGTATTAATTAAAATCCTAACGAGCCTAGAGTTCGTAACGGGCCCAGATGCATTTCATCATAAAATTAATACGCACTAAAAGACTCGACTAAAGTCTCACACACTCCGGGTTCTAAGAATCCTAATCTGACAAAGAAACGGCCCAGACCCTATTTTCAACGCCTGGCTCTGGGCGCTGAAATTACCTGGGATGTGTTCTTTCCTAATTTCTCGTGGATTAGAGTTCTACAATTCTATCTTTCCACGAACTCTTTTCTATAAATAGGGCCCTAAGTTCGACGTGAAAAGAGGACAACACACAATTATTATTCTGAGTATTGACTCTAAACCCCTAAGCCTAAGCCTCACGCCGCAAAACTGATCACGCGTTCTGTCGCAATCGATCCAAACATCGAACAGAACGTATCCTGTCCTATAATTTGAGATTCGTTAAATAAAAGGAGAAATAGCAAAGTCAAGGTGGTTAGTTTTCTGAGAACCATGACGCACCTCTCAAGGGTGCGTCGTAATGTGTTCCTCTTCCATGGTTTAATTGCTTTCCTCGCCCTTTTATGAACTGTTAAACTAATTAAATCTGATTGTTCTATCACGCCTAATAAAGATAATATGTTGGGAAATTGGATTATCATGCTAGGTCCCTTAAAACAATCTAAATCAGATAATCGCGTTCGATTTAGTACTATATGTTGCATATTGTTAAAATCAACTCAGATTAGTTTAATATTAATAGTTAACGCATGTCCCTTCAATTATTTATGCTGAGCTAGTAAGGATATCCTGCCTCTGGAGTTATCGAAGAGCGAGTACTCCTCTCGGTAGTTACAGTCCCCCGAACCCTCAATCTCTACCTTGCGGGTGTATGTTGAGAGATCCCCACACCAGGGATCACAAGGGAACCTACGGCCGTCGTGGTCAAACATAATTGCACTCCCTTTATGTCACGATAACCGGGTTTTGTCAATTTTTCTCATTGTCGTTAAAAACTGAATGGTGACTCCTATATTACTAGTCAATTGGGTGTAAACTCACAGGAAATCCAATTACACTTGATTTGACAAAAAGAAACGTCACACCCACGAGGGACAAGGTCACGCATTAGCCTCGTGCTTTTTCGACCCCCTCACAATATGCATAATCTACACATATATGTACCTTGAGTACGTTCTCAAATGTGCCACTTTGCTCAATAAATTACTCAATCAAAGCTTCCTCCTTAAATAAATAATAAACTAATTATTGTTCTTCCTTTAATAAATTTTCTGCAACTATTTAATACTTAAAAAGTCATTAAAAACTCTAAACAATCATCATTTAACCTAATTAAATTCCATGCAAAAACTCTGGGTCAAACATGAATTTAAAACAATAAAAATCCATACTTTAAGGTTTAAAACATGCATACTCCTCCCCTTCTTATATATTAGGTATATTTTGACTTTTCAACTCAATATTTAAGCTTAAATATCTCCAAATATTTATGTTACAAAAATATAAAAACTTGATATTGTTAAACTACACATTAAGACGAACAAAATAAGATCTCGCATGAATTTGTTTTGAAGTACGTATTTGAAAGAAATTAGAAGATTCTCTTCAATTGTTAATAGTGTCAAGATTTCAAATGGGACTAATATTCAAGCATACAGGGAGTAATTAAATCTGAAATTTTATGAATGAAATCTATGAAATTTGATTAATTAAATTAATAACATAAATCTGAAAATCAATTAAATTAATCAAGCTTTGAAAAACTCCCTTTTGTTTTTACAAAATTATGCGCAAAACGCAAAAGAAAAGAAGAGGGACACAACTCACCAAGTGCACGGAGGCACGGTGACGAGAAGGTTGGTGAGAACAGCCGCCGGAGGCTGCTGGTGGTCGGTGGTGGCCGACGACGCACAACCACGAAGAAGAAAATGAAGAATTAGGGCTGCGAACTTTTAAATTGGCCATAACTCTTAATATACAACTTGAAATAAAAGGATTCTTGAGGGAAAATTCAATAAATTTTTGAGATATACAATTTTGATGAAGGAACCTTTGGCGAAAAACAGCCACATGGATGTGGAGTAAGGTTGAACAGAAGTTCAACGAAAAGAGGAGAGAAGTTAGGGTTAGGATTTTGCTTTTGTGTTTAATGAATATTTAGGTATGAAATTTCATGCCTAAGATCCTTTATATAGGCTTCCAAGAAATGGTAGAAAGATATTAAAAATCTTTTTGGAGTTGAGAAAAGACATAAAAACCCTTAATTAAAATTGCCACCCTTTTCTATTTTTGGATTCTCAATCCCTTTCAAAAACTATTTACATTAAAGGAAATATTAAAAGTTTTTATTTTCTAAAAGACATTTAATAAATATTAAATGCAATTAAATTCTCCTTTATAATTTATATGATTTACTAATCATATAAATGCTTTTAAAATGCTTAATTAAGTTATAAATATTTTAAAATTATATTTATAAAATAATAAAAATACGGGGTATTATAGTCTACCCTCCTTAAAAGAAGTTTCGTCCTGAAATTTGGCCTTGAAAAATAACTTCTCCTTGAAAACTTTGAATGCTACTAATTAAGCTTCTTTCGTGAAAATTTTATGCTTCTTTGAAAAACTACTATGCTTTCTTTGAAAAACTACTATACTTTGATTCTCTTTTAGTTGTTGGATTTTCTACTTTGCCAAAACTTTTTGGCTACTTTACTTCTACTAGTATTCCCTACACACTTACTGTGCAAGAGACAACTTTTACTTGTTTCTACTACTATTTCTTACATACTTACTGTGCAAGAGACAACTTTCACTTCTTGCTACTACTATTTCTTACACACTTACTCTGCGTCTATGGAAGAGACAACTTTCAAGTGCAAATTGCAACAAAAAGTNTTCTTACACACTTACTCTGCGTCTATGGAAGAGACAACTTTCAAGTGCAAATTGCAACAAAAAGTACTAAAATGAGCAAAATTTAGGTGAAAAGCGCTAAATTCTACCGCACTCTACCCCCCCCCCCNTTCCCCCCCCCCCCCCCTAAAGACACGAGTTACGACCCCGCAACTCAACTAACCTCGGAAAATAATTTTGGGTATTTCTTTCTCATTTCATCTTCTTCCCATGTTTCTTCCTCAGTCTCTTGGTTAGAGCATAAAACTTTCGCTATTTTCACATTTTTCGTGCGTGTACGTACTACGCAGTTTACTATCTAGAATCTTGACAGGTCTTTCCTCATACGTCAAGCTAGTGTCTAACTCAACTGTTTATGGTTGCAATACATGAGACTTATCTGGGATATACTTTCGCAGCTGCGAGATGTGAAACACATTATGAATTCTATGAAGGTCCATTGGCTATGCTAACTGATAGGCTACCTTTCCCACTCGTTTTAGGATCTCATAGGGTCTTATATACTTTGGGCTAAGCTTTCCCTTTTTCTCAAATCTCATGACTCCTTTCATGGGTGAAACCTTAAGTAACACCTTATCCCCTACTTCGAATTCTAGCTCTCTACGCTTCAAGTCCAGTAGCTCTTCTGCCTATCTTGGGCAGCTTGGATCTTTACTTGAATATCTCTCACTTTGTTCATTGTATGTTCTATCATTTGAGGACCTAAAACGACGGTCTCACTAATGTCCCTCCAACATAGTGGACTTCTACACTTCCTTCCATATGATGCCTCAAATGGTGTCATTCCAATACTGGCATGATAACTATTATTGTATGAGAACTTTAGCAAGCCTAAACTTTCTTCCCAAACTCCTTTGAAGTCAATGACACAAGCTCGAAGCATGTCTTCAAGTGTCTGAATAGTCCTTTATGTCTGTCCATTTTTCTCTGGATGGAATGTTTTACTCATCTTCAATGTAGTACCAAAGTTCTCTTGAACACTTTTCCAGAATTTCGAAAGAAATCTAGAATCTCTATTTGGAACTCCATGCAGTCTCACAACATACTTGATGTAAGATTTTGCCAACTGTTCCATTTTTCAAGTCTCTTTCATGGGGATAAACAATGCTAACTTGGTTAGCCTATCTACTACTACCCATATGGTATCATAACCTGTTTTGGATCGCAGAAAAACACGTGACGAAATCCATAGAAATACAATCACATTTCCAGCTTGGAATCTCTAGTGGTTGAACTTTCCCTTGAGGCCTTATATGCTCTATTTTGACTTTCTGGCAAGTCAAACGTCGCGAAACGAATTCATCGACTTCATTATTCCTTCTAGGCACCCAGTAAACCTTCTTAAGGTCCTTATACAACTTGTCACCTCCTAGGTGCACTGAATAGGGTGTATTGCGCCCTTCCTCCATAAGCTTTTGATTCAATCCTTCACACTTTTTTGGTACACACCACCTTCCTTTATACCTCAATCTACCATCCTCGTGAATCTTGAAAATCAACTCTTGTCGTTGCAAAATTTTCTTTTTGATTCGATCCAACATAACATCTCCTACTTTGTTCTCCTTGATCTCATCAAATATTGTTGGTTGAATAGTCAGAATGCTCAATATATCCTCGAATACCTCACCCTCTACAAGCTCTAGGCTTAACCTTTCCATATCCTTACAGAGCTCGTCTGGTACTACCAGAGAGTTCACTCCATGGCTTGATTTTCTACTTAGAGCATCCGCAACAACATTTTCTTTTCCTTCATGGTACTAGATGTCTAAATCGTAGTCCTTGTCAACTCTAGCCACCTTCTTTGGCGCATATTCAAGTCCTTTTGTATAAAGATATACTTCAAACTCTTGTGATCCGTGTAGATCTTACACTTCACACCATATAAGTAATGCCTCCATATCTTTAGTGGAAAGACTATTTCTTCTAACACTAGGTCGTGGGTAGGGTAATTTGCTTCATATAACTTCAACTTTTGGGACGCATACGCAATCACCTACCGGTTTGCATCAAAACACAACTGAATCCATCATTAGAAGCATCACTAAACACGTCATAACAATCTCTCTCATCTGGTAAGGTTAACACTGGCGTAGAAGTTAAACTGGTTTTCTGAATCTGAAATGCCTCCTCACACTTATCACTCTGGATGAACTTAGACTCTTTCTTCATAAATGAAGTTATAGGCTTAGCAATCCTCGAGAAATCGTTTACAAACCTTCTATAATAGCCTGCTAAGCATAAGACACTTCGAATGTCCGTCCCACTCTTGGGTGTAGGCCATTCACTAACTCCCTTGTTATTTGATGGATCTACTTCAACTCCTTTCTTAGACACGAAATGTCCTAAGAATGAGAATTTCTCCAACCAAAACTCGCACTTGGAGAACTTAACATTCAACTCATTTTCCCTTAATGTAGCCAACACTGACCTTAAGTGTCCTACATGCTCTCCTTCATCCTTTTAATACACAAGAATATCATCGATGAAAACCACACCGAACTTCTGGTACATGCTTGATCCATGGTAAAATTTTCATGCTTGATCCATGGTAAAATTTTCAGATTTTTCCGATAAATATAAACCCTAATTTTGCCTTTCCCCAATTCGTAAAATTTGAAACCCTAATTGAATTTTAATTAATTTTGGTTTAATAATTCGGTTAATTGGGAAAGGGGATATAATTTCATGGGTCAGTGGCTAATTTTAAAAATTATTGGATTAAAATTTTGAATGGTTTCGTTAATTTTAATCGCACTTAAACCAAATTATTAAACATCTGAAATTTAATCGTTAAAAATCATTGTTTTTCGAAAATAAAAATCGTAACTTTTTGAAAAATAAAATTAATGCAAGTTCGTGATATTAAATTTAATTTTAATTAAGTTGGTCCGTATCACGAACCAAGGGCACGAACATGAGCATGGTGGACGTATGGCTCGTCGAGCCATGCGGGGCCATTGTGCTTGACCGAGCCGCATGCGACACGGGCAGCAGCAGGTACGATGCGTGCCTCGTGCGCGCTGGGCGAGGAAGGGCAGGCGGGTATGCTTGCGGGGCTGCGACGAAGCAAGGCGCGAGCCATGGGACGTCCAACACACACACGACGCACAACACGCACGCAGGGGCATACGCTGCGGGGACGCGATGCGCGCGCGGGGCTGGGGGTGTGCGAGCCTTGCTCGTGCGCTCTTGGGCCTCACGCAAGGCAGGGGCTAGGCGCAAACCTAGCCCGACTAAGTAATTGGACTTTTTTTTGTTAAAAATTGTTTAATTCGTTGGGCTTCGTATATTTGCATTAATTTGGGCTAACGGGATATTTAATTTAATATTTTATTTATTTGGGCCGGGCCGCGAGTTTTAATTTAATATTTCATAATTAATTATCCGGAATAATTATTGGTTTGAGTGGGGGCCACTAAATGAAATTAAAATGAAATAATTATTTTTAATTATTTTCGTAGGTCGCATTATTTTAATTAAATTCAATTTTAATTAGAATAAAGTCTAAGGATTAATGATTTGGAAATTGATTAATCTTTTAGGACGCGTTTATGTGAACGTGAATTTTAATTAATTCACGTAAATAATTGCATATTAACATGGGCCATTCGTTTTAGCACACGAATGGGTGAATGCATAGAATATATATTTTATGTAATGCAGGTACTCCAAGTGACTAGTATGGCCAATTTAGGATAGTTAAATACGGTCTGCGTACCGTTCTATCTTTGAATGTAAAGTTTTAAATATGGTCTGCGTACCATGGAAATTTTGATGTAATTTATTATTTTCAAGTATTTCTAAGTTTAGAACTTTAAGTTAGCATTTGAACGAAGATTCAAGACGATGCCAAGCTAACAAGGAGGTGATGAAGATTGGATGCTTCAAGACAAGATGTTTTGGGCCATACTAGATCACCATTTATTTATGCACTTCTAGATATATATTATGCGTGAATGTATGAATGTATGTATGCTTTGCATGAACAGGTAGTTTCCTATGAATCGATTAGTTTTAAGTTCACTAAATAATCGAACCAACATAGAAACAACTAGGTCCAAGTAATATTGAGTTTAAAAATTGCCTTCCAAATCAACACTTACAAAAATCTAGGGATCTAAGATATTAGGTTTACGCTAAAGCGAGGTGCTATTTTAGTTGACTTAGGTGGTAAGGTGTCCTAAAGGAGCACGTTGATTGTGGTTACAACTCAAACAACAATGGCATTAAGTTGTGGCAATGGGATAAATTATGGCATTAATTTATTAACCAAGAGTAATTTGGAGATTACTAGCAATAGGTTTTGCTTACCTGAAATCTTAAACTACTTAAGACATGCTAAAGCTGCTTAAGGATTTAGGACTTTTGGGGTCTTGGAATCGTTTCATTCATTTTGGACCATGTTTTTTGCTTTTTGCATGAATGAAATGTTTTAATAGCTTTAATGATTGCATGTTTTGCTTTTATTTCAAAGTTATTGAATTGTATGAATGGTTATTTATTGCAAATTCTTTTCGATTGTAGTAATCAAAATGGCCGCGATCAAAACAAAACTCAAAGTAACTGAAATTCTGGATGTAAAATTGAACCTATCAAACTTTCTTGATTGGGAGAGGAAGCTTCGGCAAGTCCTCAGGTGGAACAACATTGAAAATGTAGTTGACCATCCCATCCCCAGCTATTACTCAAAGGATATGATTCCAGAAAAGCACTATGCGTGGGCGTACCACATGTCGCTAGTGATGGATTTTATTCTTGGCTCTATCCCCAATGATTGGAGTGCAAGGTTCGTTGCATACGAGCCATGGGCACTCCTAAGGCATCTTAGGGATATATGTCGTGGTAGATTCCAACATGGTGGTCAACATGTCGACCAAAATGTTTTTGAATTGGTAAATTCATTTGAGGATCTAAAGCTTAACGCTCCACTGGGTTGTTGCTTTGACGTCGAAAGACAAAAAGCAAGGGAAAGGGTCATTGATCTTGAAATGACAAAAGGACTCCAATCAGAACTCATACAAAGAAAATGGTTGGGCTTCTCAGCCGGCTTGAGTTACTTGGTGATCCATTCCCAGATTCTGCAGCTGCGGGAATACTTTTGAATTCTCTTCACCCTGGTTATAAGAAATTCAAACTACTCTATTTCTCCAAGAAAAGGGAGAATACTCTTAGTGAACTAATTTACTTGCTTCATCAGTACGAATTGGACTTTGTAAGTGATAAGCAAGCATCGCTAAAAGTAAAGAGTAAGAAAATCAAGAAAAAGGTTCCGGGGAAGATCCAAAGCAAGGGTGCATCTCCATCTACTTCAGGAAGGCAAGTGGCGCCATCCAAGAAGAAGATGAAGAAGGATCGTTCTCCATCTACATCGCAATGCTTCAATTGTAATGAAATTGGTCATTACAAGCGAGATTGCCCCAAACTAAAGGAAGAGAAGAAGGACGGAAACGTTGCTTCTCCTTCATGTATGTTATACATTGTAATCTTGCTAATTCTACTTCTTGGGTATTAGATACTGGTTGTGGCTCACACTTATGTTCCAATTCACAGGGACTAAGGAGAAGTAGAAAGCTTGATAAAGGCGAGATGGATCTACGCGTGGGAAATGGAGCACGGATTGCTGCATTAGCCGTAGGATCTTATTTTATTTCTTTGCCTAGTGGGTTTGTTTTGGAACTAGAAAACTGTTACTATGTTCCTAGTATCACCAGAAACATCATTTCCGTTTCAAGTTTGGATTCTAAAGGTTTTAGTTTTCAATTTAAAGACAATAGTTGTTCTTTTTCTTTGAATGGAATGTTTTATGGTTCAGCACAACAAGAAAACGGTCTTTATGTGCTAGATACGAGCAAACACATTTATAACATAAATACCAAAAAGGCTAAAACTGGTGATTCGGATCTCACATTTATGTGGCATTGTCGATTAGGCCATATAAACATAAAGCGCATGGAATTACTTCAACGGGAAAGAATTCTAGAATCATTCGACTTAGAAAAGATTGATCAATGCGAATCTTGTTTACTTGGAAAAATTATAAAGCAACCTTTCTCAAAGGTGGGAGAAAGAGCAAGCGAACTACTAGGGCTAATACATACGGACGTATGTGGGCCTATGAGTACGAAAGCTAGAGGTGAGTTCAGCTATTTCATAACGTTTACGGACGACTTCAGTAGATATGGCAATATTACTTAATGAAGCACAAGTCTGAATCGTTTGAGAAATTCAGAGAATTTCAAAATGAAGTAGAGAATCAACATGGCAAGAAAATCAAAGCTCTAAGATCGGATTGAGGAGGTGAATATCTTAGCCACGAGTTTGATGACCATCTAAAAGAATGCGGTATTCTTTCTGAATTGACTGCTCCGGGGACACCTCAATGGAATGGAGTGTCGGAACGGAGAAATAGGACCTTACTCGATATGGTCAGGTCAATGATGGGTCAGGCCGAACTTCCTTTACAGTTCTGGGGACATGCGTTGCAAACTGCAGCACTCACACTGAATCGTGCTCCGTCAAAAGCTGTTAGAAAGACTCCATATGAATTATGGACTGGGAAACTTCCAAAGTTGTCTTTTCTGAAGATTTGGGGTTGCGAAGCATATGTCAAGCGATTAATTTCGGACAAGCTACAACCTAAATCTGACAAATGTTTCTTCGTTGGGTATCCAAAAGAAACTATGGGGTATTACTTCTACAACAAGTCAGACAACAAGGTATTCGTTGCTCGTGACGGTGTCTTTTTGGAAAGAAATCATATTTTCAAATTGACAAGTGGGAGAATAATAGACCTCAAAGAGATTCGAGACGAACAACGAACTCAGAACTCTTTAGAAGCAGTTCAAGTTGATGAACCTCCAAGGTCTTTAGAAGAGCCAGTGGGAGTAGTTCCTCAAAACGTTGTTGCCCCTCGTAGGTCAAATAGAACTATTTTTCAGCCGGATAGATGGACATGCGTCCTCTTGACTGAAAACTTAGACGTTCTCATATTGGATAGTGATGAACCTTTGACTTACAAGGAAGCTATGACGAGCCCAAGCTCCATTAAATGGTTAGAGGCCATGCAATCTGAAATAGACTCCATGTCTGAAAATCAAGTCTGGGATTTGGTTGATTGGCCGGATGGGTTCACACCTATCGGATGCAAATGGGTCTTCAAGTTGAAGAAAGACAAAGATGGAATTGTATACATATACAAATCTAGATTGGTAGCAAAAGGTTACAGGCAAGTTCACGGCGTTGACTACGATGAAACCTTTTCTCCAGTCGCGATGCTTAAGTCTATTCGGATAATCCTTGCGATTTCCGCTTTTCATGACTATGAAATATGGCAAATGGATGTAAAAACTGCCTTCTTGAACAGTGTTCTTGAAGAGACTGTGTTTATGACACATCCGGAGGGTTTTGTCGATCAAAAGAGCCAAGGAAAGGTATGCAAGCTTAAGAAGTCCATCTACGGACTAAAGCAGGCATCAAGGAGTTGGAATAAACGATTTGATGAAGCAGTCAATAAGTTTGGCTTCATCAAGAATCAGGACGAATCTTGTGTATACAAGAAGGTCAGTGGGAGTAAAATTGCATTCCTAGTCTTGTATGTTGACGACATACTGCTTATTGGAAACGACATTCCTATGTTGGATTCTGTAAAGACTTCGCTCGGGAAGTGTTTCTCAATGAAGGACTTAGGAGAGGCACAGTACATATTGGGCATCAAGATGTATAGGGATAGATCTAAAAGGATGATTGGACTAAGCCAAAGGACTTACATTGACAAAGTGCTAGCTAGGTTCAATATGATGGAAGCCAAGGGAGGTCATCTACCCATGTCACATGGCATATATCTAAGCAAGAATCAGTGTCCCAAAACATCTGATGAGCATAGAAAGATGAGTGGAATTCCATACGCTTCGGCTATTGGATCCATCATGTATGCTATGATTTGTACAAGGCCGGATGTTTCGTTTGCACTCAGTGCAACGAGCAGGTACCAGTCAGAACCAGGTGAGGCGCATTGGACTGCTGCCAAGAACATCCTAAAGTACCTGAAAAGGACTAAGGACCATTTTCTGTTTTATGGTGGTACAGATGAGTTGATTGTTAAGGGCTATACGGACGCAAGCTTTCAAACCGACAGAGATGATTTCAGATCACAGTCTGGGTTTGTGTTCTGCCTCAACGGCGGAGCAGTAAGCTGGAAAAGTGCTAAGCAAAGCACTATTGCGGATTCTACAACTGAAGTCGAGTACATTGCTGCCTCGGAAGCAGCAAAGGAAGCTGTTTGGATTCGGAAGTTCATCGAAGAACTTGGTGTTGTCCCCTTCATTAAAGGACCAGTGGCTTTGTATTGCGACAATAGCGGAGCCATTGCCCAAACAAAGGAGCCTAGGAGCCACCAGAAGTCCAAGCACGTACTGCGGCGATTTCATATACTTCGAGAGATCGTTGAAAGAAAGGAAATCGAGATTTGCAAGGTTGGAACTGACGACAACGTCGCGGATCCATTGACTAAACTGTTGCCACAAGTGAAACACAACGCACATGTAGCAACCATGGGAATCAAGCATGTTGGAGAATGGCTTTGATTTTCTAAGTATTGTTTTAGAACATCTGTTAGATCTATGTTTAAAACAATTGGTTTAACCATTTCATATTTATGAAATTTATTTATTTCATATTCATTTAATTGTGGTCACTACACCAAAATGAGCAATTAGCAGCACCTCATTGATAGCGTTTATGAAAAAGCGTTGTCATTTATATCAACAACACCTAATTGATAGCGTTTATGAAAAAACGCTCTCATTATTATCAAGTAACAACACATTATGTTGTAGTGCACTTGATAATACAGCGTTTATTATTAA

mRNA sequence

ATGGGTACACTTGATGATATGAATCATTTGAAACATAAACGTATTAGGTCTGTCACAGATCTCTTACAAGATCAATTCGGATTGGCTCTAGTTCGTTTAGAAAACGTGGTTCGAGGAACTATAAGTGGAGCAATTCGTCATAAATTAATACCGACTCCTCAGAATTTGGTAACTTCAACTCCATTAACGACTTTTGAATCTTTTTTTGGATTACACCCATTATCTCAAGTTTTGGATCGAACTAATCCATTGACACAAATAGTTCATGGGAGAAAATTGAGTTATTTGGGTCCTGGGGGATTGACAGGGCGAACCGCTAGTTTTCGGATACGATATATCCATCCTAGTCACTACGGGCGTATTTGCCCAATTGACACATCTGAAGGAATCAATGTTGGGCTTATTGGGTCCTTAGCAATTCATGCGAGTATTGGTCCTTGGGGGTCTCTAGAAAGCCCTTATTATGAAATTTCTGAGAGATCAAAAAGGGTACAGATGCTTTATTTATCACCAAGTAGGGATGAATACTATATGTTAGCGTCCGGAAATTCTTTGGCCCTGAATCAAGGTATTCAGGAAGAACAGGTTGTTCCAGCTCGATATCGTCAAGAATTCTTGACTATTGCGTGGGAACAGGTTCATTTTCGAAGTATCTTTACCTTCCAATATTTTTCTATTGGAGCTTCTCTCATTCCTTTTATCGAGCACAATGATGCAAATCGAGCTTTAATGAGTTCTAATATGCAACGTCAAGCAGTTCCGCTTTCTCAGTCCGAGAAGTGCATTGTTGGAACGGGGTTGGAACGCCAAGTGGCCCTAGATTCGGGGGTTCTCACTATAGCCGAACATGAGGGAAAGATCATTTATACCAACACTAACAAGATTGTTTTATTAGGGAATGGGAATACTGTAAGCATTCCATTAGTTATGTATCAATGTTCCAACAAAAATACTTGTATGCATCAAAAACCTCAGATTCCGCGGGGGAAATGTGTTAAAAAGGGGCAAATTTTAGCAAATGGTGCCGCTACAGTTGGTGGTGAGCTAGCTTTGGGAAAAAACGTATTAGTAGCTTATATGCCGTGGGAAGGTTACAATTTTGAAGATGCGGTACTCATTAGTGAGCGTCTTGTGTATGAAGATATTTATACTTCTTTTCACATACGGAAATATGAAATTCAAACTTATGTGACAAGTCAAGGTCCTGAAAAGGTCACTAGCGAAATACCACATTTAGAAGCTCATTTACTCCGCAATTTAGACAAAAATGGAATTGTGAGGTTGGGATCATGGGTAGAAACAGGAACCTTTGGCGAAAAACAGCCACATGGATGTGGAGTAAGGTTGAACAGAAGTTCAACGAAAAGAGGAGAGAAGTTAGGCGTTTATTATTAA

Coding sequence (CDS)

ATGGGTACACTTGATGATATGAATCATTTGAAACATAAACGTATTAGGTCTGTCACAGATCTCTTACAAGATCAATTCGGATTGGCTCTAGTTCGTTTAGAAAACGTGGTTCGAGGAACTATAAGTGGAGCAATTCGTCATAAATTAATACCGACTCCTCAGAATTTGGTAACTTCAACTCCATTAACGACTTTTGAATCTTTTTTTGGATTACACCCATTATCTCAAGTTTTGGATCGAACTAATCCATTGACACAAATAGTTCATGGGAGAAAATTGAGTTATTTGGGTCCTGGGGGATTGACAGGGCGAACCGCTAGTTTTCGGATACGATATATCCATCCTAGTCACTACGGGCGTATTTGCCCAATTGACACATCTGAAGGAATCAATGTTGGGCTTATTGGGTCCTTAGCAATTCATGCGAGTATTGGTCCTTGGGGGTCTCTAGAAAGCCCTTATTATGAAATTTCTGAGAGATCAAAAAGGGTACAGATGCTTTATTTATCACCAAGTAGGGATGAATACTATATGTTAGCGTCCGGAAATTCTTTGGCCCTGAATCAAGGTATTCAGGAAGAACAGGTTGTTCCAGCTCGATATCGTCAAGAATTCTTGACTATTGCGTGGGAACAGGTTCATTTTCGAAGTATCTTTACCTTCCAATATTTTTCTATTGGAGCTTCTCTCATTCCTTTTATCGAGCACAATGATGCAAATCGAGCTTTAATGAGTTCTAATATGCAACGTCAAGCAGTTCCGCTTTCTCAGTCCGAGAAGTGCATTGTTGGAACGGGGTTGGAACGCCAAGTGGCCCTAGATTCGGGGGTTCTCACTATAGCCGAACATGAGGGAAAGATCATTTATACCAACACTAACAAGATTGTTTTATTAGGGAATGGGAATACTGTAAGCATTCCATTAGTTATGTATCAATGTTCCAACAAAAATACTTGTATGCATCAAAAACCTCAGATTCCGCGGGGGAAATGTGTTAAAAAGGGGCAAATTTTAGCAAATGGTGCCGCTACAGTTGGTGGTGAGCTAGCTTTGGGAAAAAACGTATTAGTAGCTTATATGCCGTGGGAAGGTTACAATTTTGAAGATGCGGTACTCATTAGTGAGCGTCTTGTGTATGAAGATATTTATACTTCTTTTCACATACGGAAATATGAAATTCAAACTTATGTGACAAGTCAAGGTCCTGAAAAGGTCACTAGCGAAATACCACATTTAGAAGCTCATTTACTCCGCAATTTAGACAAAAATGGAATTGTGAGGTTGGGATCATGGGTAGAAACAGGAACCTTTGGCGAAAAACAGCCACATGGATGTGGAGTAAGGTTGAACAGAAGTTCAACGAAAAGAGGAGAGAAGTTAGGCGTTTATTATTAA

Protein sequence

MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTSTPLTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYGRICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYMLASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVLLGNGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRNLDKNGIVRLGSWVETGTFGEKQPHGCGVRLNRSSTKRGEKLGVYY

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo11874	Spo11874	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo11874.1	Spo11874.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11874.1.CDS.3	Spo11874.1.CDS.3	CDS
Spo11874.1.CDS.2	Spo11874.1.CDS.2	CDS
Spo11874.1.CDS.1	Spo11874.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11874.1.exon.3	Spo11874.1.exon.3	exon
Spo11874.1.exon.2	Spo11874.1.exon.2	exon
Spo11874.1.exon.1	Spo11874.1.exon.1	exon

Homology

[Close]

BLAST of Spo11874.1 vs. NCBI nr
Match: gi|11497516|ref|NP_054924.1| (RNA polymerase beta subunit [Spinacia oleracea])

HSP 1 Score: 852.0 bits (2200), Expect = 4.700e-244
Identity = 427/436 (97.94%), Postives = 430/436 (98.62%), Query Frame = 1


		  
Query: 1   MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 60
           MGTLDDMNHLKHKRIRSV DLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST
Sbjct: 300 MGTLDDMNHLKHKRIRSVADLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 359

Query: 61  PLTT-FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYG 120
           PLTT FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR IHPSHYG
Sbjct: 360 PLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYG 419

Query: 121 RICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML 180
           RICPIDTSEGINVGLIGSLAIHA IGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML
Sbjct: 420 RICPIDTSEGINVGLIGSLAIHARIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML 479

Query: 181 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHNDA 240
           ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIF+FQYFSIGASLIPFIEHNDA
Sbjct: 480 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFSFQYFSIGASLIPFIEHNDA 539

Query: 241 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVLLG 300
           NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVL IAEHEGKIIYTNT+KIVLLG
Sbjct: 540 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLAIAEHEGKIIYTNTDKIVLLG 599

Query: 301 NGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLVAY 360
           NGNTVSIPLVMYQ SNKNTCMHQKPQIPRGKCVKKGQILA+GAATVGGELALGKNVLVAY
Sbjct: 600 NGNTVSIPLVMYQRSNKNTCMHQKPQIPRGKCVKKGQILADGAATVGGELALGKNVLVAY 659

Query: 361 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 420
           MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN
Sbjct: 660 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 719

Query: 421 LDKNGIVRLGSWVETG 436
           LDKNGIVRLGSWVETG
Sbjct: 720 LDKNGIVRLGSWVETG 735

[Close]

BLAST of Spo11874.1 vs. NCBI nr
Match: gi|628819100|gb|AHY80533.1| (RNA polymerase beta subunit (plastid) [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 837.4 bits (2162), Expect = 1.200e-239
Identity = 420/436 (96.33%), Postives = 426/436 (97.71%), Query Frame = 1


		  
Query: 1   MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 60
           MGTLDDMNHLK+KRIRSV DLLQDQFGLALVRLENVVRGTI GAIRHKLIPTPQNLVTST
Sbjct: 300 MGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTIGGAIRHKLIPTPQNLVTST 359

Query: 61  PLTT-FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYG 120
           PLTT FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR IHPSHYG
Sbjct: 360 PLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYG 419

Query: 121 RICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML 180
           RICPIDTSEGINVGLIGSLAIHA IGPWGSLESPYYEISER+KRVQMLYLSPSRDEYYML
Sbjct: 420 RICPIDTSEGINVGLIGSLAIHARIGPWGSLESPYYEISERAKRVQMLYLSPSRDEYYML 479

Query: 181 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHNDA 240
           ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIF+FQYFSIGASLIPFIEHNDA
Sbjct: 480 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFSFQYFSIGASLIPFIEHNDA 539

Query: 241 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVLLG 300
           NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVL IAEHEGKIIYTNT+KIVL G
Sbjct: 540 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLAIAEHEGKIIYTNTDKIVLSG 599

Query: 301 NGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLVAY 360
           NGNT+SIPLVMYQ SNKNTCMHQKPQI R KCVKKGQILA+GAATVGGELALGKNVLVAY
Sbjct: 600 NGNTLSIPLVMYQRSNKNTCMHQKPQISRDKCVKKGQILADGAATVGGELALGKNVLVAY 659

Query: 361 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 420
           MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN
Sbjct: 660 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 719

Query: 421 LDKNGIVRLGSWVETG 436
           LDKNGIVRLGSWVETG
Sbjct: 720 LDKNGIVRLGSWVETG 735

[Close]

BLAST of Spo11874.1 vs. NCBI nr
Match: gi|910354309|ref|YP_009160794.1| (RNA polymerase beta subunit (chloroplast) [Haloxylon ammodendron])

HSP 1 Score: 830.5 bits (2144), Expect = 1.500e-237
Identity = 413/436 (94.72%), Postives = 426/436 (97.71%), Query Frame = 1


		  
Query: 1   MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 60
           MGTLDDMNHLK+KRIRSV DLLQDQFGLALVRLENVVRGTI GAIRHKLIPTPQNLVTST
Sbjct: 300 MGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTST 359

Query: 61  PLTT-FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYG 120
           PLTT FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR IHPSHYG
Sbjct: 360 PLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYG 419

Query: 121 RICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML 180
           RICPIDTSEGINVGLIGSLAIHA IGPWGSLESPYYEISERSKRVQ+LYLSPSRDEYYML
Sbjct: 420 RICPIDTSEGINVGLIGSLAIHARIGPWGSLESPYYEISERSKRVQILYLSPSRDEYYML 479

Query: 181 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHNDA 240
           ASGN LALNQGIQEEQVVPARYRQEFLT+AWEQVH RSIF+FQYFSIGASLIPFIEHNDA
Sbjct: 480 ASGNPLALNQGIQEEQVVPARYRQEFLTVAWEQVHLRSIFSFQYFSIGASLIPFIEHNDA 539

Query: 241 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVLLG 300
           NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVL IAEHEGKIIYTNT+KI+L G
Sbjct: 540 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLAIAEHEGKIIYTNTDKIILSG 599

Query: 301 NGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLVAY 360
           NGNT+SIPLVMYQ SNKNTCMHQKP+IP+G+CVKKGQILA+GAATVGGELALGKNVLVAY
Sbjct: 600 NGNTLSIPLVMYQRSNKNTCMHQKPRIPQGQCVKKGQILADGAATVGGELALGKNVLVAY 659

Query: 361 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 420
           MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEK+TSEIPHLEAHLLRN
Sbjct: 660 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKITSEIPHLEAHLLRN 719

Query: 421 LDKNGIVRLGSWVETG 436
           L+KNGIVRLGSWVETG
Sbjct: 720 LNKNGIVRLGSWVETG 735

[Close]

BLAST of Spo11874.1 vs. NCBI nr
Match: gi|1020267076|gb|AMZ03427.1| (RNA polymerase beta subunit (chloroplast) [Bienertia sinuspersici])

HSP 1 Score: 825.1 bits (2130), Expect = 6.200e-236
Identity = 413/436 (94.72%), Postives = 425/436 (97.48%), Query Frame = 1


		  
Query: 1   MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 60
           MGTLDDMNHLK+KRIRSV DLLQDQFGLALVRLEN VRGTI GAIRHKLIPTPQNLVTST
Sbjct: 300 MGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIRHKLIPTPQNLVTST 359

Query: 61  PLTT-FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYG 120
           PLTT FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR IHPSHYG
Sbjct: 360 PLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYG 419

Query: 121 RICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML 180
           RICPIDTSEGINVGLIGSLAIHA IGP GSLESPYYEISERSKRVQMLYLSPSRDEYYML
Sbjct: 420 RICPIDTSEGINVGLIGSLAIHARIGPLGSLESPYYEISERSKRVQMLYLSPSRDEYYML 479

Query: 181 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHNDA 240
           ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIF+FQYFSIGASLIPFIEHNDA
Sbjct: 480 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFSFQYFSIGASLIPFIEHNDA 539

Query: 241 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVLLG 300
           NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVL I+EHEGKIIYTNT+KI+L G
Sbjct: 540 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLAISEHEGKIIYTNTDKILLSG 599

Query: 301 NGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLVAY 360
           NGNT+SIPLV+YQ SNKNTCMHQKP+IP+GKCVKKGQILA+GAATVGGELALGKNVLVAY
Sbjct: 600 NGNTLSIPLVIYQRSNKNTCMHQKPRIPQGKCVKKGQILADGAATVGGELALGKNVLVAY 659

Query: 361 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 420
           MPWEGYNFEDAVLISERLVYE+I+TSFHIRKYEIQTYVTSQGPEKVT EIPHLEAHLLRN
Sbjct: 660 MPWEGYNFEDAVLISERLVYENIFTSFHIRKYEIQTYVTSQGPEKVTREIPHLEAHLLRN 719

Query: 421 LDKNGIVRLGSWVETG 436
           LDKNGIVRLGSWVETG
Sbjct: 720 LDKNGIVRLGSWVETG 735

[Close]

BLAST of Spo11874.1 vs. NCBI nr
Match: gi|836613822|ref|YP_009143631.1| (RNA polymerase beta subunit (chloroplast) [Salicornia brachiata])

HSP 1 Score: 824.3 bits (2128), Expect = 1.100e-235
Identity = 412/436 (94.50%), Postives = 425/436 (97.48%), Query Frame = 1


		  
Query: 1   MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 60
           MGTLDDMNHLK+KRIRSV DLLQDQFGLALVRLEN VRGTI GAIRHKLIPTPQNLVTST
Sbjct: 300 MGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTIGGAIRHKLIPTPQNLVTST 359

Query: 61  PLTT-FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYG 120
           PLTT FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR IHPSHYG
Sbjct: 360 PLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYG 419

Query: 121 RICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML 180
           RICPIDTSEGINVGLIGSLAIHA IG WGSLESPYYEISERSKRVQMLYLSPS+DEYYML
Sbjct: 420 RICPIDTSEGINVGLIGSLAIHARIGLWGSLESPYYEISERSKRVQMLYLSPSKDEYYML 479

Query: 181 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHNDA 240
           ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIF+FQYFSIGASLIPFIEHNDA
Sbjct: 480 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFSFQYFSIGASLIPFIEHNDA 539

Query: 241 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVLLG 300
           NRALMSSNMQRQAVPLS+SEKCIVGTGLERQVALDSGVL IAEHEGKIIYTNT+KI+L G
Sbjct: 540 NRALMSSNMQRQAVPLSKSEKCIVGTGLERQVALDSGVLAIAEHEGKIIYTNTDKILLSG 599

Query: 301 NGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLVAY 360
           NGNT+SIPLV+YQ SNKNTCMHQKP+I +GKCVKKGQILA+GAATVGGELALGKN++VAY
Sbjct: 600 NGNTLSIPLVIYQRSNKNTCMHQKPRILQGKCVKKGQILADGAATVGGELALGKNLVVAY 659

Query: 361 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 420
           MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN
Sbjct: 660 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 719

Query: 421 LDKNGIVRLGSWVETG 436
           LDKNGIVRLGSWVETG
Sbjct: 720 LDKNGIVRLGSWVETG 735

[Close]

BLAST of Spo11874.1 vs. UniProtKB/TrEMBL
Match: A0A023ZPQ8_BETVU (DNA-directed RNA polymerase subunit beta OS=Beta vulgaris subsp. vulgaris GN=rpoB PE=3 SV=1)

HSP 1 Score: 837.4 bits (2162), Expect = 8.400e-240
Identity = 420/436 (96.33%), Postives = 426/436 (97.71%), Query Frame = 1


		  
Query: 1   MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 60
           MGTLDDMNHLK+KRIRSV DLLQDQFGLALVRLENVVRGTI GAIRHKLIPTPQNLVTST
Sbjct: 300 MGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTIGGAIRHKLIPTPQNLVTST 359

Query: 61  PLTT-FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYG 120
           PLTT FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR IHPSHYG
Sbjct: 360 PLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYG 419

Query: 121 RICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML 180
           RICPIDTSEGINVGLIGSLAIHA IGPWGSLESPYYEISER+KRVQMLYLSPSRDEYYML
Sbjct: 420 RICPIDTSEGINVGLIGSLAIHARIGPWGSLESPYYEISERAKRVQMLYLSPSRDEYYML 479

Query: 181 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHNDA 240
           ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIF+FQYFSIGASLIPFIEHNDA
Sbjct: 480 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFSFQYFSIGASLIPFIEHNDA 539

Query: 241 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVLLG 300
           NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVL IAEHEGKIIYTNT+KIVL G
Sbjct: 540 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLAIAEHEGKIIYTNTDKIVLSG 599

Query: 301 NGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLVAY 360
           NGNT+SIPLVMYQ SNKNTCMHQKPQI R KCVKKGQILA+GAATVGGELALGKNVLVAY
Sbjct: 600 NGNTLSIPLVMYQRSNKNTCMHQKPQISRDKCVKKGQILADGAATVGGELALGKNVLVAY 659

Query: 361 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 420
           MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN
Sbjct: 660 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 719

Query: 421 LDKNGIVRLGSWVETG 436
           LDKNGIVRLGSWVETG
Sbjct: 720 LDKNGIVRLGSWVETG 735

[Close]

BLAST of Spo11874.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K994_9CARY (DNA-directed RNA polymerase subunit beta OS=Haloxylon ammodendron GN=rpoB PE=3 SV=1)

HSP 1 Score: 830.5 bits (2144), Expect = 1.000e-237
Identity = 413/436 (94.72%), Postives = 426/436 (97.71%), Query Frame = 1


		  
Query: 1   MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 60
           MGTLDDMNHLK+KRIRSV DLLQDQFGLALVRLENVVRGTI GAIRHKLIPTPQNLVTST
Sbjct: 300 MGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTST 359

Query: 61  PLTT-FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYG 120
           PLTT FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR IHPSHYG
Sbjct: 360 PLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYG 419

Query: 121 RICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML 180
           RICPIDTSEGINVGLIGSLAIHA IGPWGSLESPYYEISERSKRVQ+LYLSPSRDEYYML
Sbjct: 420 RICPIDTSEGINVGLIGSLAIHARIGPWGSLESPYYEISERSKRVQILYLSPSRDEYYML 479

Query: 181 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHNDA 240
           ASGN LALNQGIQEEQVVPARYRQEFLT+AWEQVH RSIF+FQYFSIGASLIPFIEHNDA
Sbjct: 480 ASGNPLALNQGIQEEQVVPARYRQEFLTVAWEQVHLRSIFSFQYFSIGASLIPFIEHNDA 539

Query: 241 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVLLG 300
           NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVL IAEHEGKIIYTNT+KI+L G
Sbjct: 540 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLAIAEHEGKIIYTNTDKIILSG 599

Query: 301 NGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLVAY 360
           NGNT+SIPLVMYQ SNKNTCMHQKP+IP+G+CVKKGQILA+GAATVGGELALGKNVLVAY
Sbjct: 600 NGNTLSIPLVMYQRSNKNTCMHQKPRIPQGQCVKKGQILADGAATVGGELALGKNVLVAY 659

Query: 361 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 420
           MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEK+TSEIPHLEAHLLRN
Sbjct: 660 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKITSEIPHLEAHLLRN 719

Query: 421 LDKNGIVRLGSWVETG 436
           L+KNGIVRLGSWVETG
Sbjct: 720 LNKNGIVRLGSWVETG 735

[Close]

BLAST of Spo11874.1 vs. UniProtKB/TrEMBL
Match: A0A0K0K9F3_9CARY (DNA-directed RNA polymerase subunit beta OS=Haloxylon persicum GN=rpoB PE=3 SV=1)

HSP 1 Score: 830.5 bits (2144), Expect = 1.000e-237
Identity = 413/436 (94.72%), Postives = 426/436 (97.71%), Query Frame = 1


		  
Query: 1   MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 60
           MGTLDDMNHLK+KRIRSV DLLQDQFGLALVRLENVVRGTI GAIRHKLIPTPQNLVTST
Sbjct: 300 MGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTST 359

Query: 61  PLTT-FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYG 120
           PLTT FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR IHPSHYG
Sbjct: 360 PLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYG 419

Query: 121 RICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML 180
           RICPIDTSEGINVGLIGSLAIHA IGPWGSLESPYYEISERSKRVQ+LYLSPSRDEYYML
Sbjct: 420 RICPIDTSEGINVGLIGSLAIHARIGPWGSLESPYYEISERSKRVQILYLSPSRDEYYML 479

Query: 181 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHNDA 240
           ASGN LALNQGIQEEQVVPARYRQEFLT+AWEQVH RSIF+FQYFSIGASLIPFIEHNDA
Sbjct: 480 ASGNPLALNQGIQEEQVVPARYRQEFLTVAWEQVHLRSIFSFQYFSIGASLIPFIEHNDA 539

Query: 241 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVLLG 300
           NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVL IAEHEGKIIYTNT+KI+L G
Sbjct: 540 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLAIAEHEGKIIYTNTDKIILSG 599

Query: 301 NGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLVAY 360
           NGNT+SIPLVMYQ SNKNTCMHQKP+IP+G+CVKKGQILA+GAATVGGELALGKNVLVAY
Sbjct: 600 NGNTLSIPLVMYQRSNKNTCMHQKPRIPQGQCVKKGQILADGAATVGGELALGKNVLVAY 659

Query: 361 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 420
           MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEK+TSEIPHLEAHLLRN
Sbjct: 660 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKITSEIPHLEAHLLRN 719

Query: 421 LDKNGIVRLGSWVETG 436
           L+KNGIVRLGSWVETG
Sbjct: 720 LNKNGIVRLGSWVETG 735

[Close]

BLAST of Spo11874.1 vs. UniProtKB/TrEMBL
Match: A0A159ZR82_9CARY (RNA polymerase beta subunit OS=Bienertia sinuspersici GN=rpoB PE=4 SV=1)

HSP 1 Score: 825.1 bits (2130), Expect = 4.300e-236
Identity = 413/436 (94.72%), Postives = 425/436 (97.48%), Query Frame = 1


		  
Query: 1   MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 60
           MGTLDDMNHLK+KRIRSV DLLQDQFGLALVRLEN VRGTI GAIRHKLIPTPQNLVTST
Sbjct: 300 MGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIRHKLIPTPQNLVTST 359

Query: 61  PLTT-FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYG 120
           PLTT FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR IHPSHYG
Sbjct: 360 PLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYG 419

Query: 121 RICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML 180
           RICPIDTSEGINVGLIGSLAIHA IGP GSLESPYYEISERSKRVQMLYLSPSRDEYYML
Sbjct: 420 RICPIDTSEGINVGLIGSLAIHARIGPLGSLESPYYEISERSKRVQMLYLSPSRDEYYML 479

Query: 181 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHNDA 240
           ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIF+FQYFSIGASLIPFIEHNDA
Sbjct: 480 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFSFQYFSIGASLIPFIEHNDA 539

Query: 241 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVLLG 300
           NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVL I+EHEGKIIYTNT+KI+L G
Sbjct: 540 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLAISEHEGKIIYTNTDKILLSG 599

Query: 301 NGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLVAY 360
           NGNT+SIPLV+YQ SNKNTCMHQKP+IP+GKCVKKGQILA+GAATVGGELALGKNVLVAY
Sbjct: 600 NGNTLSIPLVIYQRSNKNTCMHQKPRIPQGKCVKKGQILADGAATVGGELALGKNVLVAY 659

Query: 361 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 420
           MPWEGYNFEDAVLISERLVYE+I+TSFHIRKYEIQTYVTSQGPEKVT EIPHLEAHLLRN
Sbjct: 660 MPWEGYNFEDAVLISERLVYENIFTSFHIRKYEIQTYVTSQGPEKVTREIPHLEAHLLRN 719

Query: 421 LDKNGIVRLGSWVETG 436
           LDKNGIVRLGSWVETG
Sbjct: 720 LDKNGIVRLGSWVETG 735

[Close]

BLAST of Spo11874.1 vs. UniProtKB/TrEMBL
Match: A0A0G2QY03_9CARY (DNA-directed RNA polymerase subunit beta OS=Salicornia brachiata GN=rpoB PE=3 SV=1)

HSP 1 Score: 824.3 bits (2128), Expect = 7.300e-236
Identity = 412/436 (94.50%), Postives = 425/436 (97.48%), Query Frame = 1


		  
Query: 1   MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 60
           MGTLDDMNHLK+KRIRSV DLLQDQFGLALVRLEN VRGTI GAIRHKLIPTPQNLVTST
Sbjct: 300 MGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTIGGAIRHKLIPTPQNLVTST 359

Query: 61  PLTT-FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYG 120
           PLTT FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR IHPSHYG
Sbjct: 360 PLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYG 419

Query: 121 RICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML 180
           RICPIDTSEGINVGLIGSLAIHA IG WGSLESPYYEISERSKRVQMLYLSPS+DEYYML
Sbjct: 420 RICPIDTSEGINVGLIGSLAIHARIGLWGSLESPYYEISERSKRVQMLYLSPSKDEYYML 479

Query: 181 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHNDA 240
           ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIF+FQYFSIGASLIPFIEHNDA
Sbjct: 480 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFSFQYFSIGASLIPFIEHNDA 539

Query: 241 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVLLG 300
           NRALMSSNMQRQAVPLS+SEKCIVGTGLERQVALDSGVL IAEHEGKIIYTNT+KI+L G
Sbjct: 540 NRALMSSNMQRQAVPLSKSEKCIVGTGLERQVALDSGVLAIAEHEGKIIYTNTDKILLSG 599

Query: 301 NGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLVAY 360
           NGNT+SIPLV+YQ SNKNTCMHQKP+I +GKCVKKGQILA+GAATVGGELALGKN++VAY
Sbjct: 600 NGNTLSIPLVIYQRSNKNTCMHQKPRILQGKCVKKGQILADGAATVGGELALGKNLVVAY 659

Query: 361 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 420
           MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN
Sbjct: 660 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 719

Query: 421 LDKNGIVRLGSWVETG 436
           LDKNGIVRLGSWVETG
Sbjct: 720 LDKNGIVRLGSWVETG 735

[Close]

BLAST of Spo11874.1 vs. ExPASy Swiss-Prot
Match: RPOB_SPIOL (DNA-directed RNA polymerase subunit beta OS=Spinacia oleracea GN=rpoB PE=3 SV=1)

HSP 1 Score: 852.0 bits (2200), Expect = 2.900e-246
Identity = 427/436 (97.94%), Postives = 430/436 (98.62%), Query Frame = 1


		  
Query: 1   MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 60
           MGTLDDMNHLKHKRIRSV DLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST
Sbjct: 300 MGTLDDMNHLKHKRIRSVADLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 359

Query: 61  PLTT-FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYG 120
           PLTT FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR IHPSHYG
Sbjct: 360 PLTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYG 419

Query: 121 RICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML 180
           RICPIDTSEGINVGLIGSLAIHA IGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML
Sbjct: 420 RICPIDTSEGINVGLIGSLAIHARIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML 479

Query: 181 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHNDA 240
           ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIF+FQYFSIGASLIPFIEHNDA
Sbjct: 480 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFSFQYFSIGASLIPFIEHNDA 539

Query: 241 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVLLG 300
           NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVL IAEHEGKIIYTNT+KIVLLG
Sbjct: 540 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLAIAEHEGKIIYTNTDKIVLLG 599

Query: 301 NGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLVAY 360
           NGNTVSIPLVMYQ SNKNTCMHQKPQIPRGKCVKKGQILA+GAATVGGELALGKNVLVAY
Sbjct: 600 NGNTVSIPLVMYQRSNKNTCMHQKPQIPRGKCVKKGQILADGAATVGGELALGKNVLVAY 659

Query: 361 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 420
           MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN
Sbjct: 660 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 719

Query: 421 LDKNGIVRLGSWVETG 436
           LDKNGIVRLGSWVETG
Sbjct: 720 LDKNGIVRLGSWVETG 735

[Close]

BLAST of Spo11874.1 vs. ExPASy Swiss-Prot
Match: RPOB_PANGI (DNA-directed RNA polymerase subunit beta OS=Panax ginseng GN=rpoB PE=3 SV=1)

HSP 1 Score: 802.0 bits (2070), Expect = 3.500e-231
Identity = 396/436 (90.83%), Postives = 419/436 (96.10%), Query Frame = 1


		  
Query: 1   MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 60
           MGTLDDMNHLK+KRIRSV DLLQDQFGLALVRLENVVRGTI GA+RHKLIPTPQNLVTST
Sbjct: 301 MGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTICGALRHKLIPTPQNLVTST 360

Query: 61  PLTT-FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYG 120
           PLTT +ESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR IHPSHYG
Sbjct: 361 PLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYG 420

Query: 121 RICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML 180
           RICPIDTSEGINVGLIGSLAIHA IG WGSLESP+YEISERSK  +MLYLSP +DEYYM+
Sbjct: 421 RICPIDTSEGINVGLIGSLAIHARIGRWGSLESPFYEISERSKGARMLYLSPGKDEYYMV 480

Query: 181 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHNDA 240
           A+GNSLALNQGIQEEQVVPARYRQEFLTIAWEQVH RSIF+FQYFSIGASLIPFIEHNDA
Sbjct: 481 AAGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHLRSIFSFQYFSIGASLIPFIEHNDA 540

Query: 241 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVLLG 300
           NRALMSSNMQRQAVPLS+SEKCIVGTGLERQ A+DSG L IAEHEGKIIYT+T+KI+L G
Sbjct: 541 NRALMSSNMQRQAVPLSRSEKCIVGTGLERQAAIDSGALAIAEHEGKIIYTDTDKILLSG 600

Query: 301 NGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLVAY 360
           NGNT+SIPLV+YQ SNKNTCMHQKPQ+ RGKC+KKGQILA+GAATVGGELALGKNVLVAY
Sbjct: 601 NGNTLSIPLVIYQRSNKNTCMHQKPQVQRGKCIKKGQILAHGAATVGGELALGKNVLVAY 660

Query: 361 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 420
           MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEI+T+VTSQGPE+VT+EIPHLEAHLLRN
Sbjct: 661 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIKTHVTSQGPERVTNEIPHLEAHLLRN 720

Query: 421 LDKNGIVRLGSWVETG 436
           LDKNGIV LGSWVETG
Sbjct: 721 LDKNGIVMLGSWVETG 736

[Close]

BLAST of Spo11874.1 vs. ExPASy Swiss-Prot
Match: RPOB_EUCGG (DNA-directed RNA polymerase subunit beta OS=Eucalyptus globulus subsp. globulus GN=rpoB PE=3 SV=1)

HSP 1 Score: 797.7 bits (2059), Expect = 6.600e-230
Identity = 398/438 (90.87%), Postives = 420/438 (95.89%), Query Frame = 1


		  
Query: 1   MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 60
           MGTLDDMNHLK+KRIRSV DLLQDQFGLALVRLENVV+GTI GAIRHKLIPTPQNLVTST
Sbjct: 300 MGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVKGTICGAIRHKLIPTPQNLVTST 359

Query: 61  PLTT-FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYG 120
           PLTT +ESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR IHPSHYG
Sbjct: 360 PLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYG 419

Query: 121 RICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERS--KRVQMLYLSPSRDEYY 180
           RICPIDTSEGINVGLIGSLAIHA IG  GSLESP+YEISERS  K+V+MLYLSPSRDEYY
Sbjct: 420 RICPIDTSEGINVGLIGSLAIHARIGQGGSLESPFYEISERSKSKKVRMLYLSPSRDEYY 479

Query: 181 MLASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHN 240
           M+A+GNSLALNQ IQEEQVVPARYRQEFLTIAWEQV+ RSIF FQYFSIGASLIPFIEHN
Sbjct: 480 MIAAGNSLALNQRIQEEQVVPARYRQEFLTIAWEQVNLRSIFPFQYFSIGASLIPFIEHN 539

Query: 241 DANRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVL 300
           DANRALMSSNMQRQAVPLS+SEKCIVGTGLERQ ALDSGV  IAEHEGKIIYTNT+KI+L
Sbjct: 540 DANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVTAIAEHEGKIIYTNTDKIIL 599

Query: 301 LGNGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLV 360
           LGNG+T+SIPLVMYQ SNKNTCMHQKPQ+PRGKC+KKGQILA+GAATVGGELALGKNVLV
Sbjct: 600 LGNGDTLSIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADGAATVGGELALGKNVLV 659

Query: 361 AYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLL 420
           AY+PWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQT+VTSQGPE++T+EIPHLEAHLL
Sbjct: 660 AYLPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITNEIPHLEAHLL 719

Query: 421 RNLDKNGIVRLGSWVETG 436
           RNLDKNGIV LGSWVE G
Sbjct: 720 RNLDKNGIVMLGSWVEAG 737

[Close]

BLAST of Spo11874.1 vs. ExPASy Swiss-Prot
Match: RPOB_SILLA (DNA-directed RNA polymerase subunit beta OS=Silene latifolia GN=rpoB PE=3 SV=1)

HSP 1 Score: 796.6 bits (2056), Expect = 1.500e-229
Identity = 396/436 (90.83%), Postives = 416/436 (95.41%), Query Frame = 1


		  
Query: 1   MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 60
           MGTLDDMNHLK+KRIRSV DLLQDQFGLALVRLENVVRGTI GAIRHKLIPTPQNLVTST
Sbjct: 300 MGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTST 359

Query: 61  PLTT-FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYG 120
           PLTT +ESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIR IHPSHYG
Sbjct: 360 PLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYG 419

Query: 121 RICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML 180
           RICPIDTSEGINVGLIGSLAIHA IG  GSLESP+Y+ISERS  VQML+LSPS DEYYM+
Sbjct: 420 RICPIDTSEGINVGLIGSLAIHARIGLLGSLESPFYKISERSAMVQMLFLSPSIDEYYMV 479

Query: 181 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHNDA 240
           ++GNSLALNQGIQEEQVVPARYRQEFLTIAWEQVH RSIF FQYFSIGASLIPFIEHNDA
Sbjct: 480 STGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDA 539

Query: 241 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVLLG 300
           NRALMSSNMQRQAVPLSQSEKCIVGTGLERQ ALDSG+L IAEHEGKI+YT+T+KI+  G
Sbjct: 540 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQAALDSGILAIAEHEGKILYTDTDKIIFSG 599

Query: 301 NGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLVAY 360
           NG+  SIPLVMYQ SNKNTCMHQ P+IPRGKC+KKGQILA+GAATVGGELALGKN+LVAY
Sbjct: 600 NGDIQSIPLVMYQRSNKNTCMHQNPRIPRGKCIKKGQILADGAATVGGELALGKNILVAY 659

Query: 361 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 420
           MPWEGYNFEDAVLISERLVYEDIYTSFHIRKY+IQTYVTSQGPE+VTSEIPHLEAHLLRN
Sbjct: 660 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYDIQTYVTSQGPERVTSEIPHLEAHLLRN 719

Query: 421 LDKNGIVRLGSWVETG 436
           LDKNGIVRLGSWVETG
Sbjct: 720 LDKNGIVRLGSWVETG 735

[Close]

BLAST of Spo11874.1 vs. ExPASy Swiss-Prot
Match: RPOB_LIRTU (DNA-directed RNA polymerase subunit beta OS=Liriodendron tulipifera GN=rpoB PE=3 SV=2)

HSP 1 Score: 792.3 bits (2045), Expect = 2.800e-228
Identity = 392/436 (89.91%), Postives = 414/436 (94.95%), Query Frame = 1


		  
Query: 1   MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 60
           MGTLDDMNHLK+KRIRSV DLLQDQFGLALVRLEN VRGTI GAIRHKLIPTPQNLVTST
Sbjct: 300 MGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIRHKLIPTPQNLVTST 359

Query: 61  PLTT-FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYG 120
           PLTT +ESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGLTGRTASFRIR IHPSHYG
Sbjct: 360 PLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHPSHYG 419

Query: 121 RICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYML 180
           RICPIDTSEGINVGLIGSLAIHA IG WGS+ESP+YEISERSK VQM+YLSPSRDEYYM+
Sbjct: 420 RICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERSKEVQMVYLSPSRDEYYMV 479

Query: 181 ASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHNDA 240
           A+GNSLALN GIQEEQVVPARYRQEFLTIAWEQ+H RSIF FQYFSIGASLIPFIEHNDA
Sbjct: 480 AAGNSLALNWGIQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDA 539

Query: 241 NRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVLLG 300
           NRALMSSNMQRQAVPLS+SEKCIVGTGLE Q ALDSGV  IAEHEGKI+YT+T+KIVL G
Sbjct: 540 NRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIAEHEGKIVYTDTDKIVLSG 599

Query: 301 NGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLVAY 360
           NG+T+SIPLVMYQ SNKNTCMHQKPQ+ RGKC+KKGQILA+GAATVGGELALGKNVLVAY
Sbjct: 600 NGDTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADGAATVGGELALGKNVLVAY 659

Query: 361 MPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRN 420
           MPWEGYN EDAVLISERLVY DIYTSFHIRKYEIQT+VTSQGPE++T+EIPHLEAHLLRN
Sbjct: 660 MPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQGPERITNEIPHLEAHLLRN 719

Query: 421 LDKNGIVRLGSWVETG 436
           LDKNGIV LGSW+ETG
Sbjct: 720 LDKNGIVMLGSWIETG 735

[Close]

BLAST of Spo11874.1 vs. TAIR (Arabidopsis)
Match: ATCG00190.1 (RNA polymerase subunit beta)

HSP 1 Score: 774.6 bits (1999), Expect = 3.400e-224
Identity = 382/438 (87.21%), Postives = 412/438 (94.06%), Query Frame = 1


		  
Query: 1   MGTLDDMNHLKHKRIRSVTDLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTST 60
           MGTLDDMNHLK+KRIRSV DLLQDQ GLAL RLENVV+GTISGAIRHKLIPTPQNLVTST
Sbjct: 300 MGTLDDMNHLKNKRIRSVADLLQDQLGLALARLENVVKGTISGAIRHKLIPTPQNLVTST 359

Query: 61  PLTT-FESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRYIHPSHYG 120
           PLTT +ESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTA+FRIR IHPSHYG
Sbjct: 360 PLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTANFRIRDIHPSHYG 419

Query: 121 RICPIDTSEGINVGLIGSLAIHASIGPWGSLESPYYEISERSK--RVQMLYLSPSRDEYY 180
           RICPIDTSEGINVGLIGSL+IHA IG WGSLESP+YE+ E+SK  R++ML+LSPS+DEYY
Sbjct: 420 RICPIDTSEGINVGLIGSLSIHARIGDWGSLESPFYELFEKSKKARIRMLFLSPSQDEYY 479

Query: 181 MLASGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFTFQYFSIGASLIPFIEHN 240
           M+A+GNSLALN+GIQEEQ VPARYRQEFLTIAWE+VH RSIF FQYFSIGASLIPFIEHN
Sbjct: 480 MIAAGNSLALNRGIQEEQAVPARYRQEFLTIAWEEVHLRSIFPFQYFSIGASLIPFIEHN 539

Query: 241 DANRALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLTIAEHEGKIIYTNTNKIVL 300
           DANRALMSSNMQRQAVPLS+SEKCIVGTGLERQVALDSGV  IAEHEGKI+YT+T KIV 
Sbjct: 540 DANRALMSSNMQRQAVPLSRSEKCIVGTGLERQVALDSGVPAIAEHEGKILYTDTEKIVF 599

Query: 301 LGNGNTVSIPLVMYQCSNKNTCMHQKPQIPRGKCVKKGQILANGAATVGGELALGKNVLV 360
            GNG+T+SIPL+MYQ SNKNTCMHQKPQ+ RGKC+KKGQILA+GAATVGGELALGKN+LV
Sbjct: 600 SGNGDTLSIPLIMYQRSNKNTCMHQKPQVRRGKCIKKGQILADGAATVGGELALGKNILV 659

Query: 361 AYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLL 420
           AYMPWEGYNFEDAVLISE LVY DIYTSFHIRKYEIQT+VT+QGPE++T EIPHLE  LL
Sbjct: 660 AYMPWEGYNFEDAVLISECLVYGDIYTSFHIRKYEIQTHVTTQGPERITKEIPHLEGRLL 719

Query: 421 RNLDKNGIVRLGSWVETG 436
           RNLDKNGIV LGSWVETG
Sbjct: 720 RNLDKNGIVMLGSWVETG 737

The following BLAST results are available for this feature:

BLAST of Spo11874.1 vs. NCBI nr
BLAST of Spo11874.1 vs. UniProtKB/TrEMBL
BLAST of Spo11874.1 vs. ExPASy Swiss-Prot
BLAST of Spo11874.1 vs. TAIR (Arabidopsis)

BLAST of Spo11874.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|11497516\|ref\|NP_054924.1\|	4.7e-244	97.9	RNA polymerase beta subunit [S...	[more]
gi\|628819100\|gb\|AHY80533.1\|	1.2e-239	96.3	RNA polymerase beta subunit (p...	[more]
gi\|910354309\|ref\|YP_009160794.1\|	1.5e-237	94.7	RNA polymerase beta subunit (c...	[more]
gi\|1020267076\|gb\|AMZ03427.1\|	6.2e-236	94.7	RNA polymerase beta subunit (c...	[more]
gi\|836613822\|ref\|YP_009143631.1\|	1.1e-235	94.5	RNA polymerase beta subunit (c...	[more]

BLAST of Spo11874.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A023ZPQ8_BETVU	8.4e-240	96.3	DNA-directed RNA polymerase su...	[more]
A0A0K0K994_9CARY	1.0e-237	94.7	DNA-directed RNA polymerase su...	[more]
A0A0K0K9F3_9CARY	1.0e-237	94.7	DNA-directed RNA polymerase su...	[more]
A0A159ZR82_9CARY	4.3e-236	94.7	RNA polymerase beta subunit OS...	[more]
A0A0G2QY03_9CARY	7.3e-236	94.5	DNA-directed RNA polymerase su...	[more]

BLAST of Spo11874.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RPOB_SPIOL	2.9e-246	97.9	DNA-directed RNA polymerase su...	[more]
RPOB_PANGI	3.5e-231	90.8	DNA-directed RNA polymerase su...	[more]
RPOB_EUCGG	6.6e-230	90.8	DNA-directed RNA polymerase su...	[more]
RPOB_SILLA	1.5e-229	90.8	DNA-directed RNA polymerase su...	[more]
RPOB_LIRTU	2.8e-228	89.9	DNA-directed RNA polymerase su...	[more]

BLAST of Spo11874.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
ATCG00190.1	3.4e-224	87.2	RNA polymerase subunit beta	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007120	DNA-directed RNA polymerase, subunit 2, domain 6	GENE3D	2.40.270.10		coord: 349..381 score: 1.6
IPR007120	DNA-directed RNA polymerase, subunit 2, domain 6	PFAM	PF00562	RNA_pol_Rpb2_6	coord: 281..435 score: 1.1
IPR007645	RNA polymerase Rpb2, domain 3	PFAM	PF04565	RNA_pol_Rpb2_3	coord: 76..144 score: 3.8
IPR014724	RNA polymerase Rpb2, OB-fold	GENE3D	2.40.50.150		coord: 382..435 score: 4.5
IPR015712	DNA-directed RNA polymerase, subunit 2	PANTHER	PTHR20856	DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2	coord: 1..288 score: 4.9E-224coord: 304..435 score: 4.9E
None	No IPR available	GENE3D	2.40.50.100		coord: 278..348 score: 2.2
None	No IPR available	GENE3D	3.90.1100.10		coord: 222..276 score: 1.7E-82coord: 5..155 score: 1.7
None	No IPR available	PANTHER	PTHR20856:SF20	DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA	coord: 1..288 score: 4.9E-224coord: 304..435 score: 4.9E
None	No IPR available	unknown	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase	coord: 2..436 score: 8.85E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0032549	ribonucleoside binding