Spo11989.1 (mRNA) | SpinachBase

Overview


Name	Spo11989.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Thump domain protein, putative
Location	chr4 : 7495548 .. 7500416 (-)
Sequence length	1705

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGTTCCATGTATTGGGTTTGTTTTAGCACGACCCAAAACCAATTTAAAACGATGCGTTTATAATTTAGACTCTAAAATCCAATTGAAGCAGTTTTCCCAAAACCCTCTTCTTTCATTTCTCCCCCCCTTTTACCTTCTTCACTCAACTTCCCTTTCAATGGGTGCTGAAAATCAAGCAAAATCTGCAACCACCAACGACCCCAAGAAGCGCAAACGATCTTACTTACCCCACAACGTAAAATCCCCATTTCCCCAATTTCATTCTCTTGATTTTAACTCTCTTTTTTAATTAATAACTGTTCTAATTTTGTTCTTTTGATTTTTTGTGGGGTTTTTGTGTTTTTTAATCAGAAACCAGTGAAGAAGAAGGGGTATAACCCATTAAGACCAGGATTCCAAGGGTTCTTCATAACCTGTGATGGTGGAAGAGAACACCAAGCTTCTCAGGAAGCCATCAATGTCATTGATACTGTATGTATTCCTTTTTGTTTATTTTTTTTCTTTGGTTTATAGATTCAGGAAGGTTTTTTAATTTAGTTTAATTAAGCAAGAACAGATTTTTAGCACCCTAATTGTTGAAGCTTAAATTTTTATGTCCTCCATTTTGTTAATTTTGTTAATTTAGCTCTCTGCAAATAATTTTATGGTTTTATTTTGTATGATTTGTTGATGGGGTTTTATTTGAACTTGCAAATTACAATCTTGGTGGGTGTAATTACAATCTTAGCTCTGCAAATAATTTTATGGTTTTATTTTGTATGATTTGTTGATGGGGTTTGATTTGAACTTGCAAATTACAATCTTGGTGGGTGTGGTTCAATTTTGATTTGTGCTTAGATATATTTATTAAGTGATTAACTGGTTGGATTAGTGAGCCTTACTAGCTGAGTAACTGGTCATGGGTACTAGTCTAAGTTGGGCTGATTTTCGGCGATCTTTATTGTTGGTTTGAACTTGAAAGGTTTCAGGCTAGTGATATACTAGCGAGCTTCAAAGAGTTATTAGTGTATTTTAGGCTGAAAGAATGATGATGGAAATAACGTGTTAGGGAATTTTCTTTAAATAGAACAATTGTTTTAAAATTGTCCATTTCCGATGGAGCCAAAGATTCATTTATTCTTTTGGCTGTGGGATGTAATGGACTAAATCAAAATGGCTCTTAAAACCTCTTTGCTTTCTTTCCATGAAGTAGAAGATGGTCGTCCCGTTGTTGTCTCATTATCGCTTTTGGGTCAATTGGAAACAACCTCTCTGAAATTGCAGGGGTAAGGTTGCGTACACCCGACCCCCCCCCTACCCCGCTTCTTATGGGAGCCTCTTTGAGGCAATGGGGTAATGATAATGAACAATTGTTTTAAAACTGAGGAAAGGAGAGTGATGAAAAGAGGGGGGAAAACAGCAAAGAGAGCTTGTCAAACTGTCGAAAAGAGTAACTGGTTGAATATTTGTGAACCGAGTGTTTGAGAAATATTGAGTAGGTATGGGTTCTGAATCTTCTGATCATGCTTAATGTGGACCTTTTTTATCTATGCTACCTATAATGGGTATTAATTTAAAGAACTTAAGTCGTATGCTTGCAGCGTTGCATGAAGAGGTTAGACTGTTAGAGCAATAGACTGGGCATTTCTCATTGGTTTGACACTTTGACTGGTCCAAACTCAGTATTCTAAGTATAAAATTTTAAAATAAAAATCCATCACGAGGTTTCCCTACAAACACAGTTTCCAAGCACTACAATTGTTTCTTAGGGTAGACAACTGCTCTAATTGTCAAGGAAGAAATGTGTTGGGATATTTCTAAAAGTCATTTTACAAGAATCAAGGAAGTGTTGGACACAAGAACACTATTAATGAGAGTTTGTCAACTGCCAAAAAAATTATGGTTAAACTAACAGACAACAGATCATAAATTGTACAGGAAAAATTGCAAAGCAGCTGTTTCATATTGGACCTTAATTGGCACATACACAGACACTCACATACTGTTCGATATTTGAAATTTATCAAGTCTTGCTTGCTTCTTGTTCTTTGTACTTCCATTTATGCATAAAAATGCACAAAAACAAGAAGTAACTGGAGTGTCTTATGTCCTCAATACTTAAATGTTTATATACTTAAAAGTAGCTGCATCTTTTCTGGTTTTTTTTTCTTTTTCCTTTTTGATCCTGAAGAGTACTATCTTGGTTTTGTTTTAGATTTTAGAAGAGCTGATCGATGGCAAGGATTCAGATTCTAACCCGGCCGCGAAACCAGAGAAACCTGCGAACAAAAAAATAAAGTTTACTTACTCTGATTCTTCTGATAATGACGAAGATGATGACGAGAATGAGAAAGATAACCAGTCAGAAAAAGTTGCAGAAGAGGGTACAAATAATGGAAGTTCGGTGGAAGAAAATACTGATCCTGCTAAGAAGGATGATCAGTTGGTTGAGATTGGATCTGGACAAGTTGCTGGCGATGTTGGGGAAGTTGCTAAACTAGCTGATGAAGATAAAAGCAAGGAGAAGGAGGAGTTGCATGGTGTTGGATCTGGACAAGTTGCTGGTGATGATGAAGAAGTTGCTAAACTAGAAGATGGAAAGAGCAAGGAGAATGAAGAACCACTAGAAAAGAAACAGTGTTGTGATACCAAGAAGTTAGAAAGCAATCATCAAAATGCAGAGATGTCTGTTGATAGGNACAGTGTTGTGATACCAAGAAGTTAGAAAGCAATCATCAAAATGCAGAGATGTCTGTTGATAGGTTAATTGAAGCTGAACTCAAAGAATTAGGAGATAAGAGCAAGGTGAGTTANCCCCCCCCCCCCCCCCCCCCCCCCCCCCCAAGTCCCAACCGCTTCTGTAAAGCTAAATATTTTAAATATGTTTCTATCAAATTTGTATTTGAAGCAACAAAATTTATGTTGAACCAGCGGCGTTTCTCCAAGATTGATACTGGCTGTAATGGTGTTGTCATTGTCCAAATGCGTAAAAGGGATGGAGACCCTAGCCCTGGAGAAATTGGACAGCATCTGATGGAATCTGCTTCAAGAACAAAGAAGCATATGTCAAGGTTCAACTTTAGGGGTTTTTTTATATATATAAATAACATCATTATTTAACAAGCAAATGAGTAGTTTTTTTGTTGTGAAATTCACTAAGATTTTCATTTTTATAGGTTTCTTCTGAGAGTGCTACCAGTAGAAGTCTCGTGCTATTCTTCTGAAGAGGAAATCTCTAGAGCTATCAAGCCACTTATTGAACAATACTTCCCTGTCAACAGTGGAACACCGGTTAAGGTACTTCCCCATATATGCTTCAAATACAGTATTATGTGCAGGCTGATTTCAGTTTGGTAGGGTGTAAAATGTTTTCATGCAAAACGATTTTCCTCTTTTCAATCATTTTACGTTGTTTGGTTTGGCAAGGGATGGAAAACAAATTTCAATAACTCCCCACAAAGGTAGAAAAACATTTTCCATTTGAAAGGACGGGAAAACCACTTTTCCATCTTTCCTCCTTACCTTCATCTTCCTTCTTCCCATCAATATTCACCCATTTTCTCCCATTTTCCTCTTTTCTATTAATTTTCTTGTAAGGAACCAAACAAAGTAAAACTAGTTTGGAATTGTGTTATTCCTTGAAAAAGGTTTTCCATGGAAAATCATTTTTCACTAAAACATTTTACGCCAAACCAAACGGAGCCTAGGAGCCAATGTTATGCATGTTGAACTTCACAAACAATGCCAGCTTACTGATGGCGTGACTTCTTCTTCGTCGTGTATTCGAATGTAGATGAACTGTGGGTTTTTAACTATGGAGTAATTGACATGGGAATATACCTATCTGCAAATTTTTTTAGCTAGAAAGTTGAAATTGGTGCTTCTTAGAGTTCCATCAACTTTAATAATGATGTTCTTGTGGACCTCTTATAAATCAGATAACTGATTTGTTTTGGATTCTTTTCTTCAGTTTGCTGTTCAATACGATGCACGTGCCAATTCTGGCATCGAGAGGATGAAGATAATAGACGCTGTTGCGAAATCTGTTCCTGAACCACACAAAGTAGATCTCAAAAATCCAGACAAGACTATAATTGTCCAAATTGTCAAGGTACATAAAGAATATGTTATTTGTTCTAGTCTATATCTATATATTATACTATAGCGCAGTTTTTTTCCTTTTATTCATATTTTAATTTAATGTTTTTTTAGAAATTAAGTGCAACCACTCATTTATGTTTCTTGGAAACAATAATGATTTCAAAATATTTAATGCAGAGTAAATTACGAAGTGACTCCCTTTTTTTTTAATTACATCTAAATACAACTCCTTTTTGAGTTGTTGGCATTGAAAATTAATATTATTAACTAATGTCCGCTTTGAAATTATCCATTACCACTCATATTAATGTAACATTTGAATCACTAATTGTTATTTTTTCTAATGAAACCGTGCATTACTAGTTCTTTCCTTAAATCCTCCTGATTCTTATTTTTCGACTTTGCTTTCTGCAGACCGTGTGCTTGATTGGTGTCGTAGAGAAATACAAAGAGCTGTCGAAGTTTAACTTGAGGCAACTCACTTCACCTTAGCTCGAGATTTGACTTTGGACAAGAAGAACAAAGACAATTGTAGACAATTGTGGATACAATAATCTCTTTGTCACCCTTTTTGTATCATTATATTTGTTTTATTGTGTGTTTGTTAAGTTTAGGATGATATTAATTTGAGTCTTGAATTAGATACAAGTACAAATCTGTATTAGCTTGAATTTCAGATAGTTCATCATTTTTAACAGTTCAGATACTGGCGCTTGAATCTTAAGTTGAAAACCTAGATTTCTGCTGAATACTTACATGGCCTTTACATGGCCTCTGAAGGCTCCAC

mRNA sequence

CACGTTCCATGTATTGGGTTTGTTTTAGCACGACCCAAAACCAATTTAAAACGATGCGTTTATAATTTAGACTCTAAAATCCAATTGAAGCAGTTTTCCCAAAACCCTCTTCTTTCATTTCTCCCCCCCTTTTACCTTCTTCACTCAACTTCCCTTTCAATGGGTGCTGAAAATCAAGCAAAATCTGCAACCACCAACGACCCCAAGAAGCGCAAACGATCTTACTTACCCCACAACAAACCAGTGAAGAAGAAGGGGTATAACCCATTAAGACCAGGATTCCAAGGGTTCTTCATAACCTGTGATGGTGGAAGAGAACACCAAGCTTCTCAGGAAGCCATCAATGTCATTGATACTATTCAGGAAGAAGAGCTGATCGATGGCAAGGATTCAGATTCTAACCCGGCCGCGAAACCAGAGAAACCTGCGAACAAAAAAATAAAGTTTACTTACTCTGATTCTTCTGATAATGACGAAGATGATGACGAGAATGAGAAAGATAACCAGTCAGAAAAAGTTGCAGAAGAGGGTACAAATAATGGAAGTTCGGTGGAAGAAAATACTGATCCTGCTAAGAAGGATGATCAGTTGGTTGAGATTGGATCTGGACAAGTTGCTGGCGATGTTGGGGAAGTTGCTAAACTAGCTGATGAAGATAAAAGCAAGGAGAAGGAGGAGTTGCATGGTGTTGGATCTGGACAAGTTGCTGGTGATGATGAAGAAGTTGCTAAACTAGAAGATGGAAAGAGCAAGGAGAATGAAGAACCACTAGAAAAGAAACAGTGTTGTGATACCAAGAAGTTAGAAAGCAATCATCAAAATGCAGAGATGTCTTGTTGTGATACCAAGAAGTTAGAAAGCAATCATCAAAATGCAGAGATGTCTGTTGATAGGTTAATTGAAGCTGAACTCAAAGAATTAGGAGATAAGAGCAAGCGGCGTTTCTCCAAGATTGATACTGGCTGTAATGGTGTTGTCATTGTCCAAATGCGTAAAAGGGATGGAGACCCTAGCCCTGGAGAAATTGGACAGCATCTGATGGAATCTGCTTCAAGAACAAAGAAGCATATGTCAAGGTTTCTTCTGAGAGTGCTACCAGTAGAAGTCTCGTGCTATTCTTCTGAAGAGGAAATCTCTAGAGCTATCAAGCCACTTATTGAACAATACTTCCCTGTCAACAGTGGAACACCGTTTGCTGTTCAATACGATGCACGTGCCAATTCTGGCATCGAGAGGATGAAGATAATAGACGCTGTTGCGAAATCTGTTCCTGAACCACACAAAGTAGATCTCAAAAATCCAGACAAGACTATAATTGTCCAAATTGTCAAGACCGTGTGCTTGATTGGTGTCGTAGAGAAATACAAAGAGCTGTCGAAGTTTAACTTGAGGCAACTCACTTCACCTTAGCTCGAGATTTGACTTTGGACAAGAAGAACAAAGACAATTGTAGACAATTGTGGATACAATAATCTCTTTGTCACCCTTTTTGTATCATTATATTTGTTTTATTGTGTGTTTGTTAAGTTTAGGATGATATTAATTTGAGTCTTGAATTAGATACAAGTACAAATCTGTATTAGCTTGAATTTCAGATAGTTCATCATTTTTAACAGTTCAGATACTGGCGCTTGAATCTTAAGTTGAAAACCTAGATTTCTGCTGAATACTTACATGGCCTTTACATGGCCTCTGAAGGCTCCAC

Coding sequence (CDS)

ATGGGTGCTGAAAATCAAGCAAAATCTGCAACCACCAACGACCCCAAGAAGCGCAAACGATCTTACTTACCCCACAACAAACCAGTGAAGAAGAAGGGGTATAACCCATTAAGACCAGGATTCCAAGGGTTCTTCATAACCTGTGATGGTGGAAGAGAACACCAAGCTTCTCAGGAAGCCATCAATGTCATTGATACTATTCAGGAAGAAGAGCTGATCGATGGCAAGGATTCAGATTCTAACCCGGCCGCGAAACCAGAGAAACCTGCGAACAAAAAAATAAAGTTTACTTACTCTGATTCTTCTGATAATGACGAAGATGATGACGAGAATGAGAAAGATAACCAGTCAGAAAAAGTTGCAGAAGAGGGTACAAATAATGGAAGTTCGGTGGAAGAAAATACTGATCCTGCTAAGAAGGATGATCAGTTGGTTGAGATTGGATCTGGACAAGTTGCTGGCGATGTTGGGGAAGTTGCTAAACTAGCTGATGAAGATAAAAGCAAGGAGAAGGAGGAGTTGCATGGTGTTGGATCTGGACAAGTTGCTGGTGATGATGAAGAAGTTGCTAAACTAGAAGATGGAAAGAGCAAGGAGAATGAAGAACCACTAGAAAAGAAACAGTGTTGTGATACCAAGAAGTTAGAAAGCAATCATCAAAATGCAGAGATGTCTTGTTGTGATACCAAGAAGTTAGAAAGCAATCATCAAAATGCAGAGATGTCTGTTGATAGGTTAATTGAAGCTGAACTCAAAGAATTAGGAGATAAGAGCAAGCGGCGTTTCTCCAAGATTGATACTGGCTGTAATGGTGTTGTCATTGTCCAAATGCGTAAAAGGGATGGAGACCCTAGCCCTGGAGAAATTGGACAGCATCTGATGGAATCTGCTTCAAGAACAAAGAAGCATATGTCAAGGTTTCTTCTGAGAGTGCTACCAGTAGAAGTCTCGTGCTATTCTTCTGAAGAGGAAATCTCTAGAGCTATCAAGCCACTTATTGAACAATACTTCCCTGTCAACAGTGGAACACCGTTTGCTGTTCAATACGATGCACGTGCCAATTCTGGCATCGAGAGGATGAAGATAATAGACGCTGTTGCGAAATCTGTTCCTGAACCACACAAAGTAGATCTCAAAAATCCAGACAAGACTATAATTGTCCAAATTGTCAAGACCGTGTGCTTGATTGGTGTCGTAGAGAAATACAAAGAGCTGTCGAAGTTTAACTTGAGGCAACTCACTTCACCTTAG

Protein sequence

MGAENQAKSATTNDPKKRKRSYLPHNKPVKKKGYNPLRPGFQGFFITCDGGREHQASQEAINVIDTIQEEELIDGKDSDSNPAAKPEKPANKKIKFTYSDSSDNDEDDDENEKDNQSEKVAEEGTNNGSSVEENTDPAKKDDQLVEIGSGQVAGDVGEVAKLADEDKSKEKEELHGVGSGQVAGDDEEVAKLEDGKSKENEEPLEKKQCCDTKKLESNHQNAEMSCCDTKKLESNHQNAEMSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHLMESASRTKKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTPFAVQYDARANSGIERMKIIDAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLRQLTSP

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo11989	Spo11989	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo11989.1	Spo11989.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11989.1.utr5p.1	Spo11989.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11989.1.CDS.9	Spo11989.1.CDS.9	CDS
Spo11989.1.CDS.8	Spo11989.1.CDS.8	CDS
Spo11989.1.CDS.7	Spo11989.1.CDS.7	CDS
Spo11989.1.CDS.6	Spo11989.1.CDS.6	CDS
Spo11989.1.CDS.5	Spo11989.1.CDS.5	CDS
Spo11989.1.CDS.4	Spo11989.1.CDS.4	CDS
Spo11989.1.CDS.3	Spo11989.1.CDS.3	CDS
Spo11989.1.CDS.2	Spo11989.1.CDS.2	CDS
Spo11989.1.CDS.1	Spo11989.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11989.1.utr3p.1	Spo11989.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo11989.1.exon.9	Spo11989.1.exon.9	exon
Spo11989.1.exon.8	Spo11989.1.exon.8	exon
Spo11989.1.exon.7	Spo11989.1.exon.7	exon
Spo11989.1.exon.6	Spo11989.1.exon.6	exon
Spo11989.1.exon.5	Spo11989.1.exon.5	exon
Spo11989.1.exon.4	Spo11989.1.exon.4	exon
Spo11989.1.exon.3	Spo11989.1.exon.3	exon
Spo11989.1.exon.2	Spo11989.1.exon.2	exon
Spo11989.1.exon.1	Spo11989.1.exon.1	exon

Homology

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BLAST of Spo11989.1 vs. NCBI nr
Match: gi|902232421|gb|KNA22616.1| (hypothetical protein SOVF_031070 [Spinacia oleracea])

HSP 1 Score: 740.3 bits (1910), Expect = 1.800e-210
Identity = 397/418 (94.98%), Postives = 397/418 (94.98%), Query Frame = 1


		  
Query: 1   MGAENQAKSATTNDPKKRKRSYLPHNKPVKKKGYNPLRPGFQGFFITCDGGREHQASQEA 60
           MGAENQAKSATTNDPKKRKRSYLPHNKPVKKKGYNPLRPGFQGFFITCDGGREHQASQEA
Sbjct: 1   MGAENQAKSATTNDPKKRKRSYLPHNKPVKKKGYNPLRPGFQGFFITCDGGREHQASQEA 60

Query: 61  INVIDTIQEEELIDGKDSDSNPAAKPEKPANKKIKFTYSDSSDNDEDDDENEKDNQSEKV 120
           INVIDTI EE LIDGKDSDSNPAAKPEKPANKKIKFTYSDSSDNDEDDDENEKDNQSEKV
Sbjct: 61  INVIDTILEE-LIDGKDSDSNPAAKPEKPANKKIKFTYSDSSDNDEDDDENEKDNQSEKV 120

Query: 121 AEEGTNNGSSVEENTDPAKKDDQLVEIGSGQVAGDVGEVAKLADEDKSKEKEELHGVGSG 180
           AEEGTNNGSSVEENTDPAKKDDQLVEIGSGQVAGDVGEVAKLADEDKSKEKEELHGVGSG
Sbjct: 121 AEEGTNNGSSVEENTDPAKKDDQLVEIGSGQVAGDVGEVAKLADEDKSKEKEELHGVGSG 180

Query: 181 QVAGDDEEVAKLEDGKSKENEEPLEKKQCCDTKKLESNHQNAEMSCCDTKKLESNHQNAE 240
           QVAGDDEEVAKLEDGKSKENEEPLEKKQCCDT                 KKLESNHQNAE
Sbjct: 181 QVAGDDEEVAKLEDGKSKENEEPLEKKQCCDT-----------------KKLESNHQNAE 240

Query: 241 MSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHLMESASRT 300
           MSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHLMESASRT
Sbjct: 241 MSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHLMESASRT 300

Query: 301 KKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTP--FAVQYDARANSGIE 360
           KKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTP  FAVQYDARANSGIE
Sbjct: 301 KKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTPVKFAVQYDARANSGIE 360

Query: 361 RMKIIDAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLRQLTSP 417
           RMKIIDAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLRQLTSP
Sbjct: 361 RMKIIDAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLRQLTSP 400

[Close]

BLAST of Spo11989.1 vs. NCBI nr
Match: gi|731325828|ref|XP_010673711.1| (PREDICTED: uncharacterized protein LOC104890051 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 482.3 bits (1240), Expect = 8.800e-133
Identity = 281/424 (66.27%), Postives = 321/424 (75.71%), Query Frame = 1


		  
Query: 1   MGAENQAKSATTNDPKKRKRSYLPHNKPVKKKGYNPLRPGFQGFFITCDGGREHQASQEA 60
           M AEN+AK+AT     KRKR YLPHNK V+KKG  PL+PG QGFFITCDGGREHQA+ EA
Sbjct: 1   MAAENEAKTATN----KRKRGYLPHNKSVRKKGPCPLKPGIQGFFITCDGGREHQATHEA 60

Query: 61  INVIDTIQEEELIDGKDSDSNP----AAKPEKPANKKIKFTYSDSSDNDEDDD---ENEK 120
           I+VID   EE LI GKDS  N     ++ PEK  NKKIKF+YSDSSDNDEDD+   EN K
Sbjct: 61  IDVIDNFFEE-LIHGKDSRVNTKTTASSIPEKALNKKIKFSYSDSSDNDEDDENDAENGK 120

Query: 121 DNQSEKVAEEGTNNGSSVEENTDPAKKDDQLVEIGSGQVAGDVGEVAKLADEDKSKEKEE 180
           +NQSEKVAE+  +NGS+VEE + PAK D+QL E                           
Sbjct: 121 ENQSEKVAED-VDNGSTVEEKSVPAKTDEQLNE--------------------------- 180

Query: 181 LHGVGSGQVAGDDEEVAKLEDGKSKENEEPLEKKQCCDTKKLESNHQNAEMSCCDTKKLE 240
              V S + AGDDEE ++   GKSKENEEPLEKKQ                 CCDT+KLE
Sbjct: 181 ---VESDKAAGDDEENSEQVVGKSKENEEPLEKKQ-----------------CCDTQKLE 240

Query: 241 SNHQNAEMSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHL 300
           S + + EMSVD+LIEAELKELGDKSKRRFSKIDTGCNGVVI+QMR+RDGDP+PG+I QH+
Sbjct: 241 SKNPSPEMSVDKLIEAELKELGDKSKRRFSKIDTGCNGVVIIQMRRRDGDPNPGDIVQHM 300

Query: 301 MESASRTKKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTP--FAVQYDA 360
           MESAS TKKHMSRFLLRVLPVE+SCY+SEE+I RAIKPL+EQYFPV++  P  FAVQYDA
Sbjct: 301 MESASATKKHMSRFLLRVLPVEISCYASEEDIKRAIKPLVEQYFPVDAEAPIKFAVQYDA 360

Query: 361 RANSGIERMKIIDAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLR 416
           RAN+GIERMKIIDAVAKS+P  HKVDLKNP+KTIIVQ+VKTVCLIGVVEKYKEL+K+NLR
Sbjct: 361 RANTGIERMKIIDAVAKSIPGTHKVDLKNPEKTIIVQVVKTVCLIGVVEKYKELAKYNLR 371

[Close]

BLAST of Spo11989.1 vs. NCBI nr
Match: gi|225436571|ref|XP_002278600.1| (PREDICTED: THUMP domain-containing protein 1 isoform X1 [Vitis vinifera])

HSP 1 Score: 392.5 bits (1007), Expect = 9.200e-106
Identity = 232/423 (54.85%), Postives = 292/423 (69.03%), Query Frame = 1


		  
Query: 1   MGAENQAK-SATTNDPKKRKRSYLPHNKPVKKKGYNPLRPGFQGFFITCDGGREHQASQE 60
           M  EN+A  +  T   KKRK+ YLPHNKPVKKKG  PL PG QGFFITCDGGRE QAS+E
Sbjct: 1   MATENKANPNPNTTKNKKRKQRYLPHNKPVKKKGGYPLHPGVQGFFITCDGGRERQASRE 60

Query: 61  AINVIDTIQEEELIDGKDSDSNPAAKPEKPANKKIKFTYSDSSDNDEDDDENEKDNQSEK 120
           A+NVID+  EE L+ GKDS    +  P KP NKKIKF+YSDS  +D+DDD ++++++S+ 
Sbjct: 61  ALNVIDSFFEE-LVHGKDSGVKLSMLPNKPMNKKIKFSYSDSGSDDDDDDIDDEEDKSDL 120

Query: 121 VAEEGTNNGSSVEENTDPAKKDDQLVEIGSGQVAGDVGEVAKLADEDKSKEKEELHGVGS 180
             E+  N+ +   E + P K DD   E  + + A D     K  D ++++E +       
Sbjct: 121 HREKDANDENPSNEKSHPQKNDDVCRENQNKEKADD-----KTQDGNENQEND------- 180

Query: 181 GQVAGDDEEVAK-LEDGKSKEN---EEPLEKKQCCDTKKLESNHQNAEMSCCDTKKLESN 240
                D E+  K  EDG   +    EEP  KKQC +T               D      +
Sbjct: 181 ----ADGEKADKNTEDGNENQEVDAEEPSAKKQCLET---------------DASTHIIH 240

Query: 241 HQNAEMSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHLME 300
            +  E S+D+LIEAEL+ELGD++KRRF  +D+GCNGVV VQMRK+DGDPSP EI QH+M 
Sbjct: 241 EKTEEKSIDKLIEAELQELGDRNKRRFGNLDSGCNGVVFVQMRKKDGDPSPKEIVQHMMT 300

Query: 301 SASRTKKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTP--FAVQYDARA 360
           SA+ T+KHMSRF+LRVLPVE +CY+SEEEIS AIKPL+EQYFPV +  P  FAV Y+AR+
Sbjct: 301 SAASTRKHMSRFILRVLPVEATCYASEEEISIAIKPLVEQYFPVETQNPKKFAVLYEARS 360

Query: 361 NSGIERMKIIDAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLRQL 417
           N+GI+RMKII++VAKSVP PHKVDL NPD TI+VQIVKTVCLIG +EKYKEL+K+NLRQL
Sbjct: 361 NTGIDRMKIINSVAKSVPGPHKVDLSNPDMTIVVQIVKTVCLIGFLEKYKELAKYNLRQL 391

[Close]

BLAST of Spo11989.1 vs. NCBI nr
Match: gi|802765015|ref|XP_012090052.1| (PREDICTED: THUMP domain-containing protein 1 isoform X1 [Jatropha curcas])

HSP 1 Score: 388.3 bits (996), Expect = 1.700e-104
Identity = 233/424 (54.95%), Postives = 292/424 (68.87%), Query Frame = 1


		  
Query: 1   MGAENQAKSATT---NDPKKRKRSYLPHNKPVKKKGYNPLRPGFQGFFITCDGGREHQAS 60
           M   N  KSA T   N  KKRK+ YLPHNKPVKKKG  PL PG QGFFITCDGGRE QAS
Sbjct: 1   MATVNNPKSAATANVNKGKKRKQRYLPHNKPVKKKGAYPLHPGVQGFFITCDGGRERQAS 60

Query: 61  QEAINVIDTIQEEELIDGKDSDSNPAAKPEKPANKKIKFTYSDSSDNDEDDDENEKDNQS 120
            EAINVID+  EE L+ GKD+  + A  P KP NKKIKF YSD  D +E+D+E++ +N+ 
Sbjct: 61  HEAINVIDSFYEE-LVHGKDTSVDLAELPNKPLNKKIKFVYSDDDDEEEEDEEDDDNNEV 120

Query: 121 EKVAEEG--TNNGSSVEENTDPAKKDDQLVEIGSGQVAGDVGEVAKLADEDKSKEKEELH 180
           E+  EEG    N S V +N+D   +     ++    V    G   +   E+K+K+ E+  
Sbjct: 121 EEQDEEGGEEENKSDVNQNSDAKSEVPTNEKLSFPNVENTCGANQR---EEKTKDSED-- 180

Query: 181 GVGSGQVAGDDEEVAKLEDGKSKENEEPLEKKQCCDTKKLESN-HQNAEMSCCDTKKLES 240
                  +G+D E        + E +EP  KKQC DT   +S  H+  E           
Sbjct: 181 -------SGNDLE------NPTSEAKEPPAKKQCLDTCVSKSTIHEKME----------- 240

Query: 241 NHQNAEMSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHLM 300
                E SVD+LIE ELKELGDKSKRRF+ +D+GCNGVV VQMRKRDGDPSP +I QH+M
Sbjct: 241 -----EKSVDKLIEDELKELGDKSKRRFANLDSGCNGVVFVQMRKRDGDPSPKDIVQHMM 300

Query: 301 ESASRTKKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTP--FAVQYDAR 360
             A+ T+KHMSRF+LRVLPVEV+CY+SEEEIS+A+  ++ +YFPV++  P  FAV Y+AR
Sbjct: 301 TFAASTRKHMSRFILRVLPVEVACYASEEEISKAMASIVAKYFPVDAQDPQKFAVLYEAR 360

Query: 361 ANSGIERMKIIDAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLRQ 417
           AN+GI+RMKII++VAKSVP PHKVDL NP+KTI+V++VKTVCLIGVVEKYKEL+K+N+RQ
Sbjct: 361 ANTGIDRMKIINSVAKSVPGPHKVDLSNPEKTIVVEVVKTVCLIGVVEKYKELAKYNMRQ 389

[Close]

BLAST of Spo11989.1 vs. NCBI nr
Match: gi|590584338|ref|XP_007015151.1| (THUMP domain-containing protein 1 isoform 2 [Theobroma cacao])

HSP 1 Score: 385.2 bits (988), Expect = 1.500e-103
Identity = 229/418 (54.78%), Postives = 278/418 (66.51%), Query Frame = 1


		  
Query: 1   MGAENQAKSATTNDPKKRKRSYLPHNKPVKKKGYNPLRPGFQGFFITCDGGREHQASQEA 60
           M  EN+ K  T     K+++ YLPHNK VKKKG  PLRPG QGFFITCDGGRE QA+ EA
Sbjct: 1   MAIENKGKPNTATTKGKKRKQYLPHNKAVKKKGAYPLRPGVQGFFITCDGGRERQAAHEA 60

Query: 61  INVIDTIQEEELIDGKDSDSNPAAKPEKPANKKIKFTYSDSSDNDEDDDENEKDNQSEKV 120
           INVIDT  EE L+ GKD    PA  P KP NKKI F+YSD  D D+ D+E   D   EK 
Sbjct: 61  INVIDTFFEE-LVHGKDLGEEPARLPNKPLNKKITFSYSD--DEDDVDEEEGDDEGEEKE 120

Query: 121 AEEGTNNGSSVEENTDPAKKDDQLVEIGSGQVAGDVGEVAKLADEDKSKEKEELHGVGSG 180
             E T +  S E +    +  ++                    D D     +  HG  + 
Sbjct: 121 QNEVTKSDISRENDASQERLTNK--------------------DLDHYNLDDVCHGKATE 180

Query: 181 QVAGDDEEVAKLEDGKSKENEEPLEKKQCCDTKKLESNHQNAEMSCCDTKKLESNHQNAE 240
           +  G  E+   +E+ ++    EP  KKQC +T               DT K E+N +  E
Sbjct: 181 ETKGTKEDGVNIEN-QADNFMEPPAKKQCRET---------------DTSKCETNGK--E 240

Query: 241 MSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHLMESASRT 300
            S+D+LIEAELKELGDKSKRRF  +D+GCNGVV VQMRK++GDP P +I QH+M SA+ T
Sbjct: 241 KSIDKLIEAELKELGDKSKRRFINLDSGCNGVVFVQMRKKEGDPGPKDIAQHMMTSAAST 300

Query: 301 KKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTP--FAVQYDARANSGIE 360
           +KHMSRF+LRVLPVEV+CY+SEEEI+RAIKPLI QYFPV +  P  FAV Y+ARANSGI+
Sbjct: 301 RKHMSRFILRVLPVEVACYASEEEITRAIKPLIAQYFPVETQNPWKFAVLYEARANSGID 360

Query: 361 RMKIIDAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLRQLTSP 417
           RMKII++VAKS+P PHKVDL NPD TI+V+I+KTVCLIGVVEKYKEL+KFNLRQLTSP
Sbjct: 361 RMKIINSVAKSIPAPHKVDLSNPDMTIVVEIIKTVCLIGVVEKYKELAKFNLRQLTSP 377

[Close]

BLAST of Spo11989.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RSW1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_031070 PE=4 SV=1)

HSP 1 Score: 740.3 bits (1910), Expect = 1.200e-210
Identity = 397/418 (94.98%), Postives = 397/418 (94.98%), Query Frame = 1


		  
Query: 1   MGAENQAKSATTNDPKKRKRSYLPHNKPVKKKGYNPLRPGFQGFFITCDGGREHQASQEA 60
           MGAENQAKSATTNDPKKRKRSYLPHNKPVKKKGYNPLRPGFQGFFITCDGGREHQASQEA
Sbjct: 1   MGAENQAKSATTNDPKKRKRSYLPHNKPVKKKGYNPLRPGFQGFFITCDGGREHQASQEA 60

Query: 61  INVIDTIQEEELIDGKDSDSNPAAKPEKPANKKIKFTYSDSSDNDEDDDENEKDNQSEKV 120
           INVIDTI EE LIDGKDSDSNPAAKPEKPANKKIKFTYSDSSDNDEDDDENEKDNQSEKV
Sbjct: 61  INVIDTILEE-LIDGKDSDSNPAAKPEKPANKKIKFTYSDSSDNDEDDDENEKDNQSEKV 120

Query: 121 AEEGTNNGSSVEENTDPAKKDDQLVEIGSGQVAGDVGEVAKLADEDKSKEKEELHGVGSG 180
           AEEGTNNGSSVEENTDPAKKDDQLVEIGSGQVAGDVGEVAKLADEDKSKEKEELHGVGSG
Sbjct: 121 AEEGTNNGSSVEENTDPAKKDDQLVEIGSGQVAGDVGEVAKLADEDKSKEKEELHGVGSG 180

Query: 181 QVAGDDEEVAKLEDGKSKENEEPLEKKQCCDTKKLESNHQNAEMSCCDTKKLESNHQNAE 240
           QVAGDDEEVAKLEDGKSKENEEPLEKKQCCDT                 KKLESNHQNAE
Sbjct: 181 QVAGDDEEVAKLEDGKSKENEEPLEKKQCCDT-----------------KKLESNHQNAE 240

Query: 241 MSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHLMESASRT 300
           MSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHLMESASRT
Sbjct: 241 MSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHLMESASRT 300

Query: 301 KKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTP--FAVQYDARANSGIE 360
           KKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTP  FAVQYDARANSGIE
Sbjct: 301 KKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTPVKFAVQYDARANSGIE 360

Query: 361 RMKIIDAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLRQLTSP 417
           RMKIIDAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLRQLTSP
Sbjct: 361 RMKIIDAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLRQLTSP 400

[Close]

BLAST of Spo11989.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CRC9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g073340 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 6.100e-133
Identity = 281/424 (66.27%), Postives = 321/424 (75.71%), Query Frame = 1


		  
Query: 1   MGAENQAKSATTNDPKKRKRSYLPHNKPVKKKGYNPLRPGFQGFFITCDGGREHQASQEA 60
           M AEN+AK+AT     KRKR YLPHNK V+KKG  PL+PG QGFFITCDGGREHQA+ EA
Sbjct: 1   MAAENEAKTATN----KRKRGYLPHNKSVRKKGPCPLKPGIQGFFITCDGGREHQATHEA 60

Query: 61  INVIDTIQEEELIDGKDSDSNP----AAKPEKPANKKIKFTYSDSSDNDEDDD---ENEK 120
           I+VID   EE LI GKDS  N     ++ PEK  NKKIKF+YSDSSDNDEDD+   EN K
Sbjct: 61  IDVIDNFFEE-LIHGKDSRVNTKTTASSIPEKALNKKIKFSYSDSSDNDEDDENDAENGK 120

Query: 121 DNQSEKVAEEGTNNGSSVEENTDPAKKDDQLVEIGSGQVAGDVGEVAKLADEDKSKEKEE 180
           +NQSEKVAE+  +NGS+VEE + PAK D+QL E                           
Sbjct: 121 ENQSEKVAED-VDNGSTVEEKSVPAKTDEQLNE--------------------------- 180

Query: 181 LHGVGSGQVAGDDEEVAKLEDGKSKENEEPLEKKQCCDTKKLESNHQNAEMSCCDTKKLE 240
              V S + AGDDEE ++   GKSKENEEPLEKKQ                 CCDT+KLE
Sbjct: 181 ---VESDKAAGDDEENSEQVVGKSKENEEPLEKKQ-----------------CCDTQKLE 240

Query: 241 SNHQNAEMSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHL 300
           S + + EMSVD+LIEAELKELGDKSKRRFSKIDTGCNGVVI+QMR+RDGDP+PG+I QH+
Sbjct: 241 SKNPSPEMSVDKLIEAELKELGDKSKRRFSKIDTGCNGVVIIQMRRRDGDPNPGDIVQHM 300

Query: 301 MESASRTKKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTP--FAVQYDA 360
           MESAS TKKHMSRFLLRVLPVE+SCY+SEE+I RAIKPL+EQYFPV++  P  FAVQYDA
Sbjct: 301 MESASATKKHMSRFLLRVLPVEISCYASEEDIKRAIKPLVEQYFPVDAEAPIKFAVQYDA 360

Query: 361 RANSGIERMKIIDAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLR 416
           RAN+GIERMKIIDAVAKS+P  HKVDLKNP+KTIIVQ+VKTVCLIGVVEKYKEL+K+NLR
Sbjct: 361 RANTGIERMKIIDAVAKSIPGTHKVDLKNPEKTIIVQVVKTVCLIGVVEKYKELAKYNLR 371

[Close]

BLAST of Spo11989.1 vs. UniProtKB/TrEMBL
Match: D7SNG3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00060 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 6.400e-106
Identity = 232/423 (54.85%), Postives = 292/423 (69.03%), Query Frame = 1


		  
Query: 1   MGAENQAK-SATTNDPKKRKRSYLPHNKPVKKKGYNPLRPGFQGFFITCDGGREHQASQE 60
           M  EN+A  +  T   KKRK+ YLPHNKPVKKKG  PL PG QGFFITCDGGRE QAS+E
Sbjct: 1   MATENKANPNPNTTKNKKRKQRYLPHNKPVKKKGGYPLHPGVQGFFITCDGGRERQASRE 60

Query: 61  AINVIDTIQEEELIDGKDSDSNPAAKPEKPANKKIKFTYSDSSDNDEDDDENEKDNQSEK 120
           A+NVID+  EE L+ GKDS    +  P KP NKKIKF+YSDS  +D+DDD ++++++S+ 
Sbjct: 61  ALNVIDSFFEE-LVHGKDSGVKLSMLPNKPMNKKIKFSYSDSGSDDDDDDIDDEEDKSDL 120

Query: 121 VAEEGTNNGSSVEENTDPAKKDDQLVEIGSGQVAGDVGEVAKLADEDKSKEKEELHGVGS 180
             E+  N+ +   E + P K DD   E  + + A D     K  D ++++E +       
Sbjct: 121 HREKDANDENPSNEKSHPQKNDDVCRENQNKEKADD-----KTQDGNENQEND------- 180

Query: 181 GQVAGDDEEVAK-LEDGKSKEN---EEPLEKKQCCDTKKLESNHQNAEMSCCDTKKLESN 240
                D E+  K  EDG   +    EEP  KKQC +T               D      +
Sbjct: 181 ----ADGEKADKNTEDGNENQEVDAEEPSAKKQCLET---------------DASTHIIH 240

Query: 241 HQNAEMSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHLME 300
            +  E S+D+LIEAEL+ELGD++KRRF  +D+GCNGVV VQMRK+DGDPSP EI QH+M 
Sbjct: 241 EKTEEKSIDKLIEAELQELGDRNKRRFGNLDSGCNGVVFVQMRKKDGDPSPKEIVQHMMT 300

Query: 301 SASRTKKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTP--FAVQYDARA 360
           SA+ T+KHMSRF+LRVLPVE +CY+SEEEIS AIKPL+EQYFPV +  P  FAV Y+AR+
Sbjct: 301 SAASTRKHMSRFILRVLPVEATCYASEEEISIAIKPLVEQYFPVETQNPKKFAVLYEARS 360

Query: 361 NSGIERMKIIDAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLRQL 417
           N+GI+RMKII++VAKSVP PHKVDL NPD TI+VQIVKTVCLIG +EKYKEL+K+NLRQL
Sbjct: 361 NTGIDRMKIINSVAKSVPGPHKVDLSNPDMTIVVQIVKTVCLIGFLEKYKELAKYNLRQL 391

[Close]

BLAST of Spo11989.1 vs. UniProtKB/TrEMBL
Match: A0A067JRH7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25960 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.200e-104
Identity = 233/424 (54.95%), Postives = 292/424 (68.87%), Query Frame = 1


		  
Query: 1   MGAENQAKSATT---NDPKKRKRSYLPHNKPVKKKGYNPLRPGFQGFFITCDGGREHQAS 60
           M   N  KSA T   N  KKRK+ YLPHNKPVKKKG  PL PG QGFFITCDGGRE QAS
Sbjct: 1   MATVNNPKSAATANVNKGKKRKQRYLPHNKPVKKKGAYPLHPGVQGFFITCDGGRERQAS 60

Query: 61  QEAINVIDTIQEEELIDGKDSDSNPAAKPEKPANKKIKFTYSDSSDNDEDDDENEKDNQS 120
            EAINVID+  EE L+ GKD+  + A  P KP NKKIKF YSD  D +E+D+E++ +N+ 
Sbjct: 61  HEAINVIDSFYEE-LVHGKDTSVDLAELPNKPLNKKIKFVYSDDDDEEEEDEEDDDNNEV 120

Query: 121 EKVAEEG--TNNGSSVEENTDPAKKDDQLVEIGSGQVAGDVGEVAKLADEDKSKEKEELH 180
           E+  EEG    N S V +N+D   +     ++    V    G   +   E+K+K+ E+  
Sbjct: 121 EEQDEEGGEEENKSDVNQNSDAKSEVPTNEKLSFPNVENTCGANQR---EEKTKDSED-- 180

Query: 181 GVGSGQVAGDDEEVAKLEDGKSKENEEPLEKKQCCDTKKLESN-HQNAEMSCCDTKKLES 240
                  +G+D E        + E +EP  KKQC DT   +S  H+  E           
Sbjct: 181 -------SGNDLE------NPTSEAKEPPAKKQCLDTCVSKSTIHEKME----------- 240

Query: 241 NHQNAEMSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHLM 300
                E SVD+LIE ELKELGDKSKRRF+ +D+GCNGVV VQMRKRDGDPSP +I QH+M
Sbjct: 241 -----EKSVDKLIEDELKELGDKSKRRFANLDSGCNGVVFVQMRKRDGDPSPKDIVQHMM 300

Query: 301 ESASRTKKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTP--FAVQYDAR 360
             A+ T+KHMSRF+LRVLPVEV+CY+SEEEIS+A+  ++ +YFPV++  P  FAV Y+AR
Sbjct: 301 TFAASTRKHMSRFILRVLPVEVACYASEEEISKAMASIVAKYFPVDAQDPQKFAVLYEAR 360

Query: 361 ANSGIERMKIIDAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLRQ 417
           AN+GI+RMKII++VAKSVP PHKVDL NP+KTI+V++VKTVCLIGVVEKYKEL+K+N+RQ
Sbjct: 361 ANTGIDRMKIINSVAKSVPGPHKVDLSNPEKTIVVEVVKTVCLIGVVEKYKELAKYNMRQ 389

[Close]

BLAST of Spo11989.1 vs. UniProtKB/TrEMBL
Match: A0A061GSG5_THECC (THUMP domain-containing protein 1 isoform 2 OS=Theobroma cacao GN=TCM_040796 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.000e-103
Identity = 229/418 (54.78%), Postives = 278/418 (66.51%), Query Frame = 1


		  
Query: 1   MGAENQAKSATTNDPKKRKRSYLPHNKPVKKKGYNPLRPGFQGFFITCDGGREHQASQEA 60
           M  EN+ K  T     K+++ YLPHNK VKKKG  PLRPG QGFFITCDGGRE QA+ EA
Sbjct: 1   MAIENKGKPNTATTKGKKRKQYLPHNKAVKKKGAYPLRPGVQGFFITCDGGRERQAAHEA 60

Query: 61  INVIDTIQEEELIDGKDSDSNPAAKPEKPANKKIKFTYSDSSDNDEDDDENEKDNQSEKV 120
           INVIDT  EE L+ GKD    PA  P KP NKKI F+YSD  D D+ D+E   D   EK 
Sbjct: 61  INVIDTFFEE-LVHGKDLGEEPARLPNKPLNKKITFSYSD--DEDDVDEEEGDDEGEEKE 120

Query: 121 AEEGTNNGSSVEENTDPAKKDDQLVEIGSGQVAGDVGEVAKLADEDKSKEKEELHGVGSG 180
             E T +  S E +    +  ++                    D D     +  HG  + 
Sbjct: 121 QNEVTKSDISRENDASQERLTNK--------------------DLDHYNLDDVCHGKATE 180

Query: 181 QVAGDDEEVAKLEDGKSKENEEPLEKKQCCDTKKLESNHQNAEMSCCDTKKLESNHQNAE 240
           +  G  E+   +E+ ++    EP  KKQC +T               DT K E+N +  E
Sbjct: 181 ETKGTKEDGVNIEN-QADNFMEPPAKKQCRET---------------DTSKCETNGK--E 240

Query: 241 MSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHLMESASRT 300
            S+D+LIEAELKELGDKSKRRF  +D+GCNGVV VQMRK++GDP P +I QH+M SA+ T
Sbjct: 241 KSIDKLIEAELKELGDKSKRRFINLDSGCNGVVFVQMRKKEGDPGPKDIAQHMMTSAAST 300

Query: 301 KKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTP--FAVQYDARANSGIE 360
           +KHMSRF+LRVLPVEV+CY+SEEEI+RAIKPLI QYFPV +  P  FAV Y+ARANSGI+
Sbjct: 301 RKHMSRFILRVLPVEVACYASEEEITRAIKPLIAQYFPVETQNPWKFAVLYEARANSGID 360

Query: 361 RMKIIDAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLRQLTSP 417
           RMKII++VAKS+P PHKVDL NPD TI+V+I+KTVCLIGVVEKYKEL+KFNLRQLTSP
Sbjct: 361 RMKIINSVAKSIPAPHKVDLSNPDMTIVVEIIKTVCLIGVVEKYKELAKFNLRQLTSP 377

[Close]

BLAST of Spo11989.1 vs. ExPASy Swiss-Prot
Match: THUM1_DROME (THUMP domain-containing protein 1 homolog OS=Drosophila melanogaster GN=CG15014 PE=1 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 1.200e-20
Identity = 57/171 (33.33%), Postives = 100/171 (58.48%), Query Frame = 1


		  
Query: 249 AELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHLMESASRTKKHMSRFL 308
           A+ +E+  + K RF  +DT     V ++ +  D    P  +G+H++   + T K MSRF+
Sbjct: 111 AKCREMLSQRKMRFQNVDTNTTNCVFIRTQLED----PVALGKHIINDIATTGKSMSRFV 170

Query: 309 LRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTPFAVQYDARANSGIERMKIIDAVAK 368
           LR++P+EV C ++  +I  A   L +++F +   T + + ++ R N  I+R +II  +A+
Sbjct: 171 LRLVPIEVVCRANMPDIITAAGELFDKHF-LKEPTSYGIIFNHRYNQQIKRDQIITQLAE 230

Query: 369 SVPEPH---KVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLRQLTSP 417
            V   +   KVDLK   K+IIV++++  CL+ V++ Y E  KFNL +L +P
Sbjct: 231 LVNSKNVGNKVDLKEAKKSIIVEVLRGWCLLSVIDNYLECKKFNLAELANP 276

[Close]

BLAST of Spo11989.1 vs. ExPASy Swiss-Prot
Match: THUM1_MOUSE (THUMP domain-containing protein 1 OS=Mus musculus GN=Thumpd1 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.900e-19
Identity = 54/184 (29.35%), Postives = 104/184 (56.52%), Query Frame = 1


		  
Query: 233 ESNHQNAEMSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQH 292
           E    +AE ++ + +  ++K   +K  RRF  +++G N VV +    R     P ++  H
Sbjct: 89  EGEDDDAEAALKKEV-GDIKASTEKRLRRFQSVESGANNVVFI----RTLGIEPEKLVHH 148

Query: 293 LMESASRTKKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTPFAVQYDAR 352
           +++   +TKK  +R +LR+LP+  +C +  E++ +  +  +E +F   +   F + Y +R
Sbjct: 149 ILQDMYKTKKKKTRVILRMLPISGTCKAFLEDMKKYAETFLEPWFKAPNKGTFQIVYKSR 208

Query: 353 ANSGIERMKIIDAVA---KSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFN 412
            NS + R ++I  +A    S+   +KVDL NP+ T++V+I+K VC + VV+ Y    K+N
Sbjct: 209 NNSHMNREEVIKELAGIVGSLNSENKVDLTNPEYTVVVEIIKAVCCLSVVKDYVLFRKYN 267

Query: 413 LRQL 414
           L+++
Sbjct: 269 LQEV 267

[Close]

BLAST of Spo11989.1 vs. ExPASy Swiss-Prot
Match: THUM1_BOVIN (THUMP domain-containing protein 1 OS=Bos taurus GN=THUMPD1 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 8.500e-19
Identity = 56/177 (31.64%), Postives = 99/177 (55.93%), Query Frame = 1


		  
Query: 247 IEAELK-ELGDKSK------RRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHLMESASR 306
           +EA LK E+GD         RRF  +++G N VV +    R     P ++  H+++   +
Sbjct: 95  VEAALKKEVGDIKASTEMRLRRFQSVESGANNVVFI----RTLGIEPEKLVHHILQDIYK 154

Query: 307 TKKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTPFAVQYDARANSGIER 366
           TKK  +R +LR+LP+  +C +  E++ +  +  +E +F   +   F + Y +R NS + R
Sbjct: 155 TKKKKTRVILRMLPISGTCKAFLEDMKKYAETFLEPWFKAPNKGTFQIVYKSRNNSHMNR 214

Query: 367 MKIIDAVA---KSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLRQL 414
            ++I  +A    S+   +KVDL NP  T++V+I+K VC + VV+ Y    K+NL+++
Sbjct: 215 EEVIKELAGIVGSLNSENKVDLSNPQYTVVVEIIKAVCCLSVVKDYMLFRKYNLQEV 267

[Close]

BLAST of Spo11989.1 vs. ExPASy Swiss-Prot
Match: THUM1_HUMAN (THUMP domain-containing protein 1 OS=Homo sapiens GN=THUMPD1 PE=1 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 3.200e-18
Identity = 52/184 (28.26%), Postives = 102/184 (55.43%), Query Frame = 1


		  
Query: 233 ESNHQNAEMSVDRLIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQH 292
           E    +AE ++ + +  ++K   +   RRF  +++G N VV +    R     P ++  H
Sbjct: 89  EGEDDDAEAALKKEV-GDIKASTEMRLRRFQSVESGANNVVFI----RTLGIEPEKLVHH 148

Query: 293 LMESASRTKKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTPFAVQYDAR 352
           +++   +TKK  +R +LR+LP+  +C +  E++ +  +  +E +F   +   F + Y +R
Sbjct: 149 ILQDMYKTKKKKTRVILRMLPISGTCKAFLEDMKKYAETFLEPWFKAPNKGTFQIVYKSR 208

Query: 353 ANSGIERMKIIDAVAK---SVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFN 412
            NS + R ++I  +A    ++   +KVDL NP  T++V+I+K VC + VV+ Y    K+N
Sbjct: 209 NNSHVNREEVIRELAGIVCTLNSENKVDLTNPQYTVVVEIIKAVCCLSVVKDYMLFRKYN 267

Query: 413 LRQL 414
           L+++
Sbjct: 269 LQEV 267

[Close]

BLAST of Spo11989.1 vs. ExPASy Swiss-Prot
Match: YB0A_SCHPO (Uncharacterized protein C25H2.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC25H2.10c PE=3 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 1.400e-8
Identity = 51/184 (27.72%), Postives = 92/184 (50.00%), Query Frame = 1


		  
Query: 233 ESNHQNAEMSVDRLIEAELKELGDKSKRRFSKIDTGCN-GVVIVQMRKRDGDPSPGEIGQ 292
           +S+ Q  E   + L +A  KE+    K+   ++ T     +  V   K      P  + +
Sbjct: 71  QSSDQENEEEGEELEDAVAKEINSLQKKNKKELLTPIMLDMPCVYFVKTRPPIDPVRLVE 130

Query: 293 HLMESASRTKKHMSRFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSG--TPFAVQY 352
              E   +TKK M+R+  R++P+  +   S +++    K LI+  F         FAVQ 
Sbjct: 131 FTCE-VGKTKK-MTRYTQRLIPIVRTTGVSLDDLEELAKSLIDPLFHEGQEGIKEFAVQA 190

Query: 353 DARANSGIERMKIIDAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFN 412
           + R ++ +++  I   VA+ V + H VDLKN    I+VQ++K +  I +V+ ++EL +FN
Sbjct: 191 NIRNHTVLKKDDIYRTVARIVGKQHMVDLKNFKLLILVQVIKNIIGISIVQNFEELRRFN 250

Query: 413 LRQL 414
           L ++
Sbjct: 251 LNEV 252

[Close]

BLAST of Spo11989.1 vs. TAIR (Arabidopsis)
Match: AT5G12410.1 (THUMP domain-containing protein)

HSP 1 Score: 367.5 bits (942), Expect = 1.100e-101
Identity = 222/412 (53.88%), Postives = 280/412 (67.96%), Query Frame = 1


		  
Query: 10  ATTNDPKKRKRSYLPHNKPVKKKGYNPLRPGFQGFFITCDGGREHQASQEAINVIDTIQE 69
           A+ +  KKRK+ Y P N+PVKKKG  PL+PG QGFFI+CDGGRE QA+QEAINVID+  E
Sbjct: 2   ASGDQSKKRKQHYRPQNRPVKKKGSYPLKPGVQGFFISCDGGREFQAAQEAINVIDSFFE 61

Query: 70  EELIDGKDSDSNPAAKPEKPANKKIKFTYSDSSDNDEDDDENEKDNQSEKVAEEGTNNGS 129
           E LI G DS  NP      P NKK+ F+YS+    DED++E+E +N      EE  N G 
Sbjct: 62  E-LIQGTDSKVNPGLFGN-PINKKVTFSYSE----DEDEEEDESNN-----GEEEENKGD 121

Query: 130 SVEENTDPAKKDDQLVEIGSGQVAGDVGEVAKLADEDKSKEKEELHGVGSGQV--AGDDE 189
                      D  +V  G   +  +  E+A     D+  EK E+   GS +V    ++E
Sbjct: 122 G----------DKAVVSEGGNDLVNE-KEIASEGVNDQVNEK-EIASEGSCEVKQLAENE 181

Query: 190 EVAKLEDGKSKEN--EEPLEKKQCCDTKKLESNHQNAEMSCCDTKKLESNHQNAEMSVDR 249
            V + ED  +++N  +EP  KK C +                +   L   ++NAE S+D+
Sbjct: 182 TVKEEEDKGNQKNGGDEPPRKKTCTE----------------EANPLAKVNENAEKSIDK 241

Query: 250 LIEAELKELGDKSKRRFSKIDTGCNGVVIVQMRKRDGDPSPGEIGQHLMESASRTKKHMS 309
           LIEAELKELGDKSKRRF K+D GCNG+V +QM+KRDGDPSP EI QH M SA+ TKKHMS
Sbjct: 242 LIEAELKELGDKSKRRFMKLDPGCNGLVFIQMKKRDGDPSPKEIVQHAMTSAAATKKHMS 301

Query: 310 RFLLRVLPVEVSCYSSEEEISRAIKPLIEQYFPVNSGTP--FAVQYDARANSGIERMKII 369
           RF+LR+LP+EVSCY SEEEISRAIKPL+EQYFP+ +  P  FAV Y ARAN+G++RMKII
Sbjct: 302 RFILRLLPIEVSCYPSEEEISRAIKPLVEQYFPIETENPRKFAVLYGARANTGLDRMKII 361

Query: 370 DAVAKSVPEPHKVDLKNPDKTIIVQIVKTVCLIGVVEKYKELSKFNLRQLTS 416
           + +AKS+P PHKVDL NP+ TI+V+I+KTVCLIGVVEKYKEL+K+NLRQLTS
Sbjct: 362 NTIAKSIPAPHKVDLSNPEMTIVVEIIKTVCLIGVVEKYKELAKYNLRQLTS 374

The following BLAST results are available for this feature:

BLAST of Spo11989.1 vs. NCBI nr
BLAST of Spo11989.1 vs. UniProtKB/TrEMBL
BLAST of Spo11989.1 vs. ExPASy Swiss-Prot
BLAST of Spo11989.1 vs. TAIR (Arabidopsis)

BLAST of Spo11989.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902232421\|gb\|KNA22616.1\|	1.8e-210	94.9	hypothetical protein SOVF_0310...	[more]
gi\|731325828\|ref\|XP_010673711.1\|	8.8e-133	66.2	PREDICTED: uncharacterized pro...	[more]
gi\|225436571\|ref\|XP_002278600.1\|	9.2e-106	54.8	PREDICTED: THUMP domain-contai...	[more]
gi\|802765015\|ref\|XP_012090052.1\|	1.7e-104	54.9	PREDICTED: THUMP domain-contai...	[more]
gi\|590584338\|ref\|XP_007015151.1\|	1.5e-103	54.7	THUMP domain-containing protei...	[more]

BLAST of Spo11989.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RSW1_SPIOL	1.2e-210	94.9	Uncharacterized protein OS=Spi...	[more]
A0A0J8CRC9_BETVU	6.1e-133	66.2	Uncharacterized protein OS=Bet...	[more]
D7SNG3_VITVI	6.4e-106	54.8	Putative uncharacterized prote...	[more]
A0A067JRH7_JATCU	1.2e-104	54.9	Uncharacterized protein OS=Jat...	[more]
A0A061GSG5_THECC	1.0e-103	54.7	THUMP domain-containing protei...	[more]

BLAST of Spo11989.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
THUM1_DROME	1.2e-20	33.3	THUMP domain-containing protei...	[more]
THUM1_MOUSE	2.9e-19	29.3	THUMP domain-containing protei...	[more]
THUM1_BOVIN	8.5e-19	31.6	THUMP domain-containing protei...	[more]
THUM1_HUMAN	3.2e-18	28.2	THUMP domain-containing protei...	[more]
YB0A_SCHPO	1.4e-8	27.7	Uncharacterized protein C25H2....	[more]

BLAST of Spo11989.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G12410.1	1.1e-101	53.8	THUMP domain-containing protei...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004114	THUMP domain	PFAM	PF02926	THUMP	coord: 289..399 score: 4.8
IPR004114	THUMP domain	SMART	SM00981	THUMP_a_2	coord: 310..400 score: 1.
IPR004114	THUMP domain	PROFILE	PS51165	THUMP	coord: 296..400 score: 21
None	No IPR available	unknown	Coil	Coil	coord: 229..249 scor
None	No IPR available	PANTHER	PTHR13452	THUMP DOMAIN CONTAINING PROTEIN 1-RELATED	coord: 1..72 score: 3.0E-97coord: 222..416 score: 3.0
None	No IPR available	PANTHER	PTHR13452:SF10	THUMP DOMAIN-CONTAINING PROTEIN 1	coord: 1..72 score: 3.0E-97coord: 222..416 score: 3.0
None	No IPR available	unknown	SSF143437	THUMP domain-like	coord: 321..399 score: 6.63

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006310	DNA recombination
biological_process	GO:0043247	telomere maintenance in response to DNA damage
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0009845	seed germination
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0010332	response to gamma radiation
biological_process	GO:0050826	response to freezing
biological_process	GO:0032204	regulation of telomere maintenance
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0051604	protein maturation
biological_process	GO:0010048	vernalization response
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0009933	meristem structural organization
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0010074	maintenance of meristem identity
biological_process	GO:0019915	lipid storage
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003723	RNA binding