Spo12128.1 (mRNA) | SpinachBase

Overview


Name	Spo12128.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Putative mitochondrial outer membrane protein porin-like (Voltage-dependent anion-selective channel protein-like)
Location	SpoScf_53547 : 266 .. 673 (+)
Sequence length	304

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTTCCGTGTTCCTTATCAGAGATCTGGCAAGGTACCATACAATTATCTTTCTAGTATTTTCTTACCTAAAGAGGCATGGTTCAAGATACTACGGGATAATGGTTCTAATTTGTGGAGTATAAATTATGTTAACAGGTTGAGCTTCAGTATTTGCATGAGTATGCTGGCATCAGCAGAAGCCTTGGTTTGACAGCAAACCCCATTGTCAACTTTTCTGGTGTTTTTGGAAACAGTACTCTTGCTTTGGGTACTGACCTCTCATTTGACACTGCTTCTGGAAACTTCACCAAATGCAATGCTGNCTTTGGGTACTGACCTCTCATTTGACACTGCTTCTGGAAACTTCACCAAATGCAATGCTGGACTAAGCTTTACTAATGATGATCTCATTGCATCTGTGAATGTG

mRNA sequence

AGTTTCCGTGTTCCTTATCAGAGATCTGGCAAGGTTGAGCTTCAGTATTTGCATGAGTATGCTGGCATCAGCAGAAGCCTTGGTTTGACAGCAAACCCCATTGTCAACTTTTCTGGTGTTTTTGGAAACAGTACTCTTGCTTTGGGTACTGACCTCTCATTTGACACTGCTTCTGGAAACTTCACCAAATGCAATGCTGNCTTTGGGTACTGACCTCTCATTTGACACTGCTTCTGGAAACTTCACCAAATGCAATGCTGGACTAAGCTTTACTAATGATGATCTCATTGCATCTGTGAATGTG

Coding sequence (CDS)

AGTTTCCGTGTTCCTTATCAGAGATCTGGCAAGGTTGAGCTTCAGTATTTGCATGAGTATGCTGGCATCAGCAGAAGCCTTGGTTTGACAGCAAACCCCATTGTCAACTTTTCTGGTGTTTTTGGAAACAGTACTCTTGCTTTGGGTACTGACCTCTCATTTGACACTGCTTCTGGAAACTTCACCAAATGCAATGCTGNCTTTGGGTACTGA

Protein sequence

SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGNFTKCNAXFGY

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo12128	Spo12128	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo12128.1	Spo12128.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12128.1.exon.1	Spo12128.1.exon.1	exon
Spo12128.1.exon.2	Spo12128.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12128.1.CDS.1	Spo12128.1.CDS.1	CDS
Spo12128.1.CDS.2	Spo12128.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12128.1.utr3p.1	Spo12128.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo12128.1 vs. NCBI nr
Match: gi|1256259|gb|AAA96275.1| (voltage-dependent anion channel protein [Spinacia oleracea])

HSP 1 Score: 129.0 bits (323), Expect = 3.200e-27
Identity = 64/70 (91.43%), Postives = 65/70 (92.86%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SFRVP QRSGKVELQYLHEYAGIS SLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN
Sbjct: 95  SFRVPDQRSGKVELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   +
Sbjct: 155 FTKCNAGLSF 164

[Close]

BLAST of Spo12128.1 vs. NCBI nr
Match: gi|731344143|ref|XP_010683253.1| (PREDICTED: mitochondrial outer membrane protein porin of 36 kDa [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 126.7 bits (317), Expect = 1.600e-26
Identity = 63/70 (90.00%), Postives = 64/70 (91.43%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SFRVP QRSGKVELQYLHEYAGIS SLGLTANPIVNFSGV GNSTLALGTDLSFDTASGN
Sbjct: 95  SFRVPDQRSGKVELQYLHEYAGISTSLGLTANPIVNFSGVIGNSTLALGTDLSFDTASGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   +
Sbjct: 155 FTKCNAGLNF 164

[Close]

BLAST of Spo12128.1 vs. NCBI nr
Match: gi|296086428|emb|CBI32017.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 120.9 bits (302), Expect = 8.700e-25
Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF +P QRSGKVELQYLHEYAGIS S+GLTANPIVNFSGV GN+TL+LGTDLSFDTA+GN
Sbjct: 95  SFIIPDQRSGKVELQYLHEYAGISTSIGLTANPIVNFSGVVGNNTLSLGTDLSFDTATGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA  G+
Sbjct: 155 FTKCNAGLGF 164

[Close]

BLAST of Spo12128.1 vs. NCBI nr
Match: gi|225424908|ref|XP_002276636.1| (PREDICTED: mitochondrial outer membrane protein porin of 36 kDa [Vitis vinifera])

HSP 1 Score: 120.9 bits (302), Expect = 8.700e-25
Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF +P QRSGKVELQYLHEYAGIS S+GLTANPIVNFSGV GN+TL+LGTDLSFDTA+GN
Sbjct: 95  SFIIPDQRSGKVELQYLHEYAGISTSIGLTANPIVNFSGVVGNNTLSLGTDLSFDTATGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA  G+
Sbjct: 155 FTKCNAGLGF 164

[Close]

BLAST of Spo12128.1 vs. NCBI nr
Match: gi|590649630|ref|XP_007032450.1| (Voltage dependent anion channel 1 [Theobroma cacao])

HSP 1 Score: 118.6 bits (296), Expect = 4.300e-24
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SFRVP QRSGKVELQYLH+YAGIS S+GLTANPIVNFSGVFG + LALGTDLSFDT +GN
Sbjct: 95  SFRVPDQRSGKVELQYLHDYAGISSSIGLTANPIVNFSGVFGTNVLALGTDLSFDTKTGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   +
Sbjct: 155 FTKCNAGLSF 164

[Close]

BLAST of Spo12128.1 vs. UniProtKB/TrEMBL
Match: Q41368_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SVDAC1 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.200e-27
Identity = 64/70 (91.43%), Postives = 65/70 (92.86%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SFRVP QRSGKVELQYLHEYAGIS SLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN
Sbjct: 95  SFRVPDQRSGKVELQYLHEYAGISTSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   +
Sbjct: 155 FTKCNAGLSF 164

[Close]

BLAST of Spo12128.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C4I7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g154570 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.100e-26
Identity = 63/70 (90.00%), Postives = 64/70 (91.43%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SFRVP QRSGKVELQYLHEYAGIS SLGLTANPIVNFSGV GNSTLALGTDLSFDTASGN
Sbjct: 95  SFRVPDQRSGKVELQYLHEYAGISTSLGLTANPIVNFSGVIGNSTLALGTDLSFDTASGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   +
Sbjct: 155 FTKCNAGLNF 164

[Close]

BLAST of Spo12128.1 vs. UniProtKB/TrEMBL
Match: F6HPF2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01650 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 6.000e-25
Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF +P QRSGKVELQYLHEYAGIS S+GLTANPIVNFSGV GN+TL+LGTDLSFDTA+GN
Sbjct: 95  SFIIPDQRSGKVELQYLHEYAGISTSIGLTANPIVNFSGVVGNNTLSLGTDLSFDTATGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA  G+
Sbjct: 155 FTKCNAGLGF 164

[Close]

BLAST of Spo12128.1 vs. UniProtKB/TrEMBL
Match: A0A061EEK9_THECC (Voltage dependent anion channel 1 OS=Theobroma cacao GN=TCM_018364 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.000e-24
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SFRVP QRSGKVELQYLH+YAGIS S+GLTANPIVNFSGVFG + LALGTDLSFDT +GN
Sbjct: 95  SFRVPDQRSGKVELQYLHDYAGISSSIGLTANPIVNFSGVFGTNVLALGTDLSFDTKTGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   +
Sbjct: 155 FTKCNAGLSF 164

[Close]

BLAST of Spo12128.1 vs. UniProtKB/TrEMBL
Match: A9P802_POPTR (Porin family protein OS=Populus trichocarpa GN=POPTR_0010s04240g PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 8.700e-24
Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF+VP QRSGKVELQY HEYAGIS SLGLTANPIVNFSGV G++ +ALGTDLSFDTA+GN
Sbjct: 95  SFKVPDQRSGKVELQYQHEYAGISTSLGLTANPIVNFSGVVGSNVVALGTDLSFDTATGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   Y
Sbjct: 155 FTKCNAGLSY 164

[Close]

BLAST of Spo12128.1 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 8.600e-25
Identity = 54/70 (77.14%), Postives = 63/70 (90.00%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF VP Q+SGKVELQYLHEYAGI+ S+GLTA+P+VNFSGV GN+T+ALGTDLSFDTA+GN
Sbjct: 95  SFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGN 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   +
Sbjct: 155 FTKCNAGLSF 164

[Close]

BLAST of Spo12128.1 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 8.100e-23
Identity = 50/70 (71.43%), Postives = 60/70 (85.71%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SFRVP QRSGK+E+QYLH+YAGI  S+GLTANPIVNFSGV G + +ALGTD+SFDT +G+
Sbjct: 95  SFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGD 154

Query: 61  FTKCNAXFGY 71
           FTKCNA   +
Sbjct: 155 FTKCNAGLSF 164

[Close]

BLAST of Spo12128.1 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=VDAC1 PE=1 SV=3)

HSP 1 Score: 105.9 bits (263), Expect = 1.800e-22
Identity = 51/70 (72.86%), Postives = 58/70 (82.86%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF+VP Q SGKVELQYLHEYAGIS S+GLT NP VNFSGV G++ LA+GTD+SFDT SGN
Sbjct: 95  SFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGN 154

Query: 61  FTKCNAXFGY 71
           FTK NA   +
Sbjct: 155 FTKINAGLSF 164

[Close]

BLAST of Spo12128.1 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.900e-20
Identity = 47/70 (67.14%), Postives = 55/70 (78.57%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF VP Q+SGKVELQYLH+YAGI+ S+GLTANP+VN SG FG S LA+G D+S DTA+ N
Sbjct: 95  SFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKN 154

Query: 61  FTKCNAXFGY 71
           F K NA   Y
Sbjct: 155 FAKYNAALSY 164

[Close]

BLAST of Spo12128.1 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2)

HSP 1 Score: 95.1 bits (235), Expect = 3.200e-19
Identity = 47/70 (67.14%), Postives = 52/70 (74.29%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF+VP Q SGKVELQYLHEYAGIS S+GL ANPIVNFS V G + LA G D+SFDT  G 
Sbjct: 95  SFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGE 154

Query: 61  FTKCNAXFGY 71
            TK NA   +
Sbjct: 155 LTKSNAAVNF 164

[Close]

BLAST of Spo12128.1 vs. TAIR (Arabidopsis)
Match: AT3G01280.1 (voltage dependent anion channel 1)

HSP 1 Score: 105.9 bits (263), Expect = 1.000e-23
Identity = 51/70 (72.86%), Postives = 58/70 (82.86%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF+VP Q SGKVELQYLHEYAGIS S+GLT NP VNFSGV G++ LA+GTD+SFDT SGN
Sbjct: 95  SFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGN 154

Query: 61  FTKCNAXFGY 71
           FTK NA   +
Sbjct: 155 FTKINAGLSF 164

[Close]

BLAST of Spo12128.1 vs. TAIR (Arabidopsis)
Match: AT5G15090.1 (voltage dependent anion channel 3)

HSP 1 Score: 85.5 bits (210), Expect = 1.400e-17
Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = 1


		  
Query: 3   RVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGNFT 62
           ++P  +SGK E+QY H+YAGIS S+G TA PIVNFSGV G + L+LGTD++++T SGNF 
Sbjct: 97  KLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFK 156

Query: 63  KCNAXFGY 71
             NA F +
Sbjct: 157 HFNAGFNF 164

[Close]

BLAST of Spo12128.1 vs. TAIR (Arabidopsis)
Match: AT5G57490.1 (voltage dependent anion channel 4)

HSP 1 Score: 69.3 bits (168), Expect = 1.100e-12
Identity = 29/70 (41.43%), Postives = 49/70 (70.00%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF++P  +SGK+++QY+H +A ++ S+GL   P+++ S   G+  + LG ++SFDTAS +
Sbjct: 95  SFKIPDHKSGKLDVQYVHPHATLNSSIGLNPTPLLDLSATIGSQNVCLGGEVSFDTASSS 154

Query: 61  FTKCNAXFGY 71
            TK NA  G+
Sbjct: 155 LTKYNAGIGF 164

[Close]

BLAST of Spo12128.1 vs. TAIR (Arabidopsis)
Match: AT5G67500.2 (voltage dependent anion channel 2)

HSP 1 Score: 58.5 bits (140), Expect = 1.900e-9
Identity = 24/66 (36.36%), Postives = 41/66 (62.12%), Query Frame = 1


		  
Query: 1   SFRVPYQRSGKVELQYLHEYAGISRSLGLTANPIVNFSGVFGNSTLALGTDLSFDTASGN 60
           SF+VP   S K+E+QY H++A ++ +  L  NP+++ +   G+  ++ G +  +DT S  
Sbjct: 122 SFKVPDYNSAKLEVQYFHDHATVTAAAALKQNPLIDITATLGSPVISFGAEAGYDTTSKT 181

Query: 61  FTKCNA 67
           FTK NA
Sbjct: 182 FTKYNA 187

The following BLAST results are available for this feature:

BLAST of Spo12128.1 vs. NCBI nr
BLAST of Spo12128.1 vs. UniProtKB/TrEMBL
BLAST of Spo12128.1 vs. ExPASy Swiss-Prot
BLAST of Spo12128.1 vs. TAIR (Arabidopsis)

BLAST of Spo12128.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|1256259\|gb\|AAA96275.1\|	3.2e-27	91.4	voltage-dependent anion channe...	[more]
gi\|731344143\|ref\|XP_010683253.1\|	1.6e-26	90.0	PREDICTED: mitochondrial outer...	[more]
gi\|296086428\|emb\|CBI32017.3\|	8.7e-25	82.8	unnamed protein product [Vitis...	[more]
gi\|225424908\|ref\|XP_002276636.1\|	8.7e-25	82.8	PREDICTED: mitochondrial outer...	[more]
gi\|590649630\|ref\|XP_007032450.1\|	4.3e-24	81.4	Voltage dependent anion channe...	[more]

BLAST of Spo12128.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
Q41368_SPIOL	2.2e-27	91.4	Uncharacterized protein OS=Spi...	[more]
A0A0J8C4I7_BETVU	1.1e-26	90.0	Uncharacterized protein OS=Bet...	[more]
F6HPF2_VITVI	6.0e-25	82.8	Putative uncharacterized prote...	[more]
A0A061EEK9_THECC	3.0e-24	81.4	Voltage dependent anion channe...	[more]
A9P802_POPTR	8.7e-24	81.4	Porin family protein OS=Populu...	[more]

BLAST of Spo12128.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
VDAC2_SOLTU	8.6e-25	77.1	Mitochondrial outer membrane p...	[more]
VDAC1_SOLTU	8.1e-23	71.4	Mitochondrial outer membrane p...	[more]
VDAC1_ARATH	1.8e-22	72.8	Mitochondrial outer membrane p...	[more]
VDAC1_WHEAT	2.9e-20	67.1	Mitochondrial outer membrane p...	[more]
VDAC_PEA	3.2e-19	67.1	Outer plastidial membrane prot...	[more]

BLAST of Spo12128.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT3G01280.1	1.0e-23	72.8	voltage dependent anion channe...	[more]
AT5G15090.1	1.4e-17	57.3	voltage dependent anion channe...	[more]
AT5G57490.1	1.1e-12	41.4	voltage dependent anion channe...	[more]
AT5G67500.2	1.9e-9	36.3	voltage dependent anion channe...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023614	Porin domain	GENE3D	2.40.160.10		coord: 2..70 score: 3.0
IPR027246	Eukaryotic porin/Tom40	PFAM	PF01459	Porin_3	coord: 7..70 score: 2.2
None	No IPR available	PANTHER	PTHR11743	VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL	coord: 1..70 score: 4.9
None	No IPR available	PANTHER	PTHR11743:SF31	SUBFAMILY NOT NAMED	coord: 1..70 score: 4.9

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0044070	regulation of anion transport
cellular_component	GO:0005741	mitochondrial outer membrane
molecular_function	GO:0008308	voltage-gated anion channel activity