Spo12153.1 (mRNA) | SpinachBase

Overview


Name	Spo12153.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Plastid 16-kDa outer membrane protein
Location	chr6 : 33693944 .. 33697233 (-)
Sequence length	1164

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGACCATTTCTAGGAAGAGCCGTTCAAATCTCATCACAAATCTCAAAATTTCATCAATCATCCTTCTATAATTACATACCGTTTCCCAAGCTTCATTTCCCGCACTACACTCACCCTCACAATCTCACTCTCACATTCTCACCCACACACAATCTTGAGAGAGAAAAACTGTTAGAGAGAGAAAGATGCCGAGAAGCAGCTTCGCCAAGGTGGACGTGGTTGTCGACACTGGTAACCCATTGTTGGACCGCACCGTTGATGGGTTCTTGAAGATTGGCGCCGTAAATATCTTTATCCCTGTCCTTAATTTCGTCTTCATTTTGTTATATTTCAATTACCCTTTGGTTGAATTTCGAAAATCTGTTTAGTTTTTATTTCTGGGTTTTTGATTTTTATTGTCATATTTTCAGGTTGCAGCTACCAGAGCCGTTGCTGAAGATGCATACCACGTTGCTAAGAGAGGTTCTTACTCTTACTTTTGAATTTCTGTGTTTTTGTGTGGCGATTGTGGTGATTTTGACAGTCTGTGATTTAGGGGTTCGAATTATGTTGTCGCATTACTCGTTTAAATTACACTATCAACGTGACTATCAATTCGAGACGGGATCCTCACCCCTTTGTACTAATGCAATTATTTGATTCTTGGTAATGTTTAATTGACAAATGTGCTAAATGTTAATTTTGATAAGAGAGGTTGTCAATTGCCACTCATTTTGTGCTTCATTTTCGCTTTTGTTGCGTTGTATTCTTGAATTGTTTTTGATGATGAAATGTTGAGAAATATGTACCATTCTAGTACGGATTTAGTTGTCACGTTACTGGTTTTAATTACATTGTCAATGTGACTATGAATTAGGCACCCTATGGTGTAATTTGTTTTGTACCCACTTACCACAACTGGTATTTATAAAAGCAATAATCTGCAATTATAGGATGATTATGGGATTCTTTGTTTTGTAAACACTTGGTAATCTGCTAATTAACCACATTTTTTTTCGTCTTGGCAGGAAGTATTTCAACTAAGGATGCTGAGCACACTGTAAGCTTATTGTTTTGTTTTTGTTGCTTGAATTATGGAGCACACTGTAATGCCTTAAAAAACCGTGTATGGTTTTCGTAAATTAAACCAAAAAGAAAAGAGATAACGAATTTGGAGAGATATCTATGGCTATTACAGAGTGCATTTTGTTTTATCTTGTCTTGGAAAATGCAGGCCCAACTAGGCTACGATAATGTTAATAACCTACTTGTAATATCCTAAAAATTTATCCTGAAATTTAACAAACATGTTTATATGTAATATGTTTGCAGCTCAAAAAGATGTGCAAAGAAGGAGCATACTGGGGTAAGTGCTAACTTTTCTTCTACAGTACAAACTACAAACATTATAGAAGTGTTAATTGTTTCCAAACTTGACCGCTGTTACTTTTATACTCTGCAGGGACCGTTGCTGGTGTTTATACTGGGATGGAGTACGGAATAAGAAGGGCTCGTGGCACAAGTGATTGGGTAAGTTCTTCCTCGAATCAATCAATAAGTAATCTTTATCAATTTATCATTGCAATTTACTGTTTTGATTGAGAAAGTGATACATAATGCTGAGTTGAACGCAGTAAATAAAAATTGATCCGTGTTTTCAGAATAAGGTGCATTACATTGTGTCCATTGTATGAAGTACACGTACTTAGACTTTTTCCACTGATCTTAAAACAGACTTAACATATCTTAAAGGCACTGATAGTGCACTATATTCAGGATAGTTAATAAACAATGAATCCTCTTGTTTTTCCCTTCCCTGCTCATACTGGGTATCTTTTGCTTATACTCTGTACTGAGTTTATAAATTATAAGCAATGTCAATTTGCACCATTATTGAAGTTATGTAATTAATTCAAGTTATTCGGATTCTTCATTTTACAAGTGTTCGATCATTGACACTCGGTCATAGTTATGGACACTTTTGATACTTAATTTTTTGTCCAAAATCATGGAAAATTTTCACAAAATAGCCAATTCGAACATTATATTATTAGTTTGACACAAAATCCTCCCCACTCTTTTTATTATTTATTATTTTTCTTTTACAGAGAGGTTAGTATGTTGTCTTGAAGTTACTACCCACCATGTCCCCTTTGCAATTCTTTTCTTTATTGGTTTTGTGGTTACATATGCTTGTGAAAGAATTACCACAAACTGATTCTAGTATTTTGAGTTTCTTCTATTTTGGGGTTTAAGGAGGAGGGAGAGTACAATACTTCCTGAAAACCACTTATTATTGGCATCCTAAATAGTGTATAATACTTCCTAAACTTCGACAGGTTTACATTCTCCTTTTGACAAAAGTTTACAAGCCATAATAAGTAGTTTACTAATTTGTTAGGGATGTATTTTCTTGAATTTGGAAGGTAAGATAATCAGCTTTCTTTTTATTGTTTATGATTTGACACGGATTAAGACTATGTATGTATAGCTTAATAACGGATCTTTCTTTGTTTCATTTCATATTGATGACTATCTTGCTTTTCTATTTGGATGGAAACCCGTGGTGCTATTGAATTTCTTAACGAGTATCATTTTTGTTTTTGATAACCAGAAAAACGCAATGATTGCTGGTGCATTGACTGGAGCTCTGACGTCTGCAGTGACCAGCGGTGAGAAAGATAAAATCGTGTTGGATGCTCTCACAGGAGGTGCAGTCGCAACTGCTGCAGAGTTTATCAACTATCTCACTTATTAATTACTAATTAGGCCTTAATTAAGCCATCCATATCCATATCCATATCCATATCTGCTGTGTAGATAAGGATTAAGGAAGAGAACATCTTGTCTCTGTTCTTCCGTAGTTTTGAGGTTGCCTGAATAATCAAACATTTAGAACTAGCGTACAGACGGAATTCATCAATAAAACTACCTTGTGTTTTTATTGGTAATATTTATGAATGAGCAACTAGTACTTTATTTGATGTTTTTGGTTTGGCTGCGAAAGGGCCGAGTACCAGATTCTGGGATCTGTCTAATTGATCATCAAACAAATTTCACCAGGTCTCATTTTCTCTGTTTCCCCCAACAGTATCATCTTTGGCATAACCTATCCCCCATTCTCCCATGAAAAATAAACTGAATTCATACTACATTCACCAACCAATCCAGTCCTGATTCTGGAATGCAGTTTTTCTTTAAATAACTTCAGAATTGAAATTCTGAGTGCAAAGAAAATGATTCCGGTTAAATATATGTTAAAAAAAAAAAAAAATACAGGTAGCAAGATGGAAATGCAAAGGTTTAGTAG

mRNA sequence

TTGACCATTTCTAGGAAGAGCCGTTCAAATCTCATCACAAATCTCAAAATTTCATCAATCATCCTTCTATAATTACATACCGTTTCCCAAGCTTCATTTCCCGCACTACACTCACCCTCACAATCTCACTCTCACATTCTCACCCACACACAATCTTGAGAGAGAAAAACTGTTAGAGAGAGAAAGATGCCGAGAAGCAGCTTCGCCAAGGTGGACGTGGTTGTCGACACTGGTAACCCATTGTTGGACCGCACCGTTGATGGGTTCTTGAAGATTGGCGCCGTTGCAGCTACCAGAGCCGTTGCTGAAGATGCATACCACGTTGCTAAGAGAGGAAGTATTTCAACTAAGGATGCTGAGCACACTCTCAAAAAGATGTGCAAAGAAGGAGCATACTGGGGGACCGTTGCTGGTGTTTATACTGGGATGGAGTACGGAATAAGAAGGGCTCGTGGCACAAGTGATTGGAAAAACGCAATGATTGCTGGTGCATTGACTGGAGCTCTGACGTCTGCAGTGACCAGCGGTGAGAAAGATAAAATCGTGTTGGATGCTCTCACAGGAGGTGCAGTCGCAACTGCTGCAGAGTTTATCAACTATCTCACTTATTAATTACTAATTAGGCCTTAATTAAGCCATCCATATCCATATCCATATCCATATCTGCTGTGTAGATAAGGATTAAGGAAGAGAACATCTTGTCTCTGTTCTTCCGTAGTTTTGAGGTTGCCTGAATAATCAAACATTTAGAACTAGCGTACAGACGGAATTCATCAATAAAACTACCTTGTGTTTTTATTGGTAATATTTATGAATGAGCAACTAGTACTTTATTTGATGTTTTTGGTTTGGCTGCGAAAGGGCCGAGTACCAGATTCTGGGATCTGTCTAATTGATCATCAAACAAATTTCACCAGGTCTCATTTTCTCTGTTTCCCCCAACAGTATCATCTTTGGCATAACCTATCCCCCATTCTCCCATGAAAAATAAACTGAATTCATACTACATTCACCAACCAATCCAGTCCTGATTCTGGAATGCAGTTTTTCTTTAAATAACTTCAGAATTGAAATTCTGAGTGCAAAGAAAATGATTCCGGTTAAATATATGTTAAAAAAAAAAAAAAATACAGGTAGCAAGATGGAAATGCAAAGGTTTAGTAG

Coding sequence (CDS)

ATGCCGAGAAGCAGCTTCGCCAAGGTGGACGTGGTTGTCGACACTGGTAACCCATTGTTGGACCGCACCGTTGATGGGTTCTTGAAGATTGGCGCCGTTGCAGCTACCAGAGCCGTTGCTGAAGATGCATACCACGTTGCTAAGAGAGGAAGTATTTCAACTAAGGATGCTGAGCACACTCTCAAAAAGATGTGCAAAGAAGGAGCATACTGGGGGACCGTTGCTGGTGTTTATACTGGGATGGAGTACGGAATAAGAAGGGCTCGTGGCACAAGTGATTGGAAAAACGCAATGATTGCTGGTGCATTGACTGGAGCTCTGACGTCTGCAGTGACCAGCGGTGAGAAAGATAAAATCGTGTTGGATGCTCTCACAGGAGGTGCAGTCGCAACTGCTGCAGAGTTTATCAACTATCTCACTTATTAA

Protein sequence

MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIVLDALTGGAVATAAEFINYLTY

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo12153	Spo12153	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo12153.1	Spo12153.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12153.1.utr5p.1	Spo12153.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12153.1.CDS.6	Spo12153.1.CDS.6	CDS
Spo12153.1.CDS.5	Spo12153.1.CDS.5	CDS
Spo12153.1.CDS.4	Spo12153.1.CDS.4	CDS
Spo12153.1.CDS.3	Spo12153.1.CDS.3	CDS
Spo12153.1.CDS.2	Spo12153.1.CDS.2	CDS
Spo12153.1.CDS.1	Spo12153.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12153.1.utr3p.1	Spo12153.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12153.1.exon.6	Spo12153.1.exon.6	exon
Spo12153.1.exon.5	Spo12153.1.exon.5	exon
Spo12153.1.exon.4	Spo12153.1.exon.4	exon
Spo12153.1.exon.3	Spo12153.1.exon.3	exon
Spo12153.1.exon.2	Spo12153.1.exon.2	exon
Spo12153.1.exon.1	Spo12153.1.exon.1	exon

Homology

[Close]

BLAST of Spo12153.1 vs. NCBI nr
Match: gi|902223209|gb|KNA19390.1| (hypothetical protein SOVF_062040 [Spinacia oleracea])

HSP 1 Score: 278.1 bits (710), Expect = 8.500e-72
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1


		  
Query: 1   MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHT 60
           MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHT
Sbjct: 1   MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHT 60

Query: 61  LKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIV 120
           LKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIV
Sbjct: 61  LKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIV 120

Query: 121 LDALTGGAVATAAEFINYLTY 142
           LDALTGGAVATAAEFINYLTY
Sbjct: 121 LDALTGGAVATAAEFINYLTY 141

[Close]

BLAST of Spo12153.1 vs. NCBI nr
Match: gi|731331559|ref|XP_010676722.1| (PREDICTED: outer envelope pore protein 16, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 227.3 bits (578), Expect = 1.700e-56
Identity = 108/141 (76.60%), Postives = 122/141 (86.52%), Query Frame = 1


		  
Query: 1   MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHT 60
           MPR+  AKV+VVVDTGNPLLDRTVDGF KIG VAATRA AED YH+AK+GS+STK+ E +
Sbjct: 1   MPRTGIAKVNVVVDTGNPLLDRTVDGFFKIGTVAATRAAAEDVYHIAKKGSLSTKNVEES 60

Query: 61  LKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIV 120
           LKKMCKEGAYWGT+AGVYTG+EYG+ R RGT+DWKNAMI GALTGAL S VT G  DKIV
Sbjct: 61  LKKMCKEGAYWGTIAGVYTGLEYGVARVRGTNDWKNAMIGGALTGALVSVVTKGSNDKIV 120

Query: 121 LDALTGGAVATAAEFINYLTY 142
           +D LTG AVATAAEFI+Y+ Y
Sbjct: 121 MDTLTGAAVATAAEFISYVRY 141

[Close]

BLAST of Spo12153.1 vs. NCBI nr
Match: gi|645216982|ref|XP_008223554.1| (PREDICTED: outer envelope pore protein 16, chloroplastic [Prunus mume])

HSP 1 Score: 221.1 bits (562), Expect = 1.200e-54
Identity = 109/146 (74.66%), Postives = 122/146 (83.56%), Query Frame = 1


		  
Query: 1   MPRSSFA------KVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSIST 60
           MPRSSF+      KVDV++D GNPLL+ TVDGFLKIG VAATRA AEDAY V K+GSIST
Sbjct: 1   MPRSSFSGMISGPKVDVIIDLGNPLLNHTVDGFLKIGTVAATRAAAEDAYSVVKKGSIST 60

Query: 61  KDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSG 120
            DAEHTLKKMCKEGAYWGTVAGVY G EYG+ R RGT DWKNAMI GA+TGAL SA T+ 
Sbjct: 61  HDAEHTLKKMCKEGAYWGTVAGVYVGAEYGLERVRGTRDWKNAMIGGAVTGALVSAATNK 120

Query: 121 EKDKIVLDALTGGAVATAAEFINYLT 141
            KDK+++DA+TGGA+ATA EFINYLT
Sbjct: 121 GKDKVIVDAITGGAIATAVEFINYLT 146

[Close]

BLAST of Spo12153.1 vs. NCBI nr
Match: gi|694325453|ref|XP_009353670.1| (PREDICTED: outer envelope pore protein 16, chloroplastic-like isoform X3 [Pyrus x bretschneideri])

HSP 1 Score: 220.3 bits (560), Expect = 2.100e-54
Identity = 109/146 (74.66%), Postives = 123/146 (84.25%), Query Frame = 1


		  
Query: 1   MPRSSFA------KVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSIST 60
           MPRSSF+      +VDVV+D GNPLL+ TVDGFLKIG VAATRAVAEDA+  AK+G+IST
Sbjct: 1   MPRSSFSGALTGPQVDVVIDLGNPLLNHTVDGFLKIGTVAATRAVAEDAFSAAKKGAIST 60

Query: 61  KDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSG 120
           KD EHTLKKMCKEGAYWGTVAGVY G EYGI R RG  DWKNAM+ GALTGAL SA + G
Sbjct: 61  KDFEHTLKKMCKEGAYWGTVAGVYVGAEYGIERVRGRRDWKNAMLGGALTGALVSAASKG 120

Query: 121 EKDKIVLDALTGGAVATAAEFINYLT 141
            KDK+++DA+TGGA+ATAAEFINYLT
Sbjct: 121 NKDKVLVDAITGGAIATAAEFINYLT 146

[Close]

BLAST of Spo12153.1 vs. NCBI nr
Match: gi|595830594|ref|XP_007206105.1| (hypothetical protein PRUPE_ppa012989mg [Prunus persica])

HSP 1 Score: 218.8 bits (556), Expect = 6.100e-54
Identity = 107/146 (73.29%), Postives = 122/146 (83.56%), Query Frame = 1


		  
Query: 1   MPRSSFA------KVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSIST 60
           MPRSSF+      +VDV++D GNPLL+ TVDGFLKIG VAATRA AEDAY + K+GSIST
Sbjct: 1   MPRSSFSGMISGPRVDVIIDLGNPLLNHTVDGFLKIGTVAATRAAAEDAYSMVKKGSIST 60

Query: 61  KDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSG 120
            DAEHTLKKMCKEGAYWGTVAGVY G EYG+ R RGT DWKNAM+ GALTGAL SA T+ 
Sbjct: 61  HDAEHTLKKMCKEGAYWGTVAGVYVGAEYGLERVRGTRDWKNAMMGGALTGALVSAATNK 120

Query: 121 EKDKIVLDALTGGAVATAAEFINYLT 141
            KDK+++DA+TGGA+ATA EFINYLT
Sbjct: 121 GKDKVIVDAITGGAIATAVEFINYLT 146

[Close]

BLAST of Spo12153.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RIT3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_062040 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 5.900e-72
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1


		  
Query: 1   MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHT 60
           MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHT
Sbjct: 1   MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHT 60

Query: 61  LKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIV 120
           LKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIV
Sbjct: 61  LKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIV 120

Query: 121 LDALTGGAVATAAEFINYLTY 142
           LDALTGGAVATAAEFINYLTY
Sbjct: 121 LDALTGGAVATAAEFINYLTY 141

[Close]

BLAST of Spo12153.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F8R6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g102480 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.200e-56
Identity = 108/141 (76.60%), Postives = 122/141 (86.52%), Query Frame = 1


		  
Query: 1   MPRSSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHT 60
           MPR+  AKV+VVVDTGNPLLDRTVDGF KIG VAATRA AED YH+AK+GS+STK+ E +
Sbjct: 1   MPRTGIAKVNVVVDTGNPLLDRTVDGFFKIGTVAATRAAAEDVYHIAKKGSLSTKNVEES 60

Query: 61  LKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIV 120
           LKKMCKEGAYWGT+AGVYTG+EYG+ R RGT+DWKNAMI GALTGAL S VT G  DKIV
Sbjct: 61  LKKMCKEGAYWGTIAGVYTGLEYGVARVRGTNDWKNAMIGGALTGALVSVVTKGSNDKIV 120

Query: 121 LDALTGGAVATAAEFINYLTY 142
           +D LTG AVATAAEFI+Y+ Y
Sbjct: 121 MDTLTGAAVATAAEFISYVRY 141

[Close]

BLAST of Spo12153.1 vs. UniProtKB/TrEMBL
Match: M5W0Q9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012989mg PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.300e-54
Identity = 107/146 (73.29%), Postives = 122/146 (83.56%), Query Frame = 1


		  
Query: 1   MPRSSFA------KVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSIST 60
           MPRSSF+      +VDV++D GNPLL+ TVDGFLKIG VAATRA AEDAY + K+GSIST
Sbjct: 1   MPRSSFSGMISGPRVDVIIDLGNPLLNHTVDGFLKIGTVAATRAAAEDAYSMVKKGSIST 60

Query: 61  KDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSG 120
            DAEHTLKKMCKEGAYWGTVAGVY G EYG+ R RGT DWKNAM+ GALTGAL SA T+ 
Sbjct: 61  HDAEHTLKKMCKEGAYWGTVAGVYVGAEYGLERVRGTRDWKNAMMGGALTGALVSAATNK 120

Query: 121 EKDKIVLDALTGGAVATAAEFINYLT 141
            KDK+++DA+TGGA+ATA EFINYLT
Sbjct: 121 GKDKVIVDAITGGAIATAVEFINYLT 146

[Close]

BLAST of Spo12153.1 vs. UniProtKB/TrEMBL
Match: A0A067KEE6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11047 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.400e-49
Identity = 102/146 (69.86%), Postives = 117/146 (80.14%), Query Frame = 1


		  
Query: 1   MPRSSFA------KVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSIST 60
           MP   FA      +VDV +D GNP L+ TVDGFLKIG VAATRA+AEDAY+V KRG+IS 
Sbjct: 1   MPSKRFAGSLSTPRVDVAIDMGNPFLNLTVDGFLKIGTVAATRALAEDAYYVVKRGNISR 60

Query: 61  KDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSG 120
           ++ E TLKKMCKEGAYWGTVAGVY GMEYG+ R RGT DWKNAM+ GALTGAL SA ++ 
Sbjct: 61  RNLEQTLKKMCKEGAYWGTVAGVYVGMEYGMERIRGTRDWKNAMLGGALTGALISAASNK 120

Query: 121 EKDKIVLDALTGGAVATAAEFINYLT 141
            KDKIV DA+TGGA+ATAA F+NYLT
Sbjct: 121 GKDKIVTDAITGGAIATAATFLNYLT 146

[Close]

BLAST of Spo12153.1 vs. UniProtKB/TrEMBL
Match: C6SW13_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G038200 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.100e-49
Identity = 94/137 (68.61%), Postives = 114/137 (83.21%), Query Frame = 1


		  
Query: 4   SSFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHTLKK 63
           S   ++DV +D GNP L+ TVDGFLKIGAVAATR+ AED YH+ ++G+IS++D E TLKK
Sbjct: 7   SESPRLDVAIDMGNPFLNLTVDGFLKIGAVAATRSAAEDTYHIIQKGNISSRDFEKTLKK 66

Query: 64  MCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSGEKDKIVLDA 123
           MCKEG YWGT+AGVY GMEYG+ R RGT DWKNAMI GA+TGAL SA ++ +KDKI +DA
Sbjct: 67  MCKEGVYWGTIAGVYVGMEYGVERIRGTRDWKNAMIGGAVTGALVSAASNNKKDKIAIDA 126

Query: 124 LTGGAVATAAEFINYLT 141
           +TG A+ATAAEFINYLT
Sbjct: 127 ITGAAIATAAEFINYLT 143

[Close]

BLAST of Spo12153.1 vs. ExPASy Swiss-Prot
Match: OEP16_PEA (Outer envelope pore protein 16, chloroplastic OS=Pisum sativum GN=OEP16 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.200e-52
Identity = 100/146 (68.49%), Postives = 120/146 (82.19%), Query Frame = 1


		  
Query: 1   MPRSSFA------KVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSIST 60
           MPRSSF+      K+DVV+D GNP L+ TVDGFLKIGAVAATR+VAED +H+ ++GSIS+
Sbjct: 1   MPRSSFSGSLSSPKLDVVIDMGNPFLNLTVDGFLKIGAVAATRSVAEDTFHIIRKGSISS 60

Query: 61  KDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSG 120
            D E +LKKMCKEGAYWG +AGVY GMEYG+ R RGT DWKNAM  GA+TGAL SA ++ 
Sbjct: 61  NDFEKSLKKMCKEGAYWGAIAGVYVGMEYGVERIRGTRDWKNAMFGGAVTGALVSAASNN 120

Query: 121 EKDKIVLDALTGGAVATAAEFINYLT 141
           +KDKI +DA+TG A+ATAAEFINYLT
Sbjct: 121 KKDKIAVDAITGAAIATAAEFINYLT 146

[Close]

BLAST of Spo12153.1 vs. ExPASy Swiss-Prot
Match: OP161_ARATH (Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana GN=OEP161 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.700e-40
Identity = 82/143 (57.34%), Postives = 101/143 (70.63%), Query Frame = 1


		  
Query: 1   MPRSSFA------KVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSIST 60
           MP S+F+      K+ V VD GNP L+ TVD FLKIGAV  T+++AED Y    +GS+S 
Sbjct: 1   MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSK 60

Query: 61  KDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSG 120
              EH LKK+CKEG YWG   GVY G EYGI R RG+ DWKNAM+AGA TGA+ SAV   
Sbjct: 61  STLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKK 120

Query: 121 EKDKIVLDALTGGAVATAAEFIN 138
            KD IV+DA+ GGA+ATA++F+N
Sbjct: 121 GKDTIVIDAILGGALATASQFVN 143

[Close]

BLAST of Spo12153.1 vs. ExPASy Swiss-Prot
Match: OP162_ARATH (Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana GN=OEP162 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.600e-16
Identity = 55/162 (33.95%), Postives = 81/162 (50.00%), Query Frame = 1


		  
Query: 5   SFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGS------------- 64
           SF K  +  D G+PLL+R  D F+K   V A +AV+ +AY     G+             
Sbjct: 15  SFEKAHLF-DLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEI 74

Query: 65  -------------ISTKDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRAR-GTSDWKNA 124
                         S+K  +  +K   KE   WG  AG+Y+G+ YG+   R G  DW+N+
Sbjct: 75  TGNKKHRFPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNS 134

Query: 125 MIAGALTGALTSAVTS--GEKDKIVLDALTGGAVATAAEFIN 138
            +AGALTGA  +  TS     +++V  ALTG A++TAA  ++
Sbjct: 135 AVAGALTGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLS 175

[Close]

BLAST of Spo12153.1 vs. TAIR (Arabidopsis)
Match: AT2G28900.1 (outer plastid envelope protein 16-1)

HSP 1 Score: 166.8 bits (421), Expect = 9.800e-42
Identity = 82/143 (57.34%), Postives = 101/143 (70.63%), Query Frame = 1


		  
Query: 1   MPRSSFA------KVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSIST 60
           MP S+F+      K+ V VD GNP L+ TVD FLKIGAV  T+++AED Y    +GS+S 
Sbjct: 1   MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSK 60

Query: 61  KDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVTSG 120
              EH LKK+CKEG YWG   GVY G EYGI R RG+ DWKNAM+AGA TGA+ SAV   
Sbjct: 61  STLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKK 120

Query: 121 EKDKIVLDALTGGAVATAAEFIN 138
            KD IV+DA+ GGA+ATA++F+N
Sbjct: 121 GKDTIVIDAILGGALATASQFVN 143

[Close]

BLAST of Spo12153.1 vs. TAIR (Arabidopsis)
Match: AT4G16160.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein)

HSP 1 Score: 85.1 bits (209), Expect = 3.700e-17
Identity = 55/162 (33.95%), Postives = 81/162 (50.00%), Query Frame = 1


		  
Query: 5   SFAKVDVVVDTGNPLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGS------------- 64
           SF K  +  D G+PLL+R  D F+K   V A +AV+ +AY     G+             
Sbjct: 15  SFEKAHLF-DLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEI 74

Query: 65  -------------ISTKDAEHTLKKMCKEGAYWGTVAGVYTGMEYGIRRAR-GTSDWKNA 124
                         S+K  +  +K   KE   WG  AG+Y+G+ YG+   R G  DW+N+
Sbjct: 75  TGNKKHRFPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNS 134

Query: 125 MIAGALTGALTSAVTS--GEKDKIVLDALTGGAVATAAEFIN 138
            +AGALTGA  +  TS     +++V  ALTG A++TAA  ++
Sbjct: 135 AVAGALTGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLS 175

[Close]

BLAST of Spo12153.1 vs. TAIR (Arabidopsis)
Match: AT3G62880.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein)

HSP 1 Score: 48.5 bits (114), Expect = 3.900e-6
Identity = 27/95 (28.42%), Postives = 42/95 (44.21%), Query Frame = 1


		  
Query: 18  PLLDRTVDGFLKIGAVAATRAVAEDAYHVAKRGSISTKDAEHTLKKMCKEGAYWGTVAGV 77
           P    TV+  L++        +        K G      A    K + + G   G V+GV
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSGVSQASFVAKSIGRFGFQCGLVSGV 69

Query: 78  YTGMEYGIRRARGTSDWKNAMIAGALTGALTSAVT 113
           +T    G++R RG +DW NA++ GA+ GA  +  T
Sbjct: 70  FTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAIST 104

The following BLAST results are available for this feature:

BLAST of Spo12153.1 vs. NCBI nr
BLAST of Spo12153.1 vs. UniProtKB/TrEMBL
BLAST of Spo12153.1 vs. ExPASy Swiss-Prot
BLAST of Spo12153.1 vs. TAIR (Arabidopsis)

BLAST of Spo12153.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902223209\|gb\|KNA19390.1\|	8.5e-72	100.	hypothetical protein SOVF_0620...	[more]
gi\|731331559\|ref\|XP_010676722.1\|	1.7e-56	76.6	PREDICTED: outer envelope pore...	[more]
gi\|645216982\|ref\|XP_008223554.1\|	1.2e-54	74.6	PREDICTED: outer envelope pore...	[more]
gi\|694325453\|ref\|XP_009353670.1\|	2.1e-54	74.6	PREDICTED: outer envelope pore...	[more]
gi\|595830594\|ref\|XP_007206105.1\|	6.1e-54	73.2	hypothetical protein PRUPE_ppa...	[more]

BLAST of Spo12153.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RIT3_SPIOL	5.9e-72	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8F8R6_BETVU	1.2e-56	76.6	Uncharacterized protein OS=Bet...	[more]
M5W0Q9_PRUPE	4.3e-54	73.2	Uncharacterized protein OS=Pru...	[more]
A0A067KEE6_JATCU	1.4e-49	69.8	Uncharacterized protein OS=Jat...	[more]
C6SW13_SOYBN	4.1e-49	68.6	Uncharacterized protein OS=Gly...	[more]

BLAST of Spo12153.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3


Match Name	E-value	Identity	Description
OEP16_PEA	1.2e-52	68.4	Outer envelope pore protein 16...	[more]
OP161_ARATH	1.7e-40	57.3	Outer envelope pore protein 16...	[more]
OP162_ARATH	6.6e-16	33.9	Outer envelope pore protein 16...	[more]

BLAST of Spo12153.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G28900.1	9.8e-42	57.3	outer plastid envelope protein...	[more]
AT4G16160.2	3.7e-17	33.9	Mitochondrial import inner mem...	[more]
AT3G62880.1	3.9e-6	28.4	Mitochondrial import inner mem...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003397	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24	PFAM	PF02466	Tim17	coord: 56..129 score: 2.7
None	No IPR available	PANTHER	PTHR15371	TIM23	coord: 8..139 score: 7.9
None	No IPR available	PANTHER	PTHR15371:SF2	OUTER ENVELOPE PORE PROTEIN 16-1, CHLOROPLASTIC	coord: 8..139 score: 7.9

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0003333	amino acid transmembrane transport
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0045037	protein import into chloroplast stroma
cellular_component	GO:0009707	chloroplast outer membrane
cellular_component	GO:0034426	etioplast membrane
cellular_component	GO:0046930	pore complex
cellular_component	GO:0005773	vacuole
molecular_function	GO:0015171	amino acid transmembrane transporter activity
molecular_function	GO:0015288	porin activity
molecular_function	GO:0042803	protein homodimerization activity