Spo12383.1 (mRNA) | SpinachBase

Overview


Name	Spo12383.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Early light-induced protein, putative
Location	chr6 : 37204996 .. 37205595 (+)
Sequence length	600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATGTCTATGCAAGTTCAAGCCCTTCTTTCCAACTCTGTTGGTACCTTCGCTAACGGGTCTAAAGCGTATCCACTAGGGTTCAATCCTCGGATGGCTAAACGTGTCAATTTCGGGGTGAAGTGTATGGCGGAGGAAGGGGCTGGGGGTGAACCCAAGCTTGACTCCAGTGTACCCAAACCGAACCCCACTTCGTCCTCACCCACCCCCACCCCCACCCCGATCCCAACCCCAAGGCCACAACCAAAGACGGTAAGCACAAACTTCACCGACTTATTCGCCTTTAGCGGCCCTGCACCTGAGAGGATCAACGGACGCCTAGCCATGATCGGGTTCGTGGCCGCAATAGCAGTAGAGCTATCTAACGGCACTGACTTATTTACTCAAATATCCAACGGTGGATCACAATGGTTCCTCGGAACAAGCATCCTTCTTTCAGTAGCATCATTGGTGCCATTGCTCCAAGGAAGTCGAGCAGAAGCAAAGACACAAGGGTTAATGAATGCCAACGCCGAACTTTGGAATGGTAGAATTGCCATGTTAGGGCTTGTTGCCTTGGCTGTAACTGAGATCGTTAAAGGTGGAGCTCTTGTTTGA

mRNA sequence

ATGGCAATGTCTATGCAAGTTCAAGCCCTTCTTTCCAACTCTGTTGGTACCTTCGCTAACGGGTCTAAAGCGTATCCACTAGGGTTCAATCCTCGGATGGCTAAACGTGTCAATTTCGGGGTGAAGTGTATGGCGGAGGAAGGGGCTGGGGGTGAACCCAAGCTTGACTCCAGTGTACCCAAACCGAACCCCACTTCGTCCTCACCCACCCCCACCCCCACCCCGATCCCAACCCCAAGGCCACAACCAAAGACGGTAAGCACAAACTTCACCGACTTATTCGCCTTTAGCGGCCCTGCACCTGAGAGGATCAACGGACGCCTAGCCATGATCGGGTTCGTGGCCGCAATAGCAGTAGAGCTATCTAACGGCACTGACTTATTTACTCAAATATCCAACGGTGGATCACAATGGTTCCTCGGAACAAGCATCCTTCTTTCAGTAGCATCATTGGTGCCATTGCTCCAAGGAAGTCGAGCAGAAGCAAAGACACAAGGGTTAATGAATGCCAACGCCGAACTTTGGAATGGTAGAATTGCCATGTTAGGGCTTGTTGCCTTGGCTGTAACTGAGATCGTTAAAGGTGGAGCTCTTGTTTGA

Coding sequence (CDS)

ATGGCAATGTCTATGCAAGTTCAAGCCCTTCTTTCCAACTCTGTTGGTACCTTCGCTAACGGGTCTAAAGCGTATCCACTAGGGTTCAATCCTCGGATGGCTAAACGTGTCAATTTCGGGGTGAAGTGTATGGCGGAGGAAGGGGCTGGGGGTGAACCCAAGCTTGACTCCAGTGTACCCAAACCGAACCCCACTTCGTCCTCACCCACCCCCACCCCCACCCCGATCCCAACCCCAAGGCCACAACCAAAGACGGTAAGCACAAACTTCACCGACTTATTCGCCTTTAGCGGCCCTGCACCTGAGAGGATCAACGGACGCCTAGCCATGATCGGGTTCGTGGCCGCAATAGCAGTAGAGCTATCTAACGGCACTGACTTATTTACTCAAATATCCAACGGTGGATCACAATGGTTCCTCGGAACAAGCATCCTTCTTTCAGTAGCATCATTGGTGCCATTGCTCCAAGGAAGTCGAGCAGAAGCAAAGACACAAGGGTTAATGAATGCCAACGCCGAACTTTGGAATGGTAGAATTGCCATGTTAGGGCTTGTTGCCTTGGCTGTAACTGAGATCGTTAAAGGTGGAGCTCTTGTTTGA

Protein sequence

MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVPKPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGALV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo12383	Spo12383	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo12383.1	Spo12383.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12383.1.exon.1	Spo12383.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12383.1.CDS.1	Spo12383.1.CDS.1	CDS

Homology

[Close]

BLAST of Spo12383.1 vs. NCBI nr
Match: gi|902194451|gb|KNA12559.1| (hypothetical protein SOVF_124910 [Spinacia oleracea])

HSP 1 Score: 371.3 bits (952), Expect = 1.000e-99
Identity = 196/199 (98.49%), Postives = 196/199 (98.49%), Query Frame = 1


		  
Query: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60
           MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP
Sbjct: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60

Query: 61  KPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120
           KPNPTSSSPTPTP P PTPRPQPK VSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE
Sbjct: 61  KPNPTSSSPTPTPIPTPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120

Query: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180
           LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA
Sbjct: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180

Query: 181 MLGLVALAVTEIVKGGALV 200
           MLGLVALAVTEIVKGGALV
Sbjct: 181 MLGLVALAVTEIVKGGALV 199

[Close]

BLAST of Spo12383.1 vs. NCBI nr
Match: gi|902150947|gb|KNA05469.1| (hypothetical protein SOVF_190050 [Spinacia oleracea])

HSP 1 Score: 343.6 bits (880), Expect = 2.300e-91
Identity = 187/200 (93.50%), Postives = 188/200 (94.00%), Query Frame = 1


		  
Query: 1   MAMSMQVQALLSNSVGTFANG-SKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSV 60
           MAMSMQVQALLSNSVG F NG SKAYPLGFNPRMAKRVNFGVKCMAEE AGGEPKLDS V
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60

Query: 61  PKPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PKPNPT SS    PTPIPTPRPQPK VSTNF DLFAFSGPAPERINGRLAMIGFVAAIAV
Sbjct: 61  PKPNPTVSS----PTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV 120

Query: 121 ELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 200
           AMLGLVALAVTEIVKGGALV
Sbjct: 181 AMLGLVALAVTEIVKGGALV 196

[Close]

BLAST of Spo12383.1 vs. NCBI nr
Match: gi|902202340|gb|KNA14240.1| (hypothetical protein SOVF_109350 [Spinacia oleracea])

HSP 1 Score: 342.8 bits (878), Expect = 4.000e-91
Identity = 186/199 (93.47%), Postives = 188/199 (94.47%), Query Frame = 1


		  
Query: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60
           MAMSMQVQAL+SNSVG F NGSKAYPLGFNPRMAKRVNFGVKCMA EGAGGEPKLDS VP
Sbjct: 1   MAMSMQVQALVSNSVGAFTNGSKAYPLGFNPRMAKRVNFGVKCMA-EGAGGEPKLDSGVP 60

Query: 61  KPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120
           K NPT SS    PTPIPTPRPQPK VSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE
Sbjct: 61  KSNPTVSS----PTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120

Query: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180
           LSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA
Sbjct: 121 LSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180

Query: 181 MLGLVALAVTEIVKGGALV 200
           MLGLVALAVTEIVKGGALV
Sbjct: 181 MLGLVALAVTEIVKGGALV 194

[Close]

BLAST of Spo12383.1 vs. NCBI nr
Match: gi|902164229|gb|KNA06948.1| (hypothetical protein SOVF_176380 [Spinacia oleracea])

HSP 1 Score: 333.2 bits (853), Expect = 3.200e-88
Identity = 179/199 (89.95%), Postives = 185/199 (92.96%), Query Frame = 1


		  
Query: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60
           MAMSMQVQALLSNSVG F NGS AYPLGFNPRM KRV+FGVKCMAEE AGGEPKL+S +P
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGSNAYPLGFNPRMCKRVSFGVKCMAEEKAGGEPKLNSGLP 60

Query: 61  KPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120
           KPNP+ SS T     IPTPRPQPK VSTNFTDLFAFSGPAPERINGRLAMIGF+AAIAVE
Sbjct: 61  KPNPSVSSSTS----IPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFMAAIAVE 120

Query: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180
           LSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA
Sbjct: 121 LSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180

Query: 181 MLGLVALAVTEIVKGGALV 200
           MLGLVALAVTEIVKGGALV
Sbjct: 181 MLGLVALAVTEIVKGGALV 195

[Close]

BLAST of Spo12383.1 vs. NCBI nr
Match: gi|902208596|gb|KNA15989.1| (hypothetical protein SOVF_093280 [Spinacia oleracea])

HSP 1 Score: 328.2 bits (840), Expect = 1.000e-86
Identity = 178/200 (89.00%), Postives = 181/200 (90.50%), Query Frame = 1


		  
Query: 1   MAMSMQVQALLSNSVGTFANG-SKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSV 60
           MAMSMQVQALLSNSVG F NG SKAYPLGFNPRMAKRVNFGVKCMAEE  GGEPKLDS +
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKVGGEPKLDSGL 60

Query: 61  PKPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PKPNPT SS   +PT IPTPRPQPK VSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV
Sbjct: 61  PKPNPTVSS---SPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120

Query: 121 ELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQIS GGSQWFLGTSIL S ASLVPLLQGSRAEAKT+GLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISGGGSQWFLGTSILFSAASLVPLLQGSRAEAKTEGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 200
           AMLGLVALA TE V G ALV
Sbjct: 181 AMLGLVALAFTEFVTGSALV 197

[Close]

BLAST of Spo12383.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZ64_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_124910 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 7.300e-100
Identity = 196/199 (98.49%), Postives = 196/199 (98.49%), Query Frame = 1


		  
Query: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60
           MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP
Sbjct: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60

Query: 61  KPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120
           KPNPTSSSPTPTP P PTPRPQPK VSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE
Sbjct: 61  KPNPTSSSPTPTPIPTPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120

Query: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180
           LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA
Sbjct: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180

Query: 181 MLGLVALAVTEIVKGGALV 200
           MLGLVALAVTEIVKGGALV
Sbjct: 181 MLGLVALAVTEIVKGGALV 199

[Close]

BLAST of Spo12383.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDX3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_190050 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.600e-91
Identity = 187/200 (93.50%), Postives = 188/200 (94.00%), Query Frame = 1


		  
Query: 1   MAMSMQVQALLSNSVGTFANG-SKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSV 60
           MAMSMQVQALLSNSVG F NG SKAYPLGFNPRMAKRVNFGVKCMAEE AGGEPKLDS V
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGV 60

Query: 61  PKPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PKPNPT SS    PTPIPTPRPQPK VSTNF DLFAFSGPAPERINGRLAMIGFVAAIAV
Sbjct: 61  PKPNPTVSS----PTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAV 120

Query: 121 ELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 200
           AMLGLVALAVTEIVKGGALV
Sbjct: 181 AMLGLVALAVTEIVKGGALV 196

[Close]

BLAST of Spo12383.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R401_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_109350 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 2.800e-91
Identity = 186/199 (93.47%), Postives = 188/199 (94.47%), Query Frame = 1


		  
Query: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60
           MAMSMQVQAL+SNSVG F NGSKAYPLGFNPRMAKRVNFGVKCMA EGAGGEPKLDS VP
Sbjct: 1   MAMSMQVQALVSNSVGAFTNGSKAYPLGFNPRMAKRVNFGVKCMA-EGAGGEPKLDSGVP 60

Query: 61  KPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120
           K NPT SS    PTPIPTPRPQPK VSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE
Sbjct: 61  KSNPTVSS----PTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120

Query: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180
           LSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA
Sbjct: 121 LSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180

Query: 181 MLGLVALAVTEIVKGGALV 200
           MLGLVALAVTEIVKGGALV
Sbjct: 181 MLGLVALAVTEIVKGGALV 194

[Close]

BLAST of Spo12383.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJR9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_176380 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 2.200e-88
Identity = 179/199 (89.95%), Postives = 185/199 (92.96%), Query Frame = 1


		  
Query: 1   MAMSMQVQALLSNSVGTFANGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVP 60
           MAMSMQVQALLSNSVG F NGS AYPLGFNPRM KRV+FGVKCMAEE AGGEPKL+S +P
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGSNAYPLGFNPRMCKRVSFGVKCMAEEKAGGEPKLNSGLP 60

Query: 61  KPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVE 120
           KPNP+ SS T     IPTPRPQPK VSTNFTDLFAFSGPAPERINGRLAMIGF+AAIAVE
Sbjct: 61  KPNPSVSSSTS----IPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFMAAIAVE 120

Query: 121 LSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180
           LSNGTDLFTQIS+GGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA
Sbjct: 121 LSNGTDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIA 180

Query: 181 MLGLVALAVTEIVKGGALV 200
           MLGLVALAVTEIVKGGALV
Sbjct: 181 MLGLVALAVTEIVKGGALV 195

[Close]

BLAST of Spo12383.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAF4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093280 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 7.100e-87
Identity = 178/200 (89.00%), Postives = 181/200 (90.50%), Query Frame = 1


		  
Query: 1   MAMSMQVQALLSNSVGTFANG-SKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSV 60
           MAMSMQVQALLSNSVG F NG SKAYPLGFNPRMAKRVNFGVKCMAEE  GGEPKLDS +
Sbjct: 1   MAMSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKVGGEPKLDSGL 60

Query: 61  PKPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120
           PKPNPT SS   +PT IPTPRPQPK VSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV
Sbjct: 61  PKPNPTVSS---SPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAV 120

Query: 121 ELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRI 180
           ELSNGTDLFTQIS GGSQWFLGTSIL S ASLVPLLQGSRAEAKT+GLMNANAELWNGRI
Sbjct: 121 ELSNGTDLFTQISGGGSQWFLGTSILFSAASLVPLLQGSRAEAKTEGLMNANAELWNGRI 180

Query: 181 AMLGLVALAVTEIVKGGALV 200
           AMLGLVALA TE V G ALV
Sbjct: 181 AMLGLVALAFTEFVTGSALV 197

[Close]

BLAST of Spo12383.1 vs. ExPASy Swiss-Prot
Match: ELIP1_ARATH (Early light-induced protein 1, chloroplastic OS=Arabidopsis thaliana GN=ELIP1 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.600e-44
Identity = 104/197 (52.79%), Postives = 138/197 (70.05%), Query Frame = 1


		  
Query: 4   SMQVQALLSNSVGTFA-NGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVPKP 63
           S  +Q++ +  + T   N +K +  G  P + +    GV+CMAE G    P  + S P P
Sbjct: 5   SFNMQSVFAGGLTTRKINTNKLFSAGSFPNLKRNYPVGVRCMAEGG----PTNEDSSPAP 64

Query: 64  NPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELS 123
           + +++ P P  +P P P  +PK VST F+DL AFSGPAPERINGRLAM+GFVAA+AVELS
Sbjct: 65  STSAAQPLPK-SPSPPPPMKPK-VSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELS 124

Query: 124 NGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAML 183
            G ++  QIS+GG  WFLGT+ +L++ASLVPL +G   E+K++G+M ++AELWNGR AML
Sbjct: 125 KGENVLAQISDGGVSWFLGTTAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAML 184

Query: 184 GLVALAVTEIVKGGALV 200
           GLVALA TE VKGG LV
Sbjct: 185 GLVALAFTEFVKGGTLV 195

[Close]

BLAST of Spo12383.1 vs. ExPASy Swiss-Prot
Match: ELIP2_ARATH (Early light-induced protein 2, chloroplastic OS=Arabidopsis thaliana GN=ELIP2 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.400e-42
Identity = 102/161 (63.35%), Postives = 123/161 (76.40%), Query Frame = 1


		  
Query: 40  GVKCMAEEGAGGEP-KLDSSVPKPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSG 99
           GV+CMA+    G+P K D SVP  + TS++P   P   P P  +PK VST F DL AFSG
Sbjct: 39  GVRCMAQ----GDPIKEDPSVPSTS-TSATPPQMPQSPPPPVSKPK-VSTKFGDLLAFSG 98

Query: 100 PAPERINGRLAMIGFVAAIAVELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGS 159
           PAPERINGRLAM+GFVAAIA+ELS G ++F QIS+GG  WFLGT+ LL++AS+VPL +G 
Sbjct: 99  PAPERINGRLAMVGFVAAIAMELSKGENVFAQISDGGVGWFLGTTALLTLASMVPLFKGI 158

Query: 160 RAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGALV 200
           RAEAK++G M ++AELWNGR AMLGLVALA TE V GG LV
Sbjct: 159 RAEAKSKGFMTSDAELWNGRFAMLGLVALAFTEYVTGGTLV 193

[Close]

BLAST of Spo12383.1 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.400e-42
Identity = 105/204 (51.47%), Postives = 138/204 (67.65%), Query Frame = 1


		  
Query: 1   MAMSMQVQALLSNSVGTFANGSKA-----YPLGFNPRMAKRVNFGVKCMAEEGAGGEPKL 60
           MA+S   Q+++SNS+   ++ S+       P  + P + + V+  V+ MAE    GEPK 
Sbjct: 1   MAVS-SCQSIMSNSMTNISSRSRVNQFTNIPSVYIPTLRRNVSLKVRSMAE----GEPKE 60

Query: 61  DSSVPKPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVA 120
            S V     T ++ TPTP P  T   +P  +ST F+DL AFSGPAPERINGRLAMIGFVA
Sbjct: 61  QSKVAVDPTTPTASTPTPQPAYT---RPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVA 120

Query: 121 AIAVELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELW 180
           A+ VE++ G  L  Q+S GG  WFLGTS+LLS+ASL+P  QG   E+K++ +M+++AE W
Sbjct: 121 AMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFW 180

Query: 181 NGRIAMLGLVALAVTEIVKGGALV 200
           NGRIAMLGLVALA TE VKG +LV
Sbjct: 181 NGRIAMLGLVALAFTEFVKGTSLV 196

[Close]

BLAST of Spo12383.1 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.600e-31
Identity = 72/118 (61.02%), Postives = 84/118 (71.19%), Query Frame = 1


		  
Query: 79  PRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFTQISNG-GSQ 138
           P P     ST+  D  AFSGPAPERINGRLAM+GFV A+AVE   G  L +Q+ +G G  
Sbjct: 44  PPPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQA 103

Query: 139 WFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKG 196
           WF  T  +LS+ASLVPLLQG  AE +   +MNANAELWNGR AM+GLVALA TEI+ G
Sbjct: 104 WFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITG 161

[Close]

BLAST of Spo12383.1 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.700e-31
Identity = 73/122 (59.84%), Postives = 85/122 (69.67%), Query Frame = 1


		  
Query: 79  PRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFTQISNG-GSQ 138
           P P     ST+  D  AFSGPAPERINGRLAM+GFV A+AVE   G  L +Q+ +G G  
Sbjct: 49  PPPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQA 108

Query: 139 WFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGA 198
           WF  T  +LS+ASLVPLLQG  AE +   +MNANAELWNGR AMLGLVALA TEI+ G  
Sbjct: 109 WFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAP 168

Query: 199 LV 200
            +
Sbjct: 169 FI 170

[Close]

BLAST of Spo12383.1 vs. TAIR (Arabidopsis)
Match: AT3G22840.1 (Chlorophyll A-B binding family protein)

HSP 1 Score: 180.6 bits (457), Expect = 9.200e-46
Identity = 104/197 (52.79%), Postives = 138/197 (70.05%), Query Frame = 1


		  
Query: 4   SMQVQALLSNSVGTFA-NGSKAYPLGFNPRMAKRVNFGVKCMAEEGAGGEPKLDSSVPKP 63
           S  +Q++ +  + T   N +K +  G  P + +    GV+CMAE G    P  + S P P
Sbjct: 5   SFNMQSVFAGGLTTRKINTNKLFSAGSFPNLKRNYPVGVRCMAEGG----PTNEDSSPAP 64

Query: 64  NPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELS 123
           + +++ P P  +P P P  +PK VST F+DL AFSGPAPERINGRLAM+GFVAA+AVELS
Sbjct: 65  STSAAQPLPK-SPSPPPPMKPK-VSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELS 124

Query: 124 NGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAML 183
            G ++  QIS+GG  WFLGT+ +L++ASLVPL +G   E+K++G+M ++AELWNGR AML
Sbjct: 125 KGENVLAQISDGGVSWFLGTTAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAML 184

Query: 184 GLVALAVTEIVKGGALV 200
           GLVALA TE VKGG LV
Sbjct: 185 GLVALAFTEFVKGGTLV 195

[Close]

BLAST of Spo12383.1 vs. TAIR (Arabidopsis)
Match: AT4G14690.1 (Chlorophyll A-B binding family protein)

HSP 1 Score: 172.9 bits (437), Expect = 1.900e-43
Identity = 102/161 (63.35%), Postives = 123/161 (76.40%), Query Frame = 1


		  
Query: 40  GVKCMAEEGAGGEP-KLDSSVPKPNPTSSSPTPTPTPIPTPRPQPKTVSTNFTDLFAFSG 99
           GV+CMA+    G+P K D SVP  + TS++P   P   P P  +PK VST F DL AFSG
Sbjct: 39  GVRCMAQ----GDPIKEDPSVPSTS-TSATPPQMPQSPPPPVSKPK-VSTKFGDLLAFSG 98

Query: 100 PAPERINGRLAMIGFVAAIAVELSNGTDLFTQISNGGSQWFLGTSILLSVASLVPLLQGS 159
           PAPERINGRLAM+GFVAAIA+ELS G ++F QIS+GG  WFLGT+ LL++AS+VPL +G 
Sbjct: 99  PAPERINGRLAMVGFVAAIAMELSKGENVFAQISDGGVGWFLGTTALLTLASMVPLFKGI 158

Query: 160 RAEAKTQGLMNANAELWNGRIAMLGLVALAVTEIVKGGALV 200
           RAEAK++G M ++AELWNGR AMLGLVALA TE V GG LV
Sbjct: 159 RAEAKSKGFMTSDAELWNGRFAMLGLVALAFTEYVTGGTLV 193

The following BLAST results are available for this feature:

BLAST of Spo12383.1 vs. NCBI nr
BLAST of Spo12383.1 vs. UniProtKB/TrEMBL
BLAST of Spo12383.1 vs. ExPASy Swiss-Prot
BLAST of Spo12383.1 vs. TAIR (Arabidopsis)

BLAST of Spo12383.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902194451\|gb\|KNA12559.1\|	1.0e-99	98.4	hypothetical protein SOVF_1249...	[more]
gi\|902150947\|gb\|KNA05469.1\|	2.3e-91	93.5	hypothetical protein SOVF_1900...	[more]
gi\|902202340\|gb\|KNA14240.1\|	4.0e-91	93.4	hypothetical protein SOVF_1093...	[more]
gi\|902164229\|gb\|KNA06948.1\|	3.2e-88	89.9	hypothetical protein SOVF_1763...	[more]
gi\|902208596\|gb\|KNA15989.1\|	1.0e-86	89.0	hypothetical protein SOVF_0932...	[more]

BLAST of Spo12383.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QZ64_SPIOL	7.3e-100	98.4	Uncharacterized protein OS=Spi...	[more]
A0A0K9QDX3_SPIOL	1.6e-91	93.5	Uncharacterized protein OS=Spi...	[more]
A0A0K9R401_SPIOL	2.8e-91	93.4	Uncharacterized protein OS=Spi...	[more]
A0A0K9QJR9_SPIOL	2.2e-88	89.9	Uncharacterized protein OS=Spi...	[more]
A0A0K9RAF4_SPIOL	7.1e-87	89.0	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo12383.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ELIP1_ARATH	1.6e-44	52.7	Early light-induced protein 1,...	[more]
ELIP2_ARATH	3.4e-42	63.3	Early light-induced protein 2,...	[more]
ELI_PEA	3.4e-42	51.4	Early light-induced protein, c...	[more]
ELI6_HORVU	1.6e-31	61.0	Low molecular mass early light...	[more]
ELI9_HORVU	2.7e-31	59.8	Low molecular mass early light...	[more]

BLAST of Spo12383.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G22840.1	9.2e-46	52.7	Chlorophyll A-B binding family...	[more]
AT4G14690.1	1.9e-43	63.3	Chlorophyll A-B binding family...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 100..151 score: 3.
IPR023329	Chlorophyll a/b binding protein domain	unknown	SSF103511	Chlorophyll a-b binding protein	coord: 79..195 score: 3.4
None	No IPR available	GENE3D	1.20.1620.10		coord: 170..197 score: 1.3E-4coord: 101..162 score: 3.
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 36..199 score: 1.6
None	No IPR available	PANTHER	PTHR14154:SF5	EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 36..199 score: 1.6