Spo12386.1 (mRNA) | SpinachBase

Overview


Name	Spo12386.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Early light-induced protein, putative
Location	chr6 : 37256114 .. 37256701 (+)
Sequence length	588

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTATGCAAGTTCAAGCCCTTCTTTCCAACTCTGTTGGTGCCTTCTCTACTGGCAGCTCCAAGGCGTATCCAGTTGGGTTCAATCCTCGTATAGCTAAACGCGTCAATTTCGGAGTGAAGTGTATGGCGGAGGAGAAGGTTGGAGGTGAACCAAAGCTCGACTCCGGTTTACCAAAGCCAAACCCCACTGTATTGTCTTCACCCACCTCGATCCCAACACCTAGACCACAACCAAAGAAGGTCAGCACAAACTTCACAGACTTGTTTGCCTTTAGCGGCCCTGCACCGGAAAGGATCAACGGCCGCCTAGCCATGATCGGGTTCGTGGCCGCAATAGCCGTAGAGCTATCTAACGGCACTGACCTATTTTCTCAAATATCCGGCAGTGGATCACAATGGTTCCTCGGAACAAGCATCCTTTTTTCGGCAGCATCATTGGTGCCATTGCTCCAAGGAAGCCGACCAGAAGCTAAAACTGAAGGGTTAATGAATGCCAACGCCGAGCTATGGAATGGTAGGATTGCTATGTTAGGCCTTGTAGCCTTGGCTTTCACTGAGTTTGTTACCGGTAGTGCGCTTGTTTAA

mRNA sequence

ATGTCTATGCAAGTTCAAGCCCTTCTTTCCAACTCTGTTGGTGCCTTCTCTACTGGCAGCTCCAAGGCGTATCCAGTTGGGTTCAATCCTCGTATAGCTAAACGCGTCAATTTCGGAGTGAAGTGTATGGCGGAGGAGAAGGTTGGAGGTGAACCAAAGCTCGACTCCGGTTTACCAAAGCCAAACCCCACTGTATTGTCTTCACCCACCTCGATCCCAACACCTAGACCACAACCAAAGAAGGTCAGCACAAACTTCACAGACTTGTTTGCCTTTAGCGGCCCTGCACCGGAAAGGATCAACGGCCGCCTAGCCATGATCGGGTTCGTGGCCGCAATAGCCGTAGAGCTATCTAACGGCACTGACCTATTTTCTCAAATATCCGGCAGTGGATCACAATGGTTCCTCGGAACAAGCATCCTTTTTTCGGCAGCATCATTGGTGCCATTGCTCCAAGGAAGCCGACCAGAAGCTAAAACTGAAGGGTTAATGAATGCCAACGCCGAGCTATGGAATGGTAGGATTGCTATGTTAGGCCTTGTAGCCTTGGCTTTCACTGAGTTTGTTACCGGTAGTGCGCTTGTTTAA

Coding sequence (CDS)

ATGTCTATGCAAGTTCAAGCCCTTCTTTCCAACTCTGTTGGTGCCTTCTCTACTGGCAGCTCCAAGGCGTATCCAGTTGGGTTCAATCCTCGTATAGCTAAACGCGTCAATTTCGGAGTGAAGTGTATGGCGGAGGAGAAGGTTGGAGGTGAACCAAAGCTCGACTCCGGTTTACCAAAGCCAAACCCCACTGTATTGTCTTCACCCACCTCGATCCCAACACCTAGACCACAACCAAAGAAGGTCAGCACAAACTTCACAGACTTGTTTGCCTTTAGCGGCCCTGCACCGGAAAGGATCAACGGCCGCCTAGCCATGATCGGGTTCGTGGCCGCAATAGCCGTAGAGCTATCTAACGGCACTGACCTATTTTCTCAAATATCCGGCAGTGGATCACAATGGTTCCTCGGAACAAGCATCCTTTTTTCGGCAGCATCATTGGTGCCATTGCTCCAAGGAAGCCGACCAGAAGCTAAAACTGAAGGGTTAATGAATGCCAACGCCGAGCTATGGAATGGTAGGATTGCTATGTTAGGCCTTGTAGCCTTGGCTTTCACTGAGTTTGTTACCGGTAGTGCGCTTGTTTAA

Protein sequence

MSMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPKPNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGLVALAFTEFVTGSALV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo12386	Spo12386	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo12386.1	Spo12386.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12386.1.exon.1	Spo12386.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12386.1.CDS.1	Spo12386.1.CDS.1	CDS

Homology

[Close]

BLAST of Spo12386.1 vs. NCBI nr
Match: gi|902169663|gb|KNA07688.1| (hypothetical protein SOVF_169540 [Spinacia oleracea])

HSP 1 Score: 375.9 bits (964), Expect = 4.200e-101
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 1


		  
Query: 1   MSMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPK 60
           MSMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPK
Sbjct: 3   MSMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPK 62

Query: 61  PNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 120
           PNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG
Sbjct: 63  PNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 122

Query: 121 TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL 180
           TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL
Sbjct: 123 TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL 182

Query: 181 VALAFTEFVTGSALV 196
           VALAFTEFVTGSALV
Sbjct: 183 VALAFTEFVTGSALV 197

[Close]

BLAST of Spo12386.1 vs. NCBI nr
Match: gi|902208596|gb|KNA15989.1| (hypothetical protein SOVF_093280 [Spinacia oleracea])

HSP 1 Score: 361.3 bits (926), Expect = 1.100e-96
Identity = 186/195 (95.38%), Postives = 191/195 (97.95%), Query Frame = 1


		  
Query: 1   MSMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPK 60
           MSMQVQALLSNSVGAF+ G+SKAYP+GFNPR+AKRVNFGVKCMAEEKVGGEPKLDSGLPK
Sbjct: 3   MSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKVGGEPKLDSGLPK 62

Query: 61  PNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 120
           PNPTV SSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG
Sbjct: 63  PNPTVSSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 122

Query: 121 TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL 180
           TDLF+QISG GSQWFLGTSILFSAASLVPLLQGSR EAKTEGLMNANAELWNGRIAMLGL
Sbjct: 123 TDLFTQISGGGSQWFLGTSILFSAASLVPLLQGSRAEAKTEGLMNANAELWNGRIAMLGL 182

Query: 181 VALAFTEFVTGSALV 196
           VALAFTEFVTGSALV
Sbjct: 183 VALAFTEFVTGSALV 197

[Close]

BLAST of Spo12386.1 vs. NCBI nr
Match: gi|902150947|gb|KNA05469.1| (hypothetical protein SOVF_190050 [Spinacia oleracea])

HSP 1 Score: 333.6 bits (854), Expect = 2.400e-88
Identity = 174/195 (89.23%), Postives = 181/195 (92.82%), Query Frame = 1


		  
Query: 1   MSMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPK 60
           MSMQVQALLSNSVGAF+ G+SKAYP+GFNPR+AKRVNFGVKCMAEEK GGEPKLDSG+PK
Sbjct: 3   MSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGVPK 62

Query: 61  PNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 120
           PNPTV SSPT IPTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGFVAAIAVELSNG
Sbjct: 63  PNPTV-SSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 122

Query: 121 TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL 180
           TDLF+QIS  GSQWFLGTSIL S ASLVPLLQGSR EAKT+GLMNANAELWNGRIAMLGL
Sbjct: 123 TDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGL 182

Query: 181 VALAFTEFVTGSALV 196
           VALA TE V G ALV
Sbjct: 183 VALAVTEIVKGGALV 196

[Close]

BLAST of Spo12386.1 vs. NCBI nr
Match: gi|902164229|gb|KNA06948.1| (hypothetical protein SOVF_176380 [Spinacia oleracea])

HSP 1 Score: 321.2 bits (822), Expect = 1.200e-84
Identity = 170/195 (87.18%), Postives = 180/195 (92.31%), Query Frame = 1


		  
Query: 1   MSMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPK 60
           MSMQVQALLSNSVGAF+ GS+ AYP+GFNPR+ KRV+FGVKCMAEEK GGEPKL+SGLPK
Sbjct: 3   MSMQVQALLSNSVGAFTNGSN-AYPLGFNPRMCKRVSFGVKCMAEEKAGGEPKLNSGLPK 62

Query: 61  PNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 120
           PNP+V SS TSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGF+AAIAVELSNG
Sbjct: 63  PNPSV-SSSTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFMAAIAVELSNG 122

Query: 121 TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL 180
           TDLF+QIS  GSQWFLGTSIL S ASLVPLLQGSR EAKT+GLMNANAELWNGRIAMLGL
Sbjct: 123 TDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGL 182

Query: 181 VALAFTEFVTGSALV 196
           VALA TE V G ALV
Sbjct: 183 VALAVTEIVKGGALV 195

[Close]

BLAST of Spo12386.1 vs. NCBI nr
Match: gi|902202340|gb|KNA14240.1| (hypothetical protein SOVF_109350 [Spinacia oleracea])

HSP 1 Score: 317.8 bits (813), Expect = 1.300e-83
Identity = 171/195 (87.69%), Postives = 178/195 (91.28%), Query Frame = 1


		  
Query: 1   MSMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPK 60
           MSMQVQAL+SNSVGAF+ GS KAYP+GFNPR+AKRVNFGVKCMAE   GGEPKLDSG+PK
Sbjct: 3   MSMQVQALVSNSVGAFTNGS-KAYPLGFNPRMAKRVNFGVKCMAEG-AGGEPKLDSGVPK 62

Query: 61  PNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 120
            NPTV SSPT IPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG
Sbjct: 63  SNPTV-SSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 122

Query: 121 TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL 180
           TDLF+QIS  GSQWFLGTSIL S ASLVPLLQGSR EAKT+GLMNANAELWNGRIAMLGL
Sbjct: 123 TDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGL 182

Query: 181 VALAFTEFVTGSALV 196
           VALA TE V G ALV
Sbjct: 183 VALAVTEIVKGGALV 194

[Close]

BLAST of Spo12386.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLY3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_169540 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 2.900e-101
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 1


		  
Query: 1   MSMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPK 60
           MSMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPK
Sbjct: 3   MSMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPK 62

Query: 61  PNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 120
           PNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG
Sbjct: 63  PNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 122

Query: 121 TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL 180
           TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL
Sbjct: 123 TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL 182

Query: 181 VALAFTEFVTGSALV 196
           VALAFTEFVTGSALV
Sbjct: 183 VALAFTEFVTGSALV 197

[Close]

BLAST of Spo12386.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAF4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093280 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 7.400e-97
Identity = 186/195 (95.38%), Postives = 191/195 (97.95%), Query Frame = 1


		  
Query: 1   MSMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPK 60
           MSMQVQALLSNSVGAF+ G+SKAYP+GFNPR+AKRVNFGVKCMAEEKVGGEPKLDSGLPK
Sbjct: 3   MSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKVGGEPKLDSGLPK 62

Query: 61  PNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 120
           PNPTV SSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG
Sbjct: 63  PNPTVSSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 122

Query: 121 TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL 180
           TDLF+QISG GSQWFLGTSILFSAASLVPLLQGSR EAKTEGLMNANAELWNGRIAMLGL
Sbjct: 123 TDLFTQISGGGSQWFLGTSILFSAASLVPLLQGSRAEAKTEGLMNANAELWNGRIAMLGL 182

Query: 181 VALAFTEFVTGSALV 196
           VALAFTEFVTGSALV
Sbjct: 183 VALAFTEFVTGSALV 197

[Close]

BLAST of Spo12386.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDX3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_190050 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.600e-88
Identity = 174/195 (89.23%), Postives = 181/195 (92.82%), Query Frame = 1


		  
Query: 1   MSMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPK 60
           MSMQVQALLSNSVGAF+ G+SKAYP+GFNPR+AKRVNFGVKCMAEEK GGEPKLDSG+PK
Sbjct: 3   MSMQVQALLSNSVGAFTNGTSKAYPLGFNPRMAKRVNFGVKCMAEEKAGGEPKLDSGVPK 62

Query: 61  PNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 120
           PNPTV SSPT IPTPRPQPKKVSTNF DLFAFSGPAPERINGRLAMIGFVAAIAVELSNG
Sbjct: 63  PNPTV-SSPTPIPTPRPQPKKVSTNFRDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 122

Query: 121 TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL 180
           TDLF+QIS  GSQWFLGTSIL S ASLVPLLQGSR EAKT+GLMNANAELWNGRIAMLGL
Sbjct: 123 TDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGL 182

Query: 181 VALAFTEFVTGSALV 196
           VALA TE V G ALV
Sbjct: 183 VALAVTEIVKGGALV 196

[Close]

BLAST of Spo12386.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJR9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_176380 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 8.500e-85
Identity = 170/195 (87.18%), Postives = 180/195 (92.31%), Query Frame = 1


		  
Query: 1   MSMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPK 60
           MSMQVQALLSNSVGAF+ GS+ AYP+GFNPR+ KRV+FGVKCMAEEK GGEPKL+SGLPK
Sbjct: 3   MSMQVQALLSNSVGAFTNGSN-AYPLGFNPRMCKRVSFGVKCMAEEKAGGEPKLNSGLPK 62

Query: 61  PNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 120
           PNP+V SS TSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGF+AAIAVELSNG
Sbjct: 63  PNPSV-SSSTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFMAAIAVELSNG 122

Query: 121 TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL 180
           TDLF+QIS  GSQWFLGTSIL S ASLVPLLQGSR EAKT+GLMNANAELWNGRIAMLGL
Sbjct: 123 TDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGL 182

Query: 181 VALAFTEFVTGSALV 196
           VALA TE V G ALV
Sbjct: 183 VALAVTEIVKGGALV 195

[Close]

BLAST of Spo12386.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R401_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_109350 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 9.400e-84
Identity = 171/195 (87.69%), Postives = 178/195 (91.28%), Query Frame = 1


		  
Query: 1   MSMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPK 60
           MSMQVQAL+SNSVGAF+ GS KAYP+GFNPR+AKRVNFGVKCMAE   GGEPKLDSG+PK
Sbjct: 3   MSMQVQALVSNSVGAFTNGS-KAYPLGFNPRMAKRVNFGVKCMAEG-AGGEPKLDSGVPK 62

Query: 61  PNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 120
            NPTV SSPT IPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG
Sbjct: 63  SNPTV-SSPTPIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 122

Query: 121 TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL 180
           TDLF+QIS  GSQWFLGTSIL S ASLVPLLQGSR EAKT+GLMNANAELWNGRIAMLGL
Sbjct: 123 TDLFTQISDGGSQWFLGTSILLSVASLVPLLQGSRAEAKTQGLMNANAELWNGRIAMLGL 182

Query: 181 VALAFTEFVTGSALV 196
           VALA TE V G ALV
Sbjct: 183 VALAVTEIVKGGALV 194

[Close]

BLAST of Spo12386.1 vs. ExPASy Swiss-Prot
Match: ELIP1_ARATH (Early light-induced protein 1, chloroplastic OS=Arabidopsis thaliana GN=ELIP1 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.800e-43
Identity = 97/195 (49.74%), Postives = 128/195 (65.64%), Query Frame = 1


		  
Query: 2   SMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPKP 61
           S  +Q++ +  +      ++K +  G  P + +    GV+CMAE    G P  +   P P
Sbjct: 5   SFNMQSVFAGGLTTRKINTNKLFSAGSFPNLKRNYPVGVRCMAE----GGPTNEDSSPAP 64

Query: 62  NPTVLSSPTSIPTPRPQPK-KVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 121
           + +        P+P P  K KVST F+DL AFSGPAPERINGRLAM+GFVAA+AVELS G
Sbjct: 65  STSAAQPLPKSPSPPPPMKPKVSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELSKG 124

Query: 122 TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL 181
            ++ +QIS  G  WFLGT+ + + ASLVPL +G   E+K++G+M ++AELWNGR AMLGL
Sbjct: 125 ENVLAQISDGGVSWFLGTTAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAMLGL 184

Query: 182 VALAFTEFVTGSALV 196
           VALAFTEFV G  LV
Sbjct: 185 VALAFTEFVKGGTLV 195

[Close]

BLAST of Spo12386.1 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.000e-42
Identity = 103/197 (52.28%), Postives = 136/197 (69.04%), Query Frame = 1


		  
Query: 6   QALLSNSVGAFSTGSS----KAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPKP 65
           Q+++SNS+   S+ S        P  + P + + V+  V+ MAE    GEPK  S +   
Sbjct: 7   QSIMSNSMTNISSRSRVNQFTNIPSVYIPTLRRNVSLKVRSMAE----GEPKEQSKVAV- 66

Query: 66  NPTVLSSPTSIPTPRP---QPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELS 125
           +PT  ++ T  PTP+P   +P K+ST F+DL AFSGPAPERINGRLAMIGFVAA+ VE++
Sbjct: 67  DPTTPTAST--PTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIA 126

Query: 126 NGTDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAML 185
            G  L  Q+SG G  WFLGTS+L S ASL+P  QG   E+K++ +M+++AE WNGRIAML
Sbjct: 127 KGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAML 186

Query: 186 GLVALAFTEFVTGSALV 196
           GLVALAFTEFV G++LV
Sbjct: 187 GLVALAFTEFVKGTSLV 196

[Close]

BLAST of Spo12386.1 vs. ExPASy Swiss-Prot
Match: ELIP2_ARATH (Early light-induced protein 2, chloroplastic OS=Arabidopsis thaliana GN=ELIP2 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.700e-41
Identity = 102/195 (52.31%), Postives = 131/195 (67.18%), Query Frame = 1


		  
Query: 2   SMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAE-EKVGGEPKLDSGLPK 61
           S  +Q++ +   G  +T + +     F  RIA     GV+CMA+ + +  +P + S    
Sbjct: 5   SFNMQSVFAAPSGVLTTRNIRNTNQLFFKRIAP---VGVRCMAQGDPIKEDPSVPSTSTS 64

Query: 62  PNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 121
             P  +  P S P P  +PK VST F DL AFSGPAPERINGRLAM+GFVAAIA+ELS G
Sbjct: 65  ATPPQM--PQSPPPPVSKPK-VSTKFGDLLAFSGPAPERINGRLAMVGFVAAIAMELSKG 124

Query: 122 TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL 181
            ++F+QIS  G  WFLGT+ L + AS+VPL +G R EAK++G M ++AELWNGR AMLGL
Sbjct: 125 ENVFAQISDGGVGWFLGTTALLTLASMVPLFKGIRAEAKSKGFMTSDAELWNGRFAMLGL 184

Query: 182 VALAFTEFVTGSALV 196
           VALAFTE+VTG  LV
Sbjct: 185 VALAFTEYVTGGTLV 193

[Close]

BLAST of Spo12386.1 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.200e-35
Identity = 86/168 (51.19%), Postives = 108/168 (64.29%), Query Frame = 1


		  
Query: 31  RIAKRVNFGVKCMAEEKVGGEPKLDSGLPKPNPTVLSSPTSIPT-PRPQPKKVSTNFTDL 90
           R+   VN  V    +     E    S  P P+     SPT+IP  P+P  KK + +  D 
Sbjct: 62  RLDLTVNLFVYVQPDMDSAKETTSASTSPSPSQYTSPSPTTIPAAPKPVTKKANPSVWDA 121

Query: 91  FAFSGPAPERINGRLAMIGFVAAIAVELSNGTDLFSQIS--GSGSQWFLGTSILFSAASL 150
            AFSGPAPERINGRLAM+GFVAA++VE + G  L  Q+    SG  WFL T+ +FS ASL
Sbjct: 122 LAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASL 181

Query: 151 VPLLQGSRPEAKTEGLMNANAELWNGRIAMLGLVALAFTEFVTGSALV 196
           +PLLQG   E+K+ G+ +A+AELWNGR AMLGLVALA TEF+TG+  V
Sbjct: 182 LPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFV 229

[Close]

BLAST of Spo12386.1 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 7.000e-32
Identity = 77/133 (57.89%), Postives = 91/133 (68.42%), Query Frame = 1


		  
Query: 65  VLSSPTSIPT-PRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNGTDL 124
           V+ + T  P+ P P   K ST+  D  AFSGPAPERINGRLAM+GFV A+AVE   G  L
Sbjct: 38  VVRAQTEGPSAPPPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGL 97

Query: 125 FSQI-SGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGLVA 184
            SQ+ SG+G  WF  T  + S ASLVPLLQG   E +   +MNANAELWNGR AMLGLVA
Sbjct: 98  LSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVA 157

Query: 185 LAFTEFVTGSALV 196
           LA TE +TG+  +
Sbjct: 158 LAATEIITGAPFI 170

[Close]

BLAST of Spo12386.1 vs. TAIR (Arabidopsis)
Match: AT3G22840.1 (Chlorophyll A-B binding family protein)

HSP 1 Score: 177.2 bits (448), Expect = 1.000e-44
Identity = 97/195 (49.74%), Postives = 128/195 (65.64%), Query Frame = 1


		  
Query: 2   SMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAEEKVGGEPKLDSGLPKP 61
           S  +Q++ +  +      ++K +  G  P + +    GV+CMAE    G P  +   P P
Sbjct: 5   SFNMQSVFAGGLTTRKINTNKLFSAGSFPNLKRNYPVGVRCMAE----GGPTNEDSSPAP 64

Query: 62  NPTVLSSPTSIPTPRPQPK-KVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 121
           + +        P+P P  K KVST F+DL AFSGPAPERINGRLAM+GFVAA+AVELS G
Sbjct: 65  STSAAQPLPKSPSPPPPMKPKVSTKFSDLLAFSGPAPERINGRLAMVGFVAALAVELSKG 124

Query: 122 TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL 181
            ++ +QIS  G  WFLGT+ + + ASLVPL +G   E+K++G+M ++AELWNGR AMLGL
Sbjct: 125 ENVLAQISDGGVSWFLGTTAILTLASLVPLFKGISVESKSKGIMTSDAELWNGRFAMLGL 184

Query: 182 VALAFTEFVTGSALV 196
           VALAFTEFV G  LV
Sbjct: 185 VALAFTEFVKGGTLV 195

[Close]

BLAST of Spo12386.1 vs. TAIR (Arabidopsis)
Match: AT4G14690.1 (Chlorophyll A-B binding family protein)

HSP 1 Score: 170.6 bits (431), Expect = 9.400e-43
Identity = 102/195 (52.31%), Postives = 131/195 (67.18%), Query Frame = 1


		  
Query: 2   SMQVQALLSNSVGAFSTGSSKAYPVGFNPRIAKRVNFGVKCMAE-EKVGGEPKLDSGLPK 61
           S  +Q++ +   G  +T + +     F  RIA     GV+CMA+ + +  +P + S    
Sbjct: 5   SFNMQSVFAAPSGVLTTRNIRNTNQLFFKRIAP---VGVRCMAQGDPIKEDPSVPSTSTS 64

Query: 62  PNPTVLSSPTSIPTPRPQPKKVSTNFTDLFAFSGPAPERINGRLAMIGFVAAIAVELSNG 121
             P  +  P S P P  +PK VST F DL AFSGPAPERINGRLAM+GFVAAIA+ELS G
Sbjct: 65  ATPPQM--PQSPPPPVSKPK-VSTKFGDLLAFSGPAPERINGRLAMVGFVAAIAMELSKG 124

Query: 122 TDLFSQISGSGSQWFLGTSILFSAASLVPLLQGSRPEAKTEGLMNANAELWNGRIAMLGL 181
            ++F+QIS  G  WFLGT+ L + AS+VPL +G R EAK++G M ++AELWNGR AMLGL
Sbjct: 125 ENVFAQISDGGVGWFLGTTALLTLASMVPLFKGIRAEAKSKGFMTSDAELWNGRFAMLGL 184

Query: 182 VALAFTEFVTGSALV 196
           VALAFTE+VTG  LV
Sbjct: 185 VALAFTEYVTGGTLV 193

The following BLAST results are available for this feature:

BLAST of Spo12386.1 vs. NCBI nr
BLAST of Spo12386.1 vs. UniProtKB/TrEMBL
BLAST of Spo12386.1 vs. ExPASy Swiss-Prot
BLAST of Spo12386.1 vs. TAIR (Arabidopsis)

BLAST of Spo12386.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902169663\|gb\|KNA07688.1\|	4.2e-101	100.	hypothetical protein SOVF_1695...	[more]
gi\|902208596\|gb\|KNA15989.1\|	1.1e-96	95.3	hypothetical protein SOVF_0932...	[more]
gi\|902150947\|gb\|KNA05469.1\|	2.4e-88	89.2	hypothetical protein SOVF_1900...	[more]
gi\|902164229\|gb\|KNA06948.1\|	1.2e-84	87.1	hypothetical protein SOVF_1763...	[more]
gi\|902202340\|gb\|KNA14240.1\|	1.3e-83	87.6	hypothetical protein SOVF_1093...	[more]

BLAST of Spo12386.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QLY3_SPIOL	2.9e-101	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9RAF4_SPIOL	7.4e-97	95.3	Uncharacterized protein OS=Spi...	[more]
A0A0K9QDX3_SPIOL	1.6e-88	89.2	Uncharacterized protein OS=Spi...	[more]
A0A0K9QJR9_SPIOL	8.5e-85	87.1	Uncharacterized protein OS=Spi...	[more]
A0A0K9R401_SPIOL	9.4e-84	87.6	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo12386.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ELIP1_ARATH	1.8e-43	49.7	Early light-induced protein 1,...	[more]
ELI_PEA	2.0e-42	52.2	Early light-induced protein, c...	[more]
ELIP2_ARATH	1.7e-41	52.3	Early light-induced protein 2,...	[more]
ELI5_HORVU	5.2e-35	51.1	High molecular mass early ligh...	[more]
ELI9_HORVU	7.0e-32	57.8	Low molecular mass early light...	[more]

BLAST of Spo12386.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G22840.1	1.0e-44	49.7	Chlorophyll A-B binding family...	[more]
AT4G14690.1	9.4e-43	52.3	Chlorophyll A-B binding family...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 96..135 score: 5.
IPR023329	Chlorophyll a/b binding protein domain	unknown	SSF103511	Chlorophyll a-b binding protein	coord: 78..192 score: 4.45
None	No IPR available	GENE3D	1.20.1620.10		coord: 97..151 score: 3.5E-4coord: 166..194 score: 2.
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 67..195 score: 4.5
None	No IPR available	PANTHER	PTHR14154:SF5	EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 67..195 score: 4.5