Spo12483.1 (mRNA) | SpinachBase

Overview


Name	Spo12483.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	MYB-like transcription factor family protein
Location	SpoScf_01654 : 102637 .. 105101 (-)
Sequence length	2164

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGACTACTGTCCCATAGATTCTCCGAGTCAGTTTGTTTGTTTGGGCTCAACGCCTCAACTCAAGTAGAAGAGAGGGTGGCCTACCAATACCAATACCAATACCAATACCAATACCAATACCAATACCATTCCATCATTTCGTGACTGAAAATAACTTTGGTAACCCAATCAAAACGACGAAAGGGTACACATCACCTTTTTTGTAAGGGTAACAACCTTACAAATTTAGCACCATATGCCCTTATTATTAAGGTCCCCCATCTTCTTGTTCTTGCTTTGATGCTCACCTCACTTTCTTATCCTGTTTTTTTCTCCCCTTCTTCTTCTCTCTTTCTCTCTCACTTATCAATTACCAATTATCATGCCCCCTCCCTTCCATTATTGCAATGCCCATTAAGGCACTGGCACTACTACTCCAAAAAACTCGAAAAAATCTCCCTAAAGAAAGAAACTATAGGCATTATTATATTGGGCAACAATGCCTAATTTAGCAAGTTGGAGTAGGGAGGAAGAGAAAGCGTTTGAGAACGCGATTGCAACGTATTCCATCGACCAATCAAATGAGGATGATTGGGATAAGGTTGCGGCCGTGGTTACTACCAAAACCATTGAAGAGATTAAGCAACACTATGAGTTACTAGTTGAGGATGTAGGTGCAATTGAGGCAGGGAAAGTGCCACTTCCTAAGTATGCAAGTGAGGAAACTAATCATCATAATAATAGTAGTAATAATAATGGTACATTATTGTCAACTTCCACCACTAGTAAGGATGATCATAGCCCTTCGTTTTCAAAGGAACAAAAGGGTAACTCTAATCAAGGAAATGGCTACTCTGCTTTTGGTCCTTCCTCAATGGGAAATAGCACTAAAGCTAGCTCTAAATTGGAACAAGAGCGTAAAAAAGGCATCCCATGGACTGAAGAAGAGCATAGGTAATGCTATTCATTTTTGTATTTATTGATTTTCTTTTTTATGATTTTTTGTCAAAAACTACCTCTGAGCGACCCTTTATTCTAAAATCGACCCTTCAGACTACAAAAGGATTTTTAGGTGTTTTTGTTGCTCATAAAACACGACTAATTTGGAATCGAATTTTGATGATTCACGCTTTTTCGGGTGACAAATTGGTGTAGTTTAGACATTTGGTGCTAGATCTAACTCTAAGTCATTTATTATTTGCACAGCAACATCAAATATGAAGACTAATTCATGCTATAATCCCCTGTTTTTCAGGTTGTTTTTACTTGGACTTGACAAATTCGGGAAAGGCGATTGGCGAAGCATATCTAGGAACTTTGTGATAACAAGAACACCAACACAAGTAGCTAGCCATGCTCAAAAATATTTTATAAGGCTGAACTCAATGAATAGGGATAGAAGAAGATCTAGCATTCATGACATTACAAGTGTGAATGGAGGAGGATTATCACCAAATCAAGTACCAATTACAGGGCAACAAAACAATAATCCTGCGGCACCAGCAGTTGGAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAAATAAGCATAGGGCTCCGCCTAATGTAAATGTAAATATGGCAGCTGCAGGTATAGGAATGTATGGGACACAAATGGGCCACCCAATAAGTGCACCACCACCACCGCCTCATCATATGGTATCCGCTGTTGGGACTCCGGTTATGCTTCCTCCTCCTGGTCATCCTCATCATCACCACCACCATCACCACCCTCCTCATTATGCTGTTCCGGTTGCTTATCCTGTTCCGCCACCACCAATGCATCGATAACAGTCCCAAGGCCATGTCCGGCCTGTTGCAGTGTTGATGCTGAAACCCATAATAGGCAAGTGATCGGATCTTGGCTCATTGGTTAAGACCTCAATGTGATCGTTCGATCAGCATCTCCTTCGTGAATTTGACATCACTGATACAACCCTTGACTTCATATTTGGTATCTGGGTAGTTGTATCTTGAAGCAATTTCCAGAAGGAAGAGGTTCTCCGTTCTTCGGATGATAATTGGTTGCCCCTTTACCATTACCAAAAAAAAAAAAAAAACAACATAGAAAATTAGTGCTACTTTCCTTTTCAATGCAATTTGAAAATTAATGTTACACTTTATGTTTTGATGAAGCACTCACCTGCGAGAATAAATGATGAGTGATTCCTTCCACTTACCAAATATCCATCTGCAATCCTGCATTACCGCGATCTACAACACTTTTGTATAACCTGGATAGTTTGAGTTAATGATATACTTAAAGCTGTATTACTGAAGCATGCAATCATATACTAATCCAAGTATCATTTAAATTGATTAGGAATAGCAATAGCTATATTGCACTTTTAAGTAAACTAGTTTTAAACCCGTGCGATGCACAGAGCGCTCTATTATTTTGTAGTTTGAACAATAACCATCATACTCTCAACCAAGTATCATTTTAATTTTTGAATGTGACAAAATGTGTCACAAAAAACATACATA

mRNA sequence

TGACTACTGTCCCATAGATTCTCCGAGTCAGTTTGTTTGTTTGGGCTCAACGCCTCAACTCAAGTAGAAGAGAGGGTGGCCTACCAATACCAATACCAATACCAATACCAATACCAATACCAATACCATTCCATCATTTCGTGACTGAAAATAACTTTGGTAACCCAATCAAAACGACGAAAGGGTACACATCACCTTTTTTGTAAGGGTAACAACCTTACAAATTTAGCACCATATGCCCTTATTATTAAGGTCCCCCATCTTCTTGTTCTTGCTTTGATGCTCACCTCACTTTCTTATCCTGTTTTTTTCTCCCCTTCTTCTTCTCTCTTTCTCTCTCACTTATCAATTACCAATTATCATGCCCCCTCCCTTCCATTATTGCAATGCCCATTAAGGCACTGGCACTACTACTCCAAAAAACTCGAAAAAATCTCCCTAAAGAAAGAAACTATAGGCATTATTATATTGGGCAACAATGCCTAATTTAGCAAGTTGGAGTAGGGAGGAAGAGAAAGCGTTTGAGAACGCGATTGCAACGTATTCCATCGACCAATCAAATGAGGATGATTGGGATAAGGTTGCGGCCGTGGTTACTACCAAAACCATTGAAGAGATTAAGCAACACTATGAGTTACTAGTTGAGGATGTAGGTGCAATTGAGGCAGGGAAAGTGCCACTTCCTAAGTATGCAAGTGAGGAAACTAATCATCATAATAATAGTAGTAATAATAATGGTACATTATTGTCAACTTCCACCACTAGTAAGGATGATCATAGCCCTTCGTTTTCAAAGGAACAAAAGGGTAACTCTAATCAAGGAAATGGCTACTCTGCTTTTGGTCCTTCCTCAATGGGAAATAGCACTAAAGCTAGCTCTAAATTGGAACAAGAGCGTAAAAAAGGCATCCCATGGACTGAAGAAGAGCATAGGTTGTTTTTACTTGGACTTGACAAATTCGGGAAAGGCGATTGGCGAAGCATATCTAGGAACTTTGTGATAACAAGAACACCAACACAAGTAGCTAGCCATGCTCAAAAATATTTTATAAGGCTGAACTCAATGAATAGGGATAGAAGAAGATCTAGCATTCATGACATTACAAGTGTGAATGGAGGAGGATTATCACCAAATCAAGTACCAATTACAGGGCAACAAAACAATAATCCTGCGGCACCAGCAGTTGGAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAAATAAGCATAGGGCTCCGCCTAATGTAAATGTAAATATGGCAGCTGCAGGTATAGGAATGTATGGGACACAAATGGGCCACCCAATAAGTGCACCACCACCACCGCCTCATCATATGGTATCCGCTGTTGGGACTCCGGTTATGCTTCCTCCTCCTGGTCATCCTCATCATCACCACCACCATCACCACCCTCCTCATTATGCTGTTCCGGTTGCTTATCCTGTTCCGCCACCACCAATGCATCGATAACAGTCCCAAGGCCATGTCCGGCCTGTTGCAGTGTTGATGCTGAAACCCATAATAGGCAAGTGATCGGATCTTGGCTCATTGGTTAAGACCTCAATGTGATCGTTCGATCAGCATCTCCTTCGTGAATTTGACATCACTGATACAACCCTTGACTTCATATTTGGTATCTGGGTAGTTGTATCTTGAAGCAATTTCCAGAAGGAAGAGGTTCTCCGTTCTTCGGATGATAATTGGTTGCCCCTTTACCATTACCAAAAAAAAAAAAAAAACAACATAGAAAATTAGTGCTACTTTCCTTTTCAATGCAATTTGAAAATTAATGTTACACTTTATGTTTTGATGAAGCACTCACCTGCGAGAATAAATGATGAGTGATTCCTTCCACTTACCAAATATCCATCTGCAATCCTGCATTACCGCGATCTACAACACTTTTGTATAACCTGGATAGTTTGAGTTAATGATATACTTAAAGCTGTATTACTGAAGCATGCAATCATATACTAATCCAAGTATCATTTAAATTGATTAGGAATAGCAATAGCTATATTGCACTTTTAAGTAAACTAGTTTTAAACCCGTGCGATGCACAGAGCGCTCTATTATTTTGTAGTTTGAACAATAACCATCATACTCTCAACCAAGTATCATTTTAATTTTTGAATGTGACAAAATGTGTCACAAAAAACATACATA

Coding sequence (CDS)

ATGCCTAATTTAGCAAGTTGGAGTAGGGAGGAAGAGAAAGCGTTTGAGAACGCGATTGCAACGTATTCCATCGACCAATCAAATGAGGATGATTGGGATAAGGTTGCGGCCGTGGTTACTACCAAAACCATTGAAGAGATTAAGCAACACTATGAGTTACTAGTTGAGGATGTAGGTGCAATTGAGGCAGGGAAAGTGCCACTTCCTAAGTATGCAAGTGAGGAAACTAATCATCATAATAATAGTAGTAATAATAATGGTACATTATTGTCAACTTCCACCACTAGTAAGGATGATCATAGCCCTTCGTTTTCAAAGGAACAAAAGGGTAACTCTAATCAAGGAAATGGCTACTCTGCTTTTGGTCCTTCCTCAATGGGAAATAGCACTAAAGCTAGCTCTAAATTGGAACAAGAGCGTAAAAAAGGCATCCCATGGACTGAAGAAGAGCATAGGTTGTTTTTACTTGGACTTGACAAATTCGGGAAAGGCGATTGGCGAAGCATATCTAGGAACTTTGTGATAACAAGAACACCAACACAAGTAGCTAGCCATGCTCAAAAATATTTTATAAGGCTGAACTCAATGAATAGGGATAGAAGAAGATCTAGCATTCATGACATTACAAGTGTGAATGGAGGAGGATTATCACCAAATCAAGTACCAATTACAGGGCAACAAAACAATAATCCTGCGGCACCAGCAGTTGGAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAAATAAGCATAGGGCTCCGCCTAATGTAAATGTAAATATGGCAGCTGCAGGTATAGGAATGTATGGGACACAAATGGGCCACCCAATAAGTGCACCACCACCACCGCCTCATCATATGGTATCCGCTGTTGGGACTCCGGTTATGCTTCCTCCTCCTGGTCATCCTCATCATCACCACCACCATCACCACCCTCCTCATTATGCTGTTCCGGTTGCTTATCCTGTTCCGCCACCACCAATGCATCGATAA

Protein sequence

MPNLASWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGAIEAGKVPLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSAFGPSSMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNNNPAAPAVGTAAAAAAAAANKHRAPPNVNVNMAAAGIGMYGTQMGHPISAPPPPPHHMVSAVGTPVMLPPPGHPHHHHHHHHPPHYAVPVAYPVPPPPMHR

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo12483	Spo12483	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo12483.1	Spo12483.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12483.1.utr5p.1	Spo12483.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12483.1.CDS.2	Spo12483.1.CDS.2	CDS
Spo12483.1.CDS.1	Spo12483.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12483.1.utr3p.1	Spo12483.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12483.1.exon.2	Spo12483.1.exon.2	exon
Spo12483.1.exon.1	Spo12483.1.exon.1	exon

Homology

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BLAST of Spo12483.1 vs. NCBI nr
Match: gi|902195737|gb|KNA12939.1| (hypothetical protein SOVF_121600 [Spinacia oleracea])

HSP 1 Score: 636.7 bits (1641), Expect = 2.200e-179
Identity = 327/329 (99.39%), Postives = 327/329 (99.39%), Query Frame = 1


		  
Query: 1   MPNLASWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGA 60
           MPNLASWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGA
Sbjct: 1   MPNLASWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGA 60

Query: 61  IEAGKVPLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSA 120
           IEAGKVPLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSA
Sbjct: 61  IEAGKVPLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSA 120

Query: 121 FGPSSMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPT 180
           FGPSSMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPT
Sbjct: 121 FGPSSMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPT 180

Query: 181 QVASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNNNPAAPAVGTAA 240
           QVASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNNNPAAPAVGT  
Sbjct: 181 QVASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNNNPAAPAVGT-- 240

Query: 241 AAAAAAANKHRAPPNVNVNMAAAGIGMYGTQMGHPISAPPPPPHHMVSAVGTPVMLPPPG 300
           AAAAAAANKHRAPPNVNVNMAAAGIGMYGTQMGHPISAPPPPPHHMVSAVGTPVMLPPPG
Sbjct: 241 AAAAAAANKHRAPPNVNVNMAAAGIGMYGTQMGHPISAPPPPPHHMVSAVGTPVMLPPPG 300

Query: 301 HPHHHHHHHHPPHYAVPVAYPVPPPPMHR 330
           HPHHHHHHHHPPHYAVPVAYPVPPPPMHR
Sbjct: 301 HPHHHHHHHHPPHYAVPVAYPVPPPPMHR 327

[Close]

BLAST of Spo12483.1 vs. NCBI nr
Match: gi|731324906|ref|XP_010673224.1| (PREDICTED: transcription factor DIVARICATA [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 514.6 bits (1324), Expect = 1.300e-142
Identity = 274/331 (82.78%), Postives = 296/331 (89.43%), Query Frame = 1


		  
Query: 1   MPNLASWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGA 60
           MPNLA W+REEEKAFENAIA +SI++SN +DWDK+ ++V TK+IEEIKQH+E L+EDV A
Sbjct: 1   MPNLALWTREEEKAFENAIAIHSIEKSNNEDWDKIVSLVPTKSIEEIKQHFEYLIEDVSA 60

Query: 61  IEAGKVPLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSA 120
           IEAGKVPLPKY SEET   N  +N N TLLSTST  KDDH P FSK+Q+GNSNQGNGYSA
Sbjct: 61  IEAGKVPLPKYISEETTTTN--TNTNTTLLSTST--KDDHHPPFSKDQRGNSNQGNGYSA 120

Query: 121 FGPSSMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPT 180
           FGPS++G+STKASSKL+QERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPT
Sbjct: 121 FGPSAIGSSTKASSKLDQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPT 180

Query: 181 QVASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNNNPAAPAVGTAA 240
           QVASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQ PITGQQN+NPA PAVGTAA
Sbjct: 181 QVASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQAPITGQQNSNPATPAVGTAA 240

Query: 241 AAAAAAANKHRAPPNVNVNMAAAGIGMYGTQMGHPISAPPPPP--HHMVSAVGTPVMLPP 300
           AA+    NKHRAPPNVN  MAAAG+GMYGTQMGHP+SA P PP  HHM SAVGTPVMLPP
Sbjct: 241 AAS----NKHRAPPNVN--MAAAGMGMYGTQMGHPVSAAPMPPTAHHMASAVGTPVMLPP 300

Query: 301 PGHPHHHHHHHHPPHYAVPVAYPVPPPPMHR 330
           PGHPHH  HHH PPHYAVPVAYPVPPPPMHR
Sbjct: 301 PGHPHHLPHHH-PPHYAVPVAYPVPPPPMHR 320

[Close]

BLAST of Spo12483.1 vs. NCBI nr
Match: gi|255541820|ref|XP_002511974.1| (PREDICTED: transcription factor DIVARICATA [Ricinus communis])

HSP 1 Score: 339.0 bits (868), Expect = 9.500e-90
Identity = 197/330 (59.70%), Postives = 238/330 (72.12%), Query Frame = 1


		  
Query: 6   SWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGAIEAGK 65
           +WSREE+ AFENAIAT+ I+  +E+ W+K+A++V ++ IEE+KQHY LLVEDV AIEAG 
Sbjct: 7   TWSREEDIAFENAIATHWIEDDSEEQWEKIASMVPSRNIEELKQHYRLLVEDVDAIEAGN 66

Query: 66  VPLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDH--SPSFSKEQKGNSNQGNGYSAFGP 125
           VPLP Y  EET               TS++SKD H  S + + +++ N   G+G+   GP
Sbjct: 67  VPLPNYVGEET---------------TSSSSKDSHGFSGAVTTDKRLNCGFGSGFMGLGP 126

Query: 126 SSMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPTQVA 185
           +S G+  K  S+ +QER+KGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFV++RTPTQVA
Sbjct: 127 NSSGHGGKGGSRADQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVLSRTPTQVA 186

Query: 186 SHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNN-NPAA--PAVGTAA 245
           SHAQKYFIRLNSMNRDRRRSSIHDITSVN G +S +Q PITGQQ N NPAA  PA+G+A 
Sbjct: 187 SHAQKYFIRLNSMNRDRRRSSIHDITSVNNGEVSSHQAPITGQQGNTNPAAGAPAMGSAV 246

Query: 246 AAAAAAANKHRAPPNVNVNMAAAGIGMYGTQMGHPISAPPPPPHHMVSAVGTPVMLPPPG 305
                   KHRA  ++        IGMYG  +GHP++APP    HM SAVGTPVMLPPPG
Sbjct: 247 --------KHRAQHHM------PSIGMYGAPVGHPVAAPPG---HMASAVGTPVMLPPPG 297

Query: 306 HPHHHHHHHHPPHYAVPVAYPVPPP-PMHR 330
                 HH HPP Y +PVAYP+PPP  MH+
Sbjct: 307 ------HHPHPP-YVLPVAYPMPPPQTMHQ 297

[Close]

BLAST of Spo12483.1 vs. NCBI nr
Match: gi|470126530|ref|XP_004299236.1| (PREDICTED: transcription factor DIVARICATA [Fragaria vesca subsp. vesca])

HSP 1 Score: 339.0 bits (868), Expect = 9.500e-90
Identity = 196/326 (60.12%), Postives = 230/326 (70.55%), Query Frame = 1


		  
Query: 5   ASWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGAIEAG 64
           A+WSREE+KAFENAIA + I+   E  WDK+A++V TK++EE+K+HY++LV+DVGAIE+G
Sbjct: 5   AAWSREEDKAFENAIALHWIEDDEEGSWDKIASLVPTKSMEELKRHYQMLVDDVGAIESG 64

Query: 65  KVPLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSAFGPS 124
            +P+P Y  +E            T   +ST      S S  +    + N G G+SA G  
Sbjct: 65  NIPVPIYGGDEA----------ATTSVSSTARASSSSASDKRLSSSHGNNGGGFSALGHD 124

Query: 125 SMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPTQVAS 184
           S G+ +K  S+ EQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVI+RTPTQVAS
Sbjct: 125 SSGHGSKGGSRSEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVAS 184

Query: 185 HAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPN-QVPITGQQNNNPAAPAVGTAAAAA 244
           HAQKYFIRLNSMNRDRRRSSIHDITSVN GG  PN QVPITGQQ+N     A    AAA 
Sbjct: 185 HAQKYFIRLNSMNRDRRRSSIHDITSVNNGGDVPNHQVPITGQQSN-----AYAPGAAAI 244

Query: 245 AAAANKHRAPPNVNVNMAAAGIGMYGTQMGHPISAPPPPPHHMVSAVGTPVMLPPPGHPH 304
              + KHR P   ++    AG+GMYG  MGHP+SA   PP HM SAVGTPVMLP    P 
Sbjct: 245 GPPSVKHR-PHQPHM----AGLGMYGAPMGHPVSA---PPGHMASAVGTPVMLP----PG 303

Query: 305 HHHHHHHPPHYAVPVAYPVPPPPMHR 330
           HH HH HPP Y VPVAYP+  P MH+
Sbjct: 305 HHPHHAHPPPYVVPVAYPMAHPTMHQ 303

[Close]

BLAST of Spo12483.1 vs. NCBI nr
Match: gi|590664217|ref|XP_007036438.1| (Duplicated homeodomain-like superfamily protein [Theobroma cacao])

HSP 1 Score: 334.7 bits (857), Expect = 1.800e-88
Identity = 193/334 (57.78%), Postives = 234/334 (70.06%), Query Frame = 1


		  
Query: 1   MPNLASWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGA 60
           M    +WSRE EKAFENAIA +  ++ +E+ W+K+A++V +K++EE+KQHY+LLVEDV A
Sbjct: 1   MAGTGTWSREVEKAFENAIAMHWTEEGSEEQWEKIASMVPSKSLEELKQHYQLLVEDVSA 60

Query: 61  IEAGKVPLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPS-----FSKEQKGNSNQG 120
           IEAG+VPLP Y  EE               +TS+ +KD H  S      + +++ +S  G
Sbjct: 61  IEAGQVPLPSYTGEE---------------ATSSVAKDFHGSSGAAAAAAPDKRSSSGYG 120

Query: 121 NGYSAFGPSSMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVI 180
           NG+S     S G+  K SS+ +QER+KGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVI
Sbjct: 121 NGFSGLSHDSCGHGGKGSSRSDQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVI 180

Query: 181 TRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNNNPAAPA 240
           +RTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVN G  S +Q PITGQQ N  +   
Sbjct: 181 SRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDTS-HQAPITGQQANTNS--- 240

Query: 241 VGTAAAAAAAAANKHRAPPNVNVNMAAAGIGMYGTQMGHPISAPPPPPHHMVSAVGTPVM 300
              AAAAA   + KHRA P++       G+GMYG  +G P++A    P HM SAVGTPVM
Sbjct: 241 --PAAAAAMGPSVKHRAQPHM------PGLGMYGAPVGRPVAA----PGHMASAVGTPVM 296

Query: 301 LPPPGHPHHHHHHHHPPHYAVPVAYPVPPPPMHR 330
           LPP        HHHHPP Y VPVAYP+ PPPMH+
Sbjct: 301 LPP-------GHHHHPPPYIVPVAYPMAPPPMHQ 296

[Close]

BLAST of Spo12483.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1X8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_121600 PE=4 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 1.500e-179
Identity = 327/329 (99.39%), Postives = 327/329 (99.39%), Query Frame = 1


		  
Query: 1   MPNLASWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGA 60
           MPNLASWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGA
Sbjct: 1   MPNLASWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGA 60

Query: 61  IEAGKVPLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSA 120
           IEAGKVPLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSA
Sbjct: 61  IEAGKVPLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSA 120

Query: 121 FGPSSMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPT 180
           FGPSSMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPT
Sbjct: 121 FGPSSMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPT 180

Query: 181 QVASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNNNPAAPAVGTAA 240
           QVASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNNNPAAPAVGT  
Sbjct: 181 QVASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNNNPAAPAVGT-- 240

Query: 241 AAAAAAANKHRAPPNVNVNMAAAGIGMYGTQMGHPISAPPPPPHHMVSAVGTPVMLPPPG 300
           AAAAAAANKHRAPPNVNVNMAAAGIGMYGTQMGHPISAPPPPPHHMVSAVGTPVMLPPPG
Sbjct: 241 AAAAAAANKHRAPPNVNVNMAAAGIGMYGTQMGHPISAPPPPPHHMVSAVGTPVMLPPPG 300

Query: 301 HPHHHHHHHHPPHYAVPVAYPVPPPPMHR 330
           HPHHHHHHHHPPHYAVPVAYPVPPPPMHR
Sbjct: 301 HPHHHHHHHHPPHYAVPVAYPVPPPPMHR 327

[Close]

BLAST of Spo12483.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CME2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g064340 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 8.800e-143
Identity = 274/331 (82.78%), Postives = 296/331 (89.43%), Query Frame = 1


		  
Query: 1   MPNLASWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGA 60
           MPNLA W+REEEKAFENAIA +SI++SN +DWDK+ ++V TK+IEEIKQH+E L+EDV A
Sbjct: 1   MPNLALWTREEEKAFENAIAIHSIEKSNNEDWDKIVSLVPTKSIEEIKQHFEYLIEDVSA 60

Query: 61  IEAGKVPLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSA 120
           IEAGKVPLPKY SEET   N  +N N TLLSTST  KDDH P FSK+Q+GNSNQGNGYSA
Sbjct: 61  IEAGKVPLPKYISEETTTTN--TNTNTTLLSTST--KDDHHPPFSKDQRGNSNQGNGYSA 120

Query: 121 FGPSSMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPT 180
           FGPS++G+STKASSKL+QERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPT
Sbjct: 121 FGPSAIGSSTKASSKLDQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPT 180

Query: 181 QVASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNNNPAAPAVGTAA 240
           QVASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQ PITGQQN+NPA PAVGTAA
Sbjct: 181 QVASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQAPITGQQNSNPATPAVGTAA 240

Query: 241 AAAAAAANKHRAPPNVNVNMAAAGIGMYGTQMGHPISAPPPPP--HHMVSAVGTPVMLPP 300
           AA+    NKHRAPPNVN  MAAAG+GMYGTQMGHP+SA P PP  HHM SAVGTPVMLPP
Sbjct: 241 AAS----NKHRAPPNVN--MAAAGMGMYGTQMGHPVSAAPMPPTAHHMASAVGTPVMLPP 300

Query: 301 PGHPHHHHHHHHPPHYAVPVAYPVPPPPMHR 330
           PGHPHH  HHH PPHYAVPVAYPVPPPPMHR
Sbjct: 301 PGHPHHLPHHH-PPHYAVPVAYPVPPPPMHR 320

[Close]

BLAST of Spo12483.1 vs. UniProtKB/TrEMBL
Match: B9RE35_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1617720 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 6.600e-90
Identity = 197/330 (59.70%), Postives = 238/330 (72.12%), Query Frame = 1


		  
Query: 6   SWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGAIEAGK 65
           +WSREE+ AFENAIAT+ I+  +E+ W+K+A++V ++ IEE+KQHY LLVEDV AIEAG 
Sbjct: 7   TWSREEDIAFENAIATHWIEDDSEEQWEKIASMVPSRNIEELKQHYRLLVEDVDAIEAGN 66

Query: 66  VPLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDH--SPSFSKEQKGNSNQGNGYSAFGP 125
           VPLP Y  EET               TS++SKD H  S + + +++ N   G+G+   GP
Sbjct: 67  VPLPNYVGEET---------------TSSSSKDSHGFSGAVTTDKRLNCGFGSGFMGLGP 126

Query: 126 SSMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPTQVA 185
           +S G+  K  S+ +QER+KGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFV++RTPTQVA
Sbjct: 127 NSSGHGGKGGSRADQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVLSRTPTQVA 186

Query: 186 SHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNN-NPAA--PAVGTAA 245
           SHAQKYFIRLNSMNRDRRRSSIHDITSVN G +S +Q PITGQQ N NPAA  PA+G+A 
Sbjct: 187 SHAQKYFIRLNSMNRDRRRSSIHDITSVNNGEVSSHQAPITGQQGNTNPAAGAPAMGSAV 246

Query: 246 AAAAAAANKHRAPPNVNVNMAAAGIGMYGTQMGHPISAPPPPPHHMVSAVGTPVMLPPPG 305
                   KHRA  ++        IGMYG  +GHP++APP    HM SAVGTPVMLPPPG
Sbjct: 247 --------KHRAQHHM------PSIGMYGAPVGHPVAAPPG---HMASAVGTPVMLPPPG 297

Query: 306 HPHHHHHHHHPPHYAVPVAYPVPPP-PMHR 330
                 HH HPP Y +PVAYP+PPP  MH+
Sbjct: 307 ------HHPHPP-YVLPVAYPMPPPQTMHQ 297

[Close]

BLAST of Spo12483.1 vs. UniProtKB/TrEMBL
Match: A0A061G1M0_THECC (Duplicated homeodomain-like superfamily protein OS=Theobroma cacao GN=TCM_012262 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 1.200e-88
Identity = 193/334 (57.78%), Postives = 234/334 (70.06%), Query Frame = 1


		  
Query: 1   MPNLASWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGA 60
           M    +WSRE EKAFENAIA +  ++ +E+ W+K+A++V +K++EE+KQHY+LLVEDV A
Sbjct: 1   MAGTGTWSREVEKAFENAIAMHWTEEGSEEQWEKIASMVPSKSLEELKQHYQLLVEDVSA 60

Query: 61  IEAGKVPLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPS-----FSKEQKGNSNQG 120
           IEAG+VPLP Y  EE               +TS+ +KD H  S      + +++ +S  G
Sbjct: 61  IEAGQVPLPSYTGEE---------------ATSSVAKDFHGSSGAAAAAAPDKRSSSGYG 120

Query: 121 NGYSAFGPSSMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVI 180
           NG+S     S G+  K SS+ +QER+KGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVI
Sbjct: 121 NGFSGLSHDSCGHGGKGSSRSDQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVI 180

Query: 181 TRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNNNPAAPA 240
           +RTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVN G  S +Q PITGQQ N  +   
Sbjct: 181 SRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDTS-HQAPITGQQANTNS--- 240

Query: 241 VGTAAAAAAAAANKHRAPPNVNVNMAAAGIGMYGTQMGHPISAPPPPPHHMVSAVGTPVM 300
              AAAAA   + KHRA P++       G+GMYG  +G P++A    P HM SAVGTPVM
Sbjct: 241 --PAAAAAMGPSVKHRAQPHM------PGLGMYGAPVGRPVAA----PGHMASAVGTPVM 296

Query: 301 LPPPGHPHHHHHHHHPPHYAVPVAYPVPPPPMHR 330
           LPP        HHHHPP Y VPVAYP+ PPPMH+
Sbjct: 301 LPP-------GHHHHPPPYIVPVAYPMAPPPMHQ 296

[Close]

BLAST of Spo12483.1 vs. UniProtKB/TrEMBL
Match: V5T6Q5_ARAHY (Putative MYB-related protein 28 OS=Arachis hypogaea GN=MYB28 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 4.000e-87
Identity = 191/328 (58.23%), Postives = 233/328 (71.04%), Query Frame = 1


		  
Query: 7   WSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGAIEAGKV 66
           WS EEEKAFENAIA + I++ +++ W+K+   V +KTIEE+KQHY+LLVEDV AIEAG++
Sbjct: 9   WSYEEEKAFENAIAMHWIEEDSKEQWEKIGEEVPSKTIEELKQHYQLLVEDVTAIEAGQI 68

Query: 67  PLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDH--SPSFSKEQKGNSNQGNGYSAFG-P 126
           P P Y SEET                +++SKD H  S S + +++ N N G+G+S  G  
Sbjct: 69  PFPNYTSEET----------------TSSSKDLHGSSKSSNSDKRSNCNYGSGFSGLGHD 128

Query: 127 SSMGNSTKAS--SKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPTQ 186
           SS  ++ K S     EQER+KGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVI+RTPTQ
Sbjct: 129 SSTSHNGKGSLSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQ 188

Query: 187 VASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNNNPAAPAVGTAAA 246
           VASHAQKYFIRLNSMNRDRRRSSIHDITSVN G ++ NQ PITGQ           +++ 
Sbjct: 189 VASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVANNQAPITGQHGGTTI-----SSST 248

Query: 247 AAAAAANKHRAPPNVNVNMAAAGIGMYGTQMGHPISAPPPPPHHMVSAVGTPVMLPPPGH 306
            A   + KHRA P+ + +   AG+GMYG  +GHP++A   P  HM SAVGTPVMLPP  H
Sbjct: 249 IAMGQSMKHRAQPHHHHHHIPAGLGMYGAPVGHPVAA---PHGHMASAVGTPVMLPPGPH 308

Query: 307 PHHHHHHHHPPHYAVPVAYPVPPPPMHR 330
           PH H H HHPP Y VP+AYP+ PP MH+
Sbjct: 309 PHPHPHPHHPP-YVVPLAYPMAPPTMHQ 311

[Close]

BLAST of Spo12483.1 vs. ExPASy Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.400e-29
Identity = 102/249 (40.96%), Postives = 132/249 (53.01%), Query Frame = 1


		  
Query: 7   WSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGAIEAGKV 66
           W+  E KAFENA+A +                      E     +E + E V     G V
Sbjct: 26  WTAAENKAFENALAVFD---------------------ENTPNRWERVAERVPGKTVGDV 85

Query: 67  PLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSAFGPSSM 126
            + +Y   E +    SS   G +     ++    S  F+ E       G+G+  F  S  
Sbjct: 86  -MRQYKELEDDV---SSIEAGFVPVPGYST----SSPFTLEW----GSGHGFDGFKQSYG 145

Query: 127 GNSTKASS--KLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPTQVAS 186
               K+SS    EQERKKG+PWTEEEH+LFL+GL K+GKGDWR+ISRNFVITRTPTQVAS
Sbjct: 146 TGGRKSSSGRPSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVAS 205

Query: 187 HAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNNNPAAPAVGTAAAAAA 246
           HAQKYFIR  S  +D+RR+SIHDIT+VN   LS NQ P     N  P +    + A    
Sbjct: 206 HAQKYFIRQLSGGKDKRRASIHDITTVN---LSDNQTP--SPDNKKPPSSPDHSMAQQQT 236

Query: 247 AAANKHRAP 254
           ++ + H+ P
Sbjct: 266 SSTSIHKLP 236

[Close]

BLAST of Spo12483.1 vs. ExPASy Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.700e-25
Identity = 77/183 (42.08%), Postives = 103/183 (56.28%), Query Frame = 1


		  
Query: 68  LPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSAFGPSSMG 127
           L +Y     N++NN  +NN     +S  ++D+   S     +  SN G            
Sbjct: 45  LSQYEHPNANNNNNGGDNN----ESSKVAQDEGYASADDAVQHQSNSG------------ 104

Query: 128 NSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPTQVASHAQ 187
                     +ERK+G+PWTEEEH+LFLLGL K GKGDWR ISRNFV TRTPTQVASHAQ
Sbjct: 105 ----------RERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQ 164

Query: 188 KYFIRLNSMNRDRRRSSIHDITSVNGGGL------SPNQVPI-------TGQQNNNPAAP 238
           KYF+R +++NR RRRSS+ DIT+ +   +      +  ++P+       T + N  P AP
Sbjct: 165 KYFLRRSNLNRRRRRSSLFDITTDSVSVMPIEEVENKQEIPVVAPATLPTTKTNAFPVAP 201

[Close]

BLAST of Spo12483.1 vs. ExPASy Swiss-Prot
Match: RADL3_ARATH (Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.900e-13
Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = 1


		  
Query: 1  MPNLASWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGA 60
          M + ASW+R+E K FE A+ATY  DQ   D W  VA  V  K+ EE+++HYELL+ DV  
Sbjct: 6  MSSSASWTRKENKLFERALATY--DQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVND 65

Query: 61 IEAGKVPLPKYASEETNH 79
          IE+G+ P P Y S   NH
Sbjct: 66 IESGRYPHPNYRSNGNNH 81

[Close]

BLAST of Spo12483.1 vs. ExPASy Swiss-Prot
Match: RADL1_ARATH (Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.600e-12
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = 1


		  
Query: 6  SWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGAIEAGK 65
          SW+ ++ KAFE A+ATY  DQ   + W  VA VV  KT EE+K+HYELLV+D+ +IE G 
Sbjct: 13 SWTAKQNKAFEQALATY--DQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGH 72

Query: 66 VPLPKY 72
          VP P Y
Sbjct: 73 VPFPNY 76

[Close]

BLAST of Spo12483.1 vs. ExPASy Swiss-Prot
Match: RAD_ANTMA (Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.000e-11
Identity = 36/71 (50.70%), Postives = 46/71 (64.79%), Query Frame = 1


		  
Query: 7  WSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGAIEAGKV 66
          WS +E KAFE A+A Y  D+   D W  VA  V  +T EE+K+HYE+LVED+  IE+GKV
Sbjct: 11 WSAKENKAFERALAVY--DKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGKV 70

Query: 67 PLPKYASEETN 78
          P P Y +   N
Sbjct: 71 PFPNYRTTGGN 79

[Close]

BLAST of Spo12483.1 vs. TAIR (Arabidopsis)
Match: AT1G49010.1 (Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 280.0 bits (715), Expect = 1.800e-75
Identity = 182/334 (54.49%), Postives = 216/334 (64.67%), Query Frame = 1


		  
Query: 4   LASWSREEEKAFENAIATYSIDQS-NEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGAIE 63
           +A+WSREEEKAFENAIA + +++   ED W+K++++V +K +EE+K+HY++L+EDV AIE
Sbjct: 5   VATWSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIE 64

Query: 64  AGKVPLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSAFG 123
            G+VPLP+Y     +H      +     +TS  ++D HS S S E+K N          G
Sbjct: 65  NGQVPLPRY-----HHRKGLIVDEAAAAATSPANRDSHS-SGSSEKKPNPGTS------G 124

Query: 124 PSSMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPTQV 183
            SS        S+ EQER+KGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVI+RTPTQV
Sbjct: 125 ISSSNGGRSGGSRAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQV 184

Query: 184 ASHAQKYFIRLNSMNRDRRRSSIHDITSVN-------GGGLSPNQVPITGQQNNNPAAPA 243
           ASHAQKYFIRLNSMNRDRRRSSIHDIT+VN       GGG  P  V       + PA P 
Sbjct: 185 ASHAQKYFIRLNSMNRDRRRSSIHDITTVNNQAPAVTGGGQQPQVV------KHRPAQP- 244

Query: 244 VGTAAAAAAAAANKHRAPPNVNVNMAAAGIGMY-GTQMGHPISAPPPPPHHMVSAVGTPV 303
                        +H  P         AG+GMY G  +G PI A   PP HM SAVGTPV
Sbjct: 245 ----QPQPQPQPQQHHPP-------TMAGLGMYGGAPVGQPIIA---PPDHMGSAVGTPV 304

Query: 304 MLPPPGHPHHHHHHHH--PPHYAVPVAYPVPPPP 327
           MLPPP   HHHHHHHH     YAVP AYPVPP P
Sbjct: 305 MLPPPMGTHHHHHHHHLGVAPYAVP-AYPVPPLP 304

[Close]

BLAST of Spo12483.1 vs. TAIR (Arabidopsis)
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 219.5 bits (558), Expect = 3.000e-57
Identity = 157/322 (48.76%), Postives = 189/322 (58.70%), Query Frame = 1


		  
Query: 7   WSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGAIEAGKV 66
           WSRE++ AFE A+A  + D+S E+ W+K+AA V  K++E+IK+HYELLVEDV  IE+G V
Sbjct: 12  WSREDDIAFERALAN-NTDES-EERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCV 71

Query: 67  PLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSAFGPSSM 126
           PLP Y S E +  N  + + G                 S ++ GNS+ G    A      
Sbjct: 72  PLPAYGSPEGS--NGHAGDEGA----------------SSKKGGNSHAGESNQA------ 131

Query: 127 GNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPTQVASHA 186
                  SK +QER+KGI WTE+EHRLFLLGLDK+GKGDWRSISRNFV+TRTPTQVASHA
Sbjct: 132 -----GKSKSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHA 191

Query: 187 QKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQ--------QNNNPAAPAVGT 246
           QKYFIRLNSMN+DRRRSSIHDITSV    +S  Q PITGQ         NNN ++PAV  
Sbjct: 192 QKYFIRLNSMNKDRRRSSIHDITSVGNADVSTPQGPITGQNNSNNNNNNNNNNSSPAVAG 251

Query: 247 AAAAAAAAANKHRAPPNVNVNMAAAGIGMYGT-QMGHPISAPPPPPHHMVSAVGTPVMLP 306
               +A  A          V+ A  G  MYGT  +G P             AVGTPV LP
Sbjct: 252 GGNKSAKQA----------VSQAPPGPPMYGTPAIGQP-------------AVGTPVNLP 279

Query: 307 PPGHPHHHHHHHHPPHYAVPVA 320
            P H  +  H    P   VP A
Sbjct: 312 APPHMAYGVHAAPVPGSVVPGA 279

[Close]

BLAST of Spo12483.1 vs. TAIR (Arabidopsis)
Match: AT2G38090.1 (Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 173.3 bits (438), Expect = 2.400e-43
Identity = 112/257 (43.58%), Postives = 145/257 (56.42%), Query Frame = 1


		  
Query: 7   WSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGAIEAGKV 66
           W+ EE K FENA+A Y  D+   D W +VAA++  KT+ ++ + Y  L EDV  IEAG +
Sbjct: 29  WTAEENKKFENALAFY--DKDTPDRWSRVAAMLPGKTVGDVIKQYRELEEDVSDIEAGLI 88

Query: 67  PLPKYASE----ETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSAFG 126
           P+P YAS+    +   ++ +S NNG  +                         NGY  + 
Sbjct: 89  PIPGYASDSFTLDWGGYDGASGNNGFNM-------------------------NGY--YF 148

Query: 127 PSSMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPTQV 186
            ++ G    A+   E ERKKG+PWTEEEHR FL+GL K+GKGDWR+I+RNFV TRTPTQV
Sbjct: 149 SAAGGKRGSAARTAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQV 208

Query: 187 ASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNNNPAAPAVGTAAAA 246
           ASHAQKYFIR  +  +D+RRSSIHDIT+VN                     P    AAAA
Sbjct: 209 ASHAQKYFIRQVNGGKDKRRSSIHDITTVN--------------------IPDSPDAAAA 236

Query: 247 AAAAANKHRAPPNVNVN 260
             A AN   +PP+V  N
Sbjct: 269 DNATANAPCSPPSVGGN 236

[Close]

BLAST of Spo12483.1 vs. TAIR (Arabidopsis)
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator)

HSP 1 Score: 172.9 bits (437), Expect = 3.200e-43
Identity = 115/273 (42.12%), Postives = 151/273 (55.31%), Query Frame = 1


		  
Query: 5   ASWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGAIEAG 64
           A+W+  E KAFENA+A Y  D +  D W KVAAV+  KT+ ++ + Y  L  DV +IEAG
Sbjct: 32  ATWTAAENKAFENALAVY--DDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVSSIEAG 91

Query: 65  KVPLPKYASEETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSAFGPS 124
            +P+P Y +                           SP F+ +  G     NG+   G  
Sbjct: 92  LIPVPGYIT---------------------------SPPFTLDWAGGGGGCNGFKP-GHQ 151

Query: 125 SMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPTQVAS 184
                ++A    E ERKKG+PWTEEEH+LFL+GL K+GKGDWR+ISRNFVITRTPTQVAS
Sbjct: 152 VCNKRSQAGRSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVAS 211

Query: 185 HAQKYFIRLNSMNRDRRRSSIHDITSVN---GGGLSPNQ--VPITGQQNNNPAAPAVGTA 244
           HAQKYFIR  S  +D+RR+SIHDIT+VN      L  N+  + +  Q++   A P   T 
Sbjct: 212 HAQKYFIRQLSGGKDKRRASIHDITTVNLEEEASLETNKSSIVVGDQRSRLTAFPWNQTD 268

Query: 245 AAAAAAAANKHRAPPNVNVNMAAAGIGMYGTQM 273
                A A       N+ +  A +G+  YG  M
Sbjct: 272 NNGTQADAF------NITIGNAISGVHSYGQVM 268

[Close]

BLAST of Spo12483.1 vs. TAIR (Arabidopsis)
Match: AT5G23650.1 (Homeodomain-like transcriptional regulator)

HSP 1 Score: 161.8 bits (408), Expect = 7.300e-40
Identity = 108/277 (38.99%), Postives = 149/277 (53.79%), Query Frame = 1


		  
Query: 5   ASWSREEEKAFENAIATYSIDQSNEDDWDKVAAVVTTKTIEEIKQHYELLVEDVGAIEAG 64
           +SWS++++ AFE A+A Y+     E  W K+A VV  KT+E++ +HY +L  DV  IE+G
Sbjct: 11  SSWSKDDDIAFEKALAIYN--DKTEIRWKKIATVVPGKTLEQVIEHYNILARDVMLIESG 70

Query: 65  KVPLPKYAS--EETNHHNNSSNNNGTLLSTSTTSKDDHSPSFSKEQKGNSNQGNGYSAFG 124
            V LP Y    EE NH  N+     ++L      K      +  + KG            
Sbjct: 71  CVRLPDYDDFLEEPNH--NAFGKERSILEGGNDRK------YESKHKG------------ 130

Query: 125 PSSMGNSTKASSKLEQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPTQV 184
                      SKL+Q+R++G+PW   EHR FL GL K+GKGDWRSISR+ V+TRT TQV
Sbjct: 131 ----------KSKLKQKRRRGVPWKPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQV 190

Query: 185 ASHAQKYFIRLNSMNRDRRRSSIHDITSVNGGGLSPNQVPITGQQNNNPAAPAVGTAAAA 244
           ASHAQKYF  +NS ++ R+R SIHDIT      +S  Q PIT Q+ NN  A A  T    
Sbjct: 191 ASHAQKYFAHINSEDKKRKRPSIHDITIAENKSISTKQRPITWQKINNNGATASNT---- 248

Query: 245 AAAAANKHRAPPNVNVNMAAAGIGMYGTQMGHPISAP 280
               AN+    P++++ +      ++  Q    IS P
Sbjct: 251 ---QANQTTLQPSLDIPIYGTHNNIWNAQATQVISQP 248

The following BLAST results are available for this feature:

BLAST of Spo12483.1 vs. NCBI nr
BLAST of Spo12483.1 vs. UniProtKB/TrEMBL
BLAST of Spo12483.1 vs. ExPASy Swiss-Prot
BLAST of Spo12483.1 vs. TAIR (Arabidopsis)

BLAST of Spo12483.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902195737\|gb\|KNA12939.1\|	2.2e-179	99.3	hypothetical protein SOVF_1216...	[more]
gi\|731324906\|ref\|XP_010673224.1\|	1.3e-142	82.7	PREDICTED: transcription facto...	[more]
gi\|255541820\|ref\|XP_002511974.1\|	9.5e-90	59.7	PREDICTED: transcription facto...	[more]
gi\|470126530\|ref\|XP_004299236.1\|	9.5e-90	60.1	PREDICTED: transcription facto...	[more]
gi\|590664217\|ref\|XP_007036438.1\|	1.8e-88	57.7	Duplicated homeodomain-like su...	[more]

BLAST of Spo12483.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R1X8_SPIOL	1.5e-179	99.3	Uncharacterized protein OS=Spi...	[more]
A0A0J8CME2_BETVU	8.8e-143	82.7	Uncharacterized protein OS=Bet...	[more]
B9RE35_RICCO	6.6e-90	59.7	DNA binding protein, putative ...	[more]
A0A061G1M0_THECC	1.2e-88	57.7	Duplicated homeodomain-like su...	[more]
V5T6Q5_ARAHY	4.0e-87	58.2	Putative MYB-related protein 2...	[more]

BLAST of Spo12483.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
DIV_ANTMA	1.4e-29	40.9	Transcription factor DIVARICAT...	[more]
MY1R1_SOLTU	1.7e-25	42.0	Transcription factor MYB1R1 OS...	[more]
RADL3_ARATH	1.9e-13	50.0	Protein RADIALIS-like 3 OS=Ara...	[more]
RADL1_ARATH	3.6e-12	54.5	Protein RADIALIS-like 1 OS=Ara...	[more]
RAD_ANTMA	3.0e-11	50.7	Transcription factor RADIALIS ...	[more]

BLAST of Spo12483.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G49010.1	1.8e-75	54.4	Duplicated homeodomain-like su...	[more]
AT5G08520.1	3.0e-57	48.7	Duplicated homeodomain-like su...	[more]
AT2G38090.1	2.4e-43	43.5	Duplicated homeodomain-like su...	[more]
AT5G58900.1	3.2e-43	42.1	Homeodomain-like transcription...	[more]
AT5G23650.1	7.3e-40	38.9	Homeodomain-like transcription...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 6..52 score: 2.5E-6coord: 145..189 score: 1.9
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 142..192 score: 1.3E-10coord: 3..57 score: 1.
IPR006447	Myb domain, plants	TIGRFAMs	TIGR01557	TIGR01557	coord: 141..192 score: 2.1
IPR009057	Homeodomain-like	GENE3D	1.10.10.60		coord: 6..57 score: 3.8E-4coord: 143..188 score: 6.4
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 139..195 score: 2.37E-17coord: 6..61 score: 1.36
IPR017884	SANT domain	PROFILE	PS51293	SANT	coord: 1..59 score:
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 138..194 score: 17
None	No IPR available	PANTHER	PTHR24078	DNAJ HOMOLOG SUBFAMILY C MEMBER	coord: 7..77 score: 2.0E-122coord: 259..329 score: 2.0E-122coord: 110..231 score: 2.0E
None	No IPR available	PANTHER	PTHR24078:SF261	DNAJ (HSP40) HOMOLOG, SUBFAMILY A, MEMBER 3A	coord: 110..231 score: 2.0E-122coord: 7..77 score: 2.0E-122coord: 259..329 score: 2.0E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000785	chromatin
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003682	chromatin binding