Spo12589.1 (mRNA)

Overview
NameSpo12589.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_02449 : 33259 .. 36046 (+)
Sequence length617
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTTTGCATATCCATGGAATTTTGTTTCTTCTTAATTGAAGATTATAGTATTTATAAGCTCTATATATGCAGCAGAATCTGGTTCATCAGCTTCTGGATCAGATCATATAGCCATGATGGAGGATTACATGAAGAAAGTACTAGCGGAAGAGAGGAAAAGACCCTCAAACAATCACGAGATGAAATGCCTCCCCCAGCTTCTGTTCAAGTTCAAGGTTAATTTCTATATTTTTGGAAGGAAAATAGAAATTAGCTTCACTATTACTATGCGTATGTTCTAATTATCTTTGTGTATGTTCTATTTATCTTTGTGTATGTTCTATATAAAACATGCATTGTTTTTCTTGAATATTTTGTTAAAAACCTATTAGCTCAAATGGTAGAGCAATGTGTCATTGCACATGGATATAGGTTCAAATCCTACATAGGTTGTTGAGAACACACAACTTAGCTCCAATGTATTTATAGGGATAGGTCCTATGTAGTGTCACAACTGAACCCACCGAGTCGTGGAGGTGATAACGCGGTAGCCATTACAGTTGGAAATACCGGTAGTTTTAGTAACATGCTAGTTTCGAACTCAACTCAACTTATAGATACTTTTTGGTTGTTTGAGCTTGTAGTTTGTTGCAAGGCCGAAGTGTTTTTTATTTGATCTTGTAGCTTAAGTTTTATATAATTTTAGTTACATTTTAAGCCTTTTTCAGTTTTTGTCCATGTTCTAAAAAGTCAAGTCTTGTGTTCTAAATTTTGTTGCATATGTTCCAAAACTTAAGAGAAATGATAATTCACATTTCAATAATAATAAAAATGCAACTATTGAAATAATTAACCTCTTTTCTTTTAAAAGTTGAAATATAATGCAATTCAAAATTTCCAATTAAGCGTTGCTTATGTTTTAAATCTTTGTGACTTCATGTTCTAAAAACTAAGTCCAATGTTCTAAAAATTTATACATATGTTCTAAAGTAAATAAAACTGATTCAAAAATAAAGAATCATCAAATAGAAGAATTAACATCATAAACGCAATACAAAGAACGAGTTGCCTATGTAGGATTCGAACCTACATCATTGTGCAATTGCACAAAGCTCTACCAATTGAGCTAATAGGCATTACTTGCATGTTTGGTACACCTCAAAAGATAGTGGTTTTTCAACGGTAGGCTAGGCGCAGGGCGTTTCAGCTTCAAGCAATCTATTGGATAATGAGGGTATGGAAGGAAAAGGGGACCTGAGGGAAGGTAAGGCGTACAACATGAAGAGGGGGAGAGAGAAGGGGAGTGCCTTCGCACCAAAAACATGGTCACGTGATATGCTAGACTATTAGACCAGAGGCGAAACTATCTTAAGTTTGGTCTAGGGGTAATTGAATAATGCATCTGCCCATCAACGCTGAAGCAAGGCTGCATCAATAAACTCTCAAAAGATACACGACCAGACTGATGGCATTGAAAAAAACTCATACAACCATGAAGGCAAAAAATACTAAACACTGAAACAAGATTTCCAAAATAAGAACAGGAAAGGGACCTCTGGTACCATAAAAAAGAACAACACTTTATAAGGAGTGTCAAATTTTACAGAATACCTCAACTATCTGATCAACAACGTCAACCAACAAAATTCACCACTTTTGGACCTTGCTTCTTCTTTACCTTCGCGTGATTCTGGTTTTTCTCAGATGCTGGATCACTTTCAGAATTCTTAGAGTCGTCCTCCATCATGAAGTCATCCTCAAGATCGTCCCCACTATATCTTAGTAACATTTGATTGCGACTGCTCTAGTGTAGATACTGAAGAAATATGAAGCAACATCAAAATTTAGAAGTTGTGGTGGGATGATGCAGATGAACATCGCAGAAAAAATGAATTTTTTTTTGAAATCTTAAATTAGCAAAACAAGGTGTAGTTCTCACCATCAATCTATCAGGAGCACAAACACTAGCAAGCACGTCGACGTGTGTGTAGAGAGATTAAGAGAGAAAGCGAGAAAGGGAAGCATTGAGAACAGTTAGGCGAGCCCATGATGACCTGCTACAAAACTGCAATCATATTATTCTGTGTTAGAATTTCATCAGGGGAACTTTATCATAACTAACCAATCTGATTTTTTTCTGTGTTATGGGTTTGACCGTCTGCTTCTTGGGCTTATGCTCTTGATGGTGGACCAGTAGGAAACTCCCTAGCACCACTTGATCATTTGAGGAGAGAGAAATATGAGTCTATTTTTGTATTCAAACACATCAAATTAAATAAATATGACCCTGAAGTATGTTCTAAATTTTAATCCTTATGTTCTAAAGAATAAACTATTATGTTCTAAAAAATAAACTATTATGGTCGAAAAAGTGCTTCTGCTAACGCTACATGTTTGAATTTTACAGGGAAAAACAACAGGATGTCATTAATGCAATGGGATCTCTATAGACAGCAACACTTTTCATCGGAATTACCAATTCTGCCGCAGTTATGCCTGTTGTTTCCACTGAAAGATTTGTTTCCTACAGAGAGAGAGAGCTGCAGGGATGTATTCAGCTTCTACCATTTGCCTTTGCACAAGTTTCTCTTCCTACTTTCTTTGTCTTTTATTTGATACCAAAAAGAGAACCGGAATCATTGATCTATATACGCATTCAAATTGCACGCCTTGCTTTATTTAAAGCTAACTCAATTAAATTAGAACATCACGTTATATAATTTAGAACATCATGTTATATAATTTAGAACATACAAATATCCAGAATTTTATTTCATTTAATTACAGAAACTCTCTAAAAATTT

mRNA sequence

ATGAATGTTTGCATATCCATGGAATTTTGTTTCTTCTTAATTGAAGATTATAGTATTTATAAGCTCTATATATGCAGCAGAATCTGGTTCATCAGCTTCTGGATCAGATCATATAGCCATGATGGAGGATTACATGAAGAAAGTACTAGCGGAAGAGAGGAAAAGACCCTCAAACAATCACGAGATGAAATGCCTCCCCCAGCTTCTGTTCAAGTTCAAGGGAAAAACAACAGGATGTCATTAATGCAATGGGATCTCTATAGACAGCAACACTTTTCATCGGAATTACCAATTCTGCCGCAGTTATGCCTGTTGTTTCCACTGAAAGATTTGTTTCCTACAGAGAGAGAGAGCTGCAGGGATGTATTCAGCTTCTACCATTTGCCTTTGCACAAGTTTCTCTTCCTACTTTCTTTGTCTTTTATTTGATACCAAAAAGAGAACCGGAATCATTGATCTATATACGCATTCAAATTGCACGCCTTGCTTTATTTAAAGCTAACTCAATTAAATTAGAACATCACGTTATATAATTTAGAACATCATGTTATATAATTTAGAACATACAAATATCCAGAATTTTATTTCATTTAATTACAGAAACTCTCTAAAAATTT

Coding sequence (CDS)

ATGAATGTTTGCATATCCATGGAATTTTGTTTCTTCTTAATTGAAGATTATAGTATTTATAAGCTCTATATATGCAGCAGAATCTGGTTCATCAGCTTCTGGATCAGATCATATAGCCATGATGGAGGATTACATGAAGAAAGTACTAGCGGAAGAGAGGAAAAGACCCTCAAACAATCACGAGATGAAATGCCTCCCCCAGCTTCTGTTCAAGTTCAAGGGAAAAACAACAGGATGTCATTAATGCAATGGGATCTCTATAGACAGCAACACTTTTCATCGGAATTACCAATTCTGCCGCAGTTATGCCTGTTGTTTCCACTGAAAGATTTGTTTCCTACAGAGAGAGAGAGCTGCAGGGATGTATTCAGCTTCTACCATTTGCCTTTGCACAAGTTTCTCTTCCTACTTTCTTTGTCTTTTATTTGA

Protein sequence

MNVCISMEFCFFLIEDYSIYKLYICSRIWFISFWIRSYSHDGGLHEESTSGREEKTLKQSRDEMPPPASVQVQGKNNRMSLMQWDLYRQQHFSSELPILPQLCLLFPLKDLFPTERESCRDVFSFYHLPLHKFLFLLSLSFI
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo12589Spo12589gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo12589.1Spo12589.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo12589.1.exon.1Spo12589.1.exon.1exon
Spo12589.1.exon.2Spo12589.1.exon.2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo12589.1.CDS.1Spo12589.1.CDS.1CDS
Spo12589.1.CDS.2Spo12589.1.CDS.2CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo12589.1.utr3p.1Spo12589.1.utr3p.1three_prime_UTR


Homology
The following BLAST results are available for this feature:
BLAST of Spo12589.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo12589.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo12589.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo12589.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
back to top