Spo12632.1 (mRNA) | SpinachBase

Overview


Name	Spo12632.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Protease Do-like 8
Location	SpoScf_01251 : 48761 .. 53102 (-)
Sequence length	860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACAACTAGACAGTAAGGGACGAGAGGAGTAGAAATTGACAATGATGAATGGATGATAATGTCTTTGGTTTTGCTGGTCGATGCCTCTTACAAGTAGACTATCAGAGTATCAATGCTTCATAGCTGCTCCAGATAAATGCAAATGCAGGTGCTACCAATTTCAGCGTGTTGCGTTATTCTTTCTACCACCACTACCAACAACAATGTCTCCAAATCCCTAGGCCGGAGAGAGCTGTTCTTCGATGGCGTTTCATCGGCTTATACCCAACCTTCTTCTTCACCCCAGAGGTTCTTTCACTCTTCCAATTTCTCTCTCGAGATTTTAATTGCTTGCGTTTTTCATGAGTTTGTTTGTTTTCTTGCAGAATTGACAACTGTGGTAATCATAATTTAGTTGATGATGAATTTCGGTCCAATTTTCCGTCCACAACTAAGCGGGCTTTGCTTCGGAGTTTTGGGGCTCTTTCTTGTTATTTTCTTTCAACCTATTTTCCAGGTTTGTAGCAGAATATTTGCGGTACTTTTATTTTTTGATGTGATATAATTATAGGCATGGGTTTGTTTATTGAATTGCAGTCATGGTGCATATTAATCTGTTTCCTGAAATTATGTTGTTTTATATTTTTGTTTGGGTTAGAACTTAGAAACTGATTTAATATATTGGGTAGTATTGACATTGAGAGTTGAATTGTGACTGCATTGTTTCGGAACTGTCATAGATTGGCATCCAGCAAATGCTTTTTCTTTCGAAGTCAATCAATATGTTTGCTTTTAAAGTCAATCATATAGGGAGAGGTTGCGCGTCCTTTTCACTTCAAGAACCTATGTTTGATTATGGAACTCTGATTTTGGGTATAGACATTTTGGGTATATTTATCCCAAATTAGCCGAGTCTCACACCTGAACATGTATCCGTGAGCATGAGTAACTTGCTTCTCATTTTCTTAGTATGATATTTCTAAATATGATATTAAAGAGAGATAGTGCATTCTACCTAATAGTAATAGAGGGAAAGTTAACCCTGAAGTCTTTGTGAATATCTCTAACGCATCCCTTCTTAACCTCTTACCCGCGTTCCCCTATGACTTGAGTAGCCAATTTCAGAGGCTGAAAGTTAATTCTGGCAGCGGAGTTTTGCCAGTTTATGGATTGTTGAAGTCTTATTTAAATGTGTTCGTTATAGAAAAATGAACCACCTGATGAACATAATGATGCAATCCATGATATAGGATTTGTCTAACAAGTGGAAATCACAATCATTGAACTGAGGTCTGAAAGACTGCAACTAAATGGTCTGGACCTTCCAGAATTTTCTCTTGCTACCTGGTGTTTCTGATGATGGTCCTGCTTTTATCAATTTTGTAAATCAGCAGTCTCCAGAGCCTTCAAATTTTGTTGCTTAACTGTTGGGTCAAGGATCCAAATTTCTTCACATAGTGCCTGGTGGTTACAATGGATGGAACACTGCAAATTGCAAAATGTATAGAGTGGTCCAGGATCCGGAATGGCTATTTGAATATTTGCATACAGTGGGACTGAAGATTCAGAACAAAATCATGCAAATGCAAGCTGAACTCCTTTCTGAAGTTACATGAAGCCTGGTCTTATATTGAGGAGAAGGAGAATTTTTTAGAAGCAACGTCCAAGCAGATGAAAAATTGCAGCGAGATAAATCTTGATCACTTGATGTGAGGACCCATTATTTTCATGTCAAAGAGTAGCAAAATATTGAACAGAAGGGCCATTAATACGTTACTGAGAGATGTTAGGGTTAACTCTTCAGCAGCTCATTAAATCTTAAAAGATGTTATTTGATTCCATTGTTAAGGCTATAGGTGAGGGTACGGTATCAAGTAAAATAGTCTTAGATATGTTTGCAGTTACTTATTGTTCTCACCTGAATCCTCCTTATACACAAGTACGCAATGCGCACACACACAGGCACACAGATTTTCATATATCTCTGTAATGCTTGAATATTTCATTTGTTGCAACTTTTGGGAGCTGTCTTCCACAGGAATCTTATTAAAGCTTCTATCTTCCTTGACTGCATATGGTTTTACAGCTTATGCACTAGGTGATCCATCTGTGACAGTTGAAGAAGTAACACCCTCAGTTTTCCCTTCTAGTCCTCTGTTACCTTCTGAGGTTAGCTTTCAGGACATCATTACTACAGTTTGTCTAGTTTGAATATGGTTCTAAGTGGTGACTTCTACACTTGATTTGCTGTATGTTCATGGCAGGTGAATTGATATCTATGTACTTGACAGGAAAGAGTTGTTCAGCTATTTGAGAAGAATACTTATTCTGTGGTGAATATCTTTGATGTAACATTGCGTCCTCAACTGAATGTTACTGGCATGGTTGAGGTAATTACTTTTCACAAAGAATGATATTTCTCATGGCCTTGTGATGATTGATTAGTTCCATCATTACGGAGTCGTTGCTGTTTTTCGAAGATTGAGATGTAGTTTGATCAACTTTCTGCTTTGCCAACTTTGACAATGCTTTGAGTCATGGCTCTCTGACACAGTTGTAACATCGTTATAACAGGTTCCTGAAGGAAATGGTTCAGGAGTAGTCTGGGACGAACAGGGTCACATTGTCACAAACTATCATGGTAAGATTTGGAAATTTGTCAAATGAAATACAGGCATGAAAATCTGAGAAAGTTAAAAATCTTGGCGATGTTATGCATCATATATTTTAAATCTCGCTTTCTCTTTCCTATAAGGGGATGAGGAAATGAAGTATTTTATGTGAATGTGATGAGGACTATTGGGATTAAGGCTTCGTCAACTATATCTTTGTTGTTGTTTTGTGGTAGTGTGTGTAGGAATCGTCTTCTTGTCAAAGCACATAACTTCTTATTACTTGTAAATCAAAAGGAAAAATTCAATCAACATTATACGAGTAAACATAAGCACTTCTTTACATTATACTTGGACATTAGTGCCCCTTTAAGTTATTGCTGTCATGTTCAACAACCCAAAATATAATAACAAAGGAGAAAAGAAACGAAACAAAAAAGATAGGGAAGTTCCTTTACATGGGCTTTCTGCATGTTGTTGATGTTCTTCTGTGTCATCCCTCAACCCCAACTGTATCAAAAAGGAAAAAAATGTCATCAAAGCAATTAGAAAGAAGATAAAAAAAGGAAAAGATAGAAGGAAGAAAAATAACGCTGCTTACTTTTGTGGTGCTGTCCAGTAATTGGTAACTCACTTTCGAGAAATCCTAGCCCTGGAGAAGTTGTTGCACGCGTAAACATCTTAGCTTCTGATGGGTAAAACTACTATTCCTTCTTTTACCATAAATACCTATACATTTTTTGTATTCTGTTTTTCACTTTAAGTGTAATGGCATTGAAATATTTAATCGTCTAACTTTGATTCTTATTGTGGAGGGATTTCTTTCAGGGTTCTAAAGACCTTCGAGGGTAGGCTAATTGGAGCTGATCGAGCAAAGGATCTTGCTGTCTTGAAGGTTTATCTTTTGATACCTACCTTTCTTTTAATCTATTATTTTATCAAACACCATGCGCTACTAATATGACTTTGTACCAACCGTAATTTGTGATTGCACTATATTTCGTTTTCTTGAATGGTAATCTTACATATGTAGAATATGTTGATTTCTTTTGCGTAAAGCTATTAAAAGATGTTCCTTATTCCTTGGAGCTGGGTTAGAAAGCTTGGTTGCTTTTAGATAAAGTCGCTTCAATTAGCACCTGCCAGTAAGACGGTCTTCCTTGTTAGGGAACTAAGAACAATGGCAACGTTGTTATAACGTATGCAAAGAAAGATTAAATAACGTAATAAAGAACTCATAGATTTAACGTGGTTCACTAACAATGTGTTACCACAGGCAGAGGGGAGGAAAGGTTTATTGATCTTGGAATACAGATTACAGAATGCAACTAGGTTATGATCTAGGGAGTTTATATAACACTCTCTAGATACATGCGGAAAAGCCCAGAAAATAGGTCCAAAACAGATAACCCTAGTCCAGAATAACAGATACCAGATCCCGTGCTGGGGCGTTGCAGTAAGGGGCTTGACCAATTCAAGGCATTATTCTAACAAACGTAATTCACTTCATTTAAACATTAATGAAAGTTTAGGAAAATGAAGTCAATGAACATATTGAAATTTTATCTCTAGGTGGCATATCTAATTACAAAATAGAAACATCTTTTATGCTTTGGTGAGTTTTAATATAAAAAAATACCCCTTTTAAATTTTTAACTATTTCAACATATTGCTTTTTTTAATGGGAATATTTTTTGTATAGGTTTTCATTTTCCAAGATTCCAATGCAACTCAATACACACTCATGTGA

mRNA sequence

ATACAACTAGACAGTAAGGGACGAGAGGAGTAGAAATTGACAATGATGAATGGATGATAATGTCTTTGGTTTTGCTGGTCGATGCCTCTTACAAGTAGACTATCAGAGTATCAATGCTTCATAGCTGCTCCAGATAAATGCAAATGCAGGTGCTACCAATTTCAGCGTGTTGCGTTATTCTTTCTACCACCACTACCAACAACAATGTCTCCAAATCCCTAGGCCGGAGAGAGCTGTTCTTCGATGGCGTTTCATCGGCTTATACCCAACCTTCTTCTTCACCCCAGAGAATTGACAACTGTGGTAATCATAATTTAGTTGATGATGAATTTCGGTCCAATTTTCCGTCCACAACTAAGCGGGCTTTGCTTCGGAGTTTTGGGGCTCTTTCTTGTTATTTTCTTTCAACCTATTTTCCAGCTTATGCACTAGGTGATCCATCTGTGACAGTTGAAGAAGTAACACCCTCAGTTTTCCCTTCTAGTCCTCTGTTACCTTCTGAGGAAAGAGTTGTTCAGCTATTTGAGAAGAATACTTATTCTGTGGTGAATATCTTTGATGTAACATTGCGTCCTCAACTGAATGTTACTGGCATGGTTGAGGTTCCTGAAGGAAATGGTTCAGGAGTAGTCTGGGACGAACAGGGTCACATTGTCACAAACTATCATGTAATTGGTAACTCACTTTCGAGAAATCCTAGCCCTGGAGAAGTTGTTGCACGCGTAAACATCTTAGCTTCTGATGGGGTTCTAAAGACCTTCGAGGGTAGGCTAATTGGAGCTGATCGAGCAAAGGATCTTGCTGTCTTGAAGGTTTTCATTTTCCAAGATTCCAATGCAACTCAATACACACTCATGTGA

Coding sequence (CDS)

ATGCAAATGCAGGTGCTACCAATTTCAGCGTGTTGCGTTATTCTTTCTACCACCACTACCAACAACAATGTCTCCAAATCCCTAGGCCGGAGAGAGCTGTTCTTCGATGGCGTTTCATCGGCTTATACCCAACCTTCTTCTTCACCCCAGAGAATTGACAACTGTGGTAATCATAATTTAGTTGATGATGAATTTCGGTCCAATTTTCCGTCCACAACTAAGCGGGCTTTGCTTCGGAGTTTTGGGGCTCTTTCTTGTTATTTTCTTTCAACCTATTTTCCAGCTTATGCACTAGGTGATCCATCTGTGACAGTTGAAGAAGTAACACCCTCAGTTTTCCCTTCTAGTCCTCTGTTACCTTCTGAGGAAAGAGTTGTTCAGCTATTTGAGAAGAATACTTATTCTGTGGTGAATATCTTTGATGTAACATTGCGTCCTCAACTGAATGTTACTGGCATGGTTGAGGTTCCTGAAGGAAATGGTTCAGGAGTAGTCTGGGACGAACAGGGTCACATTGTCACAAACTATCATGTAATTGGTAACTCACTTTCGAGAAATCCTAGCCCTGGAGAAGTTGTTGCACGCGTAAACATCTTAGCTTCTGATGGGGTTCTAAAGACCTTCGAGGGTAGGCTAATTGGAGCTGATCGAGCAAAGGATCTTGCTGTCTTGAAGGTTTTCATTTTCCAAGATTCCAATGCAACTCAATACACACTCATGTGA

Protein sequence

MQMQVLPISACCVILSTTTTNNNVSKSLGRRELFFDGVSSAYTQPSSSPQRIDNCGNHNLVDDEFRSNFPSTTKRALLRSFGALSCYFLSTYFPAYALGDPSVTVEEVTPSVFPSSPLLPSEERVVQLFEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGHIVTNYHVIGNSLSRNPSPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKVFIFQDSNATQYTLM

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo12632	Spo12632	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo12632.1	Spo12632.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12632.1.utr5p.1	Spo12632.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12632.1.CDS.8	Spo12632.1.CDS.8	CDS
Spo12632.1.CDS.7	Spo12632.1.CDS.7	CDS
Spo12632.1.CDS.6	Spo12632.1.CDS.6	CDS
Spo12632.1.CDS.5	Spo12632.1.CDS.5	CDS
Spo12632.1.CDS.4	Spo12632.1.CDS.4	CDS
Spo12632.1.CDS.3	Spo12632.1.CDS.3	CDS
Spo12632.1.CDS.2	Spo12632.1.CDS.2	CDS
Spo12632.1.CDS.1	Spo12632.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12632.1.exon.8	Spo12632.1.exon.8	exon
Spo12632.1.exon.7	Spo12632.1.exon.7	exon
Spo12632.1.exon.6	Spo12632.1.exon.6	exon
Spo12632.1.exon.5	Spo12632.1.exon.5	exon
Spo12632.1.exon.4	Spo12632.1.exon.4	exon
Spo12632.1.exon.3	Spo12632.1.exon.3	exon
Spo12632.1.exon.2	Spo12632.1.exon.2	exon
Spo12632.1.exon.1	Spo12632.1.exon.1	exon

Homology

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BLAST of Spo12632.1 vs. NCBI nr
Match: gi|902238728|gb|KNA25289.1| (hypothetical protein SOVF_007920 [Spinacia oleracea])

HSP 1 Score: 444.5 bits (1142), Expect = 1.200e-121
Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 1

		  
Query: 1   MQMQVLPISACCVILSTTTTNNNVSKSLGRRELFFDGVSSAYTQPSSSPQRIDNCGNHNL 60
           MQMQVLPISACCVILSTTTTNNNVSKSLGRRELFFDGVSSAYTQPSSSPQRIDNCGNHNL
Sbjct: 1   MQMQVLPISACCVILSTTTTNNNVSKSLGRRELFFDGVSSAYTQPSSSPQRIDNCGNHNL 60

Query: 61  VDDEFRSNFPSTTKRALLRSFGALSCYFLSTYFPAYALGDPSVTVEEVTPSVFPSSPLLP 120
           VDDEFRSNFPSTTKRALLRSFGALSCYFLSTYFPAYALGDPSVTVEEVTPSVFPSSPLLP
Sbjct: 61  VDDEFRSNFPSTTKRALLRSFGALSCYFLSTYFPAYALGDPSVTVEEVTPSVFPSSPLLP 120

Query: 121 SEERVVQLFEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGHIVTNYHVIG 180
           SEERVVQLFEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQG IVTNYHVIG
Sbjct: 121 SEERVVQLFEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGLIVTNYHVIG 180

Query: 181 NSLSRNPSPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKV 227
           NSLSRNPSPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKV
Sbjct: 181 NSLSRNPSPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKV 226

[Close]

BLAST of Spo12632.1 vs. NCBI nr
Match: gi|731363075|ref|XP_010693232.1| (PREDICTED: protease Do-like 8, chloroplastic isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 329.7 bits (844), Expect = 4.200e-87
Identity = 167/229 (72.93%), Postives = 194/229 (84.72%), Query Frame = 1

		  
Query: 1   MQMQVLPISACCVIL--STTTTNNNVS-KSLGRRELFFDGVSSAYTQPSSSPQRIDNCGN 60
           MQ+  +P+SACC  +  ++ T+N NVS KSLGRR+LFFDG +S Y+  S S  RID+CG+
Sbjct: 1   MQVLPVPVSACCTTICCASNTSNVNVSNKSLGRRDLFFDGFASIYSHTSPSQSRIDDCGS 60

Query: 61  HNLVDDEFRSNFPSTTKRALLRSFGALSCYFLSTYFPAYALGDPSVTVEEVTPSVFPSSP 120
            NL DD  +SNF  +++R LLR+FG LSCYF+S Y PAYALGDPSVT+EEVTP VFPS P
Sbjct: 61  DNLADDVLQSNFAFSSRRELLRNFGVLSCYFVSNYLPAYALGDPSVTIEEVTPPVFPSGP 120

Query: 121 LLPSEERVVQLFEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGHIVTNYH 180
           LL SEERVV+LFEKNTYSVVNIFDVTLRPQL+ +G+VEVPEGNGSGVVWD QGHIVTNYH
Sbjct: 121 LLSSEERVVRLFEKNTYSVVNIFDVTLRPQLSTSGVVEVPEGNGSGVVWDGQGHIVTNYH 180

Query: 181 VIGNSLSRNPSPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKV 227
           VIGNSLSR  SPG++VARVNILASDGV K+FEG L+GADRAKDLAVLKV
Sbjct: 181 VIGNSLSRKLSPGQLVARVNILASDGVQKSFEGTLVGADRAKDLAVLKV 229

[Close]

BLAST of Spo12632.1 vs. NCBI nr
Match: gi|731363077|ref|XP_010693233.1| (PREDICTED: protease Do-like 8, chloroplastic isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 327.4 bits (838), Expect = 2.100e-86
Identity = 168/229 (73.36%), Postives = 195/229 (85.15%), Query Frame = 1

		  
Query: 1   MQMQVLPISACCVIL--STTTTNNNVS-KSLGRRELFFDGVSSAYTQPSSSPQRIDNCGN 60
           MQ+  +P+SACC  +  ++ T+N NVS KSLGRR+LFFDG +S Y+  S S QRID+CG+
Sbjct: 1   MQVLPVPVSACCTTICCASNTSNVNVSNKSLGRRDLFFDGFASIYSHTSPS-QRIDDCGS 60

Query: 61  HNLVDDEFRSNFPSTTKRALLRSFGALSCYFLSTYFPAYALGDPSVTVEEVTPSVFPSSP 120
            NL DD  +SNF  +++R LLR+FG LSCYF+S Y PAYALGDPSVT+EEVTP VFPS P
Sbjct: 61  DNLADDVLQSNFAFSSRRELLRNFGVLSCYFVSNYLPAYALGDPSVTIEEVTPPVFPSGP 120

Query: 121 LLPSEERVVQLFEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGHIVTNYH 180
           LL SEERVV+LFEKNTYSVVNIFDVTLRPQL+ +G+VEVPEGNGSGVVWD QGHIVTNYH
Sbjct: 121 LLSSEERVVRLFEKNTYSVVNIFDVTLRPQLSTSGVVEVPEGNGSGVVWDGQGHIVTNYH 180

Query: 181 VIGNSLSRNPSPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKV 227
           VIGNSLSR  SPG++VARVNILASDGV K+FEG L+GADRAKDLAVLKV
Sbjct: 181 VIGNSLSRKLSPGQLVARVNILASDGVQKSFEGTLVGADRAKDLAVLKV 228

[Close]

BLAST of Spo12632.1 vs. NCBI nr
Match: gi|698588884|ref|XP_009779589.1| (PREDICTED: protease Do-like 8, chloroplastic [Nicotiana sylvestris])

HSP 1 Score: 274.2 bits (700), Expect = 2.100e-70
Identity = 147/222 (66.22%), Postives = 167/222 (75.23%), Query Frame = 1

		  
Query: 16  STTTTNNNVSKSLGRRELFFDGVSSAYTQPSSSPQRID-----------NCGNHNLVDDE 75
           ST  TNN+V   LGRREL FD +SSA +   S+P  I            +  N   + ++
Sbjct: 22  STIITNNSVF--LGRRELCFDSISSACSADPSTPHPISAPPSTAFTPRGSGDNGTSLVEQ 81

Query: 76  FRSNFPSTTKRALLRSFGALSCYFLSTYFPAYALGDPSVTVEEVTPSVFPSSPLLPSEER 135
            R +FPS T+R LL +F   SCY  S Y  A ALGDPSVTVE+VTPS FPS+ L PSEER
Sbjct: 82  LRKSFPSATRRMLLTNFFMYSCYHPSRYLSALALGDPSVTVEQVTPSTFPSAALFPSEER 141

Query: 136 VVQLFEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGHIVTNYHVIGNSLS 195
           VV+LFEKNTY VVNIFDVTLRP LNVTG VE+PEGNGSGV+WD +GHIVTNYHVIGNSLS
Sbjct: 142 VVELFEKNTYCVVNIFDVTLRPTLNVTGAVEIPEGNGSGVIWDNEGHIVTNYHVIGNSLS 201

Query: 196 RNPSPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKV 227
           RNPS GEVVARVNILA++GV K FEG+LIGADRAKDLAVLKV
Sbjct: 202 RNPSHGEVVARVNILAAEGVQKNFEGKLIGADRAKDLAVLKV 241

[Close]

BLAST of Spo12632.1 vs. NCBI nr
Match: gi|697178869|ref|XP_009598417.1| (PREDICTED: protease Do-like 8, chloroplastic [Nicotiana tomentosiformis])

HSP 1 Score: 271.2 bits (692), Expect = 1.800e-69
Identity = 145/223 (65.02%), Postives = 167/223 (74.89%), Query Frame = 1

		  
Query: 20  TNNNVSKSLGRRELFFDGVSSAYTQPSSSPQRID-----------NCGNHNLVDDEFRSN 79
           TNN+V   LGRREL FD + SA +   S+P  I            +  N + + ++ R +
Sbjct: 26  TNNSVF--LGRRELCFDSICSACSADPSTPHPISAPPSTALTLRGSGDNGSSLVEQLRKS 85

Query: 80  FPSTTKRALLRSFGALSCYFLSTYFPAYALGDPSVTVEEVTPSVFPSSPLLPSEERVVQL 139
           FPS T+R LL SF   SCY  S Y  A ALGDPSVTVE+VTPS FPS+ L PSEERVV+L
Sbjct: 86  FPSATRRMLLTSFFMYSCYHPSRYLSALALGDPSVTVEQVTPSTFPSAALFPSEERVVEL 145

Query: 140 FEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGHIVTNYHVIGNSLSRNPS 199
           FEKNTY VVNIFDVTLRP LNVTG VE+PEGNGSGV+WD +GHIVTNYHVIGNSLSRNPS
Sbjct: 146 FEKNTYCVVNIFDVTLRPTLNVTGAVEIPEGNGSGVIWDNEGHIVTNYHVIGNSLSRNPS 205

Query: 200 PGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKVFIFQD 232
            G+VVARVNILA++GV K FEG+LIGADRAKDLAVLKV   +D
Sbjct: 206 RGQVVARVNILAAEGVQKNFEGKLIGADRAKDLAVLKVETSED 246

[Close]

BLAST of Spo12632.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S271_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_007920 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 8.200e-122
Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 1

		  
Query: 1   MQMQVLPISACCVILSTTTTNNNVSKSLGRRELFFDGVSSAYTQPSSSPQRIDNCGNHNL 60
           MQMQVLPISACCVILSTTTTNNNVSKSLGRRELFFDGVSSAYTQPSSSPQRIDNCGNHNL
Sbjct: 1   MQMQVLPISACCVILSTTTTNNNVSKSLGRRELFFDGVSSAYTQPSSSPQRIDNCGNHNL 60

Query: 61  VDDEFRSNFPSTTKRALLRSFGALSCYFLSTYFPAYALGDPSVTVEEVTPSVFPSSPLLP 120
           VDDEFRSNFPSTTKRALLRSFGALSCYFLSTYFPAYALGDPSVTVEEVTPSVFPSSPLLP
Sbjct: 61  VDDEFRSNFPSTTKRALLRSFGALSCYFLSTYFPAYALGDPSVTVEEVTPSVFPSSPLLP 120

Query: 121 SEERVVQLFEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGHIVTNYHVIG 180
           SEERVVQLFEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQG IVTNYHVIG
Sbjct: 121 SEERVVQLFEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGLIVTNYHVIG 180

Query: 181 NSLSRNPSPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKV 227
           NSLSRNPSPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKV
Sbjct: 181 NSLSRNPSPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKV 226

[Close]

BLAST of Spo12632.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E7Y1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g046640 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.500e-86
Identity = 168/229 (73.36%), Postives = 195/229 (85.15%), Query Frame = 1

		  
Query: 1   MQMQVLPISACCVIL--STTTTNNNVS-KSLGRRELFFDGVSSAYTQPSSSPQRIDNCGN 60
           MQ+  +P+SACC  +  ++ T+N NVS KSLGRR+LFFDG +S Y+  S S QRID+CG+
Sbjct: 1   MQVLPVPVSACCTTICCASNTSNVNVSNKSLGRRDLFFDGFASIYSHTSPS-QRIDDCGS 60

Query: 61  HNLVDDEFRSNFPSTTKRALLRSFGALSCYFLSTYFPAYALGDPSVTVEEVTPSVFPSSP 120
            NL DD  +SNF  +++R LLR+FG LSCYF+S Y PAYALGDPSVT+EEVTP VFPS P
Sbjct: 61  DNLADDVLQSNFAFSSRRELLRNFGVLSCYFVSNYLPAYALGDPSVTIEEVTPPVFPSGP 120

Query: 121 LLPSEERVVQLFEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGHIVTNYH 180
           LL SEERVV+LFEKNTYSVVNIFDVTLRPQL+ +G+VEVPEGNGSGVVWD QGHIVTNYH
Sbjct: 121 LLSSEERVVRLFEKNTYSVVNIFDVTLRPQLSTSGVVEVPEGNGSGVVWDGQGHIVTNYH 180

Query: 181 VIGNSLSRNPSPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKV 227
           VIGNSLSR  SPG++VARVNILASDGV K+FEG L+GADRAKDLAVLKV
Sbjct: 181 VIGNSLSRKLSPGQLVARVNILASDGVQKSFEGTLVGADRAKDLAVLKV 228

[Close]

BLAST of Spo12632.1 vs. UniProtKB/TrEMBL
Match: K4B768_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.000e-68
Identity = 143/216 (66.20%), Postives = 164/216 (75.93%), Query Frame = 1

		  
Query: 23  NVSKSLGRRELFFDGVSSAYT------QPSSSPQRIDNCG-NHNLVDDEFRSNFPSTTKR 82
           N S  LGRREL FD +S+  +       PS+S       G N N + ++ R +FP  T+R
Sbjct: 27  NNSVFLGRRELCFDSISTVCSADPITSNPSTSVSAPRGGGDNGNSLIEQLRRSFPFATRR 86

Query: 83  ALLRSFGALSCYFLSTYFPAYALGDPSVTVEEVTPSVFPSSPLLPSEERVVQLFEKNTYS 142
            LL SF   SCY  S Y  A ALGDPSVTVE+VTP++FPS+ L P EERVV+LFEKNTY 
Sbjct: 87  MLLTSFFMYSCYHPSRYLSALALGDPSVTVEQVTPTIFPSAALFPLEERVVELFEKNTYC 146

Query: 143 VVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGHIVTNYHVIGNSLSRNPSPGEVVAR 202
           VVNIFDVTLRP LNVTGMVE+PEGNGSGV+WD++GHIVTNYHVIGNSLSRNPS G+VVAR
Sbjct: 147 VVNIFDVTLRPTLNVTGMVEIPEGNGSGVIWDKEGHIVTNYHVIGNSLSRNPSRGQVVAR 206

Query: 203 VNILASDGVLKTFEGRLIGADRAKDLAVLKVFIFQD 232
           VNILA+DGV K FEG LIGADRAKDLAVLKV   +D
Sbjct: 207 VNILAADGVQKNFEGILIGADRAKDLAVLKVGASED 242

[Close]

BLAST of Spo12632.1 vs. UniProtKB/TrEMBL
Match: M1A9K8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400006931 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 8.900e-68
Identity = 144/217 (66.36%), Postives = 163/217 (75.12%), Query Frame = 1

		  
Query: 23  NVSKSLGRRELFFDGVSSAYT------QPSSSPQ--RIDNCGNHNLVDDEFRSNFPSTTK 82
           N S  LGRREL FD +SS  +       PS+SP   RI     ++L++  F    P  T+
Sbjct: 25  NNSVFLGRRELCFDSISSVCSADPINSNPSTSPSTPRIGGDNGNSLIEQRF----PFATR 84

Query: 83  RALLRSFGALSCYFLSTYFPAYALGDPSVTVEEVTPSVFPSSPLLPSEERVVQLFEKNTY 142
           R LL SF   S Y  S Y  A ALGDPSVTVE+VTPS FPS+ L PSEERVV+LFEKNTY
Sbjct: 85  RMLLTSFFMYSLYHPSRYLSALALGDPSVTVEQVTPSTFPSAELFPSEERVVELFEKNTY 144

Query: 143 SVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGHIVTNYHVIGNSLSRNPSPGEVVA 202
            VVNIFDVTLRP LNVTGMVE+PEGNGSG++WD++GHIVTNYHVIGNSLSRNPS G+VVA
Sbjct: 145 CVVNIFDVTLRPTLNVTGMVEIPEGNGSGIIWDKEGHIVTNYHVIGNSLSRNPSRGQVVA 204

Query: 203 RVNILASDGVLKTFEGRLIGADRAKDLAVLKVFIFQD 232
           RVNILA+DGV K FEG LIGADRAKDLAVLKV   +D
Sbjct: 205 RVNILAADGVQKNFEGILIGADRAKDLAVLKVEASED 237

[Close]

BLAST of Spo12632.1 vs. UniProtKB/TrEMBL
Match: M1A9K6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400006931 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 8.900e-68
Identity = 144/217 (66.36%), Postives = 163/217 (75.12%), Query Frame = 1

		  
Query: 23  NVSKSLGRRELFFDGVSSAYT------QPSSSPQ--RIDNCGNHNLVDDEFRSNFPSTTK 82
           N S  LGRREL FD +SS  +       PS+SP   RI     ++L++  F    P  T+
Sbjct: 25  NNSVFLGRRELCFDSISSVCSADPINSNPSTSPSTPRIGGDNGNSLIEQRF----PFATR 84

Query: 83  RALLRSFGALSCYFLSTYFPAYALGDPSVTVEEVTPSVFPSSPLLPSEERVVQLFEKNTY 142
           R LL SF   S Y  S Y  A ALGDPSVTVE+VTPS FPS+ L PSEERVV+LFEKNTY
Sbjct: 85  RMLLTSFFMYSLYHPSRYLSALALGDPSVTVEQVTPSTFPSAELFPSEERVVELFEKNTY 144

Query: 143 SVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGHIVTNYHVIGNSLSRNPSPGEVVA 202
            VVNIFDVTLRP LNVTGMVE+PEGNGSG++WD++GHIVTNYHVIGNSLSRNPS G+VVA
Sbjct: 145 CVVNIFDVTLRPTLNVTGMVEIPEGNGSGIIWDKEGHIVTNYHVIGNSLSRNPSRGQVVA 204

Query: 203 RVNILASDGVLKTFEGRLIGADRAKDLAVLKVFIFQD 232
           RVNILA+DGV K FEG LIGADRAKDLAVLKV   +D
Sbjct: 205 RVNILAADGVQKNFEGILIGADRAKDLAVLKVEASED 237

[Close]

BLAST of Spo12632.1 vs. ExPASy Swiss-Prot
Match: DEGP8_ARATH (Protease Do-like 8, chloroplastic OS=Arabidopsis thaliana GN=DEGP8 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 9.400e-63
Identity = 131/219 (59.82%), Postives = 161/219 (73.52%), Query Frame = 1

		  
Query: 14  ILSTTTTNNNVSKSLGRRELFFDGVSS-----AYTQPSSSPQRIDNCGNHNLVDDEFRSN 73
           ++++  +  N ++ +GRR+L     S        + P  S  ++      NL +   +S 
Sbjct: 3   VIASFCSKPNENEFVGRRQLLSSVCSKISQGDVVSHPPVSSVKVTQDWKSNLHELAVKS- 62

Query: 74  FPSTTKRALLRSFGALSCYFLSTYFPAYALGDPSV-TVEEVTPSVFPSSPLLPSEERVVQ 133
            PSTT+R LL S     C+  S Y  A ALGDPSV TVE+V+P+VFP+ PL P+E R+VQ
Sbjct: 63  VPSTTRRILLTSLFMNLCFNPSRYLSALALGDPSVATVEDVSPTVFPAGPLFPTEGRIVQ 122

Query: 134 LFEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGHIVTNYHVIGNSLSRNP 193
           LFEKNTYSVVNIFDVTLRPQL +TG+VE+PEGNGSGVVWD QG+IVTNYHVIGN+LSRNP
Sbjct: 123 LFEKNTYSVVNIFDVTLRPQLKMTGVVEIPEGNGSGVVWDGQGYIVTNYHVIGNALSRNP 182

Query: 194 SPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKV 227
           SPG+VV RVNILASDGV K FEG+L+GADRAKDLAVLKV
Sbjct: 183 SPGDVVGRVNILASDGVQKNFEGKLVGADRAKDLAVLKV 220

[Close]

BLAST of Spo12632.1 vs. ExPASy Swiss-Prot
Match: DEGP1_ARATH (Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana GN=DEGP1 PE=1 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 2.100e-14
Identity = 67/225 (29.78%), Postives = 117/225 (52.00%), Query Frame = 1

		  
Query: 9   SACCVILSTTTTNNNVSKSLGRRELFFDGVSSAYTQPSS----SPQRIDNCGNHNLVDDE 68
           ++C ++LS+T   ++   S     L F  +SS+ + P S      +R     +   ++D 
Sbjct: 5   TSCSLLLSSTLFLHSPPSS----HLSFFNLSSSRSSPISLYPIRSKRYFRILSKLSLNDN 64

Query: 69  FRSNFPSTTKRALLRSFGALSCYFL--STYFPAYALGDPSVTVEEVTPSVFPSSPLLPSE 128
            R +   T        F A+  +FL  ++   +++L   S  VE  +  V  +   L ++
Sbjct: 65  NRDDDDDTLH---FTPFSAVKPFFLLCTSVALSFSLFAASPAVESASAFVVSTPKKLQTD 124

Query: 129 E-RVVQLFEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGHIVTNYHVIGN 188
           E   V+LF++NT SVV I ++ +R       ++EVP+G+GSG VWD+QGHIVTNYHVI  
Sbjct: 125 ELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRG 184

Query: 189 SLSRNPSPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKV 227
           +           + + +  +D    TF+ +++G D+ KD+AVL++
Sbjct: 185 A-----------SDLRVTLADQT--TFDAKVVGFDQDKDVAVLRI 209

[Close]

BLAST of Spo12632.1 vs. ExPASy Swiss-Prot
Match: DEGP5_ARATH (Protease Do-like 5, chloroplastic OS=Arabidopsis thaliana GN=DEGP5 PE=1 SV=3)

HSP 1 Score: 67.0 bits (162), Expect = 3.200e-10
Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 1

		  
Query: 122 EERVVQLFEKNTYSVVNIFDVTLRPQLNVTGMVEVP----EGNGSGVVWDEQGHIVTNYH 181
           EER V LF+K + SVV I  + L    +   + +      EG GSG VWD+ GHIVTNYH
Sbjct: 88  EERNVNLFQKTSPSVVYIEAIELPKTSSGDILTDEENGKIEGTGSGFVWDKLGHIVTNYH 147

Query: 182 VIGNSLSRNPSPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKV 227
           VI    +     G    +V+++ + G   + EG+++G D   DLAVLK+
Sbjct: 148 VIAKLAT--DQFGLQRCKVSLVDAKGTRFSKEGKIVGLDPDNDLAVLKI 194

[Close]

BLAST of Spo12632.1 vs. TAIR (Arabidopsis)
Match: AT5G39830.1 (Trypsin family protein with PDZ domain)

HSP 1 Score: 241.5 bits (615), Expect = 5.300e-64
Identity = 131/219 (59.82%), Postives = 161/219 (73.52%), Query Frame = 1

		  
Query: 14  ILSTTTTNNNVSKSLGRRELFFDGVSS-----AYTQPSSSPQRIDNCGNHNLVDDEFRSN 73
           ++++  +  N ++ +GRR+L     S        + P  S  ++      NL +   +S 
Sbjct: 3   VIASFCSKPNENEFVGRRQLLSSVCSKISQGDVVSHPPVSSVKVTQDWKSNLHELAVKS- 62

Query: 74  FPSTTKRALLRSFGALSCYFLSTYFPAYALGDPSV-TVEEVTPSVFPSSPLLPSEERVVQ 133
            PSTT+R LL S     C+  S Y  A ALGDPSV TVE+V+P+VFP+ PL P+E R+VQ
Sbjct: 63  VPSTTRRILLTSLFMNLCFNPSRYLSALALGDPSVATVEDVSPTVFPAGPLFPTEGRIVQ 122

Query: 134 LFEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGHIVTNYHVIGNSLSRNP 193
           LFEKNTYSVVNIFDVTLRPQL +TG+VE+PEGNGSGVVWD QG+IVTNYHVIGN+LSRNP
Sbjct: 123 LFEKNTYSVVNIFDVTLRPQLKMTGVVEIPEGNGSGVVWDGQGYIVTNYHVIGNALSRNP 182

Query: 194 SPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKV 227
           SPG+VV RVNILASDGV K FEG+L+GADRAKDLAVLKV
Sbjct: 183 SPGDVVGRVNILASDGVQKNFEGKLVGADRAKDLAVLKV 220

[Close]

BLAST of Spo12632.1 vs. TAIR (Arabidopsis)
Match: AT3G27925.1 (DegP protease 1)

HSP 1 Score: 80.9 bits (198), Expect = 1.200e-15
Identity = 67/225 (29.78%), Postives = 117/225 (52.00%), Query Frame = 1

		  
Query: 9   SACCVILSTTTTNNNVSKSLGRRELFFDGVSSAYTQPSS----SPQRIDNCGNHNLVDDE 68
           ++C ++LS+T   ++   S     L F  +SS+ + P S      +R     +   ++D 
Sbjct: 5   TSCSLLLSSTLFLHSPPSS----HLSFFNLSSSRSSPISLYPIRSKRYFRILSKLSLNDN 64

Query: 69  FRSNFPSTTKRALLRSFGALSCYFL--STYFPAYALGDPSVTVEEVTPSVFPSSPLLPSE 128
            R +   T        F A+  +FL  ++   +++L   S  VE  +  V  +   L ++
Sbjct: 65  NRDDDDDTLH---FTPFSAVKPFFLLCTSVALSFSLFAASPAVESASAFVVSTPKKLQTD 124

Query: 129 E-RVVQLFEKNTYSVVNIFDVTLRPQLNVTGMVEVPEGNGSGVVWDEQGHIVTNYHVIGN 188
           E   V+LF++NT SVV I ++ +R       ++EVP+G+GSG VWD+QGHIVTNYHVI  
Sbjct: 125 ELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRG 184

Query: 189 SLSRNPSPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKV 227
           +           + + +  +D    TF+ +++G D+ KD+AVL++
Sbjct: 185 A-----------SDLRVTLADQT--TFDAKVVGFDQDKDVAVLRI 209

[Close]

BLAST of Spo12632.1 vs. TAIR (Arabidopsis)
Match: AT4G18370.1 (DEGP protease 5)

HSP 1 Score: 67.0 bits (162), Expect = 1.800e-11
Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 1

		  
Query: 122 EERVVQLFEKNTYSVVNIFDVTLRPQLNVTGMVEVP----EGNGSGVVWDEQGHIVTNYH 181
           EER V LF+K + SVV I  + L    +   + +      EG GSG VWD+ GHIVTNYH
Sbjct: 88  EERNVNLFQKTSPSVVYIEAIELPKTSSGDILTDEENGKIEGTGSGFVWDKLGHIVTNYH 147

Query: 182 VIGNSLSRNPSPGEVVARVNILASDGVLKTFEGRLIGADRAKDLAVLKV 227
           VI    +     G    +V+++ + G   + EG+++G D   DLAVLK+
Sbjct: 148 VIAKLAT--DQFGLQRCKVSLVDAKGTRFSKEGKIVGLDPDNDLAVLKI 194

The following BLAST results are available for this feature:

BLAST of Spo12632.1 vs. NCBI nr
BLAST of Spo12632.1 vs. UniProtKB/TrEMBL
BLAST of Spo12632.1 vs. ExPASy Swiss-Prot
BLAST of Spo12632.1 vs. TAIR (Arabidopsis)

BLAST of Spo12632.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902238728\|gb\|KNA25289.1\|	1.2e-121	99.5	hypothetical protein SOVF_0079...	[more]
gi\|731363075\|ref\|XP_010693232.1\|	4.2e-87	72.9	PREDICTED: protease Do-like 8,...	[more]
gi\|731363077\|ref\|XP_010693233.1\|	2.1e-86	73.3	PREDICTED: protease Do-like 8,...	[more]
gi\|698588884\|ref\|XP_009779589.1\|	2.1e-70	66.2	PREDICTED: protease Do-like 8,...	[more]
gi\|697178869\|ref\|XP_009598417.1\|	1.8e-69	65.0	PREDICTED: protease Do-like 8,...	[more]

BLAST of Spo12632.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9S271_SPIOL	8.2e-122	99.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8E7Y1_BETVU	1.5e-86	73.3	Uncharacterized protein OS=Bet...	[more]
K4B768_SOLLC	3.0e-68	66.2	Uncharacterized protein OS=Sol...	[more]
M1A9K8_SOLTU	8.9e-68	66.3	Uncharacterized protein OS=Sol...	[more]
M1A9K6_SOLTU	8.9e-68	66.3	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo12632.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3

Position :

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Match Name	E-value	Identity	Description
DEGP8_ARATH	9.4e-63	59.8	Protease Do-like 8, chloroplas...	[more]
DEGP1_ARATH	2.1e-14	29.7	Protease Do-like 1, chloroplas...	[more]
DEGP5_ARATH	3.2e-10	39.4	Protease Do-like 5, chloroplas...	[more]

BLAST of Spo12632.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

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Match Name	E-value	Identity	Description
AT5G39830.1	5.3e-64	59.8	Trypsin family protein with PD...	[more]
AT3G27925.1	1.2e-15	29.7	DegP protease 1	[more]
AT4G18370.1	1.8e-11	39.4	DEGP protease 5	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009003	Peptidase S1, PA clan	unknown	SSF50494	Trypsin-like serine proteases	coord: 126..226 score: 4.46
None	No IPR available	GENE3D	2.40.10.10		coord: 118..226 score: 6.6
None	No IPR available	PANTHER	PTHR22939	SERINE PROTEASE FAMILY S1C HTRA-RELATED	coord: 16..226 score: 2.3
None	No IPR available	PANTHER	PTHR22939:SF99	PROTEASE DO-LIKE 8, CHLOROPLASTIC	coord: 16..226 score: 2.3
None	No IPR available	PFAM	PF13365	Trypsin_2	coord: 161..232 score: 4.

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0044249	cellular biosynthetic process
biological_process	GO:0044262	cellular carbohydrate metabolic process
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0009987	cellular process
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:0019538	protein metabolic process
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0031977	thylakoid lumen
molecular_function	GO:0008236	serine-type peptidase activity