Spo12875.1 (mRNA) | SpinachBase

Overview


Name	Spo12875.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Plastid transcriptionally active
Location	chr3 : 2160873 .. 2168637 (+)
Sequence length	1164

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGTTGTGTCAGGTTTGAGTTGGGTATGTGTCGTAGTTTGAGAATTTGACTCGTGTTTGTGAGTGTTGTGTCAGGTTTGAATTGGGTATGTGTCGTAGTTTTAGAATTTGACCCGTGTTTGTGAGTGTTGTGTTAGGTTTGAGTTGGGTTTGTGTCGTAGTTTGAGAATTTGACCCGTGTTTGTGAGTGTTGTGTCAGGTTTGAGTTGGGTATGTGTCGCAGTTTGAATTACGAGGGTACTTGAATAGTAGGCAGGTGAGACCGTCAAAGTCAAATCAATGAGTTAAAGAGGAACATTTTTTCAGTTCAATTAGGGCTACGAGGTGCGTTCGTGTTTTATTTTGTGTCGATTTTGATATGTGTTTATGTGTTGTGTAGGGCTCGATTTGGGGTTTGCGACTTTGTACTATGTATTATATTGACCAGATATGTTAGCCATGAACACATGTATCATGTATGTGTTCCCTCCCTTGAACTACGTTGTTAGAGGCATATATCTTATTCTCAATTAGGGAAAACGAGGTGTTTTGGTTTTAAATTTGTGTCGAATTTGGTATGCGTTTGTAAGTGTTGAGTCAGGTTCGTGTTGGGTTTGTGTCTTGTTGTCGTGGTTGGTCAGCTCTAAATATATCTCCTCCCTCGGAATACGTCGTTAGACGGGTGTATTCTATTTAGCTACTCTCTATTCGCATTGACGAGGTATCAGTGGAATATTTTGGAGATTGTTTTGGGATTTAGGGTGATACTGTGGGGATAGTGTCCAAAACGTACATAAGAAAGTGTAAAATTACCTATCGGTAAATATTAGATATTACTAATATTATATAGGCTTTTTAAATTTTATTGAGTAATATGTGAAAAACGACAACAATACATGTAGCATACGTGTCTATTATATTGGAGCGATGTGTCATGTTTTTCCAACAAAAATGTTATTATTGTTGGCACACGACGTCCATACACATAGTTGATAGTTGCATGTCGTATACTCATATAGTCATATCTATCATTTTCCCATATCATACTAGCGTATCCCGAGTGGGTTTCGTTGTTGTGCCTTATCTCAAGCCTAGGGGTGACAGGCGAGCCGAGACCGATCTTGGGTTGGTCAAGCTTTGCTCGTTACACTTTCATTTAAACTAGAACCGAGCCTCAACCTTTGTCGATCTTAAAATTTCAAGTTCAACTTACCATAAAAGTTGTTCAACTAAAGCTTGTTCACAGGTTTCACTAGTCGAGCTTTGTTATGCTCAGGTTCGTGTTGAGCTTAAATTATTCCCAAATCAAGTACGCTCATTAACACCACTACTCGGCCCAACCCGACCCCACCCGAACCAACCCAGCCCACCCAAGCCGACCCAGCCCGCCCCGGCCCAGGCTAGTGTCATTCTTTAACCATTGGGAAAATTCAAACTTACCAATGACTTCAAGCATGTGTCATCTTTTGCTCTCATGAAACACTCATCTTTTCCAGACTTCCAGTAAAGATAAAATGAACCAAGGAATTCTGCAATGGAATCCCTCTTCTCCAAACCCCCTCTCACCCTTTTCTCTCTCCTCATCCCTACCCTCAACAATCCCATTTTCCCTCAAATTCAGACGCATAACCCTAATCTCAGCAACCATAAAATCCCTCGAAGAAGAAGAGAACTTACCCGCAAAAGAGAGAAGAAAGCTTCGGAATGAGAGGAGAGAGAGTAAATCCTTCAATTGGAAAGAGGAAGTGGAGATGAAGCTCATTAAGAAGACTAAGAAGAGATATGGGTCGTGGATGGACGAGCTCAACCTTGATACTTTGGCCCAATTGGGCCCTCAATGGTGGGTTGCTCGGGTTTCTCGGGTTAATGGTCATGAGACTGCTGAAAAGCTTGCTCGTTCTCTAGCTAACAACTTCCATGAAAATGATTTTAAGGTAATTGTGGGGAGAAATTGAAAGAAATTTTGAGAATTTTCTGCTTTTTTGGCTTTTTGGGTTTGTTGAATTTGATATTTCAAATGCTATTTTTGTTTTTTGTTTTTGTGATGAATTTGTTTGTTAGAGTTCTGATATTTGGGAATCTTTAAATGAATATTTCATTGGAAATTCATATTAACAAGGTTATGCAAAAAAACTAAGACAATTTTCTGCCTTTTTTTTTGCTTCTGGGTTTGTTGAATTTGATATTGCAAATGCTCCTTTTTGTTTGTTTTTGTGATGAATTTGTTTGTTAGAATGCTTATATTTGGGAATTTTTAATTGAAAATTTCATTGGACATTCATATTATGCAATTATATGTGAAAGAAATGTGGGGTTTTCTCTGGTAAGAAACATCTAATGAGGTGGTTAATGATGGATTATGGCAGCTTGATTAAGTGATTATACTGGTTCGAATTCGAGATTTTGGGTTTTGTTAGGTCGTTTAAGTGATCAAAGTTGTTCAAATTCGAGATTATGAAATTTGCTAGGTAGATTAGGTGCAATAACAAAATGTGACATGGTTCGAATTCGAGAATATGAATTTTGGCAGGTCGATTAAGTGATCAAAGTGGTTCGAATTCGAGATTATGAAATTTGCTAGGTGGATTAGGTGACAATAGCAATTTGTGACATGAGTAGACACTATGTTTGGTTGTGAATTGCCTGTGCTTGTGCAATTTCATTCATGAAGTGTAGGAATCATGTTGCATCATTGCCGAGTCTTTAGTTACTTCTTCTGTTCGAAAATAATAGTCATGTACTCTTTTCTGGATTGTTCGGAAAAAATGTCACGTTGTCTAAGGCTTTGTTTGGTACGACATATAGTAAAGGAAGGGAAGAGAAAGGTAAAGAAGGGAAGAAAAGAAGAGAAAAAAAACTTAATATATTTTCCGTTGTTTGGTTTGATGGAAAGGAGAGAGGGGAAAAGAAAGGAAAATCATTTGACAACTTTTAATTTCCTTTTTCCTTCTGAATTCCCCCACTTTTGGGAGGAAAGGAAAGGTAAGATAATTAATGATGTTTTCCTTCCATTTCTCTTTCTTTCCTTTCCTTTCAAATCCAATTTAAGTTTTGAAACCAAACACGGGAACCCATTTTTTTTTTCTTTCTCTTCTTTTCCTTCTGATTCCTTTCTACCAAAGAAAGCCTAAATTAGAAATAAATTATGGTTGGCACGCCTACCGTTAATATGGAGTTATGGAGAGAGAGAGAGAGAGAGGGGGGATGCGGAGAGTATGTCTTTTGTGTCTTAAGTATTGTGGAGTTCTTCAGGTTGTAAATGAACATCATGCTTCTGTAAATGAGAACTGAACTTGGATACTTTATGTCCATGGTGACATGGTGTTATGACAAAGTACAATGACGGGCGATATGTATGGAGTATATGTATATCTATGAATTCTATACCTTAAAAATTCTTACTATTATTTCAGCTTTATATGCCTGCAGTACAAGAGAAAAGGAAATTAAAGAGTGGTTCGTTATCAATCAAGTCAAAACCGCTATTTCCTGGATGCGTCTTTTTGAAGTGTGTGATGAACAAGGAGGTACATGACTTCATTAGAGAATTTGAAGGCATAGGAGGATTTGTTGGATCCAAAGTTGGAAACACGTAAGCTAATTTCAACGCTTTTCCTTCTTGACACACTGTAAACTGTTTGCAATGTGTAAATCTTACATTTATGTAACGTTGCTGCTCTCTTTCTTCTGTTGTTGATTTTGGTGTTTGTTTCCTTCTCAAAACTTGAATGAATGAACAGCAAACCACGCATCTGAAAGTACTTTTAAGTTTCATGTCCAAAGATCAACCTGTTTTTTTTCTTCTGAATTCTTATGGTTATGTTGTGGAGACTATGGGAGAGGGTAGAAATGGATTGATAGGGTTTAGACTTTAGATGGGAAAGTAACTTTAGATGGGAGAGTAACTGTGTTGCATTATTTCCAGGATATATGGCCAGTTATCAACCATCTAAACTGTATGTCATCATGATTTTGTGCTGACAACCTAGGAAAAAAAGCTAAACAAGAGCTTTCGTTGACCTTGTACTCGAATTTGTATCTCTGAAGAATGATAAAATTTACACAACCTGAATAACTTACTAAAAAAGAAAATGTATGCTGTAGATGGCATAATTAGTTAATTACTCGCATGTTATTGGGTTGTAGCATTTCAATCCTCTAGAAGTTTTTTTGATGCAAAGCAAGGACTACAGTAAATTAACAAAGTTCAAGAGTTACAACAAAGAGTCCAGGGAGGCTTTTCTTCCTCTACCACAATTTCCAGAGCCTCGGAAGGGCTAAATAACAAGGATAAAGGGTTCACAAACACCGTATTACAATAGTTGTCTTCTTCCCTACACATTTTCGCCAAAGCATCTGCCACTCGGTTAGTACTCCTTGGGCTCAACTGATTTTTGACATTGTTAGTCCGCGGTACGAGGTCCCTGCATAGTATTATAAGATTCATATTAGCATCAGGGACTTGGTCTTCAGCATTAACCATTTGCACAGCTATTTGGGAGTCTGCATGCAGTACATAAATGTTAAACCGTTCACTGAACCAAATTGATTTAGCTCCATTTACGGAGAAACTTTACCATGGCAAGAGCTGCTATCGATGATTCGATGCAGGGCACACAACAATCAGGATTACAACTTAGTTCTTTTATCCTTTCCTAGTCTGAAATAAGCTTCAAATTTTCTATTCTGCATTTTGCGATTTGTGCCTGAGACAAACCTTGAAGGCTTCGGCTTTGCCATTCTGGAATCTGGCCTGGGGAGCAATGGGACACTTCTTAACTATGCTAGCTTTGACTTTTTTGTTTTGTTTTGTTTTGTTTTGAGGGGAGTGATGTTAGCTTTGTCTTCGTTATATCCTGTCCATTTCCTTTTTTCCAGACTTGTAATGTTCCTCAGTAAGAAAGTTGCACTTTGTAGGTTCTATTTGGCATCATTACCCGCTTTTCCAAAAACCATTATTTCTTAGTATTAACCTTGATGGCCTGTTTGGTCGATGTTAATTAGTGACAATAGTGGTATTGAGTTTGTGTGTAATTTTGCAAGGAAAGCCACATGCTAATTACAATTTCATTTCCCTGCATGTGTTTCCTTTCACAGATTTCCATTCCCATCCACTACACATGAAATGGCTATGTGTGGTAATGACAATTCAAGAATAAAAATACGTATTTGAAATTAGAGTTGCATTGCCATGAACAATGACTAAACATTTTTCTTACACAATTACACACAAATCTTGTACCATTAGCACCGTTCATTGTTGTTTCCTACAAACAAGACCACTAGTGTCTACTCCGTAGTTATTACTTATTAGGACTAACAATTTTCATTTGGGCTAATGCATGAACTGGAATTATTTGATACATTTATGTTTATACCAAGAAATTTAGTCGTATTTTCTTGCTGAATAAGAGAGAAACCTCCTTTTTTCTTCTTCTTTCATGGTTAGGTAAGTCCCGACATCAGTGGAGTTAAATTAAATCTGTTATACCGTGTTTACAGGAAACGACAGATAAACAAACCCAGACCGGTATCTGAAGAAGACATGGAAATAATGTTTAAACAAGCAAAAGAAGAGCAGGAGAAAGCTGATCAAGCCTTCGAAGATGCTCAGAAATCAGTGATTAGCGCAGAGATGCCTCTTCTCGAGTCTGAGTCTGGTTCTCTGGAAACACTTATTGATGCAAATAAAAAAGGAACAACCAAGAAGATTTCAAAGTCTGCACCAAAAGAAAGAAAGAAAAAGATTCCGAAAATTGGTTCAACTGTTCGAGTTGTTTCTGGATCCTTTGCAGAGTTTTCAGGCATCCTCAAGAAGGTGGATAAAAAGAACGATAAGGTATGTATTTTCACTGCAGTAAATACTTCGAATGCACAAAGCTTTTAGTCATGTTATCTTCAACTTAAAAAGATTTTCAGTAAAAAAATTCAGTGTTATTCCACATAGACCTGATCAAATTGCGGGCCGGGGCAAATTTCTGCTCCAAACCCGCTATTTCGGGCCATTCGGGCCGGACCAAATTTATAACTTAAAAATTAGGCCTGATCAACATGATCCCGCCCCCGCCCTAAATTTTGGGGGTTAGGGCATAATTTTTAGGCCCGGTTTCTGGCCCCAGCCCGAAATTTTAATTTTTTTGCTGGCTTTGGGCAACGTAAAACTACACTTTTAGTTCTAAATTTGGCCTCGACCGAAGCCCGGTATTTTAGGCCCAAATTAGCGGGTTTGGGCACAAAAAAGTGGCTAAATCTTGACCCAGCCCGACTTGATGGACTAAATTTATATCTCGACCCTCCCTGGCCCGCCTTTTGATCAAGTCTACTAAAATTACAATTTCGAGTACCCCAAAAACCGGGCTGCTATTTTCGGGCTGAGCTATGTCGGGCCAGCGGGCCGGGCTTACGACGATCAGGTCTAATTCTACAAAAGGAAAGTCTAATCAGTTTTATGCATGTCTTTCTGTAGGTGACTGTCGGATTCACGTTATTTGGCAAGGAAACCATTGCCGACTTAGACATCAAAGAAATCGCAGAGGAGGCAGTGATTGCAGTGTAATCTAATGTAGGAATCTGGTTTGTAAACCTAGTGTATGTAATTGTTTGTTGTGTTTTAGATGAGTGAATGTATATTACAGAGTGAATATGTGTACTATTTTTAGAAGTACAGTTATGTTCTATCCTCCTTCATTCTACTGAGATCATTGCACATTTGCACACTCACATAAAATCTGCAGAATTTGGTGGTGTTGTTTTCCTTGCAGAACTTCTGAAAGACTAGGAAGAAATATTTGCTCAAAGGGAAAATACTGTCTGAATATCAACTGCAATTCTGTTAAAATAAAAATCACTATGAATCTAGCTATATATAGTCCAGCTTTTTCCAAAAAGTTTCATGCTGATTTGCTTTTTTTATTAGAATATTCTCCTGATTAGAACTGAAATTTAATTATAGCTAAGTTGGGCATGGCCCGGGCCAATGGCTATTAGGGTCCAGCATAAAATTGGTTCGACATGGCACGAGCCTGTTATAAACCTGAAATGGAGAGGCACGACGAAGGGTTGAGGGCCGTGCATGAAAATCATTTAGAACTTGGCAAGAGCCTAGCATGAGCACAACGGGCCGATCTACACGTCGACACACTTATTAACTTATTTTTTAAACTATTAACAAAAATTCTTATAATTAGTAAAAGAGCTTGTTAGCACGACATGATCAAGCCGGGCACAACATATGGGATGGGCTATGCATGAGCCTTATTTATAGTAGAAAGGCGCAGGCTCAGGACAGACCATGCATGAGCCTTATTTATACTCCGTAGTAGAGAGGTGCGAACCATGCATGAGCCTTATTTATAGTATATAGACGCGAGCTTGCAACGTCATGACTTTCATTTGGCTCGTTTAGGCACGACCCGTTAGGACACGAGACAGGAGGGTATACGAGTACCGTAAATAACTAAAATAGAAATAGTTTATCAAAGAGAAAAACCAAAAGTAATAGAATGGTGAAAAAAATTCCTCTCTATCAAAAAATTTGGTGAACTTACGAACCGACCGGTTCAGTAACCAATCCGGCTTAGATAAAAATAAATGGAAAAATCCGGAAATCAAACCAAACCAAACCCCCATTTCCCAAATCCCAACGATAACATTTTGATTTCATGGTTTCAAAAATCAAAATTGCAGCTTTCTTCATTCATTTCTTGCATTCCCTTCTCCAATCTCCATTCTCATTCAACCTTTTTCTTTTCATCTTCTTCGCCATTCTTTCTCCTTCACATAG

mRNA sequence

ATGAGTGTTGTGTCAGGTTTGAGTTGGACTTCCAGTAAAGATAAAATGAACCAAGGAATTCTGCAATGGAATCCCTCTTCTCCAAACCCCCTCTCACCCTTTTCTCTCTCCTCATCCCTACCCTCAACAATCCCATTTTCCCTCAAATTCAGACGCATAACCCTAATCTCAGCAACCATAAAATCCCTCGAAGAAGAAGAGAACTTACCCGCAAAAGAGAGAAGAAAGCTTCGGAATGAGAGGAGAGAGAGTAAATCCTTCAATTGGAAAGAGGAAGTGGAGATGAAGCTCATTAAGAAGACTAAGAAGAGATATGGGTCGTGGATGGACGAGCTCAACCTTGATACTTTGGCCCAATTGGGCCCTCAATGGTGGGTTGCTCGGGTTTCTCGGGTTAATGGTCATGAGACTGCTGAAAAGCTTGCTCGTTCTCTAGCTAACAACTTCCATGAAAATGATTTTAAGCTTTATATGCCTGCAGTACAAGAGAAAAGGAAATTAAAGAGTGGTTCGTTATCAATCAAGTCAAAACCGCTATTTCCTGGATGCGTCTTTTTGAAGTGTGTGATGAACAAGGAGGTACATGACTTCATTAGAGAATTTGAAGGCATAGGAGGATTTGTTGGATCCAAAGTTGGAAACACGAAACGACAGATAAACAAACCCAGACCGGTATCTGAAGAAGACATGGAAATAATGTTTAAACAAGCAAAAGAAGAGCAGGAGAAAGCTGATCAAGCCTTCGAAGATGCTCAGAAATCAGTGATTAGCGCAGAGATGCCTCTTCTCGAGTCTGAGTCTGGTTCTCTGGAAACACTTATTGATGCAAATAAAAAAGGAACAACCAAGAAGATTTCAAAGTCTGCACCAAAAGAAAGAAAGAAAAAGATTCCGAAAATTGGTTCAACTGTTCGAGTTGTTTCTGGATCCTTTGCAGAGTTTTCAGGCATCCTCAAGAAGGTGGATAAAAAGAACGATAAGGTGACTGTCGGATTCACGTTATTTGGCAAGGAAACCATTGCCGACTTAGACATCAAAGAAATCGCAGAGGAGGCAGTGATTGCAGTCTTTCTTCATTCATTTCTTGCATTCCCTTCTCCAATCTCCATTCTCATTCAACCTTTTTCTTTTCATCTTCTTCGCCATTCTTTCTCCTTCACATAG

Coding sequence (CDS)

ATGAGTGTTGTGTCAGGTTTGAGTTGGACTTCCAGTAAAGATAAAATGAACCAAGGAATTCTGCAATGGAATCCCTCTTCTCCAAACCCCCTCTCACCCTTTTCTCTCTCCTCATCCCTACCCTCAACAATCCCATTTTCCCTCAAATTCAGACGCATAACCCTAATCTCAGCAACCATAAAATCCCTCGAAGAAGAAGAGAACTTACCCGCAAAAGAGAGAAGAAAGCTTCGGAATGAGAGGAGAGAGAGTAAATCCTTCAATTGGAAAGAGGAAGTGGAGATGAAGCTCATTAAGAAGACTAAGAAGAGATATGGGTCGTGGATGGACGAGCTCAACCTTGATACTTTGGCCCAATTGGGCCCTCAATGGTGGGTTGCTCGGGTTTCTCGGGTTAATGGTCATGAGACTGCTGAAAAGCTTGCTCGTTCTCTAGCTAACAACTTCCATGAAAATGATTTTAAGCTTTATATGCCTGCAGTACAAGAGAAAAGGAAATTAAAGAGTGGTTCGTTATCAATCAAGTCAAAACCGCTATTTCCTGGATGCGTCTTTTTGAAGTGTGTGATGAACAAGGAGGTACATGACTTCATTAGAGAATTTGAAGGCATAGGAGGATTTGTTGGATCCAAAGTTGGAAACACGAAACGACAGATAAACAAACCCAGACCGGTATCTGAAGAAGACATGGAAATAATGTTTAAACAAGCAAAAGAAGAGCAGGAGAAAGCTGATCAAGCCTTCGAAGATGCTCAGAAATCAGTGATTAGCGCAGAGATGCCTCTTCTCGAGTCTGAGTCTGGTTCTCTGGAAACACTTATTGATGCAAATAAAAAAGGAACAACCAAGAAGATTTCAAAGTCTGCACCAAAAGAAAGAAAGAAAAAGATTCCGAAAATTGGTTCAACTGTTCGAGTTGTTTCTGGATCCTTTGCAGAGTTTTCAGGCATCCTCAAGAAGGTGGATAAAAAGAACGATAAGGTGACTGTCGGATTCACGTTATTTGGCAAGGAAACCATTGCCGACTTAGACATCAAAGAAATCGCAGAGGAGGCAGTGATTGCAGTCTTTCTTCATTCATTTCTTGCATTCCCTTCTCCAATCTCCATTCTCATTCAACCTTTTTCTTTTCATCTTCTTCGCCATTCTTTCTCCTTCACATAG

Protein sequence

MSVVSGLSWTSSKDKMNQGILQWNPSSPNPLSPFSLSSSLPSTIPFSLKFRRITLISATIKSLEEEENLPAKERRKLRNERRESKSFNWKEEVEMKLIKKTKKRYGSWMDELNLDTLAQLGPQWWVARVSRVNGHETAEKLARSLANNFHENDFKLYMPAVQEKRKLKSGSLSIKSKPLFPGCVFLKCVMNKEVHDFIREFEGIGGFVGSKVGNTKRQINKPRPVSEEDMEIMFKQAKEEQEKADQAFEDAQKSVISAEMPLLESESGSLETLIDANKKGTTKKISKSAPKERKKKIPKIGSTVRVVSGSFAEFSGILKKVDKKNDKVTVGFTLFGKETIADLDIKEIAEEAVIAVFLHSFLAFPSPISILIQPFSFHLLRHSFSFT

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo12875	Spo12875	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo12875.1	Spo12875.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12875.1.exon.1	Spo12875.1.exon.1	exon
Spo12875.1.exon.2	Spo12875.1.exon.2	exon
Spo12875.1.exon.3	Spo12875.1.exon.3	exon
Spo12875.1.exon.4	Spo12875.1.exon.4	exon
Spo12875.1.exon.5	Spo12875.1.exon.5	exon
Spo12875.1.exon.6	Spo12875.1.exon.6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo12875.1.CDS.1	Spo12875.1.CDS.1	CDS
Spo12875.1.CDS.2	Spo12875.1.CDS.2	CDS
Spo12875.1.CDS.3	Spo12875.1.CDS.3	CDS
Spo12875.1.CDS.4	Spo12875.1.CDS.4	CDS
Spo12875.1.CDS.5	Spo12875.1.CDS.5	CDS
Spo12875.1.CDS.6	Spo12875.1.CDS.6	CDS

Homology

[Close]

BLAST of Spo12875.1 vs. NCBI nr
Match: gi|902235441|gb|KNA23911.1| (hypothetical protein SOVF_019550 isoform A [Spinacia oleracea])

HSP 1 Score: 651.7 bits (1680), Expect = 7.800e-184
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 1


		  
Query: 16  MNQGILQWNPSSPNPLSPFSLSSSLPSTIPFSLKFRRITLISATIKSLEEEENLPAKERR 75
           MNQGILQWNPSSPNPLSPFSLSSSLPSTIPFSLKFRRITLISATIKSLEEEENLPAKERR
Sbjct: 1   MNQGILQWNPSSPNPLSPFSLSSSLPSTIPFSLKFRRITLISATIKSLEEEENLPAKERR 60

Query: 76  KLRNERRESKSFNWKEEVEMKLIKKTKKRYGSWMDELNLDTLAQLGPQWWVARVSRVNGH 135
           KLRNERRESKSFNWKEEVEMKLIKKTKKRYGSWMDELNLDTLAQLGPQWWVARVSRVNGH
Sbjct: 61  KLRNERRESKSFNWKEEVEMKLIKKTKKRYGSWMDELNLDTLAQLGPQWWVARVSRVNGH 120

Query: 136 ETAEKLARSLANNFHENDFKLYMPAVQEKRKLKSGSLSIKSKPLFPGCVFLKCVMNKEVH 195
           ETAEKLARSLANNFHENDFKLYMPAVQEKRKLKSGSLSIKSKPLFPGCVFLKCVMNKEVH
Sbjct: 121 ETAEKLARSLANNFHENDFKLYMPAVQEKRKLKSGSLSIKSKPLFPGCVFLKCVMNKEVH 180

Query: 196 DFIREFEGIGGFVGSKVGNTKRQINKPRPVSEEDMEIMFKQAKEEQEKADQAFEDAQKSV 255
           DFIREFEGIGGFVGSKVGNTKRQINKPRPVSEEDMEIMFKQAKEEQEKADQAFEDAQKSV
Sbjct: 181 DFIREFEGIGGFVGSKVGNTKRQINKPRPVSEEDMEIMFKQAKEEQEKADQAFEDAQKSV 240

Query: 256 ISAEMPLLESESGSLETLIDANKKGTTKKISKSAPKERKKKIPKIGSTVRVVSGSFAEFS 315
           ISAEMPLLESESGSLETLIDANKKGTTKKISKSAPKERKKKIPKIGSTVRVVSGSFAEFS
Sbjct: 241 ISAEMPLLESESGSLETLIDANKKGTTKKISKSAPKERKKKIPKIGSTVRVVSGSFAEFS 300

Query: 316 GILKKVDKKNDKVTVGFTLFGKETIADLDIKEIAEEAVIAV 357
           GILKKVDKKNDKVTVGFTLFGKETIADLDIKEIAEEAVIAV
Sbjct: 301 GILKKVDKKNDKVTVGFTLFGKETIADLDIKEIAEEAVIAV 341

[Close]

BLAST of Spo12875.1 vs. NCBI nr
Match: gi|731363606|ref|XP_010693522.1| (PREDICTED: uncharacterized protein LOC104906463 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 486.5 bits (1251), Expect = 4.300e-134
Identity = 261/339 (76.99%), Postives = 289/339 (85.25%), Query Frame = 1


		  
Query: 16  MNQGILQWNPSSPNPLSPFSLSSSLPSTIPFSLKFRRITLISATIKSLEEE--ENLPAKE 75
           MNQGILQWNPSSPN  S   LSSSL S+IPF  KF+R TLISATIKS+EEE  E LPA+E
Sbjct: 1   MNQGILQWNPSSPNTQS---LSSSLLSSIPFIPKFKRFTLISATIKSVEEEKEEKLPARE 60

Query: 76  RRKLRNERRESKSFNWKEEVEMKLIKKTKKRYGSWMDELNLDTLAQLGPQWWVARVSRVN 135
           RRKLRNERRESKS+NWKEEVEMKLIKK KKRY SW +ELNLDTLAQLGPQWWVARVSRVN
Sbjct: 61  RRKLRNERRESKSYNWKEEVEMKLIKKPKKRYASWTEELNLDTLAQLGPQWWVARVSRVN 120

Query: 136 GHETAEKLARSLANNFHENDFKLYMPAVQEKRKLKSGSLSIKSKPLFPGCVFLKCVMNKE 195
             ET E+LARSLANN+ + DFKLYMPAVQEKRKLK+GS SIKSKPLFPGCVFL+CV+NKE
Sbjct: 121 SQETGERLARSLANNYPDIDFKLYMPAVQEKRKLKNGSYSIKSKPLFPGCVFLRCVLNKE 180

Query: 196 VHDFIREFEGIGGFVGSKVGNTKRQINKPRPVSEEDMEIMFKQAKEEQEKADQAFEDAQK 255
           +HDFIRE +GIG FVGSKVGNTK+QINKPRPVSE+DME +F+QAKEEQEKAD AF++ +K
Sbjct: 181 LHDFIREADGIGAFVGSKVGNTKKQINKPRPVSEDDMEKIFRQAKEEQEKADLAFQEEEK 240

Query: 256 SVISAEMPLLESESGSLETLIDANKKGTTKKISKSAPKERKKKIPKIGSTVRVVSGSFAE 315
            VI       +SE G LETL+D + K    KI  SAPKERKKK+ K+GST+RVVSGSFAE
Sbjct: 241 LVIR------QSEMGDLETLLDTSPKSRRNKIPVSAPKERKKKLAKVGSTIRVVSGSFAE 300

Query: 316 FSGILKKVDKKNDKVTVGFTLFGKETIADLDIKEIAEEA 353
           FSGILKKVD+KN  VTVGFTLFGKETIADLDI  I EEA
Sbjct: 301 FSGILKKVDQKNGMVTVGFTLFGKETIADLDINAIVEEA 330

[Close]

BLAST of Spo12875.1 vs. NCBI nr
Match: gi|225440570|ref|XP_002276763.1| (PREDICTED: uncharacterized protein LOC100264906 [Vitis vinifera])

HSP 1 Score: 361.7 bits (927), Expect = 1.600e-96
Identity = 208/348 (59.77%), Postives = 259/348 (74.43%), Query Frame = 1


		  
Query: 16  MNQGILQWNPSSPNPLSPFSLSSSLPST-IPFSLKFRRITLISATIKSLEEEENLPAKER 75
           M QG+L  NPS   P        SLPS   P S   +R T+IS ++ S +    L A+ER
Sbjct: 1   MKQGLLLCNPSYNAP--------SLPSLHFPISTA-KRTTVISVSLDSADTRP-LTARER 60

Query: 76  RKLRNERRESKSF-NWKEEVEMKLIKKTKKRYGSWMDELNLDTLAQLGPQWWVARVSRVN 135
           R+LRNERRESK+  NW+EEVE +L+KK KKRY SW +ELNLD LA LGPQWWV RVSRV+
Sbjct: 61  RQLRNERRESKATTNWREEVEERLLKKPKKRYASWTEELNLDNLALLGPQWWVVRVSRVS 120

Query: 136 GHETAEKLARSLANNFHENDFKLYMPAVQEKRKLKSGSLSIKSKPLFPGCVFLKCVMNKE 195
           G E+AE+LARSLA NF + DFK+Y+P+VQ KRKLK+GS+S+K KPLFPGCVFL+CV+NKE
Sbjct: 121 GQESAERLARSLARNFPDIDFKVYVPSVQVKRKLKNGSISVKPKPLFPGCVFLRCVLNKE 180

Query: 196 VHDFIREFEGIGGFVGSKVGNTKRQINKPRPVSEEDMEIMFKQAKEEQEKADQAFEDAQ- 255
            HDFIRE +GIGGFVGSKVGNTKRQINKPRPVS +D+E +FKQ+KEEQEKAD+AFE+ Q 
Sbjct: 181 THDFIRECDGIGGFVGSKVGNTKRQINKPRPVSVDDIEAIFKQSKEEQEKADKAFEEEQQ 240

Query: 256 -KSVISAE----MPLLESESGSLETLIDANKKGTTKKISK----SAPKERKKKIPKIGST 315
            +  I+ E     P L+S+  ++ +++D+  K  ++K SK     A   +  K+ K GST
Sbjct: 241 KEETINPEKLIIYPHLDSKDVTI-SVVDSKPKRRSRKASKPIADGASTAKHDKLLKPGST 300

Query: 316 VRVVSGSFAEFSGILKKVDKKNDKVTVGFTLFGKETIADLDIKEIAEE 352
           VRVVSG+F EFSG LKK+D+KN K TVGFTLFGKET+ DLD+ EI  E
Sbjct: 301 VRVVSGTFTEFSGSLKKLDRKNGKATVGFTLFGKETLVDLDVNEIVAE 337

[Close]

BLAST of Spo12875.1 vs. NCBI nr
Match: gi|590628834|ref|XP_007026825.1| (Plastid transcriptionally active isoform 1 [Theobroma cacao])

HSP 1 Score: 357.8 bits (917), Expect = 2.300e-95
Identity = 197/345 (57.10%), Postives = 257/345 (74.49%), Query Frame = 1


		  
Query: 16  MNQGILQWNPSSPNPLSPFSLSSSLPSTIPFSLKFRRITLISATIKSLE---EEENLPAK 75
           M QG+L W+P   +PLS  SLS  +PST        ++  ISA+I S +    ++ L A+
Sbjct: 1   MKQGLLLWSPCYLSPLSFHSLSHRIPST----KHAPQLPPISASIDSTDTQQRQQQLSAR 60

Query: 76  ERRKLRNERRESKS-FNWKEEVEMKLIKKTKKRYGSWMDELNLDTLAQLGPQWWVARVSR 135
           ERR+LRNERRESK+ ++W+EEVE +LIKK KKRY SW +ELNLD LA LGPQWWV RV+R
Sbjct: 61  ERRQLRNERRESKAGYSWREEVEERLIKKPKKRYTSWTEELNLDNLAHLGPQWWVVRVAR 120

Query: 136 VNGHETAEKLARSLANNFHENDFKLYMPAVQEKRKLKSGSLSIKSKPLFPGCVFLKCVMN 195
           + G ETAE +ARSLA NF + +FK+Y PAVQEK++LK+GS+SIK KPLFPGCVFLKCV+N
Sbjct: 121 IRGLETAEVVARSLARNFPDIEFKMYTPAVQEKKRLKNGSISIKPKPLFPGCVFLKCVLN 180

Query: 196 KEVHDFIREFEGIGGFVGSKVGNTKRQINKPRPVSEEDMEIMFKQAKEEQEKADQAFEDA 255
           KE+HDFIRE +G+GGFVGSKVGNTKRQINKPRPVS++DME +FKQAKEEQEKADQAF++ 
Sbjct: 181 KEIHDFIRECDGVGGFVGSKVGNTKRQINKPRPVSDDDMEAIFKQAKEEQEKADQAFQEE 240

Query: 256 Q--KSVISAEMPLLE---SESGSLETLIDANKKGTTKKISKSAPKERKKKIPKIGSTVRV 315
           Q  +  ++A+   +E     +G   +++D+  K  ++K   +     K      GS VRV
Sbjct: 241 QEGEKTLTADKLNVEYNLDSNGVTTSILDSKPKRQSRKRYDTVANRAKSSKLVPGSMVRV 300

Query: 316 VSGSFAEFSGILKKVDKKNDKVTVGFTLFGKETIADLDIKEIAEE 352
           VSG+FAEF G L+K+++K  K TVGFTLFGKE++ +LD+K+I  E
Sbjct: 301 VSGTFAEFLGSLEKLNRKTGKATVGFTLFGKESLVELDVKDIVLE 341

[Close]

BLAST of Spo12875.1 vs. NCBI nr
Match: gi|460401718|ref|XP_004246364.1| (PREDICTED: uncharacterized protein LOC101260563 [Solanum lycopersicum])

HSP 1 Score: 357.5 bits (916), Expect = 3.000e-95
Identity = 204/347 (58.79%), Postives = 252/347 (72.62%), Query Frame = 1


		  
Query: 16  MNQGILQWNPSSP--NPLSPFSLSSSLPSTIPFSLKFRRITLISATIKSLEEEENLPAKE 75
           M Q +L W+   P    LSP S+   LP T    L+      + AT++S  EE  L AKE
Sbjct: 1   MKQAVLSWSHCPPFLPKLSPISI---LPKTQKTLLR------VYATVES-PEENLLTAKE 60

Query: 76  RRKLRNERRESKS-FNWKEEVEMKLIKKTKKRYGSWMDELNLDTLAQLGPQWWVARVSRV 135
           RR++RNERRESK+ +NW+EEVE KLIKK KK+Y SW +ELNLD LA+LGPQWWV RVSRV
Sbjct: 61  RRQMRNERRESKTGYNWREEVEEKLIKKPKKQYKSWTEELNLDNLAKLGPQWWVVRVSRV 120

Query: 136 NGHETAEKLARSLANNFHENDFKLYMPAVQEKRKLKSGSLSIKSKPLFPGCVFLKCVMNK 195
           NGHETAE++AR+LA NF + DF++Y+P+VQ KRKLK+G+LSIK KPLFPGCVFL+CV+NK
Sbjct: 121 NGHETAERMARALARNFPDIDFQVYIPSVQVKRKLKNGTLSIKPKPLFPGCVFLRCVLNK 180

Query: 196 EVHDFIREFEGIGGFVGSKVGNTKRQINKPRPVSEEDMEIMFKQAKEEQEKADQAFEDAQ 255
           E+HDFIRE  GIGGFVGSKVGNTKRQINKPRPV E+D+E +FKQAKEEQEKADQAFE+ +
Sbjct: 181 EIHDFIRECTGIGGFVGSKVGNTKRQINKPRPVDEDDLEAIFKQAKEEQEKADQAFEEEE 240

Query: 256 KSVISAEMPLLESES-GSLETLIDANKKGTTKK-------ISKSAPKERKKKIPKIGSTV 315
           +     +  L ++ S  +L+      K+G   K       +      + K  IP  GST+
Sbjct: 241 QGEGGLDSKLTKNSSIATLDDKAVPKKRGRQSKKASDLLAVDALRGSDDKSLIP--GSTI 300

Query: 316 RVVSGSFAEFSGILKKVDKKNDKVTVGFTLFGKETIADLDIKEIAEE 352
            VVSG+FA FSGILKKVD K    TVGF+LFGKET+AD+D+KEI  E
Sbjct: 301 EVVSGAFAGFSGILKKVDSKAGLATVGFSLFGKETLADIDVKEIVAE 335

[Close]

BLAST of Spo12875.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWM0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_019550 PE=4 SV=1)

HSP 1 Score: 651.7 bits (1680), Expect = 5.400e-184
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 1


		  
Query: 16  MNQGILQWNPSSPNPLSPFSLSSSLPSTIPFSLKFRRITLISATIKSLEEEENLPAKERR 75
           MNQGILQWNPSSPNPLSPFSLSSSLPSTIPFSLKFRRITLISATIKSLEEEENLPAKERR
Sbjct: 1   MNQGILQWNPSSPNPLSPFSLSSSLPSTIPFSLKFRRITLISATIKSLEEEENLPAKERR 60

Query: 76  KLRNERRESKSFNWKEEVEMKLIKKTKKRYGSWMDELNLDTLAQLGPQWWVARVSRVNGH 135
           KLRNERRESKSFNWKEEVEMKLIKKTKKRYGSWMDELNLDTLAQLGPQWWVARVSRVNGH
Sbjct: 61  KLRNERRESKSFNWKEEVEMKLIKKTKKRYGSWMDELNLDTLAQLGPQWWVARVSRVNGH 120

Query: 136 ETAEKLARSLANNFHENDFKLYMPAVQEKRKLKSGSLSIKSKPLFPGCVFLKCVMNKEVH 195
           ETAEKLARSLANNFHENDFKLYMPAVQEKRKLKSGSLSIKSKPLFPGCVFLKCVMNKEVH
Sbjct: 121 ETAEKLARSLANNFHENDFKLYMPAVQEKRKLKSGSLSIKSKPLFPGCVFLKCVMNKEVH 180

Query: 196 DFIREFEGIGGFVGSKVGNTKRQINKPRPVSEEDMEIMFKQAKEEQEKADQAFEDAQKSV 255
           DFIREFEGIGGFVGSKVGNTKRQINKPRPVSEEDMEIMFKQAKEEQEKADQAFEDAQKSV
Sbjct: 181 DFIREFEGIGGFVGSKVGNTKRQINKPRPVSEEDMEIMFKQAKEEQEKADQAFEDAQKSV 240

Query: 256 ISAEMPLLESESGSLETLIDANKKGTTKKISKSAPKERKKKIPKIGSTVRVVSGSFAEFS 315
           ISAEMPLLESESGSLETLIDANKKGTTKKISKSAPKERKKKIPKIGSTVRVVSGSFAEFS
Sbjct: 241 ISAEMPLLESESGSLETLIDANKKGTTKKISKSAPKERKKKIPKIGSTVRVVSGSFAEFS 300

Query: 316 GILKKVDKKNDKVTVGFTLFGKETIADLDIKEIAEEAVIAV 357
           GILKKVDKKNDKVTVGFTLFGKETIADLDIKEIAEEAVIAV
Sbjct: 301 GILKKVDKKNDKVTVGFTLFGKETIADLDIKEIAEEAVIAV 341

[Close]

BLAST of Spo12875.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BGF9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g066690 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 3.000e-134
Identity = 261/339 (76.99%), Postives = 289/339 (85.25%), Query Frame = 1


		  
Query: 16  MNQGILQWNPSSPNPLSPFSLSSSLPSTIPFSLKFRRITLISATIKSLEEE--ENLPAKE 75
           MNQGILQWNPSSPN  S   LSSSL S+IPF  KF+R TLISATIKS+EEE  E LPA+E
Sbjct: 1   MNQGILQWNPSSPNTQS---LSSSLLSSIPFIPKFKRFTLISATIKSVEEEKEEKLPARE 60

Query: 76  RRKLRNERRESKSFNWKEEVEMKLIKKTKKRYGSWMDELNLDTLAQLGPQWWVARVSRVN 135
           RRKLRNERRESKS+NWKEEVEMKLIKK KKRY SW +ELNLDTLAQLGPQWWVARVSRVN
Sbjct: 61  RRKLRNERRESKSYNWKEEVEMKLIKKPKKRYASWTEELNLDTLAQLGPQWWVARVSRVN 120

Query: 136 GHETAEKLARSLANNFHENDFKLYMPAVQEKRKLKSGSLSIKSKPLFPGCVFLKCVMNKE 195
             ET E+LARSLANN+ + DFKLYMPAVQEKRKLK+GS SIKSKPLFPGCVFL+CV+NKE
Sbjct: 121 SQETGERLARSLANNYPDIDFKLYMPAVQEKRKLKNGSYSIKSKPLFPGCVFLRCVLNKE 180

Query: 196 VHDFIREFEGIGGFVGSKVGNTKRQINKPRPVSEEDMEIMFKQAKEEQEKADQAFEDAQK 255
           +HDFIRE +GIG FVGSKVGNTK+QINKPRPVSE+DME +F+QAKEEQEKAD AF++ +K
Sbjct: 181 LHDFIREADGIGAFVGSKVGNTKKQINKPRPVSEDDMEKIFRQAKEEQEKADLAFQEEEK 240

Query: 256 SVISAEMPLLESESGSLETLIDANKKGTTKKISKSAPKERKKKIPKIGSTVRVVSGSFAE 315
            VI       +SE G LETL+D + K    KI  SAPKERKKK+ K+GST+RVVSGSFAE
Sbjct: 241 LVIR------QSEMGDLETLLDTSPKSRRNKIPVSAPKERKKKLAKVGSTIRVVSGSFAE 300

Query: 316 FSGILKKVDKKNDKVTVGFTLFGKETIADLDIKEIAEEA 353
           FSGILKKVD+KN  VTVGFTLFGKETIADLDI  I EEA
Sbjct: 301 FSGILKKVDQKNGMVTVGFTLFGKETIADLDINAIVEEA 330

[Close]

BLAST of Spo12875.1 vs. UniProtKB/TrEMBL
Match: D7THD2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g01610 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.100e-96
Identity = 208/348 (59.77%), Postives = 259/348 (74.43%), Query Frame = 1


		  
Query: 16  MNQGILQWNPSSPNPLSPFSLSSSLPST-IPFSLKFRRITLISATIKSLEEEENLPAKER 75
           M QG+L  NPS   P        SLPS   P S   +R T+IS ++ S +    L A+ER
Sbjct: 1   MKQGLLLCNPSYNAP--------SLPSLHFPISTA-KRTTVISVSLDSADTRP-LTARER 60

Query: 76  RKLRNERRESKSF-NWKEEVEMKLIKKTKKRYGSWMDELNLDTLAQLGPQWWVARVSRVN 135
           R+LRNERRESK+  NW+EEVE +L+KK KKRY SW +ELNLD LA LGPQWWV RVSRV+
Sbjct: 61  RQLRNERRESKATTNWREEVEERLLKKPKKRYASWTEELNLDNLALLGPQWWVVRVSRVS 120

Query: 136 GHETAEKLARSLANNFHENDFKLYMPAVQEKRKLKSGSLSIKSKPLFPGCVFLKCVMNKE 195
           G E+AE+LARSLA NF + DFK+Y+P+VQ KRKLK+GS+S+K KPLFPGCVFL+CV+NKE
Sbjct: 121 GQESAERLARSLARNFPDIDFKVYVPSVQVKRKLKNGSISVKPKPLFPGCVFLRCVLNKE 180

Query: 196 VHDFIREFEGIGGFVGSKVGNTKRQINKPRPVSEEDMEIMFKQAKEEQEKADQAFEDAQ- 255
            HDFIRE +GIGGFVGSKVGNTKRQINKPRPVS +D+E +FKQ+KEEQEKAD+AFE+ Q 
Sbjct: 181 THDFIRECDGIGGFVGSKVGNTKRQINKPRPVSVDDIEAIFKQSKEEQEKADKAFEEEQQ 240

Query: 256 -KSVISAE----MPLLESESGSLETLIDANKKGTTKKISK----SAPKERKKKIPKIGST 315
            +  I+ E     P L+S+  ++ +++D+  K  ++K SK     A   +  K+ K GST
Sbjct: 241 KEETINPEKLIIYPHLDSKDVTI-SVVDSKPKRRSRKASKPIADGASTAKHDKLLKPGST 300

Query: 316 VRVVSGSFAEFSGILKKVDKKNDKVTVGFTLFGKETIADLDIKEIAEE 352
           VRVVSG+F EFSG LKK+D+KN K TVGFTLFGKET+ DLD+ EI  E
Sbjct: 301 VRVVSGTFTEFSGSLKKLDRKNGKATVGFTLFGKETLVDLDVNEIVAE 337

[Close]

BLAST of Spo12875.1 vs. UniProtKB/TrEMBL
Match: A0A061ESG1_THECC (Plastid transcriptionally active isoform 1 OS=Theobroma cacao GN=TCM_021788 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.600e-95
Identity = 197/345 (57.10%), Postives = 257/345 (74.49%), Query Frame = 1


		  
Query: 16  MNQGILQWNPSSPNPLSPFSLSSSLPSTIPFSLKFRRITLISATIKSLE---EEENLPAK 75
           M QG+L W+P   +PLS  SLS  +PST        ++  ISA+I S +    ++ L A+
Sbjct: 1   MKQGLLLWSPCYLSPLSFHSLSHRIPST----KHAPQLPPISASIDSTDTQQRQQQLSAR 60

Query: 76  ERRKLRNERRESKS-FNWKEEVEMKLIKKTKKRYGSWMDELNLDTLAQLGPQWWVARVSR 135
           ERR+LRNERRESK+ ++W+EEVE +LIKK KKRY SW +ELNLD LA LGPQWWV RV+R
Sbjct: 61  ERRQLRNERRESKAGYSWREEVEERLIKKPKKRYTSWTEELNLDNLAHLGPQWWVVRVAR 120

Query: 136 VNGHETAEKLARSLANNFHENDFKLYMPAVQEKRKLKSGSLSIKSKPLFPGCVFLKCVMN 195
           + G ETAE +ARSLA NF + +FK+Y PAVQEK++LK+GS+SIK KPLFPGCVFLKCV+N
Sbjct: 121 IRGLETAEVVARSLARNFPDIEFKMYTPAVQEKKRLKNGSISIKPKPLFPGCVFLKCVLN 180

Query: 196 KEVHDFIREFEGIGGFVGSKVGNTKRQINKPRPVSEEDMEIMFKQAKEEQEKADQAFEDA 255
           KE+HDFIRE +G+GGFVGSKVGNTKRQINKPRPVS++DME +FKQAKEEQEKADQAF++ 
Sbjct: 181 KEIHDFIRECDGVGGFVGSKVGNTKRQINKPRPVSDDDMEAIFKQAKEEQEKADQAFQEE 240

Query: 256 Q--KSVISAEMPLLE---SESGSLETLIDANKKGTTKKISKSAPKERKKKIPKIGSTVRV 315
           Q  +  ++A+   +E     +G   +++D+  K  ++K   +     K      GS VRV
Sbjct: 241 QEGEKTLTADKLNVEYNLDSNGVTTSILDSKPKRQSRKRYDTVANRAKSSKLVPGSMVRV 300

Query: 316 VSGSFAEFSGILKKVDKKNDKVTVGFTLFGKETIADLDIKEIAEE 352
           VSG+FAEF G L+K+++K  K TVGFTLFGKE++ +LD+K+I  E
Sbjct: 301 VSGTFAEFLGSLEKLNRKTGKATVGFTLFGKESLVELDVKDIVLE 341

[Close]

BLAST of Spo12875.1 vs. UniProtKB/TrEMBL
Match: K4CRK9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 2.100e-95
Identity = 204/347 (58.79%), Postives = 252/347 (72.62%), Query Frame = 1


		  
Query: 16  MNQGILQWNPSSP--NPLSPFSLSSSLPSTIPFSLKFRRITLISATIKSLEEEENLPAKE 75
           M Q +L W+   P    LSP S+   LP T    L+      + AT++S  EE  L AKE
Sbjct: 1   MKQAVLSWSHCPPFLPKLSPISI---LPKTQKTLLR------VYATVES-PEENLLTAKE 60

Query: 76  RRKLRNERRESKS-FNWKEEVEMKLIKKTKKRYGSWMDELNLDTLAQLGPQWWVARVSRV 135
           RR++RNERRESK+ +NW+EEVE KLIKK KK+Y SW +ELNLD LA+LGPQWWV RVSRV
Sbjct: 61  RRQMRNERRESKTGYNWREEVEEKLIKKPKKQYKSWTEELNLDNLAKLGPQWWVVRVSRV 120

Query: 136 NGHETAEKLARSLANNFHENDFKLYMPAVQEKRKLKSGSLSIKSKPLFPGCVFLKCVMNK 195
           NGHETAE++AR+LA NF + DF++Y+P+VQ KRKLK+G+LSIK KPLFPGCVFL+CV+NK
Sbjct: 121 NGHETAERMARALARNFPDIDFQVYIPSVQVKRKLKNGTLSIKPKPLFPGCVFLRCVLNK 180

Query: 196 EVHDFIREFEGIGGFVGSKVGNTKRQINKPRPVSEEDMEIMFKQAKEEQEKADQAFEDAQ 255
           E+HDFIRE  GIGGFVGSKVGNTKRQINKPRPV E+D+E +FKQAKEEQEKADQAFE+ +
Sbjct: 181 EIHDFIRECTGIGGFVGSKVGNTKRQINKPRPVDEDDLEAIFKQAKEEQEKADQAFEEEE 240

Query: 256 KSVISAEMPLLESES-GSLETLIDANKKGTTKK-------ISKSAPKERKKKIPKIGSTV 315
           +     +  L ++ S  +L+      K+G   K       +      + K  IP  GST+
Sbjct: 241 QGEGGLDSKLTKNSSIATLDDKAVPKKRGRQSKKASDLLAVDALRGSDDKSLIP--GSTI 300

Query: 316 RVVSGSFAEFSGILKKVDKKNDKVTVGFTLFGKETIADLDIKEIAEE 352
            VVSG+FA FSGILKKVD K    TVGF+LFGKET+AD+D+KEI  E
Sbjct: 301 EVVSGAFAGFSGILKKVDSKAGLATVGFSLFGKETLADIDVKEIVAE 335

[Close]

BLAST of Spo12875.1 vs. TAIR (Arabidopsis)
Match: AT3G09210.1 (plastid transcriptionally active 13)

HSP 1 Score: 338.6 bits (867), Expect = 5.100e-93
Identity = 184/343 (53.64%), Postives = 247/343 (72.01%), Query Frame = 1


		  
Query: 15  KMNQGILQWNPSSPNPLSPFSLSSSLPSTIPFSLKFRRITLISATIKSLEEEENLPAKER 74
           K+  G+LQW+ SS  P    S+ + +  T  FS        I+A +  +E    L AKER
Sbjct: 3   KLQGGLLQWSRSSLIP----SIYTPINKT-QFS--------IAACV--IERNHQLTAKER 62

Query: 75  RKLRNERRESK-SFNWKEEVEMKLIKKTKKRYGSWMDELNLDTLAQLGPQWWVARVSRVN 134
           R+LRNERRESK  ++W+EEVE KLIKK KKRY +W +ELNLDTLA+ GPQWW  RVSR+ 
Sbjct: 63  RQLRNERRESKLGYSWREEVEEKLIKKPKKRYATWTEELNLDTLAESGPQWWAVRVSRLR 122

Query: 135 GHETAEKLARSLANNFHENDFKLYMPAVQEKRKLKSGSLSIKSKPLFPGCVFLKCVMNKE 194
           GHETA+ LAR+LA  F E +F +Y P+VQ KRKLK+GS+S+K KP+FPGC+F++C++NKE
Sbjct: 123 GHETAQILARALARQFPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKE 182

Query: 195 VHDFIREFEGIGGFVGSKVGNTKRQINKPRPVSEEDMEIMFKQAKEEQEKADQAFEDAQK 254
           +HD IR+ +G+GGF+GSKVGNTKRQINKPRPV + D+E +FKQAKE QEKAD  FE+A +
Sbjct: 183 IHDSIRDVDGVGGFIGSKVGNTKRQINKPRPVDDSDLEAIFKQAKEAQEKADSEFEEADR 242

Query: 255 -----SVISAEMPLLESESGSLETLIDANKKGTTKKISKSAPKERKKKIPKIGSTVRVVS 314
                S+++++  L  S S  +ET+ ++  K   +K + +   + KKK    GSTVRV+S
Sbjct: 243 AEEEASILASQELLALSNSDVIETVAESKPKRAPRKATLATETKAKKKKLAAGSTVRVLS 302

Query: 315 GSFAEFSGILKKVDKKNDKVTVGFTLFGKETIADLDIKEIAEE 352
           G+FAEF G LKK+++K  K TVGFTLFGKET+ ++DI E+  E
Sbjct: 303 GTFAEFVGNLKKLNRKTAKATVGFTLFGKETLVEIDINELVPE 330

The following BLAST results are available for this feature:

BLAST of Spo12875.1 vs. NCBI nr
BLAST of Spo12875.1 vs. UniProtKB/TrEMBL
BLAST of Spo12875.1 vs. ExPASy Swiss-Prot
BLAST of Spo12875.1 vs. TAIR (Arabidopsis)

BLAST of Spo12875.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902235441\|gb\|KNA23911.1\|	7.8e-184	100.	hypothetical protein SOVF_0195...	[more]
gi\|731363606\|ref\|XP_010693522.1\|	4.3e-134	76.9	PREDICTED: uncharacterized pro...	[more]
gi\|225440570\|ref\|XP_002276763.1\|	1.6e-96	59.7	PREDICTED: uncharacterized pro...	[more]
gi\|590628834\|ref\|XP_007026825.1\|	2.3e-95	57.1	Plastid transcriptionally acti...	[more]
gi\|460401718\|ref\|XP_004246364.1\|	3.0e-95	58.7	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo12875.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RWM0_SPIOL	5.4e-184	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BGF9_BETVU	3.0e-134	76.9	Uncharacterized protein OS=Bet...	[more]
D7THD2_VITVI	1.1e-96	59.7	Putative uncharacterized prote...	[more]
A0A061ESG1_THECC	1.6e-95	57.1	Plastid transcriptionally acti...	[more]
K4CRK9_SOLLC	2.1e-95	58.7	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo12875.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo12875.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G09210.1	5.1e-93	53.6	plastid transcriptionally acti...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005824	KOW	PFAM	PF00467	KOW	coord: 301..330 score: 6.
IPR005824	KOW	SMART	SM00739	kow_9	coord: 297..324 score: 1.
IPR006645	NusG, N-terminal	GENE3D	3.30.70.940		coord: 123..240 score: 1.9
IPR006645	NusG, N-terminal	PFAM	PF02357	NusG	coord: 124..233 score: 3.1
IPR006645	NusG, N-terminal	SMART	SM00738	nusgn_4	coord: 121..237 score: 1.6
IPR006645	NusG, N-terminal	unknown	SSF82679	N-utilization substance G protein NusG, N-terminal domain	coord: 122..239 score: 2.75
IPR008991	Translation protein SH3-like domain	unknown	SSF50104	Translation proteins SH3-like domain	coord: 299..349 score: 9.63
IPR014722	Ribosomal protein L2 domain 2	GENE3D	2.30.30.30		coord: 299..349 score: 1.7
None	No IPR available	unknown	Coil	Coil	coord: 234..254 scor
None	No IPR available	PANTHER	PTHR30265	RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSG	coord: 297..349 score: 1.5E-81coord: 34..271 score: 1.5
None	No IPR available	PANTHER	PTHR30265:SF2	TRANSCRIPTION TERMINATION/ANTITERMINATION PROTEIN NUSG	coord: 297..349 score: 1.5E-81coord: 34..271 score: 1.5

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008654	phospholipid biosynthetic process
biological_process	GO:0009657	plastid organization
cellular_component	GO:0009295	nucleoid