Spo13061.1 (mRNA)

Overview
NameSpo13061.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
Description60S ribosomal protein L30
LocationSpoScf_00561 : 352006 .. 354512 (-)
Sequence length973
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAGGGAGAGCCCAACATAAAACTCTTACTAGTATGAGTCAGCTTTTGTTCACTCGTTCCTGTGTTGTTCATCTTTATTTTTGAAGCATTCTCTCCCTCACCAGGCGCCGCCGCCGCCGACGTCGAGATGGCTCCATCTAAGAAGACGGTAGCCCTAACTTTCTCTCTCGAATATTCTCATCATCGTTTCCCTTTTCATTTACTTGATTGATGATAAAATCAAAAATTAATGGAGGTTGGTTGAATTTGCAGAAGAAGACTCATGAGAGCATCAACAACAGGTTGGCTCTTGTCATGAAGAGTGGCAAGTTCACTCTTGGTTACAAAACGGTCCTCAAAACCCTTAGATCTTCAAAGGGTAAACCCTGTCCTTTTAACATTTCCCAGTTTGTACATTTTTGCAATTTTTTTTTGTAAAAGGTCCCTGTTTCCTTGTTCTATTTTTTAAGAAATGACGTATAAAACTGTATTATTGTATGATATTAACCTGATTGGGGTTATTTAGATCTGCGTGTATTTAAAATTTCGGGGTAATTGTTCATTTTCTGGATTTTAAGTAAGGGTTCAGTTTAGGGTTTTGGAGTTTGTAGCTTTGTTAATATGTTAATATTCAATTCTTGGCATCGTAGATTTGTAAAATCGCAACATTTTATTTGAAACTTGATTTGTGAAATTACTGATCTTCAGTGGTTTTCAGCTGATAGGTTTAGCATACTCGACAATTGGTTATAGTACACATTGTTTAGAAAAGAATCAATGATGTGTCTAGTGTACTACGGAGTAGTGCTGTAGCGTTCTAGTGTTCTAGTGCTGTAGCGTTCTAGTGTTCTAGTGCTGTAGCGTTCTAGTATTACAGGGCTGTATCAGATTAAGCCAGCAAAGTGATAACATCAAACTATGTCGAGAGCTTTACAGATAGTCCACCCTAGCATGCCTAGTTAGAACAAAATAGAACCTTGCTTGCCCCTCACTTTCTTGGTTTCTTTGTTTAGGATCACTCTAACGTGTATAGAACAAGACAACATTTTGCATTCATTGGATATAACTGCTGGGAAAATCTGGTTACTGGATGCATGTTTGGTCTTCTATTATAGTGGTTCGTAGGTTGATATTTATATAATTGTTATTTTTTACGAGGTTTCTGATTAGAATTATGGAGTTATACTGGTGTGAATGTTCGCAGTAATGTAGTGTTTTGGTCAATACTATGTTATAACATTGATACTTTACTTTAATTTGTTAGAATATTTATGGGGAATAGGGGAGAAATTGCAATTTTTTTGTATCTTTTGGCTATGATTTGTATTGCTAAACTGTGCAAGATAGGGTATAGAAACATTTTGTTGAGATGGTTCGGAAATGTTTTGTTGATGCTGTACTCTGGGTTGTGACGGCCTGATTGTTTGCAGTCATGTATAATTGGTGTTGTTGGATATGTGGTTTATTCTACTTTTTATTGCCCATTTCGTCAATGTTGCCATCGAATTAGTCTTAGTTTGGTCTCACATTTATTGGGTTTCCTGTTTCATGGCTTTTTGAATTTGGTGTAAGATCTTTTTTTAAAAAATTGAACTTGCTGTTTTATTCTTGACTTGTGTGAAATGTAATGGTAAGATATGCACTTGTTATTTCTTTCAGCAAAGTTGATCATCATCTCAAACAATTGCCCACCCCTAAGGAAGTCTGAGATTGAGTACTATGCTATGTTGGCTAAGGTCGGAGTTCACCATTACAACGGAAGTAAGTGTTTCTTGGTATTGAATGGTATTTTGTTATTAATAAACCTTCCTTTGATATTTAGACATGTTTTTATCTGATTCCTTGTCTTGAATTCTCTCCCCGAACCCAATGTCAGTAGGATGTTAAACTTATGATGATGTTGGTTTACAGACAATGTTGATCTTGGAACTGCTTGCGGGAAGTATTACAGGGTGTGCTGCCTCAGCATTATTGATGCAGGTGACTCAGATATCATCAAGAGCATGCCCGACCACTAAATTTGCTGCCTTGTAGAAAGAAGTTTTGAGGTTTATTCATAGGAGCTTTGTTTCTGTTTCAGTCTCTTGGACCCGTTTGTTTGTAGACATTCGACTTCTATAGATTCATGTATCTCGTTTAAACTTGGATGCCACTTTTCTCTTGTGCTCTTTTGATATGAGTCTCTTGCTGATCAAGTAATATGGGTTTACAATGGTCTGTCACTGTTGTCATGAACTCATTGGTTGGGACACTGATGGACTCCTCTAAGCTATATCCCATGTTTTTATTAACGTCTGAAACTTTCTCATATGCACAAGTCCAACATTCCGTCAATTTGGAGTAGTCGAGTAGACCTACTACATGTATGTAGATCATTTGACCTTTTTATTAACGTCTGAAACTAACTTGAGGTTTGGTGTTTGATCCTTGCTTCTACCTCTTTGGGTGTAATATTTTAACGTGGAAGTTACTAAAAAGATAATGTAATTCCTAAAAATACAGCCATAAATGGTATACGTAACTCCCG

mRNA sequence

GAAAGGGAGAGCCCAACATAAAACTCTTACTAGTATGAGTCAGCTTTTGTTCACTCGTTCCTGTGTTGTTCATCTTTATTTTTGAAGCATTCTCTCCCTCACCAGGCGCCGCCGCCGCCGACGTCGAGATGGCTCCATCTAAGAAGACGAAGAAGACTCATGAGAGCATCAACAACAGGTTGGCTCTTGTCATGAAGAGTGGCAAGTTCACTCTTGGTTACAAAACGGTCCTCAAAACCCTTAGATCTTCAAAGGCAAAGTTGATCATCATCTCAAACAATTGCCCACCCCTAAGGAAGTCTGAGATTGAGTACTATGCTATGTTGGCTAAGGTCGGAGTTCACCATTACAACGGAAACAATGTTGATCTTGGAACTGCTTGCGGGAAGTATTACAGGGTGTGCTGCCTCAGCATTATTGATGCAGGTGACTCAGATATCATCAAGAGCATGCCCGACCACTAAATTTGCTGCCTTGTAGAAAGAAGTTTTGAGGTTTATTCATAGGAGCTTTGTTTCTGTTTCAGTCTCTTGGACCCGTTTGTTTGTAGACATTCGACTTCTATAGATTCATGTATCTCGTTTAAACTTGGATGCCACTTTTCTCTTGTGCTCTTTTGATATGAGTCTCTTGCTGATCAAGTAATATGGGTTTACAATGGTCTGTCACTGTTGTCATGAACTCATTGGTTGGGACACTGATGGACTCCTCTAAGCTATATCCCATGTTTTTATTAACGTCTGAAACTTTCTCATATGCACAAGTCCAACATTCCGTCAATTTGGAGTAGTCGAGTAGACCTACTACATGTATGTAGATCATTTGACCTTTTTATTAACGTCTGAAACTAACTTGAGGTTTGGTGTTTGATCCTTGCTTCTACCTCTTTGGGTGTAATATTTTAACGTGGAAGTTACTAAAAAGATAATGTAATTCCTAAAAATACAGCCATAAATGGTATACGTAACTCCCG

Coding sequence (CDS)

ATGGCTCCATCTAAGAAGACGAAGAAGACTCATGAGAGCATCAACAACAGGTTGGCTCTTGTCATGAAGAGTGGCAAGTTCACTCTTGGTTACAAAACGGTCCTCAAAACCCTTAGATCTTCAAAGGCAAAGTTGATCATCATCTCAAACAATTGCCCACCCCTAAGGAAGTCTGAGATTGAGTACTATGCTATGTTGGCTAAGGTCGGAGTTCACCATTACAACGGAAACAATGTTGATCTTGGAACTGCTTGCGGGAAGTATTACAGGGTGTGCTGCCTCAGCATTATTGATGCAGGTGACTCAGATATCATCAAGAGCATGCCCGACCACTAA

Protein sequence

MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMPDH
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo13061Spo13061gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo13061.1Spo13061.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo13061.1.utr5p.1Spo13061.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo13061.1.CDS.4Spo13061.1.CDS.4CDS
Spo13061.1.CDS.3Spo13061.1.CDS.3CDS
Spo13061.1.CDS.2Spo13061.1.CDS.2CDS
Spo13061.1.CDS.1Spo13061.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo13061.1.utr3p.1Spo13061.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo13061.1.exon.4Spo13061.1.exon.4exon
Spo13061.1.exon.3Spo13061.1.exon.3exon
Spo13061.1.exon.2Spo13061.1.exon.2exon
Spo13061.1.exon.1Spo13061.1.exon.1exon


Homology
BLAST of Spo13061.1 vs. NCBI nr
Match: gi|902209349|gb|KNA16188.1| (hypothetical protein SOVF_091420, partial [Spinacia oleracea])

HSP 1 Score: 227.6 bits (579), Expect = 1.000e-56
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI
Sbjct: 14  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 73

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMPDH 112
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMPDH
Sbjct: 74  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMPDH 124

BLAST of Spo13061.1 vs. NCBI nr
Match: gi|902197326|gb|KNA13384.1| (hypothetical protein SOVF_117400 [Spinacia oleracea])

HSP 1 Score: 227.6 bits (579), Expect = 1.000e-56
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI
Sbjct: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMPDH 112
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMPDH
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMPDH 111

BLAST of Spo13061.1 vs. NCBI nr
Match: gi|731348503|ref|XP_010685518.1| (PREDICTED: 60S ribosomal protein L30 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 213.8 bits (543), Expect = 1.600e-52
Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           M  SKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLR+SKAKLIIISNNCPPLRKSEI
Sbjct: 1   MVSSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRTSKAKLIIISNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMP-DH 112
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSII+ GDSDIIKSMP DH
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIEPGDSDIIKSMPGDH 112

BLAST of Spo13061.1 vs. NCBI nr
Match: gi|697155155|ref|XP_009631814.1| (PREDICTED: 60S ribosomal protein L30-like [Nicotiana tomentosiformis])

HSP 1 Score: 209.9 bits (533), Expect = 2.200e-51
Identity = 101/110 (91.82%), Postives = 106/110 (96.36%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           M  +KKTKKTHESINNRLALVMKSGK+TLGYKTVLKTLR+SK KLIII+NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMPD 111
           EYYAMLAKVGVHHYNGNNVDLGTACGKY+RVCCLSIID GDSDIIKSMPD
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKSMPD 110

BLAST of Spo13061.1 vs. NCBI nr
Match: gi|702279726|ref|XP_010045139.1| (PREDICTED: 60S ribosomal protein L30 [Eucalyptus grandis])

HSP 1 Score: 209.5 bits (532), Expect = 2.900e-51
Identity = 102/113 (90.27%), Postives = 107/113 (94.69%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           M  +KKTKKTHESINNRLALVMKSGK+TLGYKTVLKTLR+SK KL+II+NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLVIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMP--DH 112
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID GDSDIIKSMP  DH
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKSMPGGDH 113

BLAST of Spo13061.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R367_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_117400 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 7.300e-57
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI
Sbjct: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMPDH 112
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMPDH
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMPDH 111

BLAST of Spo13061.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9J9_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_091420 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 7.300e-57
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI
Sbjct: 14  MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 73

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMPDH 112
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMPDH
Sbjct: 74  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMPDH 124

BLAST of Spo13061.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BU14_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g171800 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.100e-52
Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           M  SKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLR+SKAKLIIISNNCPPLRKSEI
Sbjct: 1   MVSSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRTSKAKLIIISNNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMP-DH 112
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSII+ GDSDIIKSMP DH
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIEPGDSDIIKSMPGDH 112

BLAST of Spo13061.1 vs. UniProtKB/TrEMBL
Match: A0A059D9M8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03786 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.000e-51
Identity = 102/113 (90.27%), Postives = 107/113 (94.69%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           M  +KKTKKTHESINNRLALVMKSGK+TLGYKTVLKTLR+SK KL+II+NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLVIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMP--DH 112
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID GDSDIIKSMP  DH
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKSMPGGDH 113

BLAST of Spo13061.1 vs. UniProtKB/TrEMBL
Match: K4DAK6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.700e-51
Identity = 101/109 (92.66%), Postives = 105/109 (96.33%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           M  +KKTKKTHESINNRLALVMKSGK+TLGYKTVLKTLR+SK KLIII+NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMP 110
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIID GDSDIIKSMP
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKSMP 109

BLAST of Spo13061.1 vs. ExPASy Swiss-Prot
Match: RL30_LUPLU (60S ribosomal protein L30 OS=Lupinus luteus GN=RPL30 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.000e-52
Identity = 98/109 (89.91%), Postives = 105/109 (96.33%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           M  +KKTKKTHESINNRLALVMKSGK+TLGYKTVLK+LRSSK KLIII+NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMP 110
           EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSI+D GDSDIIK++P
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKTLP 109

BLAST of Spo13061.1 vs. ExPASy Swiss-Prot
Match: RL30_EUPES (60S ribosomal protein L30 OS=Euphorbia esula GN=RPL30 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 3.500e-52
Identity = 100/112 (89.29%), Postives = 108/112 (96.43%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           M  +KKTKKTHESIN+RLALVMKSGKFTLGYKTVL++LRS+K KLIII+NNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMP-DH 112
           EYYAMLAKVGVHHYNGNNVDLGTACGKY+RVCCLSIIDAGDSDIIKS+P DH
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDAGDSDIIKSIPGDH 112

BLAST of Spo13061.1 vs. ExPASy Swiss-Prot
Match: RL302_ARATH (60S ribosomal protein L30-2 OS=Arabidopsis thaliana GN=RPL30B PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.500e-47
Identity = 90/109 (82.57%), Postives = 100/109 (91.74%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           M   KKTKK+HE IN+RLALVMKSGK+TLGYK+VLK+LR SK KLI+IS NCPPLR+SEI
Sbjct: 1   MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMP 110
           EYYAMLAKVGVHHYNGNNVDLGTACGKY+RV CLSI+D GDSDIIKS+P
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIP 109

BLAST of Spo13061.1 vs. ExPASy Swiss-Prot
Match: RL301_ARATH (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana GN=RPL30A PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.000e-47
Identity = 90/109 (82.57%), Postives = 102/109 (93.58%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           M  +KKTKK+HE IN+RLALVMKSGK+TLGYK+VLK+LRSSK KLI+IS+NCPPLR+SEI
Sbjct: 1   MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMP 110
           EYYAMLAKVGVHHYN NNVDLGTACGKY+RV CLSI+D GDSDIIKS+P
Sbjct: 61  EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLP 109

BLAST of Spo13061.1 vs. ExPASy Swiss-Prot
Match: RL303_ARATH (60S ribosomal protein L30-3 OS=Arabidopsis thaliana GN=RPL30C PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.200e-46
Identity = 88/109 (80.73%), Postives = 100/109 (91.74%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           M   KK KK+HE IN+RLALVMKSGK+TLGYK+VLK+LRSSK KLI+IS+NCPPLR+SEI
Sbjct: 1   MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMP 110
           EYYAMLAKVGVH YNGNNVDLGTACGKY+RV CLSI+D GDSDIIK++P
Sbjct: 61  EYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLP 109

BLAST of Spo13061.1 vs. TAIR (Arabidopsis)
Match: AT1G77940.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 189.9 bits (481), Expect = 8.500e-49
Identity = 90/109 (82.57%), Postives = 100/109 (91.74%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           M   KKTKK+HE IN+RLALVMKSGK+TLGYK+VLK+LR SK KLI+IS NCPPLR+SEI
Sbjct: 1   MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMP 110
           EYYAMLAKVGVHHYNGNNVDLGTACGKY+RV CLSI+D GDSDIIKS+P
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIP 109

BLAST of Spo13061.1 vs. TAIR (Arabidopsis)
Match: AT1G36240.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 189.5 bits (480), Expect = 1.100e-48
Identity = 90/109 (82.57%), Postives = 102/109 (93.58%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           M  +KKTKK+HE IN+RLALVMKSGK+TLGYK+VLK+LRSSK KLI+IS+NCPPLR+SEI
Sbjct: 1   MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMP 110
           EYYAMLAKVGVHHYN NNVDLGTACGKY+RV CLSI+D GDSDIIKS+P
Sbjct: 61  EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLP 109

BLAST of Spo13061.1 vs. TAIR (Arabidopsis)
Match: AT3G18740.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 186.0 bits (471), Expect = 1.200e-47
Identity = 88/109 (80.73%), Postives = 100/109 (91.74%), Query Frame = 1

		  

Query: 1   MAPSKKTKKTHESINNRLALVMKSGKFTLGYKTVLKTLRSSKAKLIIISNNCPPLRKSEI 60
           M   KK KK+HE IN+RLALVMKSGK+TLGYK+VLK+LRSSK KLI+IS+NCPPLR+SEI
Sbjct: 1   MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDAGDSDIIKSMP 110
           EYYAMLAKVGVH YNGNNVDLGTACGKY+RV CLSI+D GDSDIIK++P
Sbjct: 61  EYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLP 109

The following BLAST results are available for this feature:
BLAST of Spo13061.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902209349|gb|KNA16188.1|1.0e-56100.hypothetical protein SOVF_0914... [more]
gi|902197326|gb|KNA13384.1|1.0e-56100.hypothetical protein SOVF_1174... [more]
gi|731348503|ref|XP_010685518.1|1.6e-5294.6PREDICTED: 60S ribosomal prote... [more]
gi|697155155|ref|XP_009631814.1|2.2e-5191.8PREDICTED: 60S ribosomal prote... [more]
gi|702279726|ref|XP_010045139.1|2.9e-5190.2PREDICTED: 60S ribosomal prote... [more]
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BLAST of Spo13061.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R367_SPIOL7.3e-57100.Uncharacterized protein OS=Spi... [more]
A0A0K9R9J9_SPIOL7.3e-57100.Uncharacterized protein (Fragm... [more]
A0A0J8BU14_BETVU1.1e-5294.6Uncharacterized protein OS=Bet... [more]
A0A059D9M8_EUCGR2.0e-5190.2Uncharacterized protein OS=Euc... [more]
K4DAK6_SOLLC2.7e-5192.6Uncharacterized protein OS=Sol... [more]
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BLAST of Spo13061.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RL30_LUPLU2.0e-5289.960S ribosomal protein L30 OS=L... [more]
RL30_EUPES3.5e-5289.260S ribosomal protein L30 OS=E... [more]
RL302_ARATH1.5e-4782.560S ribosomal protein L30-2 OS... [more]
RL301_ARATH2.0e-4782.5Putative 60S ribosomal protein... [more]
RL303_ARATH2.2e-4680.760S ribosomal protein L30-3 OS... [more]
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BLAST of Spo13061.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G77940.18.5e-4982.5Ribosomal protein L7Ae/L30e/S1... [more]
AT1G36240.11.1e-4882.5Ribosomal protein L7Ae/L30e/S1... [more]
AT3G18740.11.2e-4780.7Ribosomal protein L7Ae/L30e/S1... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000231Ribosomal protein L30ePANTHERPTHR11449RIBOSOMAL PROTEIN L30coord: 2..110
score: 1.6
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 13..105
score: 1.4
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00709RIBOSOMAL_L30E_1coord: 24..48
scor
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00993RIBOSOMAL_L30E_2coord: 80..100
scor

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome