Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGATCAGACCGCCGCTAAGCCTGCCGGAGTTTGGCCCACCGTTAAACCCTTCGTTAATGGCGGTGCCTCCGGTATGCTCGCTACCTGTGTCATTCAACCCATCGATATGATAAAGGTCTCATTTTTTCTCTACTTTGATTTTTGGGATTTTGTTTTAAGATGAAATTATTTGATCCGGGGTTGTATTTGATGTTTTTGGTTGATTTTATGAATTGGGTATTATTTTTTAGCTGAAATCCTGTGTTTTGCGGTTGTATTTGACGTTTTTGGTTGATTTTATGAAATGGGTAGGTGAGAATTCAATTGGGTCAGGGATCAGCTGTTCAGGTGACCAAGAACATGCTTGCAAACGAGGGTATTGGTACCTTCTACAAGGTTTGTTTCGTGCTTTCTTCTTTCTTTCTGCCAATTTCTTGTTTGCTGTTCTTTACAAATCTGAATCTGGGTAGATCTGCTATCTAATATGTGCGCAAAAGTTCGAACTGATGTTTGATTTGTCATTTTTCTGCACTGCATTGTTGCTTTGTCGATCTCATTTCTCTTTTGAAGCCGAGAAAGCTTGGCTTGCTGGTGATATGATCGAAAACGGATTAATCGTAGAAATAGACATGTTAAAGTGATTTGTAATGTTGAATATGATTTGATTAGGTGCTTTTCTGCACTGCATTGCTGGTTGTTGGGTTCATTTCCTTTTCAAAGCTGAAGAAGCCTGGTTAGCAGGCGTTACAATGGAAATCGACTAATCATAGAAACGGATATGTTATACATGACGATTGTTAGCTTGTTGAGTGATTTGCAATGTTGGATATGGTTTCCTGCACTGAATTGTTGGTTTGTTGATCTCTTTTCACTTTTGAAGCTTAGGAATCTTGGTTTAATGATGTTATAATAGGAAATGGGGTAATCATAGAAATTGGCATGTTACATATGATGATTGTTAGCATGTTGAGTGAATTGCAGTTTTGGATGTGGTTAGTTTAGGTCTTTTTTTCCACTACATCGTTGGTTTGTTGGTCGCTTTTAATGCTTAAGAGAGCTTGATTCTCCGGCACTGTAATTGGACATAGTTTAATCATGGAATTATACATGTTATCATATGATGATTGCTACTTTGTTGAGGCATTTGCAATGTTGGATGTGATAACTTGGGGATTTTATTTGGAATAATTCGTTCAGCTATTGTAATTTTTGGCGTTTCTGTGTCATCTATCTCATATGGACTCTTTTTTTGGTGCAGGGTTTGTCTGCTGGGTTGCTTAGGCAAGCCACATATACAACAGCAAGACTTGGGTCTTTCAAGTAAGAATGATTTCTGGTTGACGTGTAGTCAATTCTGTCATCAGTTGGCTTTCTTCTTTTTTTACAATCCTATTTTTGTTCATAAGAACCATGTGTTATTGCATGTATCTCCTCTGATCAGCCACACTTCCTTGATTTTATCATCTTTTTTATGGTGATTTGGTTGATAGTGCTTAGTGCATGTGTGTCAAAATCTATTTTACGATCTTTATTCTTGAAAAAGAGTTGGTGTTGCATTTTCATGTACTGATTGATACAGTGCATGATGCGAAGATAGTATGCTCTTTAAGAGCAACTTATTGAGTGTGTTATACATCAAGTTAGTTATGATTTGAAGAAATGCTGTTCCATCTACTAAATACGAAGTAATTTCTAATTATTAGTTTTCTACTGTCTTCAGGATATTGACGAACAAAGCTATAGCTGCCAATGATGGGAAGCCTTTGCCTTTGTACCAAAAGGCTCTTTGTGGATTAACTGCTGGTGCTATTGGAGCATCTGTTGGTAGTCCTGCTGATCTTGCACTCATTCGTATGCAAGCTGATGCTACTTTGCCAGCTGCTCAACGAAGACACTACAAGAATGCATTCCATGCTCTTTACAGAATTGTTTCTGACGAGGGAGTTTTGTCACTCTGGAAAGGTGCAGGTCCAACAGTTGTAAGAGCTATGGCATTGAACATGGGTATGCTTGCCTCTTATGATCAATCTGTGGAGTTCTTCAGGGATAACGTCGGCCTTGGTGAAGGTGCTACTATTGTAGGTAAGAATGTACGGTTATTAGCATATTTACATGCTCAACTGATTGCTTTCTTTACCTGTTTATCGATAAGATGCTTATAGAGTTGAGGTTTAAGATCCGACTTCTCTATCTCGTTGCTGGAATCTTATATATTAACGACTAGCTCTAAATCTGGCCTATGATTTTGTGGTTACTTTGTTAAGATGTTATTTAAGAGCCTTCAGACCAAGAATACTTTGTATAATATCTTTCATACACTCCCTTCAATTTAATGAGTCTCATTTCCAGGTTCATCATATCTGTTAGCTCTGTAATTATGAGTTATCTATATAATTCTAAAATGTCCTTTTTTACATTATCTTTTGGCTAAATGTCAATTTCATTTATTTAGGTGTAGTGAATTCTCAATATTGTGGATTTGTTCTTGACATGATTACACTGTCACCGTTATGTTGCTGAACAATATAGTAGAGAAGTTAAAATCTCATCATTCATTCAATCCCTTTTCTTCTACTCTTACTCTGTGTCATGTTTCATGCTCTACAATGAGACATTGATGTACTGAGAAAGTTTATTGCTAAATTTGATTTTGGTTTGGAATGGAAGAAGTATTATATGGTAAAAAGTATTTCTTGTCAACTTTTAAAATAACACTTTTTGCTTACTGATAGGGAACTGCATTTGTCTTCTTTTGTGCGCTATATACTGGTGTCAAACAAATATTTATTATACTTTGTACGAAGTATATATTTGTGAGATAAGGTTCTTCCTACCATGCAGTTTTGCTAGGGAAACTTCCCCTGTGTTTCTATAGGCCAGTGGGCCCAAGTTATAACTTTTGTTTTCTTTCTATAACATGAATGCGGTGATTGATATCCCTGCTATATAGCTAATTGTGTTCTTTTTGTCATCCATATCTTGATTGTATTCTTTACCAACCAAATACATGCAGTTCAGTTTACGTTGAAATACTCAATTCCAGCCATCGTGTTATGATTGTATATATCATCTCTCATGAAATAAACCTCCTATAGAAACTTAAACAGCATTATGTACTACTCAGAACATATCAATTAGTAAATTTATGGGACTTAGGTACACATTCTTCAAACTCCTCTGCCTAAAAGACAAACAAAACTTCTCAGCTATTGAAGTGCCTTTGAGTACTTTGTCAGTTTGAGTTGGTGGTGCAAAATTTCTAAGCATGAACCTTCATATTATCATACGGACCTTTTTTTACTTGGTGTGAATCTGAACCATATTTTCCCCTGCCACACAGGTGCTAGTGCTGTTTCTGGATTCTTCGCTGCTGCTTGCAGTCTACCATTTGATTATGTGAAAACACAAATACAGAAAATGCAGCCTGATGCTACTGGGAAGTATCCATATACTGGTTCGTTGGACTGTACAATGAAAACATTGAAAGCTGGTGGCCCCTTGAAATTCTACACTGGATTTCCTGTCTACTGTGTTAGAATTGCCCCACACGTCATGGTATACTCCCTTCCTCTCTTCTCTATTTGTTTCGCTGTATATTGGATTGTATGCTTGCAAGTATTTTTTTTGGTAGTTTATGCTTGCGTTCCCACCCCCACTTTTCTGATTATATTTTCACACCCATCTGAGAATCACGGATAGTAGAGATGGTCTTACCACCTCTACCTTCCAATCCTGTGATGATCATGTCCATTATATTCCGGGTAGGCTATTTTTCTGCTCATTACCTTTGCTCATTTGAAAATGAGTAAAAAACGGTGTCTTGGGCACACCGAAGAATATTAGTAGCGATTTTGAATTTTTCTTGCTTGTGTCAAAACCCAATTTTGTAACCTTCATTTTTCCCCTCCAAAGTAGCCTTTCTGTTCATTTCCTGAAGCACGTAAACTAACTCTTTGAGTGTGATCTACTTTCAGATGACATGGATTTTCCTGAACCAAATTAACAAGTTTGAGAAGAAAATTGGATTGTAGATCAGAGACAAGGTGTGATGCAGCTCTAATAGTGAACCTTAATATTCACAACTCTGATTGCTGGTTTCAGGGCTCAGCAAGCAAAGAATGTTGTTTTATCTTTTTATGGAATTAAAGCTTTAAAATTTTGCTGGAACTGTAATAAATTAGCAAAAACAATCGTATTAGAATTACATGATTCTTTTGGGATAGGTTGAAGCCATCCTTAGCCATAGCTGAATTAGTTATGTCGTCTTTTGGATGATATGTTAGAGTTGAGACTATTATTAATACATTGCGGAAGTTGTAAGCTCAGCCATAACGTGGTTGATTTCTTTGTCATTTTACATGTTATTATTCTCAAGGGAAGCTTGGAATGTTAGATATCAGCTGGAATTTATATGCTTTTTGTGAAGCCAAGTGCAATCTATATGCACTCGCAAGTTAATTGGCTTTGTCAAGCCGAGTCAGTGCAGTCCATTTCCTCAGTTCCTTTTAGAGTTTTGGGTGTCTTTTATTCCTCTATATTTTTATTTTTATTTATTTTCAAGAGCTTCTTTCAGTTGTGTTAAACCACATTTGTAAACCAAAAGGGGTATAGACATAGTACATAAACTGGGGGAAGAACCCAGAAGTCCACAACAGAGTCAGAAACAACAAATCGTGAGCTACACTTTCTTACTTTCATAACCAAAACA ATGGCAGATCAGACCGCCGCTAAGCCTGCCGGAGTTTGGCCCACCGTTAAACCCTTCGTTAATGGCGGTGCCTCCGGTATGCTCGCTACCTGTGTCATTCAACCCATCGATATGATAAAGGTGAGAATTCAATTGGGTCAGGGATCAGCTGTTCAGGTGACCAAGAACATGCTTGCAAACGAGGGTATTGGTACCTTCTACAAGGGTTTGTCTGCTGGGTTGCTTAGGCAAGCCACATATACAACAGCAAGACTTGGGTCTTTCAAGATATTGACGAACAAAGCTATAGCTGCCAATGATGGGAAGCCTTTGCCTTTGTACCAAAAGGCTCTTTGTGGATTAACTGCTGGTGCTATTGGAGCATCTGTTGGTAGTCCTGCTGATCTTGCACTCATTCGTATGCAAGCTGATGCTACTTTGCCAGCTGCTCAACGAAGACACTACAAGAATGCATTCCATGCTCTTTACAGAATTGTTTCTGACGAGGGAGTTTTGTCACTCTGGAAAGGTGCAGGTCCAACAGTTGTAAGAGCTATGGCATTGAACATGGGTATGCTTGCCTCTTATGATCAATCTGTGGAGTTCTTCAGGGATAACGTCGGCCTTGGTGAAGGTGCTACTATTGTAGGTGCTAGTGCTGTTTCTGGATTCTTCGCTGCTGCTTGCAGTCTACCATTTGATTATGTGAAAACACAAATACAGAAAATGCAGCCTGATGCTACTGGGAAGTATCCATATACTGGTTCGTTGGACTGTACAATGAAAACATTGAAAGCTGGTGGCCCCTTGAAATTCTACACTGGATTTCCTGTCTACTGTGTTAGAATTGCCCCACACGTCATGATGACATGGATTTTCCTGAACCAAATTAACAAGTTTGAGAAGAAAATTGGATTGTAGATCAGAGACAAGGTGTGATGCAGCTCTAATAGTGAACCTTAATATTCACAACTCTGATTGCTGGTTTCAGGGCTCAGCAAGCAAAGAATGTTGTTTTATCTTTTTATGGAATTAAAGCTTTAAAATTTTGCTGGAACTGTAATAAATTAGCAAAAACAATCGTATTAGAATTACATGATTCTTTTGGGATAGGTTGAAGCCATCCTTAGCCATAGCTGAATTAGTTATGTCGTCTTTTGGATGATATGTTAGAGTTGAGACTATTATTAATACATTGCGGAAGTTGTAAGCTCAGCCATAACGTGGTTGATTTCTTTGTCATTTTACATGTTATTATTCTCAAGGGAAGCTTGGAATGTTAGATATCAGCTGGAATTTATATGCTTTTTGTGAAGCCAAGTGCAATCTATATGCACTCGCAAGTTAATTGGCTTTGTCAAGCCGAGTCAGTGCAGTCCATTTCCTCAGTTCCTTTTAGAGTTTTGGGTGTCTTTTATTCCTCTATATTTTTATTTTTATTTATTTTCAAGAGCTTCTTTCAGTTGTGTTAAACCACATTTGTAAACCAAAAGGGGTATAGACATAGTACATAAACTGGGGGAAGAACCCAGAAGTCCACAACAGAGTCAGAAACAACAAATCGTGAGCTACACTTTCTTACTTTCATAACCAAAACA ATGGCAGATCAGACCGCCGCTAAGCCTGCCGGAGTTTGGCCCACCGTTAAACCCTTCGTTAATGGCGGTGCCTCCGGTATGCTCGCTACCTGTGTCATTCAACCCATCGATATGATAAAGGTGAGAATTCAATTGGGTCAGGGATCAGCTGTTCAGGTGACCAAGAACATGCTTGCAAACGAGGGTATTGGTACCTTCTACAAGGGTTTGTCTGCTGGGTTGCTTAGGCAAGCCACATATACAACAGCAAGACTTGGGTCTTTCAAGATATTGACGAACAAAGCTATAGCTGCCAATGATGGGAAGCCTTTGCCTTTGTACCAAAAGGCTCTTTGTGGATTAACTGCTGGTGCTATTGGAGCATCTGTTGGTAGTCCTGCTGATCTTGCACTCATTCGTATGCAAGCTGATGCTACTTTGCCAGCTGCTCAACGAAGACACTACAAGAATGCATTCCATGCTCTTTACAGAATTGTTTCTGACGAGGGAGTTTTGTCACTCTGGAAAGGTGCAGGTCCAACAGTTGTAAGAGCTATGGCATTGAACATGGGTATGCTTGCCTCTTATGATCAATCTGTGGAGTTCTTCAGGGATAACGTCGGCCTTGGTGAAGGTGCTACTATTGTAGGTGCTAGTGCTGTTTCTGGATTCTTCGCTGCTGCTTGCAGTCTACCATTTGATTATGTGAAAACACAAATACAGAAAATGCAGCCTGATGCTACTGGGAAGTATCCATATACTGGTTCGTTGGACTGTACAATGAAAACATTGAAAGCTGGTGGCCCCTTGAAATTCTACACTGGATTTCCTGTCTACTGTGTTAGAATTGCCCCACACGTCATGATGACATGGATTTTCCTGAACCAAATTAACAAGTTTGAGAAGAAAATTGGATTGTAG MADQTAAKPAGVWPTVKPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAVQVTKNMLANEGIGTFYKGLSAGLLRQATYTTARLGSFKILTNKAIAANDGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRHYKNAFHALYRIVSDEGVLSLWKGAGPTVVRAMALNMGMLASYDQSVEFFRDNVGLGEGATIVGASAVSGFFAAACSLPFDYVKTQIQKMQPDATGKYPYTGSLDCTMKTLKAGGPLKFYTGFPVYCVRIAPHVMMTWIFLNQINKFEKKIGL Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo13197.1 vs. NCBI nr
Match: gi|902204034|gb|KNA14762.1| (hypothetical protein SOVF_104770 [Spinacia oleracea]) HSP 1 Score: 599.0 bits (1543), Expect = 4.600e-168 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 1
BLAST of Spo13197.1 vs. NCBI nr
Match: gi|731364147|ref|XP_010693816.1| (PREDICTED: mitochondrial dicarboxylate/tricarboxylate transporter DTC-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 555.4 bits (1430), Expect = 5.900e-155 Identity = 272/299 (90.97%), Postives = 285/299 (95.32%), Query Frame = 1
BLAST of Spo13197.1 vs. NCBI nr
Match: gi|702278692|ref|XP_010044939.1| (PREDICTED: mitochondrial dicarboxylate/tricarboxylate transporter DTC [Eucalyptus grandis]) HSP 1 Score: 547.0 bits (1408), Expect = 2.100e-152 Identity = 268/299 (89.63%), Postives = 280/299 (93.65%), Query Frame = 1
BLAST of Spo13197.1 vs. NCBI nr
Match: gi|703160837|ref|XP_010112635.1| (hypothetical protein L484_019087 [Morus notabilis]) HSP 1 Score: 543.5 bits (1399), Expect = 2.300e-151 Identity = 267/299 (89.30%), Postives = 279/299 (93.31%), Query Frame = 1
BLAST of Spo13197.1 vs. NCBI nr
Match: gi|802563789|ref|XP_012067077.1| (PREDICTED: mitochondrial dicarboxylate/tricarboxylate transporter DTC [Jatropha curcas]) HSP 1 Score: 543.1 bits (1398), Expect = 3.000e-151 Identity = 265/299 (88.63%), Postives = 279/299 (93.31%), Query Frame = 1
BLAST of Spo13197.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R7M3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_104770 PE=3 SV=1) HSP 1 Score: 599.0 bits (1543), Expect = 3.200e-168 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 1
BLAST of Spo13197.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BFH8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g068440 PE=3 SV=1) HSP 1 Score: 555.4 bits (1430), Expect = 4.100e-155 Identity = 272/299 (90.97%), Postives = 285/299 (95.32%), Query Frame = 1
BLAST of Spo13197.1 vs. UniProtKB/TrEMBL
Match: A0A059D9A4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03603 PE=3 SV=1) HSP 1 Score: 547.0 bits (1408), Expect = 1.500e-152 Identity = 268/299 (89.63%), Postives = 280/299 (93.65%), Query Frame = 1
BLAST of Spo13197.1 vs. UniProtKB/TrEMBL
Match: W9SZF7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019087 PE=3 SV=1) HSP 1 Score: 543.5 bits (1399), Expect = 1.600e-151 Identity = 267/299 (89.30%), Postives = 279/299 (93.31%), Query Frame = 1
BLAST of Spo13197.1 vs. UniProtKB/TrEMBL
Match: A0A067LC67_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01873 PE=3 SV=1) HSP 1 Score: 543.1 bits (1398), Expect = 2.100e-151 Identity = 265/299 (88.63%), Postives = 279/299 (93.31%), Query Frame = 1
BLAST of Spo13197.1 vs. ExPASy Swiss-Prot
Match: DTC_ARATH (Mitochondrial dicarboxylate/tricarboxylate transporter DTC OS=Arabidopsis thaliana GN=DTC PE=1 SV=1) HSP 1 Score: 510.8 bits (1314), Expect = 1.000e-143 Identity = 253/299 (84.62%), Postives = 270/299 (90.30%), Query Frame = 1
BLAST of Spo13197.1 vs. ExPASy Swiss-Prot
Match: M2OM_NEUCR (Putative mitochondrial 2-oxoglutarate/malate carrier protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mic-33 PE=3 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 8.700e-66 Identity = 138/288 (47.92%), Postives = 181/288 (62.85%), Query Frame = 1
BLAST of Spo13197.1 vs. ExPASy Swiss-Prot
Match: M2OM_DICDI (Probable mitochondrial 2-oxoglutarate/malate carrier protein OS=Dictyostelium discoideum GN=ucpC PE=3 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 1.700e-61 Identity = 130/295 (44.07%), Postives = 179/295 (60.68%), Query Frame = 1
BLAST of Spo13197.1 vs. ExPASy Swiss-Prot
Match: M2OM_MOUSE (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Mus musculus GN=Slc25a11 PE=1 SV=3) HSP 1 Score: 229.6 bits (584), Expect = 4.600e-59 Identity = 134/295 (45.42%), Postives = 179/295 (60.68%), Query Frame = 1
BLAST of Spo13197.1 vs. ExPASy Swiss-Prot
Match: M2OM_BOVIN (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus GN=SLC25A11 PE=1 SV=3) HSP 1 Score: 229.2 bits (583), Expect = 6.000e-59 Identity = 133/295 (45.08%), Postives = 180/295 (61.02%), Query Frame = 1
BLAST of Spo13197.1 vs. TAIR (Arabidopsis)
Match: AT5G19760.1 (Mitochondrial substrate carrier family protein) HSP 1 Score: 510.8 bits (1314), Expect = 5.800e-145 Identity = 253/299 (84.62%), Postives = 270/299 (90.30%), Query Frame = 1
BLAST of Spo13197.1 vs. TAIR (Arabidopsis)
Match: AT4G24570.1 (dicarboxylate carrier 2) HSP 1 Score: 176.8 bits (447), Expect = 2.000e-44 Identity = 100/238 (42.02%), Postives = 141/238 (59.24%), Query Frame = 1
BLAST of Spo13197.1 vs. TAIR (Arabidopsis)
Match: AT2G22500.1 (uncoupling protein 5) HSP 1 Score: 174.1 bits (440), Expect = 1.300e-43 Identity = 96/246 (39.02%), Postives = 144/246 (58.54%), Query Frame = 1
BLAST of Spo13197.1 vs. TAIR (Arabidopsis)
Match: AT5G09470.1 (dicarboxylate carrier 3) HSP 1 Score: 149.4 bits (376), Expect = 3.400e-36 Identity = 93/250 (37.20%), Postives = 129/250 (51.60%), Query Frame = 1
BLAST of Spo13197.1 vs. TAIR (Arabidopsis)
Match: AT5G58970.1 (uncoupling protein 2) HSP 1 Score: 147.5 bits (371), Expect = 1.300e-35 Identity = 98/296 (33.11%), Postives = 143/296 (48.31%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo13197.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo13197.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo13197.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo13197.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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