Spo13312.1 (mRNA) | SpinachBase

Overview


Name	Spo13312.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	DNA-binding protein
Location	chr4 : 16487538 .. 16488422 (-)
Sequence length	885

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCAGAACCCCCCACAACAACCCCAACCATCTCTCTCCACCGTCAGCGCCTCCGGGAAACGCTGCTTCACCTGCAATTCCGACGACCACTGGGTTCTCCATAACGTCAAATCCCGAGACAACGAATGCCGAAAGTACTGCACTTCCTGCGTTTTAAATCTCTATCGGACGTCGTTTTGCCCAACTTGCTTCAACCTCCATGACCCCAATTCCCTCCTCCCTCCTCCTATCGCGTCTTCTTCCTCCTCCATCAACAATCGCAACCTCACGTGCCTGAAATGCAGCTCAATCTCCCACAGCACGTGCGTCCCCCCCAAGATCCCCAAATCCCCTTACCTTTGCACTACTTGCTCAAACCCCTCTCTGAAATTCTTCGATTTAAAGAAACCCAGAAAATTCCGTGATCAACCGCCGTCCAACGGTGGCTGCGGTAGCGGAAGCAGCAGCGGAGGCGGAGAAGAGCCGCAGCAGAGGCAGGTTATTGATGAGAGGGCGGCGAAGGTGTTCTTATTGGCGGCGAAGATATCAGCGATTACGATGAATAAGGCGGTGGCCCTGGCCAGAACCGAAGCTGAACGGAAAATTGAAGGGGCCGCATTGGCGAGGAAAAGGGCTAAAGAAGCAATTGATCATTTTGTCTTCTTATCTTCGAAGATGGTACATTCCAAACAACAGAGGAGGGATGTTGTTCTTGGGTCGGGTCCGAGTTTGAGTCCGAGGAATGTTGCTCTTGGGTCGGGTCCGAGGCCGTATTCTGAAGCTACCAAATCGGATAACAATGGCGTTGGCCGTGTCGGGATTGGGAATGGAAATCGATCGTTGGCCGCGGTGCCGGTGGTGCAGAGTAATGGTGGGACTAATGGGAAGGAGAATGCAGTGTAG

mRNA sequence

ATGTCCCAGAACCCCCCACAACAACCCCAACCATCTCTCTCCACCGTCAGCGCCTCCGGGAAACGCTGCTTCACCTGCAATTCCGACGACCACTGGGTTCTCCATAACGTCAAATCCCGAGACAACGAATGCCGAAAGTACTGCACTTCCTGCGTTTTAAATCTCTATCGGACGTCGTTTTGCCCAACTTGCTTCAACCTCCATGACCCCAATTCCCTCCTCCCTCCTCCTATCGCGTCTTCTTCCTCCTCCATCAACAATCGCAACCTCACGTGCCTGAAATGCAGCTCAATCTCCCACAGCACGTGCGTCCCCCCCAAGATCCCCAAATCCCCTTACCTTTGCACTACTTGCTCAAACCCCTCTCTGAAATTCTTCGATTTAAAGAAACCCAGAAAATTCCGTGATCAACCGCCGTCCAACGGTGGCTGCGGTAGCGGAAGCAGCAGCGGAGGCGGAGAAGAGCCGCAGCAGAGGCAGGTTATTGATGAGAGGGCGGCGAAGGTGTTCTTATTGGCGGCGAAGATATCAGCGATTACGATGAATAAGGCGGTGGCCCTGGCCAGAACCGAAGCTGAACGGAAAATTGAAGGGGCCGCATTGGCGAGGAAAAGGGCTAAAGAAGCAATTGATCATTTTGTCTTCTTATCTTCGAAGATGGTACATTCCAAACAACAGAGGAGGGATGTTGTTCTTGGGTCGGGTCCGAGTTTGAGTCCGAGGAATGTTGCTCTTGGGTCGGGTCCGAGGCCGTATTCTGAAGCTACCAAATCGGATAACAATGGCGTTGGCCGTGTCGGGATTGGGAATGGAAATCGATCGTTGGCCGCGGTGCCGGTGGTGCAGAGTAATGGTGGGACTAATGGGAAGGAGAATGCAGTGTAG

Coding sequence (CDS)

ATGTCCCAGAACCCCCCACAACAACCCCAACCATCTCTCTCCACCGTCAGCGCCTCCGGGAAACGCTGCTTCACCTGCAATTCCGACGACCACTGGGTTCTCCATAACGTCAAATCCCGAGACAACGAATGCCGAAAGTACTGCACTTCCTGCGTTTTAAATCTCTATCGGACGTCGTTTTGCCCAACTTGCTTCAACCTCCATGACCCCAATTCCCTCCTCCCTCCTCCTATCGCGTCTTCTTCCTCCTCCATCAACAATCGCAACCTCACGTGCCTGAAATGCAGCTCAATCTCCCACAGCACGTGCGTCCCCCCCAAGATCCCCAAATCCCCTTACCTTTGCACTACTTGCTCAAACCCCTCTCTGAAATTCTTCGATTTAAAGAAACCCAGAAAATTCCGTGATCAACCGCCGTCCAACGGTGGCTGCGGTAGCGGAAGCAGCAGCGGAGGCGGAGAAGAGCCGCAGCAGAGGCAGGTTATTGATGAGAGGGCGGCGAAGGTGTTCTTATTGGCGGCGAAGATATCAGCGATTACGATGAATAAGGCGGTGGCCCTGGCCAGAACCGAAGCTGAACGGAAAATTGAAGGGGCCGCATTGGCGAGGAAAAGGGCTAAAGAAGCAATTGATCATTTTGTCTTCTTATCTTCGAAGATGGTACATTCCAAACAACAGAGGAGGGATGTTGTTCTTGGGTCGGGTCCGAGTTTGAGTCCGAGGAATGTTGCTCTTGGGTCGGGTCCGAGGCCGTATTCTGAAGCTACCAAATCGGATAACAATGGCGTTGGCCGTGTCGGGATTGGGAATGGAAATCGATCGTTGGCCGCGGTGCCGGTGGTGCAGAGTAATGGTGGGACTAATGGGAAGGAGAATGCAGTGTAG

Protein sequence

MSQNPPQQPQPSLSTVSASGKRCFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSFCPTCFNLHDPNSLLPPPIASSSSSINNRNLTCLKCSSISHSTCVPPKIPKSPYLCTTCSNPSLKFFDLKKPRKFRDQPPSNGGCGSGSSSGGGEEPQQRQVIDERAAKVFLLAAKISAITMNKAVALARTEAERKIEGAALARKRAKEAIDHFVFLSSKMVHSKQQRRDVVLGSGPSLSPRNVALGSGPRPYSEATKSDNNGVGRVGIGNGNRSLAAVPVVQSNGGTNGKENAV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo13312	Spo13312	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo13312.1	Spo13312.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13312.1.CDS.1	Spo13312.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13312.1.exon.1	Spo13312.1.exon.1	exon

Homology

[Close]

BLAST of Spo13312.1 vs. NCBI nr
Match: gi|902035806|gb|KNA02628.1| (hypothetical protein SOVF_216930 [Spinacia oleracea])

HSP 1 Score: 577.4 bits (1487), Expect = 1.400e-161
Identity = 294/296 (99.32%), Postives = 294/296 (99.32%), Query Frame = 1


		  
Query: 1   MSQNPPQQPQPSLSTVSASGKRCFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSF 60
           MSQNPPQQPQPSLSTVSASGKRCFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSF
Sbjct: 1   MSQNPPQQPQPSLSTVSASGKRCFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSF 60

Query: 61  CPTCFNLHDPNSLLPPPIASSSSSINNRNLTCLKCSSISHSTCVPPKIPKSPYLCTTCSN 120
           CPTCFNLHDPNSLLPPPIASSSSSINNRNLTCLKCSSISHSTCVPPKIPKSPYLCTTCSN
Sbjct: 61  CPTCFNLHDPNSLLPPPIASSSSSINNRNLTCLKCSSISHSTCVPPKIPKSPYLCTTCSN 120

Query: 121 PSLKFFDLKKPRKFRDQPPSNGGCGSGSSSGGGEE--PQQRQVIDERAAKVFLLAAKISA 180
           PSLKFFDLKKPRKFRDQPPSNGGCGSGSSSGGGEE  PQQRQVIDERAAKVFLLAAKISA
Sbjct: 121 PSLKFFDLKKPRKFRDQPPSNGGCGSGSSSGGGEEPQPQQRQVIDERAAKVFLLAAKISA 180

Query: 181 ITMNKAVALARTEAERKIEGAALARKRAKEAIDHFVFLSSKMVHSKQQRRDVVLGSGPSL 240
           ITMNKAVALARTEAERKIEGAALARKRAKEAIDHFVFLSSKMVHSKQQRRDVVLGSGPSL
Sbjct: 181 ITMNKAVALARTEAERKIEGAALARKRAKEAIDHFVFLSSKMVHSKQQRRDVVLGSGPSL 240

Query: 241 SPRNVALGSGPRPYSEATKSDNNGVGRVGIGNGNRSLAAVPVVQSNGGTNGKENAV 295
           SPRNVALGSGPRPYSEATKSDNNGVGRVGIGNGNRSLAAVPVVQSNGGTNGKENAV
Sbjct: 241 SPRNVALGSGPRPYSEATKSDNNGVGRVGIGNGNRSLAAVPVVQSNGGTNGKENAV 296

[Close]

BLAST of Spo13312.1 vs. NCBI nr
Match: gi|731327391|ref|XP_010674499.1| (PREDICTED: uncharacterized protein LOC104890637 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 273.5 bits (698), Expect = 4.400e-70
Identity = 167/299 (55.85%), Postives = 202/299 (67.56%), Query Frame = 1


		  
Query: 4   NPP--QQPQPSLSTVSASGKRCFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSFC 63
           NPP  Q PQ SLS  S++ K CF CNSD++W+LHN++ +   C+K CTSCVL L+ TSFC
Sbjct: 6   NPPFLQLPQ-SLS--SSAAKSCFNCNSDNNWILHNIRIQPG-CKKLCTSCVLKLHPTSFC 65

Query: 64  PTCFNLHDPNSLLP-PPIASSSSSINNRNLTCLKCSSISHSTCVPPKIPKSPYLCTTCSN 123
           PTCFNLHDPNSL P PP +SSSSS N+R LTCLKC+S+SH TCVPP  PKSPYLC  CSN
Sbjct: 66  PTCFNLHDPNSLNPLPPSSSSSSSSNHRTLTCLKCNSVSHITCVPPNTPKSPYLCPPCSN 125

Query: 124 PSLKFFDLKKPRKF-RDQPPSNGGCGSGSSSGGGEEPQ-----QRQVIDERAAKVFLLAA 183
           PS KFFD KKPRK   DQP S+GG   G +  GG   +     + Q +DERAA+V LLAA
Sbjct: 126 PSFKFFDFKKPRKIHHDQPQSDGGGNGGGNGSGGSHSKKVLEDEIQYLDERAARVLLLAA 185

Query: 184 KISAITMNKAVALARTEAERKIEGAALARKRAKEAIDHFVFLSSKMVHSK-QQRRDVVLG 243
           KIS I++NKA A ARTE ER++  AALARKRAKEAID  V LS K+   K QQRR+VV G
Sbjct: 186 KISTISINKAAAQARTEVERRVREAALARKRAKEAIDLVVSLSYKLSSVKQQQRREVVSG 245

Query: 244 SGPSLSPRNVALGSGPRPYSEATKSDNNGVGRVGIGNGNRSLAAVPVVQSNGGTNGKEN 293
            G +  P  V    G   ++    + ++ VG  G GNGN S+  VPV  +   +   EN
Sbjct: 246 PGSNFMPVKVEKNGG--GHNVGGVAGDHKVGN-GNGNGNGSVVVVPVPLAVVKSGNNEN 297

[Close]

BLAST of Spo13312.1 vs. NCBI nr
Match: gi|661881123|emb|CDP15181.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 139.0 bits (349), Expect = 1.300e-29
Identity = 109/293 (37.20%), Postives = 152/293 (51.88%), Query Frame = 1


		  
Query: 8   QPQPSLSTVSASGKR-CFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSFCPTCFN 67
           +P PS S+ S++    C  C   +  +LH+V+ R    R+ CT+CVL L+  SFCPTCF 
Sbjct: 8   KPDPSSSSASSTAPTTCGNCGVQERRLLHHVRHR-GIFRRLCTTCVLRLHPQSFCPTCFA 67

Query: 68  LHDPNSLLPPPIASSSSSINNRNLTCLKCSSISHSTCVPPKIPKSPYLCTTCSNPSLKFF 127
           ++ P+   PPP      S  N  +TC KC S SH  CV P  P +PY+C  C NP+   F
Sbjct: 68  VYHPS---PPP------SGPNDAVTCFKCYSSSHIHCVGPNYP-NPYVCPNCVNPNSPIF 127

Query: 128 DLKKPRKFRDQPPSNGGCGSGSSSGGGEEPQQRQVIDERAAKVFLLAAKISAITMNKAVA 187
            LKK +         G  GS +++G   E    +VID++AAKV L AA+I+A++M+KA  
Sbjct: 128 TLKKAKDL-------GIEGSEAANGNNGE---YRVIDKKAAKVLLAAARIAAVSMSKAAV 187

Query: 188 LARTEAERKIEGAALARKRAKEAIDHFVFLSSKMVHSKQQRRDV-----VLGSGPSLSPR 247
            AR EAER+ + AA  RKRA+EA++H  +L +K    K++         VLG     S  
Sbjct: 188 AARAEAERRAKEAAFTRKRAREALEHVAYLVAKEKLKKKESAAAATAVEVLGVAGRSSGV 247

Query: 248 NVALGSGPRPYSEATKSDNNGVGRVGIGNGNRSLAAVPVVQSNGGTNGKENAV 295
            V   SG    S  +  +   VG VG+G   R    V  V  +       NAV
Sbjct: 248 KVTNVSGNNVNSNVSSVN---VGVVGVGREGRRAGNVERVDGSNDVLAALNAV 276

[Close]

BLAST of Spo13312.1 vs. NCBI nr
Match: gi|970004580|ref|XP_015063090.1| (PREDICTED: uncharacterized protein LOC107008524 [Solanum pennellii])

HSP 1 Score: 137.5 bits (345), Expect = 3.800e-29
Identity = 95/240 (39.58%), Postives = 135/240 (56.25%), Query Frame = 1


		  
Query: 7   QQPQPSLSTVSASG--KRCFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSFCPTC 66
           +Q  P+ STV+       C  CN ++ W LHNV+ R    R+ CT+CVL L+  SFCPTC
Sbjct: 3   KQNFPNSSTVAPLPVPTTCGNCNVEERWFLHNVRHR-GLYRRLCTNCVLRLHIQSFCPTC 62

Query: 67  FNLHDPNSLLPPPIASSSSSINNRNLTCLKCSSISHSTCVPPKIPKSPYLCTTCSNPSLK 126
             +++P    PPP A+S+  ++     C KC S SH++CV    P  PY C  C NP+  
Sbjct: 63  LLVYNPT---PPPNAASNGLVS-----CSKCYSYSHNSCVGVN-PPHPYHCPLCVNPNTP 122

Query: 127 FFDLKKPRKFRDQPPSNGGCGSGSSSGGGEEPQQRQVIDERAAKVFLLAAKISAITMNKA 186
            F LKK R+         G G+          ++ +VID +AAKV L AAKI+A T+ KA
Sbjct: 123 LFSLKKGREV--------GLGN----------EESRVIDMKAAKVLLAAAKIAAGTVTKA 182

Query: 187 VALARTEAERKIEGAALARKRAKEAIDHFVFLSSKMVHSKQQRRDVVL--GSGPSLSPRN 243
              AR EAER+ + AA  RKRA+EAIDH  +L+++    K +++D++    +GP L   N
Sbjct: 183 ALAARVEAERRAKEAAFTRKRAREAIDHVAYLTAR---DKLKKKDILQYPSNGPGLGYGN 211

[Close]

BLAST of Spo13312.1 vs. NCBI nr
Match: gi|460369009|ref|XP_004230357.1| (PREDICTED: uncharacterized protein LOC101263762 [Solanum lycopersicum])

HSP 1 Score: 137.5 bits (345), Expect = 3.800e-29
Identity = 95/240 (39.58%), Postives = 135/240 (56.25%), Query Frame = 1


		  
Query: 7   QQPQPSLSTVSASG--KRCFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSFCPTC 66
           +Q  P+ STV+       C  CN ++ W LHNV+ R    R+ CT+CVL L+  SFCPTC
Sbjct: 3   KQNFPNSSTVAPLPVPTTCGNCNVEERWFLHNVRHR-GLYRRLCTNCVLRLHIQSFCPTC 62

Query: 67  FNLHDPNSLLPPPIASSSSSINNRNLTCLKCSSISHSTCVPPKIPKSPYLCTTCSNPSLK 126
             +++P    PPP A+S+  ++     C KC S SH++CV    P  PY C  C NP+  
Sbjct: 63  LLVYNPT---PPPNAASNGLVS-----CSKCYSYSHNSCVGVN-PPHPYHCPLCVNPNTP 122

Query: 127 FFDLKKPRKFRDQPPSNGGCGSGSSSGGGEEPQQRQVIDERAAKVFLLAAKISAITMNKA 186
            F LKK R+         G G+          ++ +VID +AAKV L AAKI+A T+ KA
Sbjct: 123 LFSLKKGREV--------GLGN----------EESRVIDMKAAKVLLAAAKIAAGTVTKA 182

Query: 187 VALARTEAERKIEGAALARKRAKEAIDHFVFLSSKMVHSKQQRRDVVL--GSGPSLSPRN 243
              AR EAER+ + AA  RKRA+EAIDH  +L+++    K +++D++    +GP L   N
Sbjct: 183 ALAARVEAERRAKEAAFTRKRAREAIDHVAYLTAR---DKLKKKDILQYPSNGPGLGYGN 211

[Close]

BLAST of Spo13312.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q7I4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_216930 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 9.900e-162
Identity = 294/296 (99.32%), Postives = 294/296 (99.32%), Query Frame = 1


		  
Query: 1   MSQNPPQQPQPSLSTVSASGKRCFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSF 60
           MSQNPPQQPQPSLSTVSASGKRCFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSF
Sbjct: 1   MSQNPPQQPQPSLSTVSASGKRCFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSF 60

Query: 61  CPTCFNLHDPNSLLPPPIASSSSSINNRNLTCLKCSSISHSTCVPPKIPKSPYLCTTCSN 120
           CPTCFNLHDPNSLLPPPIASSSSSINNRNLTCLKCSSISHSTCVPPKIPKSPYLCTTCSN
Sbjct: 61  CPTCFNLHDPNSLLPPPIASSSSSINNRNLTCLKCSSISHSTCVPPKIPKSPYLCTTCSN 120

Query: 121 PSLKFFDLKKPRKFRDQPPSNGGCGSGSSSGGGEE--PQQRQVIDERAAKVFLLAAKISA 180
           PSLKFFDLKKPRKFRDQPPSNGGCGSGSSSGGGEE  PQQRQVIDERAAKVFLLAAKISA
Sbjct: 121 PSLKFFDLKKPRKFRDQPPSNGGCGSGSSSGGGEEPQPQQRQVIDERAAKVFLLAAKISA 180

Query: 181 ITMNKAVALARTEAERKIEGAALARKRAKEAIDHFVFLSSKMVHSKQQRRDVVLGSGPSL 240
           ITMNKAVALARTEAERKIEGAALARKRAKEAIDHFVFLSSKMVHSKQQRRDVVLGSGPSL
Sbjct: 181 ITMNKAVALARTEAERKIEGAALARKRAKEAIDHFVFLSSKMVHSKQQRRDVVLGSGPSL 240

Query: 241 SPRNVALGSGPRPYSEATKSDNNGVGRVGIGNGNRSLAAVPVVQSNGGTNGKENAV 295
           SPRNVALGSGPRPYSEATKSDNNGVGRVGIGNGNRSLAAVPVVQSNGGTNGKENAV
Sbjct: 241 SPRNVALGSGPRPYSEATKSDNNGVGRVGIGNGNRSLAAVPVVQSNGGTNGKENAV 296

[Close]

BLAST of Spo13312.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FE72_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g079530 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.100e-70
Identity = 167/299 (55.85%), Postives = 202/299 (67.56%), Query Frame = 1


		  
Query: 4   NPP--QQPQPSLSTVSASGKRCFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSFC 63
           NPP  Q PQ SLS  S++ K CF CNSD++W+LHN++ +   C+K CTSCVL L+ TSFC
Sbjct: 6   NPPFLQLPQ-SLS--SSAAKSCFNCNSDNNWILHNIRIQPG-CKKLCTSCVLKLHPTSFC 65

Query: 64  PTCFNLHDPNSLLP-PPIASSSSSINNRNLTCLKCSSISHSTCVPPKIPKSPYLCTTCSN 123
           PTCFNLHDPNSL P PP +SSSSS N+R LTCLKC+S+SH TCVPP  PKSPYLC  CSN
Sbjct: 66  PTCFNLHDPNSLNPLPPSSSSSSSSNHRTLTCLKCNSVSHITCVPPNTPKSPYLCPPCSN 125

Query: 124 PSLKFFDLKKPRKF-RDQPPSNGGCGSGSSSGGGEEPQ-----QRQVIDERAAKVFLLAA 183
           PS KFFD KKPRK   DQP S+GG   G +  GG   +     + Q +DERAA+V LLAA
Sbjct: 126 PSFKFFDFKKPRKIHHDQPQSDGGGNGGGNGSGGSHSKKVLEDEIQYLDERAARVLLLAA 185

Query: 184 KISAITMNKAVALARTEAERKIEGAALARKRAKEAIDHFVFLSSKMVHSK-QQRRDVVLG 243
           KIS I++NKA A ARTE ER++  AALARKRAKEAID  V LS K+   K QQRR+VV G
Sbjct: 186 KISTISINKAAAQARTEVERRVREAALARKRAKEAIDLVVSLSYKLSSVKQQQRREVVSG 245

Query: 244 SGPSLSPRNVALGSGPRPYSEATKSDNNGVGRVGIGNGNRSLAAVPVVQSNGGTNGKEN 293
            G +  P  V    G   ++    + ++ VG  G GNGN S+  VPV  +   +   EN
Sbjct: 246 PGSNFMPVKVEKNGG--GHNVGGVAGDHKVGN-GNGNGNGSVVVVPVPLAVVKSGNNEN 297

[Close]

BLAST of Spo13312.1 vs. UniProtKB/TrEMBL
Match: A0A068V3J2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00042790001 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 9.000e-30
Identity = 109/293 (37.20%), Postives = 152/293 (51.88%), Query Frame = 1


		  
Query: 8   QPQPSLSTVSASGKR-CFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSFCPTCFN 67
           +P PS S+ S++    C  C   +  +LH+V+ R    R+ CT+CVL L+  SFCPTCF 
Sbjct: 8   KPDPSSSSASSTAPTTCGNCGVQERRLLHHVRHR-GIFRRLCTTCVLRLHPQSFCPTCFA 67

Query: 68  LHDPNSLLPPPIASSSSSINNRNLTCLKCSSISHSTCVPPKIPKSPYLCTTCSNPSLKFF 127
           ++ P+   PPP      S  N  +TC KC S SH  CV P  P +PY+C  C NP+   F
Sbjct: 68  VYHPS---PPP------SGPNDAVTCFKCYSSSHIHCVGPNYP-NPYVCPNCVNPNSPIF 127

Query: 128 DLKKPRKFRDQPPSNGGCGSGSSSGGGEEPQQRQVIDERAAKVFLLAAKISAITMNKAVA 187
            LKK +         G  GS +++G   E    +VID++AAKV L AA+I+A++M+KA  
Sbjct: 128 TLKKAKDL-------GIEGSEAANGNNGE---YRVIDKKAAKVLLAAARIAAVSMSKAAV 187

Query: 188 LARTEAERKIEGAALARKRAKEAIDHFVFLSSKMVHSKQQRRDV-----VLGSGPSLSPR 247
            AR EAER+ + AA  RKRA+EA++H  +L +K    K++         VLG     S  
Sbjct: 188 AARAEAERRAKEAAFTRKRAREALEHVAYLVAKEKLKKKESAAAATAVEVLGVAGRSSGV 247

Query: 248 NVALGSGPRPYSEATKSDNNGVGRVGIGNGNRSLAAVPVVQSNGGTNGKENAV 295
            V   SG    S  +  +   VG VG+G   R    V  V  +       NAV
Sbjct: 248 KVTNVSGNNVNSNVSSVN---VGVVGVGREGRRAGNVERVDGSNDVLAALNAV 276

[Close]

BLAST of Spo13312.1 vs. UniProtKB/TrEMBL
Match: K4B1E5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.600e-29
Identity = 95/240 (39.58%), Postives = 135/240 (56.25%), Query Frame = 1


		  
Query: 7   QQPQPSLSTVSASG--KRCFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSFCPTC 66
           +Q  P+ STV+       C  CN ++ W LHNV+ R    R+ CT+CVL L+  SFCPTC
Sbjct: 3   KQNFPNSSTVAPLPVPTTCGNCNVEERWFLHNVRHR-GLYRRLCTNCVLRLHIQSFCPTC 62

Query: 67  FNLHDPNSLLPPPIASSSSSINNRNLTCLKCSSISHSTCVPPKIPKSPYLCTTCSNPSLK 126
             +++P    PPP A+S+  ++     C KC S SH++CV    P  PY C  C NP+  
Sbjct: 63  LLVYNPT---PPPNAASNGLVS-----CSKCYSYSHNSCVGVN-PPHPYHCPLCVNPNTP 122

Query: 127 FFDLKKPRKFRDQPPSNGGCGSGSSSGGGEEPQQRQVIDERAAKVFLLAAKISAITMNKA 186
            F LKK R+         G G+          ++ +VID +AAKV L AAKI+A T+ KA
Sbjct: 123 LFSLKKGREV--------GLGN----------EESRVIDMKAAKVLLAAAKIAAGTVTKA 182

Query: 187 VALARTEAERKIEGAALARKRAKEAIDHFVFLSSKMVHSKQQRRDVVL--GSGPSLSPRN 243
              AR EAER+ + AA  RKRA+EAIDH  +L+++    K +++D++    +GP L   N
Sbjct: 183 ALAARVEAERRAKEAAFTRKRAREAIDHVAYLTAR---DKLKKKDILQYPSNGPGLGYGN 211

[Close]

BLAST of Spo13312.1 vs. UniProtKB/TrEMBL
Match: A0A0V0IMI7_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.700e-28
Identity = 87/222 (39.19%), Postives = 127/222 (57.21%), Query Frame = 1


		  
Query: 23  CFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSFCPTCFNLHDPNSLLPPPIASSS 82
           C  CN ++ W LHNV+ R    R+ CT+CVL L+  SFCPTC  +++P    PPP A+S+
Sbjct: 21  CGNCNVEERWFLHNVRHR-GLYRRLCTNCVLRLHIQSFCPTCLLVYNPT---PPPNAASN 80

Query: 83  SSINNRNLTCLKCSSISHSTCVPPKIPKSPYLCTTCSNPSLKFFDLKKPRKFRDQPPSNG 142
             ++     C KC S SH++CV    P  PY C  C NP+   F LKK R+         
Sbjct: 81  GLVS-----CFKCYSYSHNSCVGVN-PSHPYHCPLCVNPNTPLFSLKKGREV-------- 140

Query: 143 GCGSGSSSGGGEEPQQRQVIDERAAKVFLLAAKISAITMNKAVALARTEAERKIEGAALA 202
           G G+          ++ +V+D +AAKV L AAKI+A T+ KA   AR EAER+ + AA  
Sbjct: 141 GLGN----------EESRVVDMKAAKVLLAAAKIAAGTVTKAALAARVEAERRAKEAAFT 200

Query: 203 RKRAKEAIDHFVFLSSKMVHSKQQRRDVVL--GSGPSLSPRN 243
           RKRA+EA++H  +L+++   +K +++D +    +GP L   N
Sbjct: 201 RKRAREALEHVAYLTAR---NKLKKKDGLQFPSNGPGLGYGN 211

[Close]

BLAST of Spo13312.1 vs. TAIR (Arabidopsis)
Match: AT1G09520.1 (LOCATED IN: chloroplast)

HSP 1 Score: 98.2 bits (243), Expect = 8.900e-21
Identity = 79/229 (34.50%), Postives = 113/229 (49.34%), Query Frame = 1


		  
Query: 19  SGKRCFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSFCPTCFNLHDPNSLLPPPI 78
           S +RC  C S D WV+H V+ R +  R +CT C+L  +  SFCP CF L+D +   PP  
Sbjct: 22  STERCDDCGSSDAWVIHTVRLRAS-LRFFCTHCLLRNHPASFCPGCFALYDSS---PPSF 81

Query: 79  ASSSSSINNRNLTCLKCSSISHSTCVPPKIPKSPYLCTTCSNPSLKFFDLKKPRKFRDQP 138
              S SI         C S++H  C   +   S YLC  C +P+   F       FR   
Sbjct: 82  RRVSCSIKG-------CHSLTHIHCAGDESHLS-YLCPPCRDPNSFSF-------FRPIV 141

Query: 139 PSNGGCGSGSSSGGGEEPQQRQVIDERAAKVFLLAAKISAITMNKAVALARTEAERKIEG 198
             NG                 + +D+  ++ FL AAKI+A +MNKAV  A+ E +R+ + 
Sbjct: 142 DENGS----------------RFVDKALSEAFLCAAKIAASSMNKAVMTAKCETDRRGKE 201

Query: 199 AALARKRAKEAIDHFVFLSSKMVHSKQQRRDVV-------LGSGPSLSP 241
           AALA+KRA+EA++  V     M+ +K++ R VV       +   P LSP
Sbjct: 202 AALAKKRAREALEQVV-----MLDAKEKARSVVPKLKEAPVDQKPKLSP 210

[Close]

BLAST of Spo13312.1 vs. TAIR (Arabidopsis)
Match: AT3G17460.1 (PHD finger family protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.800e-13
Identity = 66/213 (30.99%), Postives = 96/213 (45.07%), Query Frame = 1


		  
Query: 21  KRCFTCNSDDHWVLHNVKSRDNECRKYCTSCVLNLYRTSFCPTCFNLHDPNSLLPPPIAS 80
           + C  C   +   +H V  +    R+ CT C+L  YR  FC  CFNL D N++ P     
Sbjct: 8   RECIVCREKEPSFIHTV-IKTGAFRRLCTDCLLKEYREHFCSVCFNLFD-NAVPPQARII 67

Query: 81  SSSSINNRNLTCL----KCSSISHSTCVPPKIPKSPYLCTTCSNPSLKFFDLKKPRKFRD 140
             +  ++ +L+C       S+ S S+  PP  P S + C  CSNP+  FF   K R   D
Sbjct: 68  CVNCPSSTHLSCSTQPPSSSAASSSSSAPP--PASSFTCQPCSNPNFTFF--PKSRVNED 127

Query: 141 QPPSNGGCGSGSSSGGGEEPQQRQVIDERAAKVFLLAAKISAITMNKAVALARTEAERKI 200
            P               E P     +  ++A   + A  IS   MNKAVAL + EA +KI
Sbjct: 128 VP--------------DETP-----LTPKSAMALVAAGNISVANMNKAVALLKEEALKKI 187

Query: 201 EGAALARKRAKEAIDH---FVFLSSKMVHSKQQ 227
             A  A+ RAK A+ +    V   SK+   +++
Sbjct: 188 IAAKTAKLRAKGALTNLQDIVIRQSKVTGKRKE 195

The following BLAST results are available for this feature:

BLAST of Spo13312.1 vs. NCBI nr
BLAST of Spo13312.1 vs. UniProtKB/TrEMBL
BLAST of Spo13312.1 vs. ExPASy Swiss-Prot
BLAST of Spo13312.1 vs. TAIR (Arabidopsis)

BLAST of Spo13312.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902035806\|gb\|KNA02628.1\|	1.4e-161	99.3	hypothetical protein SOVF_2169...	[more]
gi\|731327391\|ref\|XP_010674499.1\|	4.4e-70	55.8	PREDICTED: uncharacterized pro...	[more]
gi\|661881123\|emb\|CDP15181.1\|	1.3e-29	37.2	unnamed protein product [Coffe...	[more]
gi\|970004580\|ref\|XP_015063090.1\|	3.8e-29	39.5	PREDICTED: uncharacterized pro...	[more]
gi\|460369009\|ref\|XP_004230357.1\|	3.8e-29	39.5	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo13312.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9Q7I4_SPIOL	9.9e-162	99.3	Uncharacterized protein OS=Spi...	[more]
A0A0J8FE72_BETVU	3.1e-70	55.8	Uncharacterized protein OS=Bet...	[more]
A0A068V3J2_COFCA	9.0e-30	37.2	Uncharacterized protein OS=Cof...	[more]
K4B1E5_SOLLC	2.6e-29	39.5	Uncharacterized protein OS=Sol...	[more]
A0A0V0IMI7_SOLCH	1.7e-28	39.1	Putative ovule protein OS=Sola...	[more]

BLAST of Spo13312.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo13312.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G09520.1	8.9e-21	34.5	LOCATED IN: chloroplast	[more]
AT3G17460.1	1.8e-13	30.9	PHD finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 189..209 scor
None	No IPR available	PANTHER	PTHR34451	FAMILY NOT NAMED	coord: 7..134 score: 3.9E-50coord: 152..229 score: 3.9
None	No IPR available	PANTHER	PTHR34451:SF2	GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MTO12	coord: 7..134 score: 3.9E-50coord: 152..229 score: 3.9