Spo13439.1 (mRNA) | SpinachBase

Overview


Name	Spo13439.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Proliferating cell nuclear antigen
Location	SpoScf_00999 : 73208 .. 75872 (-)
Sequence length	1533

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATTTCCCGCCATTTCACCCCACTCCTTTCTTCCTCATAAATAGAGCTCGCACTACAGAGACAGGGTTCCCAGTCTTCCTACCACTTCCCTACTTCCCCACAATTTGCTCTCCTTCTCTCTCTTCACTCCCTCAAGAACAACTCAGAAACAATGTTTGAATTAAGGCTGGTACAGGGGAGCTTATTGAAAAGGGTGATTGACGCCATTAAAGATCTTGTCAATGACGCCAATTTTGATTGCTCTTCCACCGGATTCTCTCTGCAAGCCATGGATTCCAGTCATGTTGCTCTTGTCGCCCTCCTCCTGCGGTCCGAGGGGTTCGAGCATTTCCGATGTGACCGGACCTTCTCCATGGGTATGAGCATTGCTAACATGGCTAAGATGCTTAAATGCGCCTCTAATGATGATATTATTACCATCAAGGCTGATGACGGCACCGACACTGTCACTTTCATGTTCGAGAGCCCCTGTAAGTATTTCCTTTATATTACATTTTTGGTTTAATTGTTTCTGTTTTGGCTTAAATAGAATAGGGTTTTAGAAATGGGAAATTGATTTAGGGTTTTGGGCAATGGGAAATTGATTTAGGGTTTTGTAAAATGGGAATTTAATTTAGGGTTTTGTGAATGTGAAATTGATTTAGGGTTTTGTGAATGTGAAATTGATTTAGGGTTTTGGTGGGTTGTGTTTTGGCATTTGGAATCAGGATATCTTGCAGTAATGTTTGTCAATTAATTATGCCAGAATAGGGTTTTGCATTCATCATTTGGAGTTGGCCAATGTGGAATGTTTTTTGTCTATCTGATTGATTTAGATTCTATGATGCAAAGAGAGTGATACATTAAATTGGTTGTTTGTTAGATTTCACGTTATAAACATGGAGTGAATATTGGATTCAAGTTTTCTGCTTTGGTAGTTAGTAGTCACATAACCACCTGATGATCTTCTGTTGGAAGTTTATTGCTTTTGGGGGTTAATCATCTCTGATTTTGTTTGCTTAGTCCAAACAGTTGCAATTCCAGTTATTCCTTGTTCAATCAATTCATTGTTCAAAATAGTTACAGAGCACTTAATGTTGGAATGGGTTCCAGTTGTTTGTATCTTAATCTATGTCTGCATTTGGTTGCTTGTTTGTCATTGTGTTACCTTAACAATATGATACTTTATACGAAGTGTACTCCTTATGCATGCGATTCAAGTAGAATGTGTGATGAACATTTGCTGGCAATGTGATGAATGTTCAAGTTTTATATCTATGTACAGTGGTCCTCTTTGAGCTTTTGATGAATAGGACTATTCTATGACTTTCTGCGATATACATTAAAGTAGTATGCTTTCTTACTCATTGCTGCTGCCTGTCTAATGTGCAGCACAAGATAAGATATCAGATATTGAGATGAAACTGATGGACATTGACAGTGATCACCTTGGGATCCCAGATGCCGAATATGAAGCAATTGTTCGAATGCCATCAACAGAGTTTGGTAGCATATGTACAAGTCTTTCCACCATCGGTGATACTGGTAAGATGGGCTAATTGCTTATGTATATAACTAATGGTGTTTCCACTCACTACCATTCTTCTAAAAAGAGGAAGATAAGCTAACTTGATCCACTTATTGGTGCAGTTACTATTGCTGTGTCAAAGCAAGGTGTGACTTTTTCCACCAAAGGTGACATTGGATCTGGGAACATTACCTGCAGACAGAATTCATCAACAGAGAAGGTTTGTTCTTTCTCACTGCATCTACAAAAGTTACTCCAATTTGCAGAAATTACAATGTTTTGGATGATTATAGCAGTCTTGCTTATGAGAACTCATAATTTTGTTTTATTTTTGGTAATGTGGCAGCCAGAGGAGGCCACTATTATTGAGATGAAGGAACCAGTTGTTTTGACATTTGCTCTCAAGTATATCACTACATTCACCAAAGCAACATCTTTGTCCAGCCAAGTGACTATTAGCTTATCCTCGGATATGCCTGTGGTTGTGGAATACAAGATTGCTGAAATGGGCCACATCAGGTACTACCTGGCTCCCAAGATTGAAGAAGAGGATCTAGAGACCAACCTTCAGCCTGAAACCAGGCCTAGAACTGAGGCCCGAGAAGAAAATCATGCTAAACCCGAGGTCCATCAGGAGGCTCAAGAAGTTGTGCCTCTTGCTATAACGGGCACCAAGGAAGAAAATGGCACTGAAGATGAAATTGTTGAGGATTCCCAGGTTAAGATGGAAACTGAAAATGGAGCTGATGTGAAGCTTAAAGTGGAGAAAAAGCCATTGAAATCGGAATTAGCTATGGAGAAAGACTTTAAGATGGAAACTGATTCTGAAGCTGAGACAAAGCCTACGACAGAGGCAACACAACCAAAGTCAGAAGTTGAGGTTATGGAAGTAGAGGACTCTACTTGAGCAAACAATCACTGAAACATAACATGTTCATACTAGTGTTAGAGATTTGGGCAGTGTTTTATCTAGTCGGCTAGGTTTCCATGACCATTTTGGCATTTGATTTGATTATTTTTGGTCTGAAACCATTTTGATGTAAATCGGGTAGTTGGGTAATAGTAATTTAGGGCTTTCTTTCAAGAGTAACCTTCACTTTTGTAGTTGCTCAATGCAATGAACAAACAAGGAATTGGTGCAGAAGGGTGTTCTGGAT

mRNA sequence

CCATTTCCCGCCATTTCACCCCACTCCTTTCTTCCTCATAAATAGAGCTCGCACTACAGAGACAGGGTTCCCAGTCTTCCTACCACTTCCCTACTTCCCCACAATTTGCTCTCCTTCTCTCTCTTCACTCCCTCAAGAACAACTCAGAAACAATGTTTGAATTAAGGCTGGTACAGGGGAGCTTATTGAAAAGGGTGATTGACGCCATTAAAGATCTTGTCAATGACGCCAATTTTGATTGCTCTTCCACCGGATTCTCTCTGCAAGCCATGGATTCCAGTCATGTTGCTCTTGTCGCCCTCCTCCTGCGGTCCGAGGGGTTCGAGCATTTCCGATGTGACCGGACCTTCTCCATGGGTATGAGCATTGCTAACATGGCTAAGATGCTTAAATGCGCCTCTAATGATGATATTATTACCATCAAGGCTGATGACGGCACCGACACTGTCACTTTCATGTTCGAGAGCCCCTCACAAGATAAGATATCAGATATTGAGATGAAACTGATGGACATTGACAGTGATCACCTTGGGATCCCAGATGCCGAATATGAAGCAATTGTTCGAATGCCATCAACAGAGTTTGGTAGCATATGTACAAGTCTTTCCACCATCGGTGATACTGTTACTATTGCTGTGTCAAAGCAAGGTGTGACTTTTTCCACCAAAGGTGACATTGGATCTGGGAACATTACCTGCAGACAGAATTCATCAACAGAGAAGCCAGAGGAGGCCACTATTATTGAGATGAAGGAACCAGTTGTTTTGACATTTGCTCTCAAGTATATCACTACATTCACCAAAGCAACATCTTTGTCCAGCCAAGTGACTATTAGCTTATCCTCGGATATGCCTGTGGTTGTGGAATACAAGATTGCTGAAATGGGCCACATCAGGTACTACCTGGCTCCCAAGATTGAAGAAGAGGATCTAGAGACCAACCTTCAGCCTGAAACCAGGCCTAGAACTGAGGCCCGAGAAGAAAATCATGCTAAACCCGAGGTCCATCAGGAGGCTCAAGAAGTTGTGCCTCTTGCTATAACGGGCACCAAGGAAGAAAATGGCACTGAAGATGAAATTGTTGAGGATTCCCAGGTTAAGATGGAAACTGAAAATGGAGCTGATGTGAAGCTTAAAGTGGAGAAAAAGCCATTGAAATCGGAATTAGCTATGGAGAAAGACTTTAAGATGGAAACTGATTCTGAAGCTGAGACAAAGCCTACGACAGAGGCAACACAACCAAAGTCAGAAGTTGAGGTTATGGAAGTAGAGGACTCTACTTGAGCAAACAATCACTGAAACATAACATGTTCATACTAGTGTTAGAGATTTGGGCAGTGTTTTATCTAGTCGGCTAGGTTTCCATGACCATTTTGGCATTTGATTTGATTATTTTTGGTCTGAAACCATTTTGATGTAAATCGGGTAGTTGGGTAATAGTAATTTAGGGCTTTCTTTCAAGAGTAACCTTCACTTTTGTAGTTGCTCAATGCAATGAACAAACAAGGAATTGGTGCAGAAGGGTGTTCTGGAT

Coding sequence (CDS)

ATGTTTGAATTAAGGCTGGTACAGGGGAGCTTATTGAAAAGGGTGATTGACGCCATTAAAGATCTTGTCAATGACGCCAATTTTGATTGCTCTTCCACCGGATTCTCTCTGCAAGCCATGGATTCCAGTCATGTTGCTCTTGTCGCCCTCCTCCTGCGGTCCGAGGGGTTCGAGCATTTCCGATGTGACCGGACCTTCTCCATGGGTATGAGCATTGCTAACATGGCTAAGATGCTTAAATGCGCCTCTAATGATGATATTATTACCATCAAGGCTGATGACGGCACCGACACTGTCACTTTCATGTTCGAGAGCCCCTCACAAGATAAGATATCAGATATTGAGATGAAACTGATGGACATTGACAGTGATCACCTTGGGATCCCAGATGCCGAATATGAAGCAATTGTTCGAATGCCATCAACAGAGTTTGGTAGCATATGTACAAGTCTTTCCACCATCGGTGATACTGTTACTATTGCTGTGTCAAAGCAAGGTGTGACTTTTTCCACCAAAGGTGACATTGGATCTGGGAACATTACCTGCAGACAGAATTCATCAACAGAGAAGCCAGAGGAGGCCACTATTATTGAGATGAAGGAACCAGTTGTTTTGACATTTGCTCTCAAGTATATCACTACATTCACCAAAGCAACATCTTTGTCCAGCCAAGTGACTATTAGCTTATCCTCGGATATGCCTGTGGTTGTGGAATACAAGATTGCTGAAATGGGCCACATCAGGTACTACCTGGCTCCCAAGATTGAAGAAGAGGATCTAGAGACCAACCTTCAGCCTGAAACCAGGCCTAGAACTGAGGCCCGAGAAGAAAATCATGCTAAACCCGAGGTCCATCAGGAGGCTCAAGAAGTTGTGCCTCTTGCTATAACGGGCACCAAGGAAGAAAATGGCACTGAAGATGAAATTGTTGAGGATTCCCAGGTTAAGATGGAAACTGAAAATGGAGCTGATGTGAAGCTTAAAGTGGAGAAAAAGCCATTGAAATCGGAATTAGCTATGGAGAAAGACTTTAAGATGGAAACTGATTCTGAAGCTGAGACAAAGCCTACGACAGAGGCAACACAACCAAAGTCAGAAGTTGAGGTTATGGAAGTAGAGGACTCTACTTGA

Protein sequence

MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHFRCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMDIDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNITCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYKIAEMGHIRYYLAPKIEEEDLETNLQPETRPRTEAREENHAKPEVHQEAQEVVPLAITGTKEENGTEDEIVEDSQVKMETENGADVKLKVEKKPLKSELAMEKDFKMETDSEAETKPTTEATQPKSEVEVMEVEDST

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo13439	Spo13439	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo13439.1	Spo13439.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13439.1.utr5p.1	Spo13439.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13439.1.CDS.4	Spo13439.1.CDS.4	CDS
Spo13439.1.CDS.3	Spo13439.1.CDS.3	CDS
Spo13439.1.CDS.2	Spo13439.1.CDS.2	CDS
Spo13439.1.CDS.1	Spo13439.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13439.1.utr3p.1	Spo13439.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13439.1.exon.4	Spo13439.1.exon.4	exon
Spo13439.1.exon.3	Spo13439.1.exon.3	exon
Spo13439.1.exon.2	Spo13439.1.exon.2	exon
Spo13439.1.exon.1	Spo13439.1.exon.1	exon

Homology

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BLAST of Spo13439.1 vs. NCBI nr
Match: gi|902157301|gb|KNA06110.1| (hypothetical protein SOVF_184080 [Spinacia oleracea])

HSP 1 Score: 703.7 bits (1815), Expect = 1.700e-199
Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF
Sbjct: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD
Sbjct: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI
Sbjct: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
           TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK
Sbjct: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEEDLETNLQPETRPRTEAREENHAKPEVHQEAQEVVPLAITGTK 300
           IAEMGHIRYYLAPKIEEEDLETNLQPETRPRTEAREENHAKPEVHQEAQEVVPLAITGTK
Sbjct: 241 IAEMGHIRYYLAPKIEEEDLETNLQPETRPRTEAREENHAKPEVHQEAQEVVPLAITGTK 300

Query: 301 EENGTEDEIVEDSQVKMETENGADVKLKVEKKPLKSELAMEKDFKMETDSEAETKPTTEA 360
           EENGTEDEIVEDSQVKMETENGADVKLKVEKKPLKSELAMEKDFKMETDSEAETKPTTEA
Sbjct: 301 EENGTEDEIVEDSQVKMETENGADVKLKVEKKPLKSELAMEKDFKMETDSEAETKPTTEA 360

Query: 361 TQPKSEVEVMEVEDST 377
           TQPKSEVEVMEVEDST
Sbjct: 361 TQPKSEVEVMEVEDST 376

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BLAST of Spo13439.1 vs. NCBI nr
Match: gi|731315190|ref|XP_010690277.1| (PREDICTED: proliferating cell nuclear antigen-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 612.5 bits (1578), Expect = 5.100e-172
Identity = 332/386 (86.01%), Postives = 353/386 (91.45%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           MFELRLVQGSLLKR+IDAIKDLVNDANFDCSSTGFSLQAMDSSHVALV+LLLRSEGFEHF
Sbjct: 1   MFELRLVQGSLLKRLIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHF 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDRTFSMGMSIANMAKML+CASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD
Sbjct: 61  RCDRTFSMGMSIANMAKMLRCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDSDHLGIPDAEY+AIVRMPSTEF +ICTSLS+IGDTVTIAVSKQGVTFSTKGDIGSGNI
Sbjct: 121 IDSDHLGIPDAEYDAIVRMPSTEFANICTSLSSIGDTVTIAVSKQGVTFSTKGDIGSGNI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
           TCRQNSSTEKPEEATI+EMKEPVVLTFALKY+TTFTKATSLSSQVTISLSSDMPVVVEYK
Sbjct: 181 TCRQNSSTEKPEEATIVEMKEPVVLTFALKYMTTFTKATSLSSQVTISLSSDMPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEEDLETNLQPETRPRTEAREENHAK------------PEVHQEA 300
           IAE+G+IRYYLAPKIEEE+LETN QP TRPRTE REENHAK            PE   E 
Sbjct: 241 IAEIGYIRYYLAPKIEEEELETNPQPSTRPRTEPREENHAKPVPVPEAEPEPVPEPEPEP 300

Query: 301 QEVVPLAITGTKEENGTEDEIVEDSQVKMETENGADVKLKVEKKPLKSEL-AMEKDFKME 360
           +  VPLAI GTKEENG E +IVEDS+VKMETE+ ADVK + E+KP+K+EL A+E DFKME
Sbjct: 301 ERAVPLAIMGTKEENGAEADIVEDSRVKMETESAADVKPEKEEKPVKAELHALEPDFKME 360

Query: 361 TDSEAETKPTTEATQPKSEVEVMEVE 374
           TDSEAE KPT E TQPK+EVEVMEVE
Sbjct: 361 TDSEAEIKPTAETTQPKAEVEVMEVE 386

[Close]

BLAST of Spo13439.1 vs. NCBI nr
Match: gi|661882490|emb|CDP14070.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 429.5 bits (1103), Expect = 6.100e-117
Identity = 238/373 (63.81%), Postives = 286/373 (76.68%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           MFELRLVQGSLLK+V+++IKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEH+
Sbjct: 1   MFELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDR  +MGM++ANMAKMLKCA NDDIITIKADDGTDTVTFMFESPSQDKISD EMKLMD
Sbjct: 61  RCDRNLTMGMNLANMAKMLKCAGNDDIITIKADDGTDTVTFMFESPSQDKISDFEMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDS+HLGIP+AEYEAI+RMPS EF  IC  LS+IGDTV I+V+K+GV FS +GDIG+ NI
Sbjct: 121 IDSEHLGIPEAEYEAIIRMPSAEFARICRDLSSIGDTVVISVTKEGVRFSARGDIGAANI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
            CRQN++ +KPE+ATIIEM+EPV LTFAL+Y+ +FTKAT L+ QVTIS+SSD+PVVVEYK
Sbjct: 181 VCRQNATVDKPEDATIIEMQEPVTLTFALRYMNSFTKATPLAEQVTISMSSDLPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEEDLETNLQPETRPRTEAREENHAKPEVHQEAQEVVPLAITGTK 300
           +A MG+IRYYLAPKIEEE+ E     +T+PR E + +   KP+V  E  EV         
Sbjct: 241 VAGMGYIRYYLAPKIEEEEEEVAAHAQTKPRAETKLKVETKPKVEPELMEVA-------- 300

Query: 301 EENGTEDEIVEDSQVKMETENGADVKLKVEKKPLKSELAMEKDFKMETDSEAETKPTTEA 360
            E+  E +   +S+ K E +     KL  E KPL     ++   K+E    A T      
Sbjct: 301 -EDEKESKPPAESKPKEEPQLLECHKLDEESKPL-----VDGKPKVENKLGAST------ 350

Query: 361 TQPKSEVEVMEVE 374
                E+E+M++E
Sbjct: 361 ---NGEIEIMDIE 350

[Close]

BLAST of Spo13439.1 vs. NCBI nr
Match: gi|703088291|ref|XP_010093496.1| (Proliferating cell nuclear antigen large form [Morus notabilis])

HSP 1 Score: 421.4 bits (1082), Expect = 1.700e-114
Identity = 231/374 (61.76%), Postives = 285/374 (76.20%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           M ELRLVQG LLK+V+D++KDLVNDANFDCS+TGFSLQAMDSSHVALVALLLRSEGFEH+
Sbjct: 1   MLELRLVQGGLLKKVLDSLKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDR  S+GM+++NMAKMLKCA NDDI+TIKADD  D+VTFMFESP+QDKI+D +MKLMD
Sbjct: 61  RCDRNLSLGMNLSNMAKMLKCAGNDDIVTIKADDAADSVTFMFESPNQDKIADFDMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDS+HLGIP+AE++AIVRMPS EF  IC  LSTIGDTV I+V+K+GV FST+GDIG+ NI
Sbjct: 121 IDSEHLGIPEAEFQAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
            CR N+S +KPEEATIIEM+E V LTFAL+Y+ +FTKAT L++QVTISLSSD+PVVVEYK
Sbjct: 181 VCRHNTSVDKPEEATIIEMEETVSLTFALRYMNSFTKATPLANQVTISLSSDLPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEEDLETNLQPETRPRTEAREENHAKPEVHQEAQEVVPLAITGTK 300
           +AEMGHIR+YLAPKIEEE+ E   Q ETRP+ E + +   K E+     ++ P       
Sbjct: 241 VAEMGHIRFYLAPKIEEEE-EIEAQRETRPQVETKPKTKPKTEIEPPIDDIKP------- 300

Query: 301 EENGTEDEIVEDSQVKMETENGADVKLKVE-KKPLKSELAMEKDFKMETDSEAETKPTTE 360
                            + E+ +D+K K+E KKP           K E ++  E+KP  +
Sbjct: 301 -----------------KVEHVSDIKPKLEIKKP-----------KEEIEASGESKPQVD 335

Query: 361 ATQPKSEVEVMEVE 374
           A   K+E+EVM+VE
Sbjct: 361 A---KAEIEVMDVE 335

[Close]

BLAST of Spo13439.1 vs. NCBI nr
Match: gi|661887358|emb|CDP09138.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 417.9 bits (1073), Expect = 1.800e-113
Identity = 208/262 (79.39%), Postives = 241/262 (91.98%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           MFELRLVQGSLLK+V+DAIKDLVNDANFDCSS+GFSLQAMDSSHVALVALLLRSEGFEH+
Sbjct: 1   MFELRLVQGSLLKKVLDAIKDLVNDANFDCSSSGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDR FSMGM++ NMAKMLKCA NDDIITIK DDG+DTVTFMFESP+QDKI+D EMKLMD
Sbjct: 61  RCDRNFSMGMNLNNMAKMLKCAGNDDIITIKGDDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDS+HLGIP+AEY+AIVRMPS EF  IC  LS+IGDTV I+V+K+GV FST+GDIGS NI
Sbjct: 121 IDSEHLGIPEAEYQAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGSANI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
            CRQN++ +KPEEAT+IEM +PV LTFAL+Y+ +FTKA+ LS+ VTISLSS++PVVVEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNDPVSLTFALRYLNSFTKASPLSNTVTISLSSELPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEEDLET 263
           IAEMG+IR+YLAPKIEE++ ET
Sbjct: 241 IAEMGYIRFYLAPKIEEDEEET 262

[Close]

BLAST of Spo13439.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFU6_SPIOL (Proliferating cell nuclear antigen OS=Spinacia oleracea GN=SOVF_184080 PE=3 SV=1)

HSP 1 Score: 703.7 bits (1815), Expect = 1.200e-199
Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF
Sbjct: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD
Sbjct: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI
Sbjct: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
           TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK
Sbjct: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEEDLETNLQPETRPRTEAREENHAKPEVHQEAQEVVPLAITGTK 300
           IAEMGHIRYYLAPKIEEEDLETNLQPETRPRTEAREENHAKPEVHQEAQEVVPLAITGTK
Sbjct: 241 IAEMGHIRYYLAPKIEEEDLETNLQPETRPRTEAREENHAKPEVHQEAQEVVPLAITGTK 300

Query: 301 EENGTEDEIVEDSQVKMETENGADVKLKVEKKPLKSELAMEKDFKMETDSEAETKPTTEA 360
           EENGTEDEIVEDSQVKMETENGADVKLKVEKKPLKSELAMEKDFKMETDSEAETKPTTEA
Sbjct: 301 EENGTEDEIVEDSQVKMETENGADVKLKVEKKPLKSELAMEKDFKMETDSEAETKPTTEA 360

Query: 361 TQPKSEVEVMEVEDST 377
           TQPKSEVEVMEVEDST
Sbjct: 361 TQPKSEVEVMEVEDST 376

[Close]

BLAST of Spo13439.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CX17_BETVU (Proliferating cell nuclear antigen OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g024430 PE=3 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 3.500e-172
Identity = 332/386 (86.01%), Postives = 353/386 (91.45%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           MFELRLVQGSLLKR+IDAIKDLVNDANFDCSSTGFSLQAMDSSHVALV+LLLRSEGFEHF
Sbjct: 1   MFELRLVQGSLLKRLIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHF 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDRTFSMGMSIANMAKML+CASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD
Sbjct: 61  RCDRTFSMGMSIANMAKMLRCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDSDHLGIPDAEY+AIVRMPSTEF +ICTSLS+IGDTVTIAVSKQGVTFSTKGDIGSGNI
Sbjct: 121 IDSDHLGIPDAEYDAIVRMPSTEFANICTSLSSIGDTVTIAVSKQGVTFSTKGDIGSGNI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
           TCRQNSSTEKPEEATI+EMKEPVVLTFALKY+TTFTKATSLSSQVTISLSSDMPVVVEYK
Sbjct: 181 TCRQNSSTEKPEEATIVEMKEPVVLTFALKYMTTFTKATSLSSQVTISLSSDMPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEEDLETNLQPETRPRTEAREENHAK------------PEVHQEA 300
           IAE+G+IRYYLAPKIEEE+LETN QP TRPRTE REENHAK            PE   E 
Sbjct: 241 IAEIGYIRYYLAPKIEEEELETNPQPSTRPRTEPREENHAKPVPVPEAEPEPVPEPEPEP 300

Query: 301 QEVVPLAITGTKEENGTEDEIVEDSQVKMETENGADVKLKVEKKPLKSEL-AMEKDFKME 360
           +  VPLAI GTKEENG E +IVEDS+VKMETE+ ADVK + E+KP+K+EL A+E DFKME
Sbjct: 301 ERAVPLAIMGTKEENGAEADIVEDSRVKMETESAADVKPEKEEKPVKAELHALEPDFKME 360

Query: 361 TDSEAETKPTTEATQPKSEVEVMEVE 374
           TDSEAE KPT E TQPK+EVEVMEVE
Sbjct: 361 TDSEAEIKPTAETTQPKAEVEVMEVE 386

[Close]

BLAST of Spo13439.1 vs. UniProtKB/TrEMBL
Match: A0A068UZV2_COFCA (Proliferating cell nuclear antigen OS=Coffea canephora GN=GSCOC_T00039257001 PE=3 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 4.300e-117
Identity = 238/373 (63.81%), Postives = 286/373 (76.68%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           MFELRLVQGSLLK+V+++IKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEH+
Sbjct: 1   MFELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDR  +MGM++ANMAKMLKCA NDDIITIKADDGTDTVTFMFESPSQDKISD EMKLMD
Sbjct: 61  RCDRNLTMGMNLANMAKMLKCAGNDDIITIKADDGTDTVTFMFESPSQDKISDFEMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDS+HLGIP+AEYEAI+RMPS EF  IC  LS+IGDTV I+V+K+GV FS +GDIG+ NI
Sbjct: 121 IDSEHLGIPEAEYEAIIRMPSAEFARICRDLSSIGDTVVISVTKEGVRFSARGDIGAANI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
            CRQN++ +KPE+ATIIEM+EPV LTFAL+Y+ +FTKAT L+ QVTIS+SSD+PVVVEYK
Sbjct: 181 VCRQNATVDKPEDATIIEMQEPVTLTFALRYMNSFTKATPLAEQVTISMSSDLPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEEDLETNLQPETRPRTEAREENHAKPEVHQEAQEVVPLAITGTK 300
           +A MG+IRYYLAPKIEEE+ E     +T+PR E + +   KP+V  E  EV         
Sbjct: 241 VAGMGYIRYYLAPKIEEEEEEVAAHAQTKPRAETKLKVETKPKVEPELMEVA-------- 300

Query: 301 EENGTEDEIVEDSQVKMETENGADVKLKVEKKPLKSELAMEKDFKMETDSEAETKPTTEA 360
            E+  E +   +S+ K E +     KL  E KPL     ++   K+E    A T      
Sbjct: 301 -EDEKESKPPAESKPKEEPQLLECHKLDEESKPL-----VDGKPKVENKLGAST------ 350

Query: 361 TQPKSEVEVMEVE 374
                E+E+M++E
Sbjct: 361 ---NGEIEIMDIE 350

[Close]

BLAST of Spo13439.1 vs. UniProtKB/TrEMBL
Match: W9R1P0_9ROSA (Proliferating cell nuclear antigen OS=Morus notabilis GN=L484_001873 PE=3 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 1.200e-114
Identity = 231/374 (61.76%), Postives = 285/374 (76.20%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           M ELRLVQG LLK+V+D++KDLVNDANFDCS+TGFSLQAMDSSHVALVALLLRSEGFEH+
Sbjct: 1   MLELRLVQGGLLKKVLDSLKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDR  S+GM+++NMAKMLKCA NDDI+TIKADD  D+VTFMFESP+QDKI+D +MKLMD
Sbjct: 61  RCDRNLSLGMNLSNMAKMLKCAGNDDIVTIKADDAADSVTFMFESPNQDKIADFDMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDS+HLGIP+AE++AIVRMPS EF  IC  LSTIGDTV I+V+K+GV FST+GDIG+ NI
Sbjct: 121 IDSEHLGIPEAEFQAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
            CR N+S +KPEEATIIEM+E V LTFAL+Y+ +FTKAT L++QVTISLSSD+PVVVEYK
Sbjct: 181 VCRHNTSVDKPEEATIIEMEETVSLTFALRYMNSFTKATPLANQVTISLSSDLPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEEDLETNLQPETRPRTEAREENHAKPEVHQEAQEVVPLAITGTK 300
           +AEMGHIR+YLAPKIEEE+ E   Q ETRP+ E + +   K E+     ++ P       
Sbjct: 241 VAEMGHIRFYLAPKIEEEE-EIEAQRETRPQVETKPKTKPKTEIEPPIDDIKP------- 300

Query: 301 EENGTEDEIVEDSQVKMETENGADVKLKVE-KKPLKSELAMEKDFKMETDSEAETKPTTE 360
                            + E+ +D+K K+E KKP           K E ++  E+KP  +
Sbjct: 301 -----------------KVEHVSDIKPKLEIKKP-----------KEEIEASGESKPQVD 335

Query: 361 ATQPKSEVEVMEVE 374
           A   K+E+EVM+VE
Sbjct: 361 A---KAEIEVMDVE 335

[Close]

BLAST of Spo13439.1 vs. UniProtKB/TrEMBL
Match: A0A068UNF1_COFCA (Proliferating cell nuclear antigen OS=Coffea canephora GN=GSCOC_T00028347001 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.300e-113
Identity = 208/262 (79.39%), Postives = 241/262 (91.98%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           MFELRLVQGSLLK+V+DAIKDLVNDANFDCSS+GFSLQAMDSSHVALVALLLRSEGFEH+
Sbjct: 1   MFELRLVQGSLLKKVLDAIKDLVNDANFDCSSSGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDR FSMGM++ NMAKMLKCA NDDIITIK DDG+DTVTFMFESP+QDKI+D EMKLMD
Sbjct: 61  RCDRNFSMGMNLNNMAKMLKCAGNDDIITIKGDDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDS+HLGIP+AEY+AIVRMPS EF  IC  LS+IGDTV I+V+K+GV FST+GDIGS NI
Sbjct: 121 IDSEHLGIPEAEYQAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGSANI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
            CRQN++ +KPEEAT+IEM +PV LTFAL+Y+ +FTKA+ LS+ VTISLSS++PVVVEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNDPVSLTFALRYLNSFTKASPLSNTVTISLSSELPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEEDLET 263
           IAEMG+IR+YLAPKIEE++ ET
Sbjct: 241 IAEMGYIRFYLAPKIEEDEEET 262

[Close]

BLAST of Spo13439.1 vs. ExPASy Swiss-Prot
Match: PCNA_PEA (Proliferating cell nuclear antigen OS=Pisum sativum GN=PCNA PE=2 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 1.500e-115
Identity = 210/265 (79.25%), Postives = 239/265 (90.19%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           M ELRLVQGSLLK+V+++IK+LVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEH+
Sbjct: 1   MLELRLVQGSLLKKVLESIKELVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDR  SMGM++ NMAKMLKCA NDDIITIKADDG+DTVTFMFESP+QDKISD EMKLMD
Sbjct: 61  RCDRNLSMGMNLNNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDS+HLGIP+AEY AIVRMPS EF  IC  LS+IGDTV IAVSK+GV FSTKGDIGS NI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVIAVSKEGVKFSTKGDIGSANI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
            CRQN++ +KPEEAT+IEM EPV L FAL+Y+ +FTKAT LSS VTISLS+++PVVVEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVALQFALRYMNSFTKATPLSSSVTISLSNELPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEEDLETNLQ 266
           IAEMG++R+YLAPKIEE++ ET  Q
Sbjct: 241 IAEMGYVRFYLAPKIEEDEEETKPQ 265

[Close]

BLAST of Spo13439.1 vs. ExPASy Swiss-Prot
Match: PCNA_TOBAC (Proliferating cell nuclear antigen OS=Nicotiana tabacum GN=PCNA PE=2 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 9.700e-115
Identity = 206/262 (78.63%), Postives = 240/262 (91.60%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           M ELRLVQGSLLK+V+++IKDLVNDANFDCS+TGFSLQAMDSSHVALVALLLRSEGFEH+
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDR  SMGM++ANMAKMLKCA NDDIIT+KADDG+DTVTFMFESP+QDKI+D EMKLMD
Sbjct: 61  RCDRNISMGMNLANMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDS+HLGIP+AEY AIVRMPS EF  IC  LS+IGDTV I+V+K+GV FST+GDIG+ NI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFSRICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
            CRQN++ +KPEEAT+IEM EPV LTFAL+Y+ +FTKAT LS+ VTISLSS++PVVVEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYLNSFTKATPLSNTVTISLSSELPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEEDLET 263
           IAEMG+IR+YLAPKIEE++ ET
Sbjct: 241 IAEMGYIRFYLAPKIEEDEEET 262

[Close]

BLAST of Spo13439.1 vs. ExPASy Swiss-Prot
Match: PCNA1_DAUCA (Proliferating cell nuclear antigen OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 4.800e-114
Identity = 206/262 (78.63%), Postives = 239/262 (91.22%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           M ELRLVQGSLLK+V+D+IKDLVNDANFDCS+TGFSLQAMDSSHVALVA+LLRSEGFEH+
Sbjct: 1   MLELRLVQGSLLKKVMDSIKDLVNDANFDCSATGFSLQAMDSSHVALVAVLLRSEGFEHY 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDR  SMGM++ NMAKMLKCA NDDIITIKADDG+DTVTFMFESP+QDKI+D EMKLMD
Sbjct: 61  RCDRNISMGMNLGNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDS+HLGIP+AEY AIVRMPS EF  IC  LS+IGDTV I+V+K+GV FST+GDIG+ NI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
            CRQN++ +KPEEAT+IEM EPV LTFAL+Y+ +FTKA+ LSS VTISLSS++PVVVEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKASPLSSTVTISLSSELPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEEDLET 263
           IAEMG+IR+YLAPKIEEE+ E+
Sbjct: 241 IAEMGYIRFYLAPKIEEEEDES 262

[Close]

BLAST of Spo13439.1 vs. ExPASy Swiss-Prot
Match: PCNA2_DAUCA (Proliferating cell nuclear antigen large form OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 3.100e-113
Identity = 229/374 (61.23%), Postives = 275/374 (73.53%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           M ELRLVQG LLK+V+++IKDLVNDANFDCS++GFSLQAMDSSHVALVA+LLRSEGFEH+
Sbjct: 1   MLELRLVQGGLLKKVLESIKDLVNDANFDCSASGFSLQAMDSSHVALVAVLLRSEGFEHY 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDR  SMGM++ NMAKML+CA NDDI+T+KADD  D +TFMFESP+QDKISD EMKLMD
Sbjct: 61  RCDRNISMGMNLGNMAKMLRCAGNDDIVTMKADDDGDVITFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDS+HLGIP++EYEAIVRMPS EF  IC  LSTIGDTV I+V+K+GV FST+GDIG+ NI
Sbjct: 121 IDSEHLGIPESEYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
            CRQN+S +KPE+ATIIEM+E V LTFAL+Y+ +FTKAT L++QVTISLSS++PVVVEYK
Sbjct: 181 VCRQNTSVDKPEDATIIEMQETVSLTFALRYMNSFTKATPLANQVTISLSSELPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEEDLETN-LQPETRPRTEAREENHAKPEVHQEAQEVVPLAITGT 300
           IAEMG+IRYYLAPKIEEED   N  QP       A   N  K     E    V       
Sbjct: 241 IAEMGYIRYYLAPKIEEEDEAANYAQPAQNSAAAATSNNGTK---KNEGNNKV------D 300

Query: 301 KEENGTEDEIVEDSQVKMETENGADVKLKVEKKPLKSELAMEKDFKMETDSEAETKPTTE 360
            ++   + E V+DS+   + +  A  K K E         M+   K E D   E   T  
Sbjct: 301 SKKRAIKSEFVDDSEAATDAQPQAKAKTKTEAGEDDDVEVMDTKPKNEPDDGDEVMETKP 360

Query: 361 ATQPKSEVEVMEVE 374
            T+   EVEVM++E
Sbjct: 361 KTESNGEVEVMDIE 365

[Close]

BLAST of Spo13439.1 vs. ExPASy Swiss-Prot
Match: PCNA_CATRO (Proliferating cell nuclear antigen OS=Catharanthus roseus PE=2 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 5.300e-113
Identity = 204/265 (76.98%), Postives = 240/265 (90.57%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           M ELRLVQGSLLK+V++++KDLV DANFDCS++GFSLQAMDSSHVALVALLLRSEGFEH+
Sbjct: 1   MLELRLVQGSLLKKVLESLKDLVTDANFDCSASGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDR  SMGM++ NMAKMLKCA NDDIIT+KADDG+DTVTFMFESP+QDKISD EMKLMD
Sbjct: 61  RCDRNPSMGMNLNNMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDS+HLGIP+AEY AIVRMPS EF  IC  LS+IGDTV I+V+K+GV FST+GDIG+ NI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
            CRQN++ +KP+EATIIEM EPV LTFAL+Y+ +FTKAT LS+ VTISLSS++PVVVEYK
Sbjct: 181 VCRQNTTVDKPDEATIIEMNEPVSLTFALRYLNSFTKATPLSNNVTISLSSELPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEEDLETNLQ 266
           IAEMG+IR+YLAPKIEE+D E +L+
Sbjct: 241 IAEMGYIRFYLAPKIEEDDEEQSLE 265

[Close]

BLAST of Spo13439.1 vs. TAIR (Arabidopsis)
Match: AT1G07370.1 (proliferating cellular nuclear antigen 1)

HSP 1 Score: 402.9 bits (1034), Expect = 2.200e-112
Identity = 203/263 (77.19%), Postives = 236/263 (89.73%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           M ELRLVQGSLLK+V+++IKDLVNDANFDCSSTGFSLQAMDSSHVALV+LLLRSEGFEH+
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDR  SMGM++ NM+KMLKCA NDDIITIKADDG DTVTFMFESP+QDKI+D EMKLMD
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDS+HLGIPDAEY +IVRMPS EF  IC  LS+IGDTV I+V+K+GV FST GDIG+ NI
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSNEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
             RQN++ +KPE+A +IEMKEPV L+FAL+Y+ +FTKAT LS  VTISLSS++PVVVEYK
Sbjct: 181 VLRQNTTVDKPEDAIVIEMKEPVSLSFALRYMNSFTKATPLSDTVTISLSSELPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEEDLETN 264
           +AEMG+IRYYLAPKIEEE+ +TN
Sbjct: 241 VAEMGYIRYYLAPKIEEEE-DTN 262

[Close]

BLAST of Spo13439.1 vs. TAIR (Arabidopsis)
Match: AT2G29570.1 (proliferating cell nuclear antigen 2)

HSP 1 Score: 401.0 bits (1029), Expect = 8.200e-112
Identity = 199/259 (76.83%), Postives = 233/259 (89.96%), Query Frame = 1


		  
Query: 1   MFELRLVQGSLLKRVIDAIKDLVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHF 60
           M ELRLVQGSLLK+V++A+KDLVNDANFDCS+TGFSLQAMDSSHVALV+LLLRSEGFEH+
Sbjct: 1   MLELRLVQGSLLKKVLEAVKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 61  RCDRTFSMGMSIANMAKMLKCASNDDIITIKADDGTDTVTFMFESPSQDKISDIEMKLMD 120
           RCDR  SMGM++ NM+KMLKCA NDDIITIKADDG+DTVTFMFESP+QDKI+D EMKLMD
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSDHLGIPDAEYEAIVRMPSTEFGSICTSLSTIGDTVTIAVSKQGVTFSTKGDIGSGNI 180
           IDS+HLGIPDAEY +IVRMPS EF  IC  LS+IGDTV I+V+K+GV FST GDIG+ NI
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSGEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANI 180

Query: 181 TCRQNSSTEKPEEATIIEMKEPVVLTFALKYITTFTKATSLSSQVTISLSSDMPVVVEYK 240
             RQN++ +KPE+A +IEM EPV L+FAL+Y+ +FTKAT LS  VTISLSS++PVVVEYK
Sbjct: 181 VLRQNTTVDKPEDAIVIEMNEPVSLSFALRYMNSFTKATPLSETVTISLSSELPVVVEYK 240

Query: 241 IAEMGHIRYYLAPKIEEED 260
           +AEMG+IRYYLAPKIEEE+
Sbjct: 241 VAEMGYIRYYLAPKIEEEE 259

The following BLAST results are available for this feature:

BLAST of Spo13439.1 vs. NCBI nr
BLAST of Spo13439.1 vs. UniProtKB/TrEMBL
BLAST of Spo13439.1 vs. ExPASy Swiss-Prot
BLAST of Spo13439.1 vs. TAIR (Arabidopsis)

BLAST of Spo13439.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902157301\|gb\|KNA06110.1\|	1.7e-199	100.	hypothetical protein SOVF_1840...	[more]
gi\|731315190\|ref\|XP_010690277.1\|	5.1e-172	86.0	PREDICTED: proliferating cell ...	[more]
gi\|661882490\|emb\|CDP14070.1\|	6.1e-117	63.8	unnamed protein product [Coffe...	[more]
gi\|703088291\|ref\|XP_010093496.1\|	1.7e-114	61.7	Proliferating cell nuclear ant...	[more]
gi\|661887358\|emb\|CDP09138.1\|	1.8e-113	79.3	unnamed protein product [Coffe...	[more]

BLAST of Spo13439.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QFU6_SPIOL	1.2e-199	100.	Proliferating cell nuclear ant...	[more]
A0A0J8CX17_BETVU	3.5e-172	86.0	Proliferating cell nuclear ant...	[more]
A0A068UZV2_COFCA	4.3e-117	63.8	Proliferating cell nuclear ant...	[more]
W9R1P0_9ROSA	1.2e-114	61.7	Proliferating cell nuclear ant...	[more]
A0A068UNF1_COFCA	1.3e-113	79.3	Proliferating cell nuclear ant...	[more]

BLAST of Spo13439.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
PCNA_PEA	1.5e-115	79.2	Proliferating cell nuclear ant...	[more]
PCNA_TOBAC	9.7e-115	78.6	Proliferating cell nuclear ant...	[more]
PCNA1_DAUCA	4.8e-114	78.6	Proliferating cell nuclear ant...	[more]
PCNA2_DAUCA	3.1e-113	61.2	Proliferating cell nuclear ant...	[more]
PCNA_CATRO	5.3e-113	76.9	Proliferating cell nuclear ant...	[more]

BLAST of Spo13439.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G07370.1	2.2e-112	77.1	proliferating cellular nuclear...	[more]
AT2G29570.1	8.2e-112	76.8	proliferating cell nuclear ant...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000730	Proliferating cell nuclear antigen, PCNA	PRINTS	PR00339	PCNACYCLIN	coord: 34..52 score: 5.4E-64coord: 10..29 score: 5.4E-64coord: 56..80 score: 5.4E-64coord: 203..217 score: 5.4E-64coord: 241..258 score: 5.4E-64coord: 110..132 score: 5.4
IPR000730	Proliferating cell nuclear antigen, PCNA	HAMAP	MF_00317	DNApol_clamp_arch	coord: 2..255 score: 19
IPR000730	Proliferating cell nuclear antigen, PCNA	PANTHER	PTHR11352	PROLIFERATING CELL NUCLEAR ANTIGEN	coord: 1..265 score: 4.1E
IPR000730	Proliferating cell nuclear antigen, PCNA	TIGRFAMs	TIGR00590	TIGR00590	coord: 1..259 score: 5.5E
IPR022648	Proliferating cell nuclear antigen, PCNA, N-terminal	PFAM	PF00705	PCNA_N	coord: 1..124 score: 1.1
IPR022649	Proliferating cell nuclear antigen, PCNA, C-terminal	PFAM	PF02747	PCNA_C	coord: 127..254 score: 4.9
IPR022659	Proliferating cell nuclear antigen, PCNA, conserved site	PROSITE	PS00293	PCNA_2	coord: 61..79 scor
IPR022659	Proliferating cell nuclear antigen, PCNA, conserved site	PROSITE	PS01251	PCNA_1	coord: 34..57 scor
None	No IPR available	GENE3D	3.70.10.10		coord: 1..259 score: 5.4E
None	No IPR available	unknown	SSF55979	DNA clamp	coord: 127..255 score: 9.11E-40coord: 1..126 score: 3.05

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006275	regulation of DNA replication
cellular_component	GO:0042575	DNA polymerase complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0030337	DNA polymerase processivity factor activity