Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAACATCAAAGCAACAAAAGTCACCTTCCTTCTTACACTTCTCATCATCACAACAATCTCTTCCTTAACCGGGGCAACCCGGTCCAACCCGAACTCTAAGGGCACCAAGTCCAAGTCCAAGGGTGGAGGTGCTGGTTTTGGTGGTGGTAGCGGCGATAGCGGTGACGACTTCTTCGGGCCGGGTGGTGGGTTTGGAATACCCGGGTACAATGACCCGGGAATGTTCGGAGGCGGATACGGATACGGATACGGCTCCCCTAGCGGAGGCCACGGAAAGAGTGGGACTGTAAGACCAAGTGTGGTTTGTAAGGAAACAGGTCCTTGTTATATGAAGAAACTCCGGTGCCCGGCAAAGTGCTTTTACTCCTTTAGTAGGGCCGGTAAGGGTTACGGTGGCGGAGGTGGTGGTGGTGGGTGCACCATGGATTGCAAGAAGAATTGTATTGCTTATTGTTGA ATGATGAACATCAAAGCAACAAAAGTCACCTTCCTTCTTACACTTCTCATCATCACAACAATCTCTTCCTTAACCGGGGCAACCCGGTCCAACCCGAACTCTAAGGGCACCAAGTCCAAGTCCAAGGGTGGAGGTGCTGGTTTTGGTGGTGGTAGCGGCGATAGCGGTGACGACTTCTTCGGGCCGGGTGGTGGGTTTGGAATACCCGGGTACAATGACCCGGGAATGTTCGGAGGCGGATACGGATACGGATACGGCTCCCCTAGCGGAGGCCACGGAAAGAGTGGGACTGTAAGACCAAGTGTGGTTTGTAAGGAAACAGGTCCTTGTTATATGAAGAAACTCCGGTGCCCGGCAAAGTGCTTTTACTCCTTTAGTAGGGCCGGTAAGGGTTACGGTGGCGGAGGTGGTGGTGGTGGGTGCACCATGGATTGCAAGAAGAATTGTATTGCTTATTGTTGA ATGATGAACATCAAAGCAACAAAAGTCACCTTCCTTCTTACACTTCTCATCATCACAACAATCTCTTCCTTAACCGGGGCAACCCGGTCCAACCCGAACTCTAAGGGCACCAAGTCCAAGTCCAAGGGTGGAGGTGCTGGTTTTGGTGGTGGTAGCGGCGATAGCGGTGACGACTTCTTCGGGCCGGGTGGTGGGTTTGGAATACCCGGGTACAATGACCCGGGAATGTTCGGAGGCGGATACGGATACGGATACGGCTCCCCTAGCGGAGGCCACGGAAAGAGTGGGACTGTAAGACCAAGTGTGGTTTGTAAGGAAACAGGTCCTTGTTATATGAAGAAACTCCGGTGCCCGGCAAAGTGCTTTTACTCCTTTAGTAGGGCCGGTAAGGGTTACGGTGGCGGAGGTGGTGGTGGTGGGTGCACCATGGATTGCAAGAAGAATTGTATTGCTTATTGTTGA MMNIKATKVTFLLTLLIITTISSLTGATRSNPNSKGTKSKSKGGGAGFGGGSGDSGDDFFGPGGGFGIPGYNDPGMFGGGYGYGYGSPSGGHGKSGTVRPSVVCKETGPCYMKKLRCPAKCFYSFSRAGKGYGGGGGGGGCTMDCKKNCIAYC Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Spo13459.1 vs. NCBI nr
Match: gi|902146938|gb|KNA05117.1| (hypothetical protein SOVF_193250 [Spinacia oleracea]) HSP 1 Score: 297.7 bits (761), Expect = 1.100e-77 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1
BLAST of Spo13459.1 vs. NCBI nr
Match: gi|731369550|ref|XP_010696588.1| (PREDICTED: glycine-rich protein 2-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 214.9 bits (546), Expect = 9.600e-53 Identity = 117/155 (75.48%), Postives = 127/155 (81.94%), Query Frame = 1
BLAST of Spo13459.1 vs. NCBI nr
Match: gi|703084978|ref|XP_010092614.1| (hypothetical protein L484_006376 [Morus notabilis]) HSP 1 Score: 161.4 bits (407), Expect = 1.300e-36 Identity = 91/145 (62.76%), Postives = 106/145 (73.10%), Query Frame = 1
BLAST of Spo13459.1 vs. NCBI nr
Match: gi|351721048|ref|NP_001235149.1| (uncharacterized protein LOC100499725 precursor [Glycine max]) HSP 1 Score: 159.1 bits (401), Expect = 6.300e-36 Identity = 90/154 (58.44%), Postives = 109/154 (70.78%), Query Frame = 1
BLAST of Spo13459.1 vs. NCBI nr
Match: gi|734337635|gb|KHN08572.1| (hypothetical protein glysoja_014337 [Glycine soja]) HSP 1 Score: 157.9 bits (398), Expect = 1.400e-35 Identity = 89/154 (57.79%), Postives = 109/154 (70.78%), Query Frame = 1
BLAST of Spo13459.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCX8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193250 PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 7.900e-78 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1
BLAST of Spo13459.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BA53_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g199550 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 6.700e-53 Identity = 117/155 (75.48%), Postives = 127/155 (81.94%), Query Frame = 1
BLAST of Spo13459.1 vs. UniProtKB/TrEMBL
Match: W9QRB6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006376 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 8.800e-37 Identity = 91/145 (62.76%), Postives = 106/145 (73.10%), Query Frame = 1
BLAST of Spo13459.1 vs. UniProtKB/TrEMBL
Match: C6SVW2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G244800 PE=2 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 4.400e-36 Identity = 90/154 (58.44%), Postives = 109/154 (70.78%), Query Frame = 1
BLAST of Spo13459.1 vs. UniProtKB/TrEMBL
Match: A0A0B2PLW1_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_014337 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 9.700e-36 Identity = 89/154 (57.79%), Postives = 109/154 (70.78%), Query Frame = 1
BLAST of Spo13459.1 vs. TAIR (Arabidopsis)
Match: AT4G21620.1 (glycine-rich protein) HSP 1 Score: 134.4 bits (337), Expect = 5.800e-32 Identity = 86/147 (58.50%), Postives = 93/147 (63.27%), Query Frame = 1
BLAST of Spo13459.1 vs. TAIR (Arabidopsis)
Match: AT1G61255.1 (BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G21620.2)) HSP 1 Score: 84.0 bits (206), Expect = 9.000e-17 Identity = 71/153 (46.41%), Postives = 86/153 (56.21%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo13459.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo13459.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo13459.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo13459.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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