Spo13701.1 (mRNA) | SpinachBase

Overview


Name	Spo13701.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Prefoldin subunit family protein
Location	SpoScf_00277 : 331385 .. 339176 (+)
Sequence length	1731

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGACTCACTCACTTTCCCTATCTACAATGGCGACGGCGCGTGGGAAGGGAACGGTGACGTCACTGTCGTCGACGTTCCCAGCAGAGGAAGCTCGGAAAGCCGCCGACCTCGTAAACCACACGATTAATGAGAAGCGCAGTGAGCTCGACAACCTCCGGAGCTTCGTCGCCGACAATACTAACCTCATTAATCTCGTACAACGTCTTCCTGATGAACTCCACCACCATATTCAGGTATTCTAATTTCCCGGTTTTTTTTTGGAGTACGAGATTAGGGCGTGTTATATTTACCTGAATTCGGCTCATCGGAATGCATCGTAGTTTGTGAATTGAATTTGTTAAAACTTATCGGAATATGTTATAATAAGTTGAATATGATGCGCCTTTAATTTAATTTGTTTTTGTTTTTTATTTTTTTATTGGGGTGAATTTTCAGGTTCCGTTTGGAAAGGCAGCTTTCTTTCCCGGTCGTTTGGTTCATACTAATGAGTTCCTGGTAATTGAATTTATTATTTGATTTTTTTAATTTGCAATTTGAGTGATTATATTCCTGATTGGTTACTTTGAATTTTTGAGGTTTTCTGTTAATTGTTGTGAATTGGCCAAGAATGAGCTTTGATTTGTTGGCAATTCTGATTGAAATTTAGTTTGTTGTGAATTAGGGTTTCAAATTATTGATGTGTTGTGCAAAGTGTTACATTTTAGCAAAAAAAGTTGGAATTAAGCTTTAATCTAGAGGTTATTTGTGTTGGCTGGTCCATGAATTGTTGATATATGCAATGCAAATTTGTTTTCCTAGTTTAACGACTAACCAATTTGTTTTGTCCTTCATAATTAGAAAAATTTAATTCGTCATAGGAAAACATTTGTATATAACATGTGTATGTATACAACCGTGTTTAGTCACCCCAAATTTCTTAAAATTCAACCTCGTAGAGGGGTGAATTTTATGTGATGTGGGGTAACTAACCCTGTTGTATAAACTTACTAGTCTTCATATGAGTAGTACAGTATATGTTTTTTTAACAATGGGTTAGGAAACCTGTGCCGTTAGACTTCAGTTACCAGTGTGGCGAAACTTTGTTGGTAAGAATTGAGTTCCCATCCACAATGTTAGACTAAGAGAAGCCTGTTTGAGTGCGTATCAGGTTCTCCTAGGGGAGGGTTATTTTGCCGACAGAACAGCCAAACAAACTGTTGACATTCTTAAAAGACGAGGGCAGACGTTGGAGTCGCACGTTGATTCTGTCAAGGCTGTGATTAAAGATCTCAAAGCCGAGGCCTCATTTTTTTATAGAACTGCCGAAGAAGCTGCAGTAAGTTTGACTCTGGCTACTCGTATATAAGTTGTCCTTTATTGTGACTTATTTGTATTTTCTCAGTTTAGCTTATCTGTGCTTATTGCAGGAGGGTCTTGTGGAGATCAGAGAAGAATTAAGTGATGATGAAGATTCTGAAGGAAGTATGTCTAAAATAGGCTAATTTTCTCTCTTAACTCGATGATTGATTTTTCTTTGATGGTAGCATTTCTTGTGACATGCTGACTTCCATTGCTACGATAGTTATCTGCTGATTCAACAACAGCTCACTGCTGTTGCCAAAACCTTTCCTGTGCAATAGGGACTGATTTATTTATTTGTTCAAACACTTGGTAGAGAGGGATACTGCTTCGTTTTGTTATGATGTTTGAAGGATTTGTTTTTAATCAATGAGTAGTGTTCAACATGATAATTGCTTGACGACTGAGGAGCCTTGCTTGCGCTTTCTAATGAAAAGCTGTATGGATATGTCTGATGTTGAAATATATGGCCACCTGACCTCCTATGAACAAAGGAATTTCTTCTAATATCTGTATACCATCCAGGCATCCATTGTGTTTTATGTATGTGTATGGACTTGGGGAGGGAGGACTTGAGGTGGGTGAAATCTATTTTACCAATCAATTGAATTTATAAGAATTTTAACTAGCTTAGGGATGAAAATATTTGTTTATAAGCCAGGTTGTTGCACTGAACACCTTCAAAGTTTATTGGCTTTTTTGTGAGATTTCTAAGATAGTATAAGGCACGAGGTCATGTTTTTAAAATTATTGAATTAGTACTTCTATTTTAATGTATTGCAAATCGAATTGATGCTTTCTTTTTGTTTTTGTTTTGGTGGATACCTGGATTCTGCATTGTGATTTCCATGTTATCATAGATTTACTGGCTTCTGTCTTAGGAGCTGTTAAATTTACTACATCCTCACCCATTGCTTGCATATGATGGTAGCTTAAAGAGATATAATTCATAGAAGAAATGATATGGCGATATACACAGACACACATATTGTCAGTAGAGGGGTTGTTCACTTTTAATATGCATGGAATTCAGGTCAGGAAAAGGAAGATGCTGCTAGTGAGCCTGAAGTTGGTATTGGTAGTAGTGCTGCGGTACTTGATGATGAAGAATATGCTCGTATCATGTCCAGATTGGACGAACTTGAGAAAGAAGAACTTGAAGAAGAAGAAGAAGATGAAGATACTGAAGACCATAGAGATGTTACGAATGGTGAAGATTTCAATAACTCGGTAATTAACCAATCAGTTTTACCTTCAATCAATATAAAGGAAAGAGATGTTGGTGAAGAATTTAGAAAATTTCATACAATAATTTTTCTGACCGAGTTATTTATGTATTAACTATTGATTGATTGGGACCAGGAACAATCAGAGGTCCAACATCATACCAAAGTGCTTTCTGATAGTATTTCTCTACCAAATGATGCTGATAAATCAATAGTAAGACTTCTTGTGGCTTCCTAGGTTATGCATTCTTGGAAGACTATTGTTGGTTGCGTATGTTGACTTCTCCTGCTTGTTGCTTACATGCAGCATACATACTTGAATTTGCAGCCTAATCATAAAGGTACCTTTCTTTCTCCATTAAACTTTGACTTCTTATATGGCAAAGCATCACCTTACCCCTCCCCACCCCCTAAAGTTTGCGACAGGAGTGACTGTTTGGTCTTGTCGTGCAAGAAAGAACATTTTCTAAGCACTCTTTGTGGTTTTGGGGCTGGGGATTGTTGTGGGGATTTCAGTGTAGTTTTCTATCCTATGTCTTTCTGTTGATGGCCTTGATCTCGATACTTTCTTACATTTTTTTTTTATTATGAACAGATGATTGCTCTCGTGGCAAAGATATATTGCAAAAATTTGTTGAAAGACCAATGGAGGAAGATAATGTCCCTTCTGTGGTGAAGACCAGTTTTCCATCCGAGTCCAGGTCAAAATCTGAGGTAACGGGCTTTACTTTATAGGTCAACTTATCTTTCTGTTACTAGTCATATTTTCTGGATTTTTTAAGGGAATTTTATGGGATATCCCTGTACTTATGAAAAATTCAGGTGCTATCCTTCACATCAAATTTTGCACAAGGTATATTCCTTAAAGTTTATGTTATGCACACATTATGTGAAGCATAATATGTTGTTAGTTATTGTTGAATATTGTTGATGCGTCAGGGGGTTCATAGTTTGACGTACTTAACTTTTATTTAGAAGTATTTTATTAAGTTCTGTCAAATTATTAATTGTGAAAACTTTAAATTAAAATAAATGTGTCAATTAACTAACTAGGTAAAACTTTTCTGCCACTTCAACATTTGTCAGCAGAAATAACAGAACGTTACATTTTTGCATACATTGTACGGTTCAAAGACGTACTGAGCACAAAGTCAAGAGAAATCTATTTTATAAGCACTTCAGTATTTCTCTAAAACGCCTTGGCTTCAAAATAGTAAGAATAGGAAAAAGACCTTATCGTTTTCATTTTCTTTTGCCTCATGGAGAGGATAATGGTTCGAAACCCCAACCCCTGCTTTAATTAACCTGTCCCTTGTTCTCAGCCTGTCATGAGCTATGCTTTTGGGGACTTTTTGTTATATAAAGGCGCAAATCCCATTTGAAATGTACGGTGCGAGTTTGTAATGGAGGCAGTGTATAAAAAGGCGCGCCTAGGCTCTGAGCCGCAAGGCGATTGGAGCCAACGCCTTTTATTGTCTGGGGGAGGCGATTTCGATGAGGCGCACCTAAGGCGCACCAAGGCGCAAAAAGGCGCACTTTGAGGCGCAAAAAAGGAGCACCTACTATGGCACACACCAAATTTTCACTTTTTTGTTTACTTATTATTTGGGCGCCTCACTTCAATGAGGCGCACCCAATTGGTAAAAGGTACACCCGGTTGTACGTAGCTCTTCATGCAACCGGGTAGTTTTGGTTTTTAACCCCTCAAAAAGCACAATTTTATAGTTTAAAGCACATTTTTACAGGTTAAAGTACATTTTTATAGCTTAAAAGCAGATACATTTCAAAAGAACACATTGTTAGTACAAAAGAACATACGAGTGCGAAGAATTTGAGAGGATATGTAAACTGATGTTGGTTGCTCACCTTTTAAGTTTAGGTTTTTTCCCAATTGGAAGAAGATATTCAATATCATAATATTTGAAAAACATATGTGCATTAAAATTGTAAAAATGTGCTTTTAAACTGAAAATGTGCTTTTAAACTGAAAAATGTGCTTTCTTGAGGGATTAAAAAATACAAAACGATCCGTTTGCATGTAGATCTACGTACAACCGGGTGTACCTAATAATTTGTGAGGCGCACCAAGGCGCGCCTAAGGCGCTAGGAACTCCAAATCGCCTTGTTGCGCCTTGAGCCTTTTTATACATTGAATGGAGGTCTGCTGGAATTTGAGAGATTGAAACAATAGCTGCCCTGTACAGTGTACACACCACCCGTCCCACCCTGGGAATTGGAGCTAAAGTTCATTATTAACTTATCGATGACTTACTGGGGAAATCTCTATGCAGGAGACAACCCTCTAGACTTTGGATTCGAGTTAGACCACGACACAGAACGGCTAACGGCTAACAACCCTGGGCTTATTAAAAAAAAATAGCGGATTCTATCCGTCAAAGGCACAAGAAAAGAAAACCTTTTCTCACCATGAATACTGCCCCAGCAAAAGAAAGGGTGTGGGGGGGGGGGGGGGGGGGNGGGATAAGATCAACAAATTAGTTTCTTCGGAATTTGTAACCTGGTAGAAGTTGAATCAGATTCCAATCAAGACTGTTACTTGCATCACAAAACGAATATCACTGGAGAGGCGAAACAATTCTGTTGATTCTTTTTGTTGAATTTTCTATTGCATTTATCCATGTTAATTCAATTGAAATCCACAAGTTTCCTCTTTCCTTGATTCTGTCCTCCTTTCATGCTCTCTTCCTAGGGTTTGGAATTCCCCACATGAAGAACCACAGGTGGTTATCTCAATAAACTTACAGAACTTTGGTCACAGACTTCCACCCTGTATGTTGCTTTGACCAACGTCTTCAATCTCCAGTACCCCTCTGCCCATCCTCTTTAGCCATCTGCATTTTTGGGATTCATCACCATAGTCACTTAGCAGGACATTGTCAGTCCCACCGTAGTCACCTTTTGACATTGAAGAAATGATAATCATGGTGGCCGTTTAACCTGATGTGACAATGCCCAATATAAAAATCACATACCATGACAGTTACATACCGGGGGGTGTGGAAGCTTCTATCCAGTATTTTCTCTTGCTTTTCCTTGTTTCTGTTGATAGTTGGTGGCTTCATTTCGATCCACTGTGGTAGGATTGGGTCGTGTATACACAGTGGTCATGTTGGGTGGCTGAATAGTGATAATGTGATGGGTGGGCTAGTCTCAGAAAGAGATGGACATTATTAGGTGGTCGTTGTGGGCAGAGGGAGATTTAAGTGGTGGTTCTGGTGGGTGATAGAGGGACTTGACGTGATTGTGCAGGAAGGTCAGGAAGGAATAGGAAACTATGAGGTGTCATAACTGTGACAGAGCGAGAGAGAGAGATTAGGTTTTACTTGGATGGAGGATTACATATACGAGTTGGGATTTCAGTCTTATCATACCAAACAATATCGGAAATGATCTAAGGAAGGATACTTGCAAATGGCATATTAGGTTTAACTGTATACCCTATATTTTCATTTGCCTGTTATTCGCATTTCTTGTATTGTTAACACTTGATAGAAGGAATGGAGGGAGAGGATAATGGTTGACAAATATAGGAGATAAAATCTTGCTTCATGTAGCCGATCGGCCCGATCCCATCGTTGGGATTAAGGCTAGATTGTTGCTGTTGTTTTTTTTCATTTTTGACCTAATTTGAATCAAATAGCCCCTAACTGAGAGTATTGAAAGCAGCCCTAAGATTTAAGAAGATTTAGTTCACTCCTTTGTCTAATGGAGAACATGTGAAGTGACTAGATGAAAGCAGATAAGATTTATTTAGTTGAAGTGGTATTTGACTACTTGGGCTGGCTAATCAAACTTGTCTGCGCCTCTAGGATAATAGTGGTGGTTAAGGGCCCAAGGTATTGAACTAGTTGCTGATGTTGAGCTTGTTGATCCAAGTAGACGTGAAAGTTGATATCCATTGGATTTTCCCATAATTGGATGGTTAGTGTTTGCCATTAATCAGCCATGTCCGCTCCCTGGTTGCATGATGATTTTGCGTGATTTTCATATTCCGTATTTAGGCTCCATAATTCAGGCAATGAAGTGATTGGAAGTGCTCTTCATGTCAAGTCTTATAAGTTGCTTTTTTTGAGACTTTAGTTGATCAACTGCTGCACATTGCATGGCTCTATACCTGAGAGAAAATAATGGCACATGCTATTGTTTGTACCCTCATTTTTTTTTAATAACTAATATAGTTTTCTGTTTCTAATCACTAATCCCCCCTCCCCCAATACAACTTTTTTTTCAGGTTTATGTTCCTGCGCCTAAACCTGAAGTTGGCAATCAATTGTCTAGACAAGTAAAAACAGATAGTCTCAAGGCATGTCTTCTGTCCATCTCCCCCTCTCTCAGAGAAGGAAAAATCTTTTAAACATTTTGTAAAGTTCATCTCACCTTATCGCCATATCCTGATCTTTCATTCACCACAGGCTTTCACTGGGTCTATCATAGAGCGGACAGATAATTTACAAATTTCTCCGGATAGAGAACCTATTAATCAGGTAACTACGCCCTTCTCTAGTCTTATCATGATGGTTTTATATAATTTCATTTTAATAAGAGGTTACGTTCATATTTGCAGCCATCTAATTCTCAACCTTCAAAGCCGGTATCCAGATTTAAGATGCAGAGGAGGGGTGTTTAGAGGTTGAATCGCACAGATAAACACAGAGATTATTGTAAATTGTAGAGGACACAATGTGATATTTGCTCTAGAAGCGATGACTGATGAGCATCACTTAGAAGTGGAAGTCTGTAATGTTGACAATTGCAGTTGAAGGCTTGAAGCTGTTAATTTTGTAACATCTGCTATCATTGACTCGTCTAAAATGATTTTTTTTTACTCCGTATGTACAACCGGTTGTATCTTGTGCATGGTGTAATTAAAGCTATTTAATTGTTCATGTGCTTGTACCTTGTGAACACTCAAGAGAACAAAAAGTAGCCTGCAAGGTACAACCGGTATAGTGAAAATCTTCGGCCAAAATTGTGTCATATCCTCATTAGATGAACCCCTGCATAAACAATAGTGACATTCAGTTGACTGACTTGTGGGTATGCTTATCTGCTCAAGTCAATTGAATGCCCTTAGTCAAAGGTCAACTTTTGAGCAAGATAACAACTTAAACTTCATCTTCTCTTGACCCAAAAATAGTTATTCATGGACTGAAATTCAGACTTTTGGATTACTTCTTTTGTTTTGTTGTGCTTTATGATGATCGG

mRNA sequence

CTTGACTCACTCACTTTCCCTATCTACAATGGCGACGGCGCGTGGGAAGGGAACGGTGACGTCACTGTCGTCGACGTTCCCAGCAGAGGAAGCTCGGAAAGCCGCCGACCTCGTAAACCACACGATTAATGAGAAGCGCAGTGAGCTCGACAACCTCCGGAGCTTCGTCGCCGACAATACTAACCTCATTAATCTCGTACAACGTCTTCCTGATGAACTCCACCACCATATTCAGGTTCCGTTTGGAAAGGCAGCTTTCTTTCCCGGTCGTTTGGTTCATACTAATGAGTTCCTGGTTCTCCTAGGGGAGGGTTATTTTGCCGACAGAACAGCCAAACAAACTGTTGACATTCTTAAAAGACGAGGGCAGACGTTGGAGTCGCACGTTGATTCTGTCAAGGCTGTGATTAAAGATCTCAAAGCCGAGGCCTCATTTTTTTATAGAACTGCCGAAGAAGCTGCAGAGGGTCTTGTGGAGATCAGAGAAGAATTAAGTGATGATGAAGATTCTGAAGGAAGTCAGGAAAAGGAAGATGCTGCTAGTGAGCCTGAAGTTGGTATTGGTAGTAGTGCTGCGGTACTTGATGATGAAGAATATGCTCGTATCATGTCCAGATTGGACGAACTTGAGAAAGAAGAACTTGAAGAAGAAGAAGAAGATGAAGATACTGAAGACCATAGAGATGTTACGAATGGTGAAGATTTCAATAACTCGGAACAATCAGAGGTCCAACATCATACCAAAGTGCTTTCTGATAGTATTTCTCTACCAAATGATGCTGATAAATCAATACATACATACTTGAATTTGCAGCCTAATCATAAAGATGATTGCTCTCGTGGCAAAGATATATTGCAAAAATTTGTTGAAAGACCAATGGAGGAAGATAATGTCCCTTCTGTGGTGAAGACCAGTTTTCCATCCGAGTCCAGGTCAAAATCTGAGGTTTATGTTCCTGCGCCTAAACCTGAAGTTGGCAATCAATTGTCTAGACAAGTAAAAACAGATAGTCTCAAGGCTTTCACTGGGTCTATCATAGAGCGGACAGATAATTTACAAATTTCTCCGGATAGAGAACCTATTAATCAGCCATCTAATTCTCAACCTTCAAAGCCGGTATCCAGATTTAAGATGCAGAGGAGGGGTGTTTAGAGGTTGAATCGCACAGATAAACACAGAGATTATTGTAAATTGTAGAGGACACAATGTGATATTTGCTCTAGAAGCGATGACTGATGAGCATCACTTAGAAGTGGAAGTCTGTAATGTTGACAATTGCAGTTGAAGGCTTGAAGCTGTTAATTTTGTAACATCTGCTATCATTGACTCGTCTAAAATGATTTTTTTTTACTCCGTATGTACAACCGGTTGTATCTTGTGCATGGTGTAATTAAAGCTATTTAATTGTTCATGTGCTTGTACCTTGTGAACACTCAAGAGAACAAAAAGTAGCCTGCAAGGTACAACCGGTATAGTGAAAATCTTCGGCCAAAATTGTGTCATATCCTCATTAGATGAACCCCTGCATAAACAATAGTGACATTCAGTTGACTGACTTGTGGGTATGCTTATCTGCTCAAGTCAATTGAATGCCCTTAGTCAAAGGTCAACTTTTGAGCAAGATAACAACTTAAACTTCATCTTCTCTTGACCCAAAAATAGTTATTCATGGACTGAAATTCAGACTTTTGGATTACTTCTTTTGTTTTGTTGTGCTTTATGATGATCGG

Coding sequence (CDS)

ATGGCGACGGCGCGTGGGAAGGGAACGGTGACGTCACTGTCGTCGACGTTCCCAGCAGAGGAAGCTCGGAAAGCCGCCGACCTCGTAAACCACACGATTAATGAGAAGCGCAGTGAGCTCGACAACCTCCGGAGCTTCGTCGCCGACAATACTAACCTCATTAATCTCGTACAACGTCTTCCTGATGAACTCCACCACCATATTCAGGTTCCGTTTGGAAAGGCAGCTTTCTTTCCCGGTCGTTTGGTTCATACTAATGAGTTCCTGGTTCTCCTAGGGGAGGGTTATTTTGCCGACAGAACAGCCAAACAAACTGTTGACATTCTTAAAAGACGAGGGCAGACGTTGGAGTCGCACGTTGATTCTGTCAAGGCTGTGATTAAAGATCTCAAAGCCGAGGCCTCATTTTTTTATAGAACTGCCGAAGAAGCTGCAGAGGGTCTTGTGGAGATCAGAGAAGAATTAAGTGATGATGAAGATTCTGAAGGAAGTCAGGAAAAGGAAGATGCTGCTAGTGAGCCTGAAGTTGGTATTGGTAGTAGTGCTGCGGTACTTGATGATGAAGAATATGCTCGTATCATGTCCAGATTGGACGAACTTGAGAAAGAAGAACTTGAAGAAGAAGAAGAAGATGAAGATACTGAAGACCATAGAGATGTTACGAATGGTGAAGATTTCAATAACTCGGAACAATCAGAGGTCCAACATCATACCAAAGTGCTTTCTGATAGTATTTCTCTACCAAATGATGCTGATAAATCAATACATACATACTTGAATTTGCAGCCTAATCATAAAGATGATTGCTCTCGTGGCAAAGATATATTGCAAAAATTTGTTGAAAGACCAATGGAGGAAGATAATGTCCCTTCTGTGGTGAAGACCAGTTTTCCATCCGAGTCCAGGTCAAAATCTGAGGTTTATGTTCCTGCGCCTAAACCTGAAGTTGGCAATCAATTGTCTAGACAAGTAAAAACAGATAGTCTCAAGGCTTTCACTGGGTCTATCATAGAGCGGACAGATAATTTACAAATTTCTCCGGATAGAGAACCTATTAATCAGCCATCTAATTCTCAACCTTCAAAGCCGGTATCCAGATTTAAGATGCAGAGGAGGGGTGTTTAG

Protein sequence

MATARGKGTVTSLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRLPDELHHHIQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHVDSVKAVIKDLKAEASFFYRTAEEAAEGLVEIREELSDDEDSEGSQEKEDAASEPEVGIGSSAAVLDDEEYARIMSRLDELEKEELEEEEEDEDTEDHRDVTNGEDFNNSEQSEVQHHTKVLSDSISLPNDADKSIHTYLNLQPNHKDDCSRGKDILQKFVERPMEEDNVPSVVKTSFPSESRSKSEVYVPAPKPEVGNQLSRQVKTDSLKAFTGSIIERTDNLQISPDREPINQPSNSQPSKPVSRFKMQRRGV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo13701	Spo13701	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo13701.1	Spo13701.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13701.1.exon.1	Spo13701.1.exon.1	exon
Spo13701.1.exon.2	Spo13701.1.exon.2	exon
Spo13701.1.exon.3	Spo13701.1.exon.3	exon
Spo13701.1.exon.4	Spo13701.1.exon.4	exon
Spo13701.1.exon.5	Spo13701.1.exon.5	exon
Spo13701.1.exon.6	Spo13701.1.exon.6	exon
Spo13701.1.exon.7	Spo13701.1.exon.7	exon
Spo13701.1.exon.8	Spo13701.1.exon.8	exon
Spo13701.1.exon.9	Spo13701.1.exon.9	exon
Spo13701.1.exon.10	Spo13701.1.exon.10	exon
Spo13701.1.exon.11	Spo13701.1.exon.11	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13701.1.utr5p.1	Spo13701.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13701.1.CDS.1	Spo13701.1.CDS.1	CDS
Spo13701.1.CDS.2	Spo13701.1.CDS.2	CDS
Spo13701.1.CDS.3	Spo13701.1.CDS.3	CDS
Spo13701.1.CDS.4	Spo13701.1.CDS.4	CDS
Spo13701.1.CDS.5	Spo13701.1.CDS.5	CDS
Spo13701.1.CDS.6	Spo13701.1.CDS.6	CDS
Spo13701.1.CDS.7	Spo13701.1.CDS.7	CDS
Spo13701.1.CDS.8	Spo13701.1.CDS.8	CDS
Spo13701.1.CDS.9	Spo13701.1.CDS.9	CDS
Spo13701.1.CDS.10	Spo13701.1.CDS.10	CDS
Spo13701.1.CDS.11	Spo13701.1.CDS.11	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13701.1.utr3p.1	Spo13701.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo13701.1 vs. NCBI nr
Match: gi|902230678|gb|KNA21947.1| (hypothetical protein SOVF_038170 [Spinacia oleracea])

HSP 1 Score: 704.1 bits (1816), Expect = 1.300e-199
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 1


		  
Query: 1   MATARGKGTVTSLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRL 60
           MATARGKGTVTSLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRL
Sbjct: 1   MATARGKGTVTSLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRL 60

Query: 61  PDELHHHIQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHV 120
           PDELHHHIQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHV
Sbjct: 61  PDELHHHIQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHV 120

Query: 121 DSVKAVIKDLKAEASFFYRTAEEAAEGLVEIREELSDDEDSEGSQEKEDAASEPEVGIGS 180
           DSVKAVIKDLKAEASFFYRTAEEAAEGLVEIREELSDDEDSEGSQEKEDAASEPEVGIGS
Sbjct: 121 DSVKAVIKDLKAEASFFYRTAEEAAEGLVEIREELSDDEDSEGSQEKEDAASEPEVGIGS 180

Query: 181 SAAVLDDEEYARIMSRLDELEKEELEEEEEDEDTEDHRDVTNGEDFNNSEQSEVQHHTKV 240
           SAAVLDDEEYARIMSRLDELEKEELEEEEEDEDTEDHRDVTNGEDFNNSEQSEVQHHTKV
Sbjct: 181 SAAVLDDEEYARIMSRLDELEKEELEEEEEDEDTEDHRDVTNGEDFNNSEQSEVQHHTKV 240

Query: 241 LSDSISLPNDADKSIHTYLNLQPNHKDDCSRGKDILQKFVERPMEEDNVPSVVKTSFPSE 300
           LSDSISLPNDADKSIHTYLNLQPNHKDDCSRGKDILQKFVERPMEEDNVPSVVKTSFPSE
Sbjct: 241 LSDSISLPNDADKSIHTYLNLQPNHKDDCSRGKDILQKFVERPMEEDNVPSVVKTSFPSE 300

Query: 301 SRSKSEVYVPAPKPEVGNQLSRQVKTDSLKAFTGSIIERTDNLQISPDREPINQPSNSQP 360
           SRSKSEVYVPAPKPEVGNQLSRQVKTDSLKAFTGSIIERTDNLQISPDREPINQPSNSQP
Sbjct: 301 SRSKSEVYVPAPKPEVGNQLSRQVKTDSLKAFTGSIIERTDNLQISPDREPINQPSNSQP 360

Query: 361 SKPVSRFKMQRRGV 375
           SKPVSRFKMQRRGV
Sbjct: 361 SKPVSRFKMQRRGV 374

[Close]

BLAST of Spo13701.1 vs. NCBI nr
Match: gi|731366733|ref|XP_010695229.1| (PREDICTED: RNA polymerase II subunit 5-mediating protein homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 481.1 bits (1237), Expect = 1.800e-132
Identity = 277/373 (74.26%), Postives = 300/373 (80.43%), Query Frame = 1


		  
Query: 2   ATARGKGTVTSLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRLP 61
           A ARGKGTVTSL+S FPAEEARKA+  VN TI EKR ELDNL  FVADNTNLI+LVQRLP
Sbjct: 3   AAARGKGTVTSLASMFPAEEARKASQRVNDTILEKREELDNLNHFVADNTNLISLVQRLP 62

Query: 62  DELHHHIQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHVD 121
           DELHH+I VPFGK AFFPGRLVHTNEFLV LGEGYFADRTAKQTVDIL RRGQ L+S VD
Sbjct: 63  DELHHNIMVPFGKGAFFPGRLVHTNEFLVFLGEGYFADRTAKQTVDILNRRGQALKSQVD 122

Query: 122 SVKAVIKDLKAEASFFYRTAEEAAEGLVEIREELSDDEDSEGSQEKEDAASEPEVGIGSS 181
           S+KAVIKDLKAEASFF RTA EA EGLVEIREEL+DDEDS GS EK DA     VG GSS
Sbjct: 123 SLKAVIKDLKAEASFFDRTAAEAVEGLVEIREELTDDEDSGGSPEKADAPMVSGVGNGSS 182

Query: 182 AAVLDDEEYARIMSRLDELEKEELEEEEEDEDTEDHRDVTNGEDFNNSEQSEVQHHTKVL 241
           A ++DDEEY+RIM+RLDELEKEELEE    EDTE+H D T  EDF N ++   QH    L
Sbjct: 183 AGIVDDEEYSRIMARLDELEKEELEE----EDTEEHEDDTRDEDFQNLDR---QH----L 242

Query: 242 SDSISLPNDADKSIHTYLNLQPNHKDDCSRGKDILQKFVERPMEEDNVPSVVKTSFPSES 301
            DS S P DA+K  H   +LQP+HKD  S GKDI + FVER  EED VPSV KTSFPSES
Sbjct: 243 EDSTSKPTDANKLHHGNWSLQPSHKDKSSHGKDISRNFVERTTEEDYVPSVGKTSFPSES 302

Query: 302 RSKSEVYVPAPKPEVGNQLSRQVKTDSLKAFTGSIIERTDNLQISPDREPINQPSNSQPS 361
           +S SEV VP   P+ GN+LSR V TDSLKAFTGSI+ERTDNLQISPD+E INQPSNSQ S
Sbjct: 303 KSNSEVCVPMLNPDAGNRLSRPV-TDSLKAFTGSIVERTDNLQISPDKETINQPSNSQAS 362

Query: 362 KPVSRFKMQRRGV 375
           KPVSRFKMQRRGV
Sbjct: 363 KPVSRFKMQRRGV 363

[Close]

BLAST of Spo13701.1 vs. NCBI nr
Match: gi|657979282|ref|XP_008381601.1| (PREDICTED: RNA polymerase II subunit 5-mediating protein homolog [Malus domestica])

HSP 1 Score: 280.0 bits (715), Expect = 6.000e-72
Identity = 189/393 (48.09%), Postives = 244/393 (62.09%), Query Frame = 1


		  
Query: 3   TARGKGTVTSLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRLPD 62
           +A+G+GTVTSLSS FP E+A+KAA  V  TI EK+ +LD+LR F ADNT+L+NLV +LPD
Sbjct: 4   SAKGQGTVTSLSSLFPVEDAQKAAKRVEDTIAEKQQQLDHLRGFTADNTSLVNLVMKLPD 63

Query: 63  ELHHHIQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHVDS 122
            LHH I VPFGKAAFFPGRLVHTNEFLVLLGEGY+A+RT+KQTVDIL RRG+ L+S VDS
Sbjct: 64  HLHHDIMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVDILMRRGKELDSQVDS 123

Query: 123 VKAVIKDLKAEASFFYRTAEEAAEGLVEIREELSDDEDSEGSQE----KEDAASEPEVGI 182
           + AV+ DLK EASF   TA EAAEGLVEI+E+  ++  S+G  E    K+D+ S    G 
Sbjct: 124 LNAVLADLKFEASFIDSTASEAAEGLVEIKEDYVEESSSDGESELGPLKQDSPSS--TGA 183

Query: 183 GSSAAVLDDEEYARIMSRLDELEKEELEEEEEDEDTEDHRDVTNGE------DFNNSEQS 242
            ++    +DEEYARI++R+DELEKEELE E E    E+  D  + E      D +     
Sbjct: 184 DNTKVSDEDEEYARILARMDELEKEELEAESEIVSEEEQSDNESDENKKIKVDLHQFPDH 243

Query: 243 EVQHHTKVLSDSISLPNDADKSIHTYLNLQPNHKDDCSRGKDILQKFVERPMEEDNVPSV 302
           +  H     S+  S+P    ++       + +  D  +R    +Q   E      N+   
Sbjct: 244 KSLHQNGKFSEE-SMPRKPPETNDAIAPSKESFIDQRNRSGLTVQSIPEETSSRGNI--- 303

Query: 303 VKTSFPSESRSKSEVY-----------VPAPKPEVGNQLSRQVKTDSLKAFTGSIIERTD 362
               FP+  +SKSE             VP+P  +V  Q S+  K D  KAFTGSI+ER  
Sbjct: 304 ----FPNAMKSKSEKALVPPKVEDVQAVPSPISQVTLQSSKP-KFDDQKAFTGSIVERVH 363

Query: 363 NLQISPDRE--PINQPSNSQPSKPVSRFKMQRR 373
           NLQI    +    +Q S+SQPSKPVSRF+MQR+
Sbjct: 364 NLQIDSRNQTSATSQSSDSQPSKPVSRFRMQRK 385

[Close]

BLAST of Spo13701.1 vs. NCBI nr
Match: gi|702244929|ref|XP_010052068.1| (PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X1 [Eucalyptus grandis])

HSP 1 Score: 277.3 bits (708), Expect = 3.900e-71
Identity = 187/389 (48.07%), Postives = 236/389 (60.67%), Query Frame = 1


		  
Query: 8   GTVTSLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRLPDELHHH 67
           GTVT L+S FPA+EA+KAA  V   I EKR ELD +R F ADN  L+NLVQ+LP+ELHH 
Sbjct: 7   GTVTPLASMFPADEAQKAAGRVQDAIAEKRRELDRVRGFAADNAALVNLVQKLPEELHHD 66

Query: 68  IQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHVDSVKAVI 127
           + VPFGKAAFFPGRL+HTNEF VLLGEGY+A+RT+KQTV+ILKRRG+ LE+HVDS+K++I
Sbjct: 67  VMVPFGKAAFFPGRLIHTNEFTVLLGEGYYAERTSKQTVEILKRRGKALETHVDSLKSII 126

Query: 128 KDLKAEASFFYRTAEEAAEGLVEIREELSDDEDSEGSQEKEDAASEPEVGIGSSAAVL-D 187
           +DLK EASFF +TA EAAEGLVEIREELS +E  EGS E       P +       +L +
Sbjct: 127 EDLKTEASFFDKTASEAAEGLVEIREELSGEESDEGSSELGQKEDAPSISAEDKGKILNE 186

Query: 188 DEEYARIMSRLDELEKEELEEEEEDEDTEDHRDVT------------NGEDFNNSEQSEV 247
           DEEY R+MS+LDELEKEEL  E  D   E+  +V             N +D   S     
Sbjct: 187 DEEYDRLMSKLDELEKEELAAEAADNIEEETNEVDPDVVSDQSSFHQNLKDLEGSHSCMP 246

Query: 248 QHHTK-------VLSDSISLPNDADKSIHTYLNLQPNHKDDCSRGKDILQKFVERPMEED 307
             H++        L  +   P   +K   +   +  + KD  S G D L   ++ P   D
Sbjct: 247 PSHSERQASNEEFLRQTRQQPTLVEKLNPSDFTIASSQKDKTSHGNDPLWN-LKGPNIAD 306

Query: 308 NVPSVVKTSFPSES-RSKSEVYVPAPKPEVGNQLSRQVKTDSLKAFTGSIIERTDNLQIS 367
             P +        +  S +EV +  PKP+V          DSL+AFTGSIIE + NL I+
Sbjct: 307 KSPKLPALEENDHAGSSNNEVPIQPPKPKV----------DSLRAFTGSIIEHSPNLPIN 366

Query: 368 PDREPINQPS---NSQPSKPVSRFKMQRR 373
           P  EP    S    SQ SKP+SRF+MQR+
Sbjct: 367 PG-EPSATSSKVPGSQSSKPLSRFRMQRK 383

[Close]

BLAST of Spo13701.1 vs. NCBI nr
Match: gi|823130098|ref|XP_012451923.1| (PREDICTED: RNA polymerase II subunit 5-mediating protein homolog [Gossypium raimondii])

HSP 1 Score: 273.9 bits (699), Expect = 4.300e-70
Identity = 185/401 (46.13%), Postives = 238/401 (59.35%), Query Frame = 1


		  
Query: 1   MATARGKGTVTSLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRL 60
           M  +  KG VTSLSS FPAEE +KAA +V   ++EK++E++ L+ F+ADNT+LINLVQ+L
Sbjct: 1   MGKSEVKGMVTSLSSMFPAEEVQKAAKMVEEKLSEKQNEMNQLKEFIADNTSLINLVQKL 60

Query: 61  PDELHHHIQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHV 120
           PDELHH I VPFGKAAFFPGRL+HTNEFLVLLGE Y+ +RTAKQTV+ILKRRG++LES V
Sbjct: 61  PDELHHDIMVPFGKAAFFPGRLIHTNEFLVLLGESYYTERTAKQTVEILKRRGKSLESKV 120

Query: 121 DSVKAVIKDLKAEASFFYRTAEEAAEGLVEIREELSDDEDSEGSQEKEDAASEPEVG-IG 180
           D++KAV++DLKAEASFF  TA EAAEGLVEIRE   D+     SQ        P V    
Sbjct: 121 DALKAVMQDLKAEASFFDSTASEAAEGLVEIREYEEDNSTERASQSGSLELETPSVAEAD 180

Query: 181 SSAAVLDDEEYARIMSRLDELEKEELEEEEEDEDTEDHRDVTNG--EDFNNSEQSEVQHH 240
           +     +D+EY RIMSRL+ELEKEEL  E+ +E+ ED  +  N    D N  E ++   H
Sbjct: 181 NKMGASEDDEYERIMSRLEELEKEELAAEDNEENLEDEDEDANAVESDSNEDELTKAAFH 240

Query: 241 TKVLSDSISLPNDADKSIHTYLNLQPNHKDDCSR-------GKDILQKFVERPMEEDNVP 300
            K                ++YL+    + +  SR       GK+ +++  ++   +D   
Sbjct: 241 RK------------KDECYSYLDHGQRYSESQSRKQLQQFNGKEPIEEMSDKYKHQDLTN 300

Query: 301 SVVKTSFPSESRSKSE-----------------VYVPAPKPEVGNQLSRQVKTDSLKAFT 360
               T    E  +K E                 +   AP  +   Q S+  + DS KAFT
Sbjct: 301 QFASTGLTEEPVTKGEISHGRIIQQDTKTLSPSINASAPFEKKSVQTSK-TEFDSSKAFT 360

Query: 361 GSIIERTDNLQISP--DREPINQPSNSQPSKPVSRFKMQRR 373
           GSI+E T NL  S         Q S SQPSKPVSRFKMQR+
Sbjct: 361 GSIVEHTQNLDKSSVGTNTTSLQSSGSQPSKPVSRFKMQRK 388

[Close]

BLAST of Spo13701.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RSY9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_038170 PE=4 SV=1)

HSP 1 Score: 704.1 bits (1816), Expect = 8.900e-200
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 1


		  
Query: 1   MATARGKGTVTSLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRL 60
           MATARGKGTVTSLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRL
Sbjct: 1   MATARGKGTVTSLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRL 60

Query: 61  PDELHHHIQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHV 120
           PDELHHHIQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHV
Sbjct: 61  PDELHHHIQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHV 120

Query: 121 DSVKAVIKDLKAEASFFYRTAEEAAEGLVEIREELSDDEDSEGSQEKEDAASEPEVGIGS 180
           DSVKAVIKDLKAEASFFYRTAEEAAEGLVEIREELSDDEDSEGSQEKEDAASEPEVGIGS
Sbjct: 121 DSVKAVIKDLKAEASFFYRTAEEAAEGLVEIREELSDDEDSEGSQEKEDAASEPEVGIGS 180

Query: 181 SAAVLDDEEYARIMSRLDELEKEELEEEEEDEDTEDHRDVTNGEDFNNSEQSEVQHHTKV 240
           SAAVLDDEEYARIMSRLDELEKEELEEEEEDEDTEDHRDVTNGEDFNNSEQSEVQHHTKV
Sbjct: 181 SAAVLDDEEYARIMSRLDELEKEELEEEEEDEDTEDHRDVTNGEDFNNSEQSEVQHHTKV 240

Query: 241 LSDSISLPNDADKSIHTYLNLQPNHKDDCSRGKDILQKFVERPMEEDNVPSVVKTSFPSE 300
           LSDSISLPNDADKSIHTYLNLQPNHKDDCSRGKDILQKFVERPMEEDNVPSVVKTSFPSE
Sbjct: 241 LSDSISLPNDADKSIHTYLNLQPNHKDDCSRGKDILQKFVERPMEEDNVPSVVKTSFPSE 300

Query: 301 SRSKSEVYVPAPKPEVGNQLSRQVKTDSLKAFTGSIIERTDNLQISPDREPINQPSNSQP 360
           SRSKSEVYVPAPKPEVGNQLSRQVKTDSLKAFTGSIIERTDNLQISPDREPINQPSNSQP
Sbjct: 301 SRSKSEVYVPAPKPEVGNQLSRQVKTDSLKAFTGSIIERTDNLQISPDREPINQPSNSQP 360

Query: 361 SKPVSRFKMQRRGV 375
           SKPVSRFKMQRRGV
Sbjct: 361 SKPVSRFKMQRRGV 374

[Close]

BLAST of Spo13701.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B922_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g123660 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 1.200e-132
Identity = 277/373 (74.26%), Postives = 300/373 (80.43%), Query Frame = 1


		  
Query: 2   ATARGKGTVTSLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRLP 61
           A ARGKGTVTSL+S FPAEEARKA+  VN TI EKR ELDNL  FVADNTNLI+LVQRLP
Sbjct: 3   AAARGKGTVTSLASMFPAEEARKASQRVNDTILEKREELDNLNHFVADNTNLISLVQRLP 62

Query: 62  DELHHHIQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHVD 121
           DELHH+I VPFGK AFFPGRLVHTNEFLV LGEGYFADRTAKQTVDIL RRGQ L+S VD
Sbjct: 63  DELHHNIMVPFGKGAFFPGRLVHTNEFLVFLGEGYFADRTAKQTVDILNRRGQALKSQVD 122

Query: 122 SVKAVIKDLKAEASFFYRTAEEAAEGLVEIREELSDDEDSEGSQEKEDAASEPEVGIGSS 181
           S+KAVIKDLKAEASFF RTA EA EGLVEIREEL+DDEDS GS EK DA     VG GSS
Sbjct: 123 SLKAVIKDLKAEASFFDRTAAEAVEGLVEIREELTDDEDSGGSPEKADAPMVSGVGNGSS 182

Query: 182 AAVLDDEEYARIMSRLDELEKEELEEEEEDEDTEDHRDVTNGEDFNNSEQSEVQHHTKVL 241
           A ++DDEEY+RIM+RLDELEKEELEE    EDTE+H D T  EDF N ++   QH    L
Sbjct: 183 AGIVDDEEYSRIMARLDELEKEELEE----EDTEEHEDDTRDEDFQNLDR---QH----L 242

Query: 242 SDSISLPNDADKSIHTYLNLQPNHKDDCSRGKDILQKFVERPMEEDNVPSVVKTSFPSES 301
            DS S P DA+K  H   +LQP+HKD  S GKDI + FVER  EED VPSV KTSFPSES
Sbjct: 243 EDSTSKPTDANKLHHGNWSLQPSHKDKSSHGKDISRNFVERTTEEDYVPSVGKTSFPSES 302

Query: 302 RSKSEVYVPAPKPEVGNQLSRQVKTDSLKAFTGSIIERTDNLQISPDREPINQPSNSQPS 361
           +S SEV VP   P+ GN+LSR V TDSLKAFTGSI+ERTDNLQISPD+E INQPSNSQ S
Sbjct: 303 KSNSEVCVPMLNPDAGNRLSRPV-TDSLKAFTGSIVERTDNLQISPDKETINQPSNSQAS 362

Query: 362 KPVSRFKMQRRGV 375
           KPVSRFKMQRRGV
Sbjct: 363 KPVSRFKMQRRGV 363

[Close]

BLAST of Spo13701.1 vs. UniProtKB/TrEMBL
Match: A0A059DGM5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01831 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.700e-71
Identity = 187/389 (48.07%), Postives = 236/389 (60.67%), Query Frame = 1


		  
Query: 8   GTVTSLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRLPDELHHH 67
           GTVT L+S FPA+EA+KAA  V   I EKR ELD +R F ADN  L+NLVQ+LP+ELHH 
Sbjct: 7   GTVTPLASMFPADEAQKAAGRVQDAIAEKRRELDRVRGFAADNAALVNLVQKLPEELHHD 66

Query: 68  IQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHVDSVKAVI 127
           + VPFGKAAFFPGRL+HTNEF VLLGEGY+A+RT+KQTV+ILKRRG+ LE+HVDS+K++I
Sbjct: 67  VMVPFGKAAFFPGRLIHTNEFTVLLGEGYYAERTSKQTVEILKRRGKALETHVDSLKSII 126

Query: 128 KDLKAEASFFYRTAEEAAEGLVEIREELSDDEDSEGSQEKEDAASEPEVGIGSSAAVL-D 187
           +DLK EASFF +TA EAAEGLVEIREELS +E  EGS E       P +       +L +
Sbjct: 127 EDLKTEASFFDKTASEAAEGLVEIREELSGEESDEGSSELGQKEDAPSISAEDKGKILNE 186

Query: 188 DEEYARIMSRLDELEKEELEEEEEDEDTEDHRDVT------------NGEDFNNSEQSEV 247
           DEEY R+MS+LDELEKEEL  E  D   E+  +V             N +D   S     
Sbjct: 187 DEEYDRLMSKLDELEKEELAAEAADNIEEETNEVDPDVVSDQSSFHQNLKDLEGSHSCMP 246

Query: 248 QHHTK-------VLSDSISLPNDADKSIHTYLNLQPNHKDDCSRGKDILQKFVERPMEED 307
             H++        L  +   P   +K   +   +  + KD  S G D L   ++ P   D
Sbjct: 247 PSHSERQASNEEFLRQTRQQPTLVEKLNPSDFTIASSQKDKTSHGNDPLWN-LKGPNIAD 306

Query: 308 NVPSVVKTSFPSES-RSKSEVYVPAPKPEVGNQLSRQVKTDSLKAFTGSIIERTDNLQIS 367
             P +        +  S +EV +  PKP+V          DSL+AFTGSIIE + NL I+
Sbjct: 307 KSPKLPALEENDHAGSSNNEVPIQPPKPKV----------DSLRAFTGSIIEHSPNLPIN 366

Query: 368 PDREPINQPS---NSQPSKPVSRFKMQRR 373
           P  EP    S    SQ SKP+SRF+MQR+
Sbjct: 367 PG-EPSATSSKVPGSQSSKPLSRFRMQRK 383

[Close]

BLAST of Spo13701.1 vs. UniProtKB/TrEMBL
Match: A0A0D2NGY1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G019600 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.000e-70
Identity = 185/401 (46.13%), Postives = 238/401 (59.35%), Query Frame = 1


		  
Query: 1   MATARGKGTVTSLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRL 60
           M  +  KG VTSLSS FPAEE +KAA +V   ++EK++E++ L+ F+ADNT+LINLVQ+L
Sbjct: 1   MGKSEVKGMVTSLSSMFPAEEVQKAAKMVEEKLSEKQNEMNQLKEFIADNTSLINLVQKL 60

Query: 61  PDELHHHIQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHV 120
           PDELHH I VPFGKAAFFPGRL+HTNEFLVLLGE Y+ +RTAKQTV+ILKRRG++LES V
Sbjct: 61  PDELHHDIMVPFGKAAFFPGRLIHTNEFLVLLGESYYTERTAKQTVEILKRRGKSLESKV 120

Query: 121 DSVKAVIKDLKAEASFFYRTAEEAAEGLVEIREELSDDEDSEGSQEKEDAASEPEVG-IG 180
           D++KAV++DLKAEASFF  TA EAAEGLVEIRE   D+     SQ        P V    
Sbjct: 121 DALKAVMQDLKAEASFFDSTASEAAEGLVEIREYEEDNSTERASQSGSLELETPSVAEAD 180

Query: 181 SSAAVLDDEEYARIMSRLDELEKEELEEEEEDEDTEDHRDVTNG--EDFNNSEQSEVQHH 240
           +     +D+EY RIMSRL+ELEKEEL  E+ +E+ ED  +  N    D N  E ++   H
Sbjct: 181 NKMGASEDDEYERIMSRLEELEKEELAAEDNEENLEDEDEDANAVESDSNEDELTKAAFH 240

Query: 241 TKVLSDSISLPNDADKSIHTYLNLQPNHKDDCSR-------GKDILQKFVERPMEEDNVP 300
            K                ++YL+    + +  SR       GK+ +++  ++   +D   
Sbjct: 241 RK------------KDECYSYLDHGQRYSESQSRKQLQQFNGKEPIEEMSDKYKHQDLTN 300

Query: 301 SVVKTSFPSESRSKSE-----------------VYVPAPKPEVGNQLSRQVKTDSLKAFT 360
               T    E  +K E                 +   AP  +   Q S+  + DS KAFT
Sbjct: 301 QFASTGLTEEPVTKGEISHGRIIQQDTKTLSPSINASAPFEKKSVQTSK-TEFDSSKAFT 360

Query: 361 GSIIERTDNLQISP--DREPINQPSNSQPSKPVSRFKMQRR 373
           GSI+E T NL  S         Q S SQPSKPVSRFKMQR+
Sbjct: 361 GSIVEHTQNLDKSSVGTNTTSLQSSGSQPSKPVSRFKMQRK 388

[Close]

BLAST of Spo13701.1 vs. UniProtKB/TrEMBL
Match: A0A0B2R7H2_GLYSO (RNA polymerase II subunit 5-mediating protein like OS=Glycine soja GN=glysoja_046092 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 5.100e-70
Identity = 184/377 (48.81%), Postives = 244/377 (64.72%), Query Frame = 1


		  
Query: 7   KGTVTSLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRLPDELHH 66
           KG+VTSL+S FP EEA++AA  V  TI +K+SELD LR F  DN +LINLV +LP++L H
Sbjct: 7   KGSVTSLASLFPVEEAQRAAKRVEDTIADKQSELDRLRGFATDNNSLINLVHKLPEQLSH 66

Query: 67  HIQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHVDSVKAV 126
            I VPFGKAAFFPGRL+HTNEFLVLLGEGY+A+RT+KQTV+IL+RRG++L+S VDS++A 
Sbjct: 67  DIMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILQRRGKSLDSQVDSLEAN 126

Query: 127 IKDLKAEASFFYRTAEEAAEGLVEIREELSDDEDSEGSQEKEDAASEPEVGIGSSAAVLD 186
           IKDL+AEASFF  TA + AEGLVEIRE+  + + +EG + K     +    +G++ A  D
Sbjct: 127 IKDLEAEASFFNATASQVAEGLVEIREDYLEKDSNEG-EFKSGHPQQEAPNLGNATA--D 186

Query: 187 DEEYARIMSRLDELEKEELEEE------EEDEDTEDHRDVTNGEDFNNSEQSEVQHHTKV 246
           D EYAR+++ +DELEKEEL  E      + DE T D  D++  E  +N  Q+    H   
Sbjct: 187 DGEYARMLAIMDELEKEELAAESGNHSDQNDESTGDFHDISYREHIDNKLQNSKDVHQSE 246

Query: 247 LSDSISLPNDADKSIHTYLNLQPNHKDDCSRGKDILQKFVE-RPMEEDNVPSVVKTS--F 306
           L D I+     +K I   L  + N K+D +   +     VE R  E +N    +  S   
Sbjct: 247 LLDQIN-----NKIITADLPKKQNRKEDITDQLNFASLAVESRVKERENFVEYIDPSEKI 306

Query: 307 PSESRSKSEVYVPAPKPEVGNQLSRQVKTDSLKAFTGSIIERTDNLQISPDRE--PINQP 366
           P+ S+ +S     A K EV +Q S Q   DS KAFTGSIIE  +N++ +  ++    +Q 
Sbjct: 307 PARSKERSVQATTASKTEVRHQTS-QPSFDSRKAFTGSIIEHAENIKPTTRQQSSASSQD 366

Query: 367 SNSQPSKPVSRFKMQRR 373
           S SQ SKPVSRFKMQRR
Sbjct: 367 SGSQSSKPVSRFKMQRR 374

[Close]

BLAST of Spo13701.1 vs. ExPASy Swiss-Prot
Match: RMP_DICDI (RNA polymerase II subunit 5-mediating protein homolog OS=Dictyostelium discoideum GN=rmp PE=3 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 5.500e-17
Identity = 79/296 (26.69%), Postives = 146/296 (49.32%), Query Frame = 1


		  
Query: 35  EKRSELDNLRSFVADNTNLINLVQRLPDELHHHIQVPFGKAAFFPGRLVHTNEFLVLLGE 94
           E +  ++ L+S   D   LI+ +Q LPD L   I VP GK AFF G L +TNE L+LLG+
Sbjct: 16  EYQDHIEELKSTKNDYKQLIDTLQHLPDTLQPKIMVPMGKLAFFEGNLKNTNEILILLGD 75

Query: 95  GYFADRTAKQTVDILKRRGQTLESHVDSVKAVIKDLKAEASFFYRTA----EEAAEGLVE 154
            YFA R++KQT+DI++RR + +++ ++ ++  IK LK   S     +    E+  + +VE
Sbjct: 76  NYFAKRSSKQTIDIIQRRDKDIDTSINDLREQIKGLKQRVSMTTDLSKALHEKEYDNIVE 135

Query: 155 IREELSDDEDSEGSQEKEDAASEPEVGIGSSAAVLD--------------DEEYARIMSR 214
           I+EE + DE+ E  ++++    +      ++    D              DEE+ +++ R
Sbjct: 136 IKEEYNSDEEREKEKKRKQKPQKSTTTTTTTTTSKDKPKTEEEKKKSKEMDEEFDKMLKR 195

Query: 215 LDELEKEE------LEEEE--------------EDEDTEDHRDVTNGEDFNNSEQSEVQH 274
           L  LE++E       +EEE              ++E  +D+ +  N +D +N E  + ++
Sbjct: 196 LSILEEKENKMGDDYDEEEFNKKFNKKLDITGSDEEYDDDNYNNNNDDDDDNDEDDDREY 255

Query: 275 HTKVLSDSISLPNDADKSIHTYLNLQPNHKDDCSRGKDILQKFVERPMEEDNVPSV 293
           + +         ++  ++ +   N++ +  DD     D  ++ VE   E  N+  +
Sbjct: 256 YQEE-----GFEDEKPENSNYNKNIEEDDHDDDDDYYDEGEEIVEYYDENGNIVDI 306

[Close]

BLAST of Spo13701.1 vs. ExPASy Swiss-Prot
Match: RMP_BOVIN (Unconventional prefoldin RPB5 interactor OS=Bos taurus GN=URI1 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.100e-14
Identity = 72/237 (30.38%), Postives = 122/237 (51.48%), Query Frame = 1


		  
Query: 12  SLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRLPDELHHHIQVP 71
           S ++   A E  +  +     +   + ++ + +    D   L   +  LPD+L ++I VP
Sbjct: 12  SAAAPLRAPEVARLREEQEKVVTNCQEKIQHWKKVDNDYNALQERLSTLPDKLSYNIMVP 71

Query: 72  FGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHVDSVKAVIKDLK 131
           FG  AF PG+LVHTNE  VLLG+ +FA  +AKQ V +++ R + +   +D +K V+K+ +
Sbjct: 72  FGPFAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDLKKVMKNFE 131

Query: 132 AEASFF--YRTAEEAAEGLVEIREELSDDEDSEG---------SQEKEDAASEPEVGIG- 191
           +   F    +   +AA  +V+IREE+  D + +          S+ K     E E     
Sbjct: 132 SRVEFTEDLQKMSDAAGDIVDIREEIKTDFEFKAKHRIAHKPHSKPKTSDIFEAEFANDL 191

Query: 192 SSAAVLDDEEYARIMSRLDELEKEELEEEEEDEDTEDHRDVTNGEDFNNSEQSEVQH 237
            S  +L D+E   +  RL+ELE++E    E D D++    + NGED ++ E+ E Q+
Sbjct: 192 KSKDLLADKE---LWDRLEELERQEELLGEIDIDSKPDTVIANGEDVSSEEEKEDQN 245

[Close]

BLAST of Spo13701.1 vs. ExPASy Swiss-Prot
Match: RMP_MOUSE (Unconventional prefoldin RPB5 interactor OS=Mus musculus GN=Uri1 PE=1 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 9.700e-14
Identity = 68/233 (29.18%), Postives = 116/233 (49.79%), Query Frame = 1


		  
Query: 12  SLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRLPDELHHHIQVP 71
           S ++   A E  +  +     +   + ++ +      D + L   ++ LPD+L + + VP
Sbjct: 18  SAAAPLRAPEVARLREEQEKVVTNCQEKIQHWEKVDNDYSALQERLRTLPDKLSYDVMVP 77

Query: 72  FGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHVDSVKAVIKDLK 131
           FG  AF PG+LVHTNE  VLLG+ +FA  +AKQ V +++ R + +   +D  K V+K+ +
Sbjct: 78  FGPLAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDFKKVLKNFE 137

Query: 132 AEASFF--YRTAEEAAEGLVEIREELSDDEDSEGSQ-------EKEDAASEPEVGIGSSA 191
           +   F    +   +AA   V+IREE+  D + +G Q        K   +   E    +  
Sbjct: 138 SRVEFTEDLQKMSDAAGDFVDIREEIKSDFEFKGKQRIAHKPHSKPKTSDIFEADFENGV 197

Query: 192 AVLDDEEYARIMSRLDELEKEE--LEEEEEDEDTEDHRDVTNGEDFNNSEQSE 234
              +  +   + +RL+ELE++E  L E E   DT     + NGED  +SE+ +
Sbjct: 198 KPKNTFDADELWARLEELERQEELLGELESKPDTV----IANGEDRVSSEEEK 246

[Close]

BLAST of Spo13701.1 vs. ExPASy Swiss-Prot
Match: RMP_HUMAN (Unconventional prefoldin RPB5 interactor 1 OS=Homo sapiens GN=URI1 PE=1 SV=3)

HSP 1 Score: 79.3 bits (194), Expect = 9.700e-14
Identity = 68/204 (33.33%), Postives = 112/204 (54.90%), Query Frame = 1


		  
Query: 49  DNTNLINLVQRLPDELHHHIQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDI 108
           D   L   +  LPD+L ++I VPFG  AF PG+LVHTNE  VLLG+ +FA  +AKQ V +
Sbjct: 57  DYNALRERLSTLPDKLSYNIMVPFGPFAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAVGL 116

Query: 109 LKRRGQTLESHVDSVKAVIKDLKAEASFF--YRTAEEAAEGLVEIREELSDDEDSEG--- 168
           ++ R + +   +D +K V+K+ ++   F    +   +AA  +V+IREE+  D + +    
Sbjct: 117 VEHRKEHVRKTIDDLKKVMKNFESRVEFTEDLQKMSDAAGDIVDIREEIKCDFEFKAKHR 176

Query: 169 ------SQEKEDAASEPEVGIG-SSAAVLDDEEYARIMSRLDELEKEELEEEEEDEDTED 228
                 S+ K     E ++     S  +L D+E   + +RL+ELE++  EE   + D++ 
Sbjct: 177 IAHKPHSKPKTSDIFEADIANDVKSKDLLADKE---LWARLEELERQ--EELLGELDSKP 236

Query: 229 HRDVTNGEDFNNSEQSEVQHHTKV 241
              + NGED  +SE+ +   +T V
Sbjct: 237 DTVIANGEDTTSSEEEKEDRNTNV 255

[Close]

BLAST of Spo13701.1 vs. TAIR (Arabidopsis)
Match: AT1G03760.1 (Prefoldin chaperone subunit family protein)

HSP 1 Score: 211.5 bits (537), Expect = 9.200e-55
Identity = 170/408 (41.67%), Postives = 227/408 (55.64%), Query Frame = 1


		  
Query: 7   KGTVTSLSSTFPAEEARKAADLVNHTINEKRSELDNLRSFVADNTNLINLVQRLPDELHH 66
           KGTVT L   F  E+ RKAA  +   I EKR E++ L+ +V +N NLINLV++LPD+LHH
Sbjct: 6   KGTVTPLG--FSEEDVRKAASYMEEKIGEKRVEMNRLQQYVDENDNLINLVKKLPDQLHH 65

Query: 67  HIQVPFGKAAFFPGRLVHTNEFLVLLGEGYFADRTAKQTVDILKRRGQTLESHVDSVKAV 126
           ++ VPFGK AFFPGRL+HTNE LVLLGE Y+ DR++KQTVD LKRR +TL+S + S+KA 
Sbjct: 66  NVMVPFGKMAFFPGRLIHTNECLVLLGENYYTDRSSKQTVDFLKRRDKTLQSQIHSLKAE 125

Query: 127 IKDLKAEASFFYRTAEEAAEGLVEIREELSDDEDSEG----SQEKEDA-ASEPEVGIGSS 186
           I+DL+ EASFF  TA E A+GLVEIREE  +++ S      S EKE    SE E   G  
Sbjct: 126 IEDLQTEASFFTTTASEVADGLVEIREEYVEEDSSAPVVIHSSEKEPCNLSEGETEEGE- 185

Query: 187 AAVLDDEEYARIMSRLDELE-KEELEEEEEDEDTED-----------HRDVTNGEDFNNS 246
              L+D+++ARIM+RL+ELE +EELE E+ D   ED             D+  G     +
Sbjct: 186 ---LEDDDFARIMARLNELEIEEELEGEDGDSRGEDPDSSVESVEQIQHDLVKGSR-GET 245

Query: 247 EQSEVQHHTKVLSDSISLPNDAD---------------KSIHTYLNLQPNHKD---DCSR 306
           ++  V++  +    +IS+PN A                K I       P HKD     +R
Sbjct: 246 DRGRVEYGKQ--ETTISVPNKASGHSSSPRVSEPRVEAKIIQVLPETHP-HKDLDDPLNR 305

Query: 307 GKDILQKFVERPMEEDNVPSV-VKTSFPSESRSKSEVYVPA------PKPEVGNQLSRQV 366
            + + Q   +        P    +T     + +K+ V  P       P+PE         
Sbjct: 306 IRPMAQYLSKEGQSRGGTPQQNAETWKDFRTNAKTNVLGPQKIEPQKPEPEF-------- 365

Query: 367 KTDSLKAFTGSIIERTDNLQISPDREPINQPSNSQPSKPVSRFKMQRR 373
             DS KAFTGSI+E    L+ S   +   Q S SQPSKPVSRF+ +RR
Sbjct: 366 --DSTKAFTGSIVEHAHILETSAHSQ--TQSSTSQPSKPVSRFRAKRR 391

The following BLAST results are available for this feature:

BLAST of Spo13701.1 vs. NCBI nr
BLAST of Spo13701.1 vs. UniProtKB/TrEMBL
BLAST of Spo13701.1 vs. ExPASy Swiss-Prot
BLAST of Spo13701.1 vs. TAIR (Arabidopsis)

BLAST of Spo13701.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902230678\|gb\|KNA21947.1\|	1.3e-199	100.	hypothetical protein SOVF_0381...	[more]
gi\|731366733\|ref\|XP_010695229.1\|	1.8e-132	74.2	PREDICTED: RNA polymerase II s...	[more]
gi\|657979282\|ref\|XP_008381601.1\|	6.0e-72	48.0	PREDICTED: RNA polymerase II s...	[more]
gi\|702244929\|ref\|XP_010052068.1\|	3.9e-71	48.0	PREDICTED: RNA polymerase II s...	[more]
gi\|823130098\|ref\|XP_012451923.1\|	4.3e-70	46.1	PREDICTED: RNA polymerase II s...	[more]

BLAST of Spo13701.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RSY9_SPIOL	8.9e-200	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B922_BETVU	1.2e-132	74.2	Uncharacterized protein OS=Bet...	[more]
A0A059DGM5_EUCGR	2.7e-71	48.0	Uncharacterized protein OS=Euc...	[more]
A0A0D2NGY1_GOSRA	3.0e-70	46.1	Uncharacterized protein OS=Gos...	[more]
A0A0B2R7H2_GLYSO	5.1e-70	48.8	RNA polymerase II subunit 5-me...	[more]

BLAST of Spo13701.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 4


Match Name	E-value	Identity	Description
RMP_DICDI	5.5e-17	26.6	RNA polymerase II subunit 5-me...	[more]
RMP_BOVIN	1.1e-14	30.3	Unconventional prefoldin RPB5 ...	[more]
RMP_MOUSE	9.7e-14	29.1	Unconventional prefoldin RPB5 ...	[more]
RMP_HUMAN	9.7e-14	33.3	Unconventional prefoldin RPB5 ...	[more]

BLAST of Spo13701.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G03760.1	9.2e-55	41.6	Prefoldin chaperone subunit fa...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004127	Prefoldin alpha-like	PFAM	PF02996	Prefoldin	coord: 31..144 score: 2.3
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 29..137 score: 3.0
IPR009053	Prefoldin	unknown	SSF46579	Prefoldin	coord: 30..143 score: 5.23
None	No IPR available	unknown	Coil	Coil	coord: 190..217 score: -coord: 138..158 scor
None	No IPR available	PANTHER	PTHR15111	RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3	coord: 2..278 score: 6.5

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0051082	unfolded protein binding