Spo13783.1 (mRNA) | SpinachBase

Overview


Name	Spo13783.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Family of unknown function (DUF662)
Location	chr5 : 42387002 .. 42392754 (-)
Sequence length	1794

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTGAGTGACGACGACATTGAGTCACTAGGGATTGGAGACACATGGTCCTCTCTAGGGGAAGCTGGTGAGATGTGCGATGTATCACGTTGGTCCAGCAATATTGGGCTTGGCGAGGGATGGCAACGCGAGGGATGTATAGGCACGGGCTGTGTAGGTGAGGGAGAATGCAAGGGATTGTTAGGTAAGCTCTCGTTAGGCGAAGGATGGCTGCGTAATGGTGCTTGCAGAAGAGGCCGCGACAGGGCATATTTTGCCACAGAAAGGCTACGACTTGCTGATTTTGGTGCGAATAGGCAGTGTAGTTCACTGGCTGGTCGTGGCAGAGGTATCTGTGCCACGGTCTGGTCGCGGGGAGGGATGATCCGTTACAAAGCTAGGCGGGGCGGGTATATGTGATGCAAGGGTAACGCTAGACGGTACTTGGGCGACACCATTGGACAAAGATGATGGTAATAGGAGGAGTGAGGGATCCGTGTCACTATAATTGACCGACGATGAAGGACGAGACGACACTAAATTTCTATACGGGAATACTGACTCATGAAAGTTTATATTCTGACTCACATAAACACGACCACTTTGGTTCATAACAACGACAACCATTATAACCCAGAGCATACCCAATAAAACACATTGAACTGACCTTGGAGTTAACTTATTTGACGGTTTCGCAATCAAATTTGGAAAACACTCACAACCAAACCCACTTAAAAACGAATAATCCGGTTGTTTTGAAAATAAATTTTGAAAAGGAGACGCACCTTGCAAAACTGGGGTAGGCAATCGATTAATTATATATGTTTCCGTATACGCAACATATACACATAATTGACCAGGAAGCAATGACTCAATAAGCATCGTTCGAGCTAGTTCAATTACATGTCTATGCTTTCGTTTAGCAACACCATTTTGTTGTTGAGTGTCTGGGCAAGATTTTCTAAACGATATTCCCCATTTTCGAAAATGATCAAGCAAAGGAGCATTACCAAATTCCCGACACCCGTCACTTTGGTAATATTTAATTTGGCAATCAAACAAATTCTCAACTAATTTTTGAAAATCCATAAAGCGCCTTGAGGTTGAAAATCCATAGTTAGTCGATGACTATGCGCTAATCTCCCTGCAAGTGGGAATTTGGACCACCATAAGTATTCCCACGAGGTCTAGAAATATTCGAGGTAGTGAAAAAAAATCCAACCCACCGATTCCAACGTAATTTTTGGAAATGTGAAGTTGCTAGGCAATATCAGGTGTCGTACCAATTTGAGTTGAAGCGACATCGAAGAGACGACATGGAGCCGGATGCGCGCGTAGGTTGCCACGTGAAAGTCGTGGTATATGGCGGAGCACCAATAGAGGTGACACAGAACATAGGTGCGCCGACTGTGTGTTGCGGCTGCGATCCCAATGGATTTGAGGACGTATGCGTCAAAGAGGTTGTCCCCTGTGCTGGGGTATATGGTATGTGTTATGAAATTGGCGATGGAGAAGTGGATTCCATAAATGTAAACAAGGCCGTCAATGAAGCAACATAATCAATTAATTCAGAGTTTGAGTATGCGGAGAGACGGGAAAAAAAAACTGATCATTGAGTTAATGGGATGGAATTTTACGTGATATGAAGGAGAATCAAATTAATTTTCGTAAGGGTTATAAAGGAAATCTAATACTCTTAATAACATGTGAATATAATGATACGGCCCTAATACAGGTGCCTGAGACTCATATGTATAATAATATCGTACATTAGTACGATTACGAATATATCCTTAGTATCCTCTATTACAAATTAACAACACCTAATATTAAAGACAATGAATTTTTAGTGTCGTGAGAACCGAACCACTCAGCACACTGCTGGATTTTGCAACGATTAGAAGATGTGAAGCTCTTCCATTCTATTAGGTTATTTTTTTCAAAATTTAATGCTACAATATCTAAACCCTATTGTATTAAAGAAAAACAATAAATAAATCTTTCTTTTTCCTTTTTGGAGAGAGGTTGAGGGTGGTTGATCATTCATAATCAAATAAACTCCAACCCAAAACACAATAAAACAATTTTTTATTCCAAAAACAAGGTGGCATTCACAATACTTTTCAAACTTTTTTTTATCCCTTTTTTTTTACATACTTTTAGTCTTTAAAGACCCCTCATCCTCACCCACATTTCATTCCCACTATTTACCCAACTTTGTTTAAACGGATCACCAAACAGGGCACAAACTCAAAATACAAAAACCCTCTTTCCTCTCTCCTCACTTTCTCTCTCTAGCCAAAAAAAAAAAAAGTAAAAGGCAACCCACCAAAAAAAGATAAAGTGGAGAATTCAAGGACAGACGGAGGCTTCCTCTGTGGTCTCTGCCCAGGAGAGAGAAACAGAAACAAGCTGAAGAGAGAGAAAAATAAAGCCGTTGAGAAGAACCTTCAACCACCACCGCCACAACAACCACTACAGACGATGCAGAAGTCTGAACAGCCGCCGCCTGCGCCACCACTTCCGACGATACAAAGCGTCGCGAATTCTGGCAGCTTGAGCTTCAACAGTAGTATTAATTCTACTGCTGGTGTTGGTATGCAAGATGAAGAGATCACTCGCTCTGCTTTGTCGAACTTCAGGGCGAAAGAGGAGGAGATCGAGAGGAAGAAGATGGAGGTGCGAGAGCGAGTTCAAGCTCAACTCGGCCGAGTTGAAGAGGAGACTAAACGCTTGGGCTTAATTCGTGAGGTTTACTCTCTTCTCACTTTCTCTCCTCTTTTGATTGTTTTTTCCATTTTTAGTATTTTTTTTGGGTGTTTGAAGTAATAAATCTACTTACTTTTGTGCTTAATTTTTCTGTTTTTTTTCACTTTTTGCTTAGTTTTAGTTTTAGTTTCTGAAACTTGGGGTTTTTCCCCCAAAAAATGAAAAATAAATGGGTATATAATTAAAAATTTGAAAATCCCTTGTAACGGTCATATGCATCTAGTAACTTTTCAAATTTGGCTAACCCAGATTTAATTTCTCTATTTTTCACATTTTTGGCTTGATTTTTAATTATTTTAGTTGGGGTTTTCCCCCAAATAAATAAAAAAATTAAATGGGTATAACTTGAAATTTGAAATTCCCTTGTAACGGTCTTATGATTCTAGTAATTTTTCAAATATTCGGTGTAATTCTTTCCATTTATTGCCTGTAAATTACTAACATTGCATATATGGCAAAATGACAAACCCATATTTTGGTTTTCTATGCTTTATTTTCCCCTACTTTTTTGGGCTTAATTTTTGTTTCTTTACTTTTGTTTTTGTTAATGAAAATTGAAAACCCCCATCTTAAAATTTGAGAATTCTTGAGTTTTCGTATGTGTATTGAGATGTAATTTGCTTGATCTGTTCACTATGTTACTCATGACTCGTGATTGACGGATACTCGATGCGTGGAAGTTGGAAACGGTTATGGCACTTGGACACTTCATTTAGACGGCCGTGTCTGACATTTGTAGAGTTGTAGCCGTTTATAAGTAACACATTAAGTCAACATTAGTTATGAACACAGAGTCAACATTAAGTTTTTGTTTCATGGAATAAGTGTTTTAGTACCTTGTTAATTGAAATTAAGTAGGAAATAAACGAAATTTGAGGGATCTTTATTTTGTTCAAGAATTATTGGATTCTGTTAACTTGTGAACACAGAGCAGTTTGAATTAGGTAGAAAGGTGTAATTCTTCTTTTTTCCGTTGGGATTTTCTTTTTTCTTTCATATTCTATATATCTGCAACTTGTTACCGTTGTAGATAATTGACACTTGACAGATTGTCCTTTAGCTAATATCAACGTCCAGCTGACAAACTTTTTCTTTTAGCTGGAATGTGAGCTAAGTGTCTGTGAGAGTGTGTTTCTTGTGTTTTCTACCTGGGTAGTTGAGAAGTGAAGTACTGGTAATAAACTATTTTTGGATATCATCCTTGTTCCTACTCCGTAGTAGGAAATGCACAACAATTTAGTTCAAGACATGATTGAACTCTGGCTATTTTTGGCTATTATTAGGATTTCTAAGAGTTATAACTTGTTTTGCCCCGTTGTATTAAGAAGTAAGATGGTGGTTAATCAACTTGTTGAATTCTTTATTATTTCTGTATATGTCACTGTTACTAATCTCACTTACCAGTATTGTGCAATAATAGTCGGGACGTCTAGCCTAATATGTTGGGTGTGTATTTTACCAATTTGAATAATTTGGTAGTTGTTTCGTCCCGTAATTCCTCACTGAGAGGATAAGAGGGTGAGTGGAGACAAAACGAAAAGGATAGTTTTGTGAGTCAACTGTAATACTGTTGAGGGTGCATACTTTTGATAGTAGCGTGAAAATCTTTTAATTTATAATGTTTATATCACCTTTCATCCTCGGTTGCGAATGGATCTTGAAGTGTCTTATTTCGCCTTGTTTTAATGTGGATTTAACAGTTTACAACTAAAACTTAGAAGCTGTAGCACTTAATATTTTGGTTTTGTGCTTTTGTATACTCATTTCAGTTGTTGTAAATACGTTTACATTTTATGAACCTGCAGGAGCTTGAATCCCTTGCTGATCCAATGCGGAAAGATGTGTCTGTTGTGCGTAAAAGGATAGATGTAGTTAACAAAGAGCTAAGGCCACTCGGAACAAATGTGCAAAAGAAGGTACATATTCTACTAACAACGTTTTACGACTTCTAAAATTTTTAAGATTTTACAATTCCCTCTGGTGAATACGTTTTCATTTCGATTTTACTATTACATGTATTTCCGGAAAAATAGACAAATGATTTAGAATTATTGAGTTAAAATGATTTGATTATTGAAATAACTGCGAGTTAATATGTATCAATGGGGCTCTGGCCTTGAAACCTATTTTGACAGGAAAAAGAATACCGAGATGCGCTGGATGCATTCAATGAGAAGAACAAAGAAAAAGTACAGCTGATAAACAAACTAGTTGAGGTAAAATGATTCCCTGGCTACTACATGAATGAGTAATGAAAATTTGAGATTATATTATATCGAAACTTAACATTTGTTCCTTTCTTGGATGGATGGGAGCAGCTGGTAGGCGAAAGCGAGAGGTTGAGGATGAAGAAACTGGAAGAGTTGAGCAAGAGTGTGGAATCGTTGCACTAAATGACTTGAACAGATGAACTTGTCCATAGATAATTGAATTAGGTTTGTGTGATGTAATTTAATTTCAACGCTTTAATTTTTTTTGCCCCCTTTTCTTAATGTATTTATATATATGGGTGCCTGGAGTTTGGTGTATTCTGTGTACCCTTTTTTATTTTTATTTCTTTTATTTTTATTTTTATTTTTATTTTTGTTTCCCTCCCCAATTTGATTAGATCTTGATGCAATATCTGCTGATCTAGGAATAGGGTAATATCTACCCCAAATAGACAGGTTTGTAACTCGTAACATTTTCCGGACTTAATTTCGCCTCATCTTTCGTTTCCTATCATTTTCGTAAATCGCTTAATTGCTTGTTTTGTTTGTCACTCACTCTACTTGTAAATTCCCTACTATATAGGGCGGTAAGTTGGGAAATAAAAGGCGGACCAAATGAGCAACTTCTTTAGTAGACCAAATAATTGCATTTTGTCATGTGCACATCAATTATACTATGTTAAAGCTTTTTTCATTCATGACTTCCAACGGTGTGAAAGGCGATCAATCAATTTCAGTCTCTCTTTTACAGTGGAAGTGAGTTGGCTTGGGATCCGTTTTTTTAGTAACCCC

mRNA sequence

ATGGACTTGAGTGACGACGACATTGAGTCACTAGGGATTGGAGACACATGGTCCTCTCTAGGGGAAGCTGGTGAGATGTGCGATGTATCACGTTGGTCCAGCAATATTGGGCTTGGCGAGGGATGGCAACGCGAGGGATGTATAGGCACGGGCTGTGTAGGTGAGGGAGAATGCAAGGGATTGTTAGGTAAGCTCTCGTTAGGCGAAGGATGGCTGCGTAATGGTGCTTGCAGAAGAGGCCGCGACAGGGCATATTTTGCCACAGAAAGGCTACGACTTGCTGATTTTGGTGCGAATAGGCAGTGTAGTTCACTGGCTGGTCGTGGCAGAGTTGCTAGGCAATATCAGGTGTCGTACCAATTTGAGTTGAAGCGACATCGAAGAGACGACATGGAGCCGGATGCGCGCGTAGGTTGCCACGTGAAAGTCGTGGTATATGGCGGAGCACCAATAGAGGTGACACAGAACATAGGTGCGCCGACTGTGTGTTGCGGCTGCGATCCCAATGGATTTGAGGACGTATGCGTCAAAGAGGTTGTCCCCTGTGCTGGGGTATATGGAGAGAGAAACAGAAACAAGCTGAAGAGAGAGAAAAATAAAGCCGTTGAGAAGAACCTTCAACCACCACCGCCACAACAACCACTACAGACGATGCAGAAGTCTGAACAGCCGCCGCCTGCGCCACCACTTCCGACGATACAAAGCGTCGCGAATTCTGGCAGCTTGAGCTTCAACAGTAGTATTAATTCTACTGCTGGTGTTGGTATGCAAGATGAAGAGATCACTCGCTCTGCTTTGTCGAACTTCAGGGCGAAAGAGGAGGAGATCGAGAGGAAGAAGATGGAGGTGCGAGAGCGAGTTCAAGCTCAACTCGGCCGAGTTGAAGAGGAGACTAAACGCTTGGGCTTAATTCGTGAGGAGCTTGAATCCCTTGCTGATCCAATGCGGAAAGATGTGTCTGTTGTGCGTAAAAGGATAGATGTAGTTAACAAAGAGCTAAGGCCACTCGGAACAAATGTGCAAAAGAAGGAAAAAGAATACCGAGATGCGCTGGATGCATTCAATGAGAAGAACAAAGAAAAAGTACAGCTGATAAACAAACTAGTTGAGCTGGTAGGCGAAAGCGAGAGGTTGAGGATGAAGAAACTGGAAGAGTTGAGCAAGAGTGTGGAATCGTTGCACTAAATGACTTGAACAGATGAACTTGTCCATAGATAATTGAATTAGGTTTGTGTGATGTAATTTAATTTCAACGCTTTAATTTTTTTTGCCCCCTTTTCTTAATGTATTTATATATATGGGTGCCTGGAGTTTGGTGTATTCTGTGTACCCTTTTTTATTTTTATTTCTTTTATTTTTATTTTTATTTTTATTTTTGTTTCCCTCCCCAATTTGATTAGATCTTGATGCAATATCTGCTGATCTAGGAATAGGGTAATATCTACCCCAAATAGACAGGTTTGTAACTCGTAACATTTTCCGGACTTAATTTCGCCTCATCTTTCGTTTCCTATCATTTTCGTAAATCGCTTAATTGCTTGTTTTGTTTGTCACTCACTCTACTTGTAAATTCCCTACTATATAGGGCGGTAAGTTGGGAAATAAAAGGCGGACCAAATGAGCAACTTCTTTAGTAGACCAAATAATTGCATTTTGTCATGTGCACATCAATTATACTATGTTAAAGCTTTTTTCATTCATGACTTCCAACGGTGTGAAAGGCGATCAATCAATTTCAGTCTCTCTTTTACAGTGGAAGTGAGTTGGCTTGGGATCCGTTTTTTTAGTAACCCC

Coding sequence (CDS)

ATGGACTTGAGTGACGACGACATTGAGTCACTAGGGATTGGAGACACATGGTCCTCTCTAGGGGAAGCTGGTGAGATGTGCGATGTATCACGTTGGTCCAGCAATATTGGGCTTGGCGAGGGATGGCAACGCGAGGGATGTATAGGCACGGGCTGTGTAGGTGAGGGAGAATGCAAGGGATTGTTAGGTAAGCTCTCGTTAGGCGAAGGATGGCTGCGTAATGGTGCTTGCAGAAGAGGCCGCGACAGGGCATATTTTGCCACAGAAAGGCTACGACTTGCTGATTTTGGTGCGAATAGGCAGTGTAGTTCACTGGCTGGTCGTGGCAGAGTTGCTAGGCAATATCAGGTGTCGTACCAATTTGAGTTGAAGCGACATCGAAGAGACGACATGGAGCCGGATGCGCGCGTAGGTTGCCACGTGAAAGTCGTGGTATATGGCGGAGCACCAATAGAGGTGACACAGAACATAGGTGCGCCGACTGTGTGTTGCGGCTGCGATCCCAATGGATTTGAGGACGTATGCGTCAAAGAGGTTGTCCCCTGTGCTGGGGTATATGGAGAGAGAAACAGAAACAAGCTGAAGAGAGAGAAAAATAAAGCCGTTGAGAAGAACCTTCAACCACCACCGCCACAACAACCACTACAGACGATGCAGAAGTCTGAACAGCCGCCGCCTGCGCCACCACTTCCGACGATACAAAGCGTCGCGAATTCTGGCAGCTTGAGCTTCAACAGTAGTATTAATTCTACTGCTGGTGTTGGTATGCAAGATGAAGAGATCACTCGCTCTGCTTTGTCGAACTTCAGGGCGAAAGAGGAGGAGATCGAGAGGAAGAAGATGGAGGTGCGAGAGCGAGTTCAAGCTCAACTCGGCCGAGTTGAAGAGGAGACTAAACGCTTGGGCTTAATTCGTGAGGAGCTTGAATCCCTTGCTGATCCAATGCGGAAAGATGTGTCTGTTGTGCGTAAAAGGATAGATGTAGTTAACAAAGAGCTAAGGCCACTCGGAACAAATGTGCAAAAGAAGGAAAAAGAATACCGAGATGCGCTGGATGCATTCAATGAGAAGAACAAAGAAAAAGTACAGCTGATAAACAAACTAGTTGAGCTGGTAGGCGAAAGCGAGAGGTTGAGGATGAAGAAACTGGAAGAGTTGAGCAAGAGTGTGGAATCGTTGCACTAA

Protein sequence

MDLSDDDIESLGIGDTWSSLGEAGEMCDVSRWSSNIGLGEGWQREGCIGTGCVGEGECKGLLGKLSLGEGWLRNGACRRGRDRAYFATERLRLADFGANRQCSSLAGRGRVARQYQVSYQFELKRHRRDDMEPDARVGCHVKVVVYGGAPIEVTQNIGAPTVCCGCDPNGFEDVCVKEVVPCAGVYGERNRNKLKREKNKAVEKNLQPPPPQQPLQTMQKSEQPPPAPPLPTIQSVANSGSLSFNSSINSTAGVGMQDEEITRSALSNFRAKEEEIERKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKELRPLGTNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVESLH

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo13783	Spo13783	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo13783.1	Spo13783.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13783.1.CDS.6	Spo13783.1.CDS.6	CDS
Spo13783.1.CDS.5	Spo13783.1.CDS.5	CDS
Spo13783.1.CDS.4	Spo13783.1.CDS.4	CDS
Spo13783.1.CDS.3	Spo13783.1.CDS.3	CDS
Spo13783.1.CDS.2	Spo13783.1.CDS.2	CDS
Spo13783.1.CDS.1	Spo13783.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13783.1.utr3p.1	Spo13783.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13783.1.exon.6	Spo13783.1.exon.6	exon
Spo13783.1.exon.5	Spo13783.1.exon.5	exon
Spo13783.1.exon.4	Spo13783.1.exon.4	exon
Spo13783.1.exon.3	Spo13783.1.exon.3	exon
Spo13783.1.exon.2	Spo13783.1.exon.2	exon
Spo13783.1.exon.1	Spo13783.1.exon.1	exon

Homology

[Close]

BLAST of Spo13783.1 vs. NCBI nr
Match: gi|902205281|gb|KNA15136.1| (hypothetical protein SOVF_100960 [Spinacia oleracea])

HSP 1 Score: 312.0 bits (798), Expect = 1.500e-81
Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 1


		  
Query: 218 MQKSEQPPP-APPLPTIQSVANSGSLSFNSSINSTAGVGMQDEEITRSALSNFRAKEEEI 277
           MQKSEQPPP APPLPTIQSVANSGSLSFNSSINSTAGVGMQDEEITRSALSNFRAKEEEI
Sbjct: 1   MQKSEQPPPPAPPLPTIQSVANSGSLSFNSSINSTAGVGMQDEEITRSALSNFRAKEEEI 60

Query: 278 ERKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKELRPL 337
           ERKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKELRPL
Sbjct: 61  ERKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKELRPL 120

Query: 338 GTNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVESLH 395
           GTNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVESLH
Sbjct: 121 GTNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVESLH 178

[Close]

BLAST of Spo13783.1 vs. NCBI nr
Match: gi|731345311|ref|XP_010683857.1| (PREDICTED: uncharacterized protein LOC104898467 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 266.2 bits (679), Expect = 9.400e-68
Identity = 153/181 (84.53%), Postives = 164/181 (90.61%), Query Frame = 1


		  
Query: 215 LQTMQKSEQPPPAPPLPTIQSVANSGSLSFNSSINSTAGVGMQ--DEEITRSALSNFRAK 274
           +Q +QK EQ  P     T+Q+V NSGSLSFNSSINST+GV +   DEEITRSALSNF+AK
Sbjct: 2   MQNVQKPEQATPT----TLQNVVNSGSLSFNSSINSTSGVNVNVGDEEITRSALSNFKAK 61

Query: 275 EEEIERKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKE 334
           EEEIERKKMEVRERVQ QLGRVEEETKRL LIREELE +ADPMRKDVSVVRKRIDVVNKE
Sbjct: 62  EEEIERKKMEVRERVQLQLGRVEEETKRLALIREELEGMADPMRKDVSVVRKRIDVVNKE 121

Query: 335 LRPLGTNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVES 394
           LRPLGTNVQKKEKEY+DALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKS+ES
Sbjct: 122 LRPLGTNVQKKEKEYKDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSIES 178

[Close]

BLAST of Spo13783.1 vs. NCBI nr
Match: gi|566175755|ref|XP_006381309.1| (hypothetical protein POPTR_0006s11650g [Populus trichocarpa])

HSP 1 Score: 219.5 bits (558), Expect = 1.000e-53
Identity = 127/177 (71.75%), Postives = 151/177 (85.31%), Query Frame = 1


		  
Query: 218 MQKSEQPPPAPPLPTIQSVANSGSLSFNSSINSTAGVGMQDEEITRSALSNFRAKEEEIE 277
           MQK EQ P      T+Q   NSGSLSF+S ++       +DEE++RSALS FRAKEEEIE
Sbjct: 1   MQKMEQQPQQQNQLTVQ---NSGSLSFSSQMSK------EDEEMSRSALSTFRAKEEEIE 60

Query: 278 RKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKELRPLG 337
           +KKMEVRE+VQAQLGRVEEETKRL +IREELE+LADPMRK+V+VVRK+ID VNKEL+PLG
Sbjct: 61  KKKMEVREKVQAQLGRVEEETKRLAMIREELEALADPMRKEVAVVRKKIDTVNKELKPLG 120

Query: 338 TNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVESLH 395
             VQKKEKEY+DAL+AFN+KNKEKVQLI KL+ELV ESERLR+KKLEELSK+++S+H
Sbjct: 121 HTVQKKEKEYKDALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDSMH 168

[Close]

BLAST of Spo13783.1 vs. NCBI nr
Match: gi|470134352|ref|XP_004303018.1| (PREDICTED: structural maintenance of chromosomes protein 1A-like isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 216.5 bits (550), Expect = 8.500e-53
Identity = 122/182 (67.03%), Postives = 154/182 (84.62%), Query Frame = 1


		  
Query: 215 LQTMQKSEQPPPAPPLPTIQSVA---NSGSLSFNSSINSTAGVGMQDEEITRSALSNFRA 274
           +Q+++++  PPP  P P    +A   ++GSLSFNS+++       +DEE++RSALS FRA
Sbjct: 10  MQSIEQAPPPPPTAPAPPQHQLAVQNSAGSLSFNSNLSK------EDEEMSRSALSTFRA 69

Query: 275 KEEEIERKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNK 334
           KEEEIERKKMEVRE+VQAQLGRVEEETKRL  IREELE L+DPMRK+VS VRK+ID VNK
Sbjct: 70  KEEEIERKKMEVREKVQAQLGRVEEETKRLATIREELEGLSDPMRKEVSAVRKKIDTVNK 129

Query: 335 ELRPLGTNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVE 394
           EL+PLG + QKKE+EY++AL+AFNEKN+EKVQLI KL+ELVGESE++RMKKLEELSK+V+
Sbjct: 130 ELKPLGQSCQKKEREYKEALEAFNEKNREKVQLITKLMELVGESEKMRMKKLEELSKNVD 185

[Close]

BLAST of Spo13783.1 vs. NCBI nr
Match: gi|1009167159|ref|XP_015901969.1| (PREDICTED: reticulocyte-binding protein 2 homolog a-like [Ziziphus jujuba])

HSP 1 Score: 214.9 bits (546), Expect = 2.500e-52
Identity = 124/181 (68.51%), Postives = 152/181 (83.98%), Query Frame = 1


		  
Query: 215 LQTMQKSEQPPPAPPLPTIQ-SVANSGSLSFNSSINSTAGVGMQDEEITRSALSNFRAKE 274
           +QT ++ +Q  P       Q  V NSGSLSFNS+++       +DEE++RSALS FRAKE
Sbjct: 2   MQTYEQGQQQQPQQQQQQQQLMVQNSGSLSFNSNLSK------EDEEMSRSALSTFRAKE 61

Query: 275 EEIERKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKEL 334
           EEIERKKMEVRE+VQAQLGRVEEETKRL +IREELE+LADPMRK+V++VRK+ID VNKEL
Sbjct: 62  EEIERKKMEVREKVQAQLGRVEEETKRLAVIREELEALADPMRKEVALVRKKIDTVNKEL 121

Query: 335 RPLGTNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVESL 394
           +PLG   QKKE+EY++AL+AFNEKNKEKVQLI KL+ELV ESERLR+KKLEELSK+++S+
Sbjct: 122 KPLGHTCQKKEREYKEALEAFNEKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDSI 176

[Close]

BLAST of Spo13783.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6K5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_100960 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.000e-81
Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 1


		  
Query: 218 MQKSEQPPP-APPLPTIQSVANSGSLSFNSSINSTAGVGMQDEEITRSALSNFRAKEEEI 277
           MQKSEQPPP APPLPTIQSVANSGSLSFNSSINSTAGVGMQDEEITRSALSNFRAKEEEI
Sbjct: 1   MQKSEQPPPPAPPLPTIQSVANSGSLSFNSSINSTAGVGMQDEEITRSALSNFRAKEEEI 60

Query: 278 ERKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKELRPL 337
           ERKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKELRPL
Sbjct: 61  ERKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKELRPL 120

Query: 338 GTNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVESLH 395
           GTNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVESLH
Sbjct: 121 GTNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVESLH 178

[Close]

BLAST of Spo13783.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C1Y9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g160060 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 6.500e-68
Identity = 153/181 (84.53%), Postives = 164/181 (90.61%), Query Frame = 1


		  
Query: 215 LQTMQKSEQPPPAPPLPTIQSVANSGSLSFNSSINSTAGVGMQ--DEEITRSALSNFRAK 274
           +Q +QK EQ  P     T+Q+V NSGSLSFNSSINST+GV +   DEEITRSALSNF+AK
Sbjct: 2   MQNVQKPEQATPT----TLQNVVNSGSLSFNSSINSTSGVNVNVGDEEITRSALSNFKAK 61

Query: 275 EEEIERKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKE 334
           EEEIERKKMEVRERVQ QLGRVEEETKRL LIREELE +ADPMRKDVSVVRKRIDVVNKE
Sbjct: 62  EEEIERKKMEVRERVQLQLGRVEEETKRLALIREELEGMADPMRKDVSVVRKRIDVVNKE 121

Query: 335 LRPLGTNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVES 394
           LRPLGTNVQKKEKEY+DALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKS+ES
Sbjct: 122 LRPLGTNVQKKEKEYKDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSIES 178

[Close]

BLAST of Spo13783.1 vs. UniProtKB/TrEMBL
Match: U5G9X8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s11650g PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.000e-54
Identity = 127/177 (71.75%), Postives = 151/177 (85.31%), Query Frame = 1


		  
Query: 218 MQKSEQPPPAPPLPTIQSVANSGSLSFNSSINSTAGVGMQDEEITRSALSNFRAKEEEIE 277
           MQK EQ P      T+Q   NSGSLSF+S ++       +DEE++RSALS FRAKEEEIE
Sbjct: 1   MQKMEQQPQQQNQLTVQ---NSGSLSFSSQMSK------EDEEMSRSALSTFRAKEEEIE 60

Query: 278 RKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKELRPLG 337
           +KKMEVRE+VQAQLGRVEEETKRL +IREELE+LADPMRK+V+VVRK+ID VNKEL+PLG
Sbjct: 61  KKKMEVREKVQAQLGRVEEETKRLAMIREELEALADPMRKEVAVVRKKIDTVNKELKPLG 120

Query: 338 TNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVESLH 395
             VQKKEKEY+DAL+AFN+KNKEKVQLI KL+ELV ESERLR+KKLEELSK+++S+H
Sbjct: 121 HTVQKKEKEYKDALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDSMH 168

[Close]

BLAST of Spo13783.1 vs. UniProtKB/TrEMBL
Match: A0A061ESY3_THECC (Family of Uncharacterized protein function isoform 1 OS=Theobroma cacao GN=TCM_022486 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.300e-52
Identity = 125/180 (69.44%), Postives = 149/180 (82.78%), Query Frame = 1


		  
Query: 215 LQTMQKSEQPPPAPPLPTIQSVANSGSLSFNSSINSTAGVGMQDEEITRSALSNFRAKEE 274
           +QT Q+ +QP     L     V NSGSLSF+S ++       +DEEI++SALS FRAKEE
Sbjct: 2   MQTEQQQQQPQQQNQL----MVQNSGSLSFSSHLSK------EDEEISKSALSTFRAKEE 61

Query: 275 EIERKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKELR 334
           EIERKKMEVRE+VQ QLGRVEEETKRL  IREELE+LADPMRKDV++VRK+ID VNKEL+
Sbjct: 62  EIERKKMEVREKVQLQLGRVEEETKRLAFIREELEALADPMRKDVALVRKKIDAVNKELK 121

Query: 335 PLGTNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVESLH 394
           PLG   QKKE+EY++AL+AFNEKNKEKVQLI KL+ELV ESERLRMKKLEELSK+++S+H
Sbjct: 122 PLGHTCQKKEREYKEALEAFNEKNKEKVQLITKLMELVSESERLRMKKLEELSKNIDSIH 171

[Close]

BLAST of Spo13783.1 vs. UniProtKB/TrEMBL
Match: A9PC95_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s11650g PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.900e-52
Identity = 127/180 (70.56%), Postives = 151/180 (83.89%), Query Frame = 1


		  
Query: 218 MQKSEQPPPAPPLPTIQSVANSGSLSFNSSINSTAGVGMQDEEITRSALSNFRAKEEEIE 277
           MQK EQ P      T+Q   NSGSLSF+S ++       +DEE++RSALS FRAKEEEIE
Sbjct: 1   MQKMEQQPQQQNQLTVQ---NSGSLSFSSQMSK------EDEEMSRSALSTFRAKEEEIE 60

Query: 278 RKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKELRPLG 337
           +KKMEVRE+VQAQLGRVEEETKRL +IREELE+LADPMRK+V+VVRK+ID VNKEL+PLG
Sbjct: 61  KKKMEVREKVQAQLGRVEEETKRLAMIREELEALADPMRKEVAVVRKKIDTVNKELKPLG 120

Query: 338 TNVQKKEKEYRDALDAFNEKNKEKVQLINKLVE---LVGESERLRMKKLEELSKSVESLH 395
             VQKKEKEY+DAL+AFN+KNKEKVQLI KL+E   LV ESERLR+KKLEELSK+++S+H
Sbjct: 121 HTVQKKEKEYKDALEAFNDKNKEKVQLITKLMEFEQLVSESERLRLKKLEELSKNIDSMH 171

[Close]

BLAST of Spo13783.1 vs. TAIR (Arabidopsis)
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 207.2 bits (526), Expect = 1.800e-53
Identity = 119/181 (65.75%), Postives = 153/181 (84.53%), Query Frame = 1


		  
Query: 215 LQTMQKSEQPPPAPPLPTIQSVAN-SGSLSFNSSINSTAGVGMQDEEITRSALSNFRAKE 274
           +Q ++ S+    AP + + Q  A  SGS+SF+S ++       +DEE++R+ALS FRAKE
Sbjct: 4   MQAIETSQPTTVAPAVHSRQLGAQLSGSMSFSSQMSK------EDEEMSRTALSAFRAKE 63

Query: 275 EEIERKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKEL 334
           EEIE+KKME+RERVQAQLGRVEEETKRL LIREELE LADPMRK+V++VRK+ID VNKEL
Sbjct: 64  EEIEKKKMEIRERVQAQLGRVEEETKRLALIREELEGLADPMRKEVAMVRKKIDSVNKEL 123

Query: 335 RPLGTNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVESL 394
           +PLG  VQKKE+EY++AL+AFNEKN+EKVQLI +L+ELVGESE++RMKKLEELSK+++S+
Sbjct: 124 KPLGHTVQKKEREYKEALEAFNEKNREKVQLITRLMELVGESEKMRMKKLEELSKNIDSI 178

[Close]

BLAST of Spo13783.1 vs. TAIR (Arabidopsis)
Match: AT2G36410.1 (Family of unknown function (DUF662) )

HSP 1 Score: 201.8 bits (512), Expect = 7.700e-52
Identity = 122/189 (64.55%), Postives = 151/189 (79.89%), Query Frame = 1


		  
Query: 208 PPPPQQPLQTMQKSEQPPPAPPLPTIQSVANSGSLSFNSSINSTAGVGMQDEEITRSALS 267
           PP PQ          QP P P   + + V ++GSLSF+S ++       +DEE+TRSALS
Sbjct: 22  PPQPQS---------QPQPQPQQQSNEMVLHTGSLSFSSHMSR------EDEEMTRSALS 81

Query: 268 NFRAKEEEIERKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRID 327
            FRAKE+EIE+++MEVRER+QAQLGRVE+ETKRL  IREELES+ADPMRK+VSVVRK+ID
Sbjct: 82  AFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKID 141

Query: 328 VVNKELRPLGTNVQKKEKEYRDALDAFNEKNKEKVQLINKLVE---LVGESERLRMKKLE 387
            VNKEL+PLG+ VQKKE+EY++ALD FNEKN+EKVQLI KL+E   LVGESE+LRM KLE
Sbjct: 142 SVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMEMEQLVGESEKLRMIKLE 195

Query: 388 ELSKSVESL 394
           ELSKS+E++
Sbjct: 202 ELSKSIETV 195

[Close]

BLAST of Spo13783.1 vs. TAIR (Arabidopsis)
Match: AT3G52920.1 (Family of unknown function (DUF662) )

HSP 1 Score: 188.3 bits (477), Expect = 8.800e-48
Identity = 108/164 (65.85%), Postives = 137/164 (83.54%), Query Frame = 1


		  
Query: 232 TIQSVANSGSLSFNSSINSTAGVGMQDEEITRSALSNFRAKEEEIERKKMEVRERVQAQL 291
           T Q      SLSF+S ++       +DEE+ RSALS FRAKE+EIE++KMEVRERV+AQL
Sbjct: 8   TTQPPQQMMSLSFSSQMSK------EDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQL 67

Query: 292 GRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKELRPLGTNVQKKEKEYRDAL 351
           GRVEEET+RL  IREELE++ADPMRK+V+ VRK+ID VNKEL+PLG+ VQKKE+EY++AL
Sbjct: 68  GRVEEETRRLASIREELETMADPMRKEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEAL 127

Query: 352 DAFNEKNKEKVQLINKLVE---LVGESERLRMKKLEELSKSVES 393
           D FNEKN+EKVQLI KL+E   LVGESE+LR+KKL+ELS+S+++
Sbjct: 128 DTFNEKNREKVQLITKLMEMGQLVGESEKLRLKKLDELSRSIDT 165

[Close]

BLAST of Spo13783.1 vs. TAIR (Arabidopsis)
Match: AT5G03660.1 (Family of unknown function (DUF662) )

HSP 1 Score: 179.1 bits (453), Expect = 5.300e-45
Identity = 107/175 (61.14%), Postives = 136/175 (77.71%), Query Frame = 1


		  
Query: 218 MQKSEQPPPAPPLPTIQSVAN-SGSLSFNSSINSTAGVGMQDEEITRSALSNFRAKEEEI 277
           MQ +E   PAP     +     S S+SF+S +        +D+E++  ALS F+AKEEEI
Sbjct: 1   MQPTETSQPAPSDQGRRLKDQLSESMSFSSQMKK------EDDELSMKALSAFKAKEEEI 60

Query: 278 ERKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKELRPL 337
           E+KKME+RERVQAQLGRVE+E+KRL +IREELE  ADPMRK+V++VRK+ID ++KEL+PL
Sbjct: 61  EKKKMEIRERVQAQLGRVEDESKRLAMIREELEGFADPMRKEVTMVRKKIDSLDKELKPL 120

Query: 338 GTNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVE 392
           G  VQKKE EY+DAL+AFNEKNKEKV+LI KL EL GESE+ R KKLEELSK+++
Sbjct: 121 GNTVQKKETEYKDALEAFNEKNKEKVELITKLQELEGESEKFRFKKLEELSKNID 169

[Close]

BLAST of Spo13783.1 vs. TAIR (Arabidopsis)
Match: AT2G27740.1 (Family of unknown function (DUF662) )

HSP 1 Score: 169.5 bits (428), Expect = 4.200e-42
Identity = 95/174 (54.60%), Postives = 134/174 (77.01%), Query Frame = 1


		  
Query: 218 MQKSEQPPPAPPLPTIQSVANSGSLSFNSSINSTAGVGMQDEEITRSALSNFRAKEEEIE 277
           M  + Q    P  P IQ + +SG++S N S      +  ++EE+++SA + F+AKE+EIE
Sbjct: 1   MATTRQILEQPQSPFIQRIKSSGNISMNGS----PMIDEKEEELSQSAFALFKAKEDEIE 60

Query: 278 RKKMEVRERVQAQLGRVEEETKRLGLIREELESLADPMRKDVSVVRKRIDVVNKELRPLG 337
           R+KMEV++RVQ +LG  EE T+RL  IREELE+L DPMRK++S +RKR+D +N+EL+PLG
Sbjct: 61  RRKMEVKDRVQKKLGLAEEATRRLAEIREELEALTDPMRKEISAIRKRVDAINRELKPLG 120

Query: 338 TNVQKKEKEYRDALDAFNEKNKEKVQLINKLVELVGESERLRMKKLEELSKSVE 392
            + Q+KE+E+++AL+A+NEKNKEK   ++KLVELV ESE+LRM KLEELSKS+E
Sbjct: 121 QSCQRKEREFKEALEAYNEKNKEKAIFVSKLVELVTESEKLRMTKLEELSKSIE 170

The following BLAST results are available for this feature:

BLAST of Spo13783.1 vs. NCBI nr
BLAST of Spo13783.1 vs. UniProtKB/TrEMBL
BLAST of Spo13783.1 vs. ExPASy Swiss-Prot
BLAST of Spo13783.1 vs. TAIR (Arabidopsis)

BLAST of Spo13783.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902205281\|gb\|KNA15136.1\|	1.5e-81	99.4	hypothetical protein SOVF_1009...	[more]
gi\|731345311\|ref\|XP_010683857.1\|	9.4e-68	84.5	PREDICTED: uncharacterized pro...	[more]
gi\|566175755\|ref\|XP_006381309.1\|	1.0e-53	71.7	hypothetical protein POPTR_000...	[more]
gi\|470134352\|ref\|XP_004303018.1\|	8.5e-53	67.0	PREDICTED: structural maintena...	[more]
gi\|1009167159\|ref\|XP_015901969.1\|	2.5e-52	68.5	PREDICTED: reticulocyte-bindin...	[more]

BLAST of Spo13783.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R6K5_SPIOL	1.0e-81	99.4	Uncharacterized protein OS=Spi...	[more]
A0A0J8C1Y9_BETVU	6.5e-68	84.5	Uncharacterized protein OS=Bet...	[more]
U5G9X8_POPTR	7.0e-54	71.7	Uncharacterized protein OS=Pop...	[more]
A0A061ESY3_THECC	2.3e-52	69.4	Family of Uncharacterized prot...	[more]
A9PC95_POPTR	2.9e-52	70.5	Uncharacterized protein OS=Pop...	[more]

BLAST of Spo13783.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo13783.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G09980.1	1.8e-53	65.7	Family of unknown function (DU...	[more]
AT2G36410.1	7.7e-52	64.5	Family of unknown function (DU...	[more]
AT3G52920.1	8.8e-48	65.8	Family of unknown function (DU...	[more]
AT5G03660.1	5.3e-45	61.1	Family of unknown function (DU...	[more]
AT2G27740.1	4.2e-42	54.6	Family of unknown function (DU...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 238..392 score: 1.9
None	No IPR available	unknown	Coil	Coil	coord: 340..360 score: -coord: 266..286 scor
None	No IPR available	PANTHER	PTHR21470	NTKL-BINDING PROTEIN 1	coord: 213..394 score: 1.6

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007020	microtubule nucleation
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane