Spo13789.1 (mRNA) | SpinachBase

Overview


Name	Spo13789.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Rer1 protein, putative
Location	SpoScf_02787 : 781 .. 3252 (+)
Sequence length	739

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGAAAAGCTCAAAATTCACCTTATTAGCAAAAGAGGATAAAATAAATTAAAAGAAAAGATTAAAAATATCGGCATCCCATCCATCATCTTCTTCTCCCTCTCCTTCGCAAGCATATTCTCCCGTCAAACCCCAATCTAGAGTTGTGTGAGAAAACTTCGGATCCCAAATGATGGAGGCTGGTGGCGGAAGCGGCGGCGGTGGGGAAACCCTAAATCCAGAAACGCCAGCTTCCGTCGCATCACGGTGGGGCTTCATGGTATCGCAGCGGTTCCAGCATTTTCTGGACAAATCGACCCCCCACATGTTCTACCGTTGGATCGCCTTCTTCGTCATCGCCCTTGCTTACGCTATCCGAGTTTACTTCGTTCAAGGCTTCTACATCGTGTCGTATGGTTTGGGAATTTACATTCTTAACCTCCTCATCGCCTTTCTCTCTCCTCAGGTGGACCCCGAGATCCAGGAACTCACTGATGGTCCCACCCTCCCCACTCGCGGCTCCGATGAGTTCCGCCCCTTTGTTCGCCGCCTCCCTGAGTTCAAGTTCTGGTCTGTTCCCTTTCTCCTTCCTTCTATTTTTAATTTGGTTTTTAAATCTTTCTTTAAGAAAGTTGTATGTAATGCGTAGTATTTGACTGGAGCTCAGTTTAAAATCAAAGTTGGGTGATTTAGTATAAAGGGTAGTCAACAATTTTTATTTGGGGGGTTATAGTATGCTGCAATATATGCATTCATGAGTATAATTTGGTGAATTTTTTTCTTCTTTTTTCATTGGTTATAATGATAATTTCAGCATGATTTGTGATTTTACTTAAATAATGTTTGGTGATGCTGATCTGAGATCTTGTAGTACAATTAGGGTTGTTTTCCAGGGTTGATTTGTGTTTGGAATTAAATTAAAATTTGGGGTTTTTTGTATAATTGTGATGGGGTTTCGTCTGATTGGAAATCTTGTGTAGTATGATTAGTGTTAGGATATAGCATACTAGCATGACATGTTAATGCTGTGGATGCTCTTTTTATGTACTTATGTCTAAATGTGCTAATTACATGGTGAATGCCTGAACCTGAATTTTGGAACGGGGAGTGTGCGGTGTGATTAGTGTTGGGATGTAGCATACAAGCATGAATGTCAATGCTTATTGTCTAGTACAATTGCTTCTTAGGATTTTACTCTGTGTTTTTGTCAAAATGGTAGTTGCAAGAGTGGGAGAACAAGGCTTTGTAAGAAAGTGATTATCACCTTGCTAGTTAGTTAATGAATGACATATAGCTGAGGTTTGACTTCATAGATGAGCCAGTCGTTTGGTTGAGATTTAATGTGTGACTGAGAAGCTGTTGGTGATAAAACAGGTCATAATGGTTACTTGTACCAGGTTATGGTTAATTTTAGTAGGCATGTTTAATCCTATTTTTTCATTTCTCTGAAGTAATGCAAGTTATATCTACCCATAGACGTGATGAGGAGGGAGGGAGGGAGGGAAGGAGGTGTTATAGTTCAGGAGGGAAAGAGGGTGGGGAATATCTAAGATGTTATACAGTGTCTTTAGTGTCTTGGAGGATACGATGTTAATTAGAAATATGATAATTAAGGTTACTTGGTTTGGAAGACGCAAGGAGAAGCATAGAAGAAACTCTGGAATTCAAATAGACTGCAGGCTGGCTACAGAGCTCAATCGTGTCGCTACGTTGTTTTATAGATCTTTTTTCTGAGACCTATAGGCAATAAGTTTTATACCTTCTTTTGTAGTGAACAGAAGCTACAAAGGATATGGCATGTTGTTGGACTTGTGGTCCGTTGATTCCGGGTTCCTTTTGGTTGATCTTTGACTCACTCCATAGGCTTCAATCCAACAAATTATTATAAAAATTTCTTGCCAATTTAAAAGAAAGAAAGAAATGATAAATAAATATTTGGGATTAAGGCCTTTTAGTTGAACTAGGTATGGTTATCGTCTTATCGTTAATCTTGTTAGATCTGAGATTTTCTCTTACCATGCAATACATTTGGCTCCTCCCAAGGTTGGGTGGGGGAGGTTTGCCAGATGTGTACAGTCTTATCCTCCCTTCCAGTTCCTTGCAACTGCAAAAGAGGCTCTTTAGTGTTACCCCTACCCTAGTTTTCCATATGCGAGGGTCATGTATAAAAGACTAGTTGAAGATACATATCTATTGTGGAGTAAATATAGTAGAGACTTGATGCAGAAATGAAGTATTGTTACTCAAAAGAATGCTGTATAAAGTTTGTATTCACTTAATAATTGAATCTCCCTTATGTGAAGGTACTCTCTAACAAAAGCCTTCTGCATAGCTTTTGTCATGACATTTTCAAGTGTGTTTGATGTTCCCGTTTTTTGGCCAATACTCCTTTTCTACTGGGTTGTTTTATTCACCCTCACCATGAGAAGACAAATACACCATATGATCAAATACAGATATGTCCCCTTCTCCTTCGGGAAAAAGGTATGCTAA

mRNA sequence

TCCGAAAAGCTCAAAATTCACCTTATTAGCAAAAGAGGATAAAATAAATTAAAAGAAAAGATTAAAAATATCGGCATCCCATCCATCATCTTCTTCTCCCTCTCCTTCGCAAGCATATTCTCCCGTCAAACCCCAATCTAGAGTTGTGTGAGAAAACTTCGGATCCCAAATGATGGAGGCTGGTGGCGGAAGCGGCGGCGGTGGGGAAACCCTAAATCCAGAAACGCCAGCTTCCGTCGCATCACGGTGGGGCTTCATGGTATCGCAGCGGTTCCAGCATTTTCTGGACAAATCGACCCCCCACATGTTCTACCGTTGGATCGCCTTCTTCGTCATCGCCCTTGCTTACGCTATCCGAGTTTACTTCGTTCAAGGCTTCTACATCGTGTCGTATGGTTTGGGAATTTACATTCTTAACCTCCTCATCGCCTTTCTCTCTCCTCAGGTGGACCCCGAGATCCAGGAACTCACTGATGGTCCCACCCTCCCCACTCGCGGCTCCGATGAGTTCCGCCCCTTTGTTCGCCGCCTCCCTGAGTTCAAGTTCTGGTACTCTCTAACAAAAGCCTTCTGCATAGCTTTTGTCATGACATTTTCAAGTGTGTTTGATGTTCCCGTTTTTTGGCCAATACTCCTTTTCTACTGGGTTGTTTTATTCACCCTCACCATGAGAAGACAAATACACCATATGATCAAATACAGATATGTCCCCTTCTCCTTCGGGAAAAAGGTATGCTAA

Coding sequence (CDS)

ATGATGGAGGCTGGTGGCGGAAGCGGCGGCGGTGGGGAAACCCTAAATCCAGAAACGCCAGCTTCCGTCGCATCACGGTGGGGCTTCATGGTATCGCAGCGGTTCCAGCATTTTCTGGACAAATCGACCCCCCACATGTTCTACCGTTGGATCGCCTTCTTCGTCATCGCCCTTGCTTACGCTATCCGAGTTTACTTCGTTCAAGGCTTCTACATCGTGTCGTATGGTTTGGGAATTTACATTCTTAACCTCCTCATCGCCTTTCTCTCTCCTCAGGTGGACCCCGAGATCCAGGAACTCACTGATGGTCCCACCCTCCCCACTCGCGGCTCCGATGAGTTCCGCCCCTTTGTTCGCCGCCTCCCTGAGTTCAAGTTCTGGTACTCTCTAACAAAAGCCTTCTGCATAGCTTTTGTCATGACATTTTCAAGTGTGTTTGATGTTCCCGTTTTTTGGCCAATACTCCTTTTCTACTGGGTTGTTTTATTCACCCTCACCATGAGAAGACAAATACACCATATGATCAAATACAGATATGTCCCCTTCTCCTTCGGGAAAAAGGTATGCTAA

Protein sequence

MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKKVC

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo13789	Spo13789	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo13789.1	Spo13789.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13789.1.exon.1	Spo13789.1.exon.1	exon
Spo13789.1.exon.2	Spo13789.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13789.1.utr5p.1	Spo13789.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo13789.1.CDS.1	Spo13789.1.CDS.1	CDS
Spo13789.1.CDS.2	Spo13789.1.CDS.2	CDS

Homology

[Close]

BLAST of Spo13789.1 vs. NCBI nr
Match: gi|902239102|gb|KNA25446.1| (hypothetical protein SOVF_006120 isoform B [Spinacia oleracea])

HSP 1 Score: 375.9 bits (964), Expect = 4.000e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1


		  
Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY
Sbjct: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
           AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR
Sbjct: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV
Sbjct: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180

Query: 181 PFSFGKK 188
           PFSFGKK
Sbjct: 181 PFSFGKK 187

[Close]

BLAST of Spo13789.1 vs. NCBI nr
Match: gi|902239101|gb|KNA25445.1| (hypothetical protein SOVF_006120 isoform A [Spinacia oleracea])

HSP 1 Score: 375.9 bits (964), Expect = 4.000e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1


		  
Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY
Sbjct: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
           AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR
Sbjct: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV
Sbjct: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180

Query: 181 PFSFGKK 188
           PFSFGKK
Sbjct: 181 PFSFGKK 187

[Close]

BLAST of Spo13789.1 vs. NCBI nr
Match: gi|731336954|ref|XP_010679533.1| (PREDICTED: protein RER1A-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 339.0 bits (868), Expect = 5.500e-90
Identity = 169/190 (88.95%), Postives = 177/190 (93.16%), Query Frame = 1


		  
Query: 1   MMEAGGGS---GGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIA 60
           MMEAGGG     GGGETL+ ETPA+VASRW FM+SQRFQH LDKSTPH+ +RWIAF V+ 
Sbjct: 1   MMEAGGGGVVGDGGGETLSSETPATVASRWSFMLSQRFQHLLDKSTPHLLHRWIAFCVVV 60

Query: 61  LAYAIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF 120
           LAYA+RVYFVQGFYI+SYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF
Sbjct: 61  LAYAVRVYFVQGFYIISYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF 120

Query: 121 VRRLPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKY 180
           VRRLPEFKFWYSLTKAFCIAFVMTF SVFDVPVFWPILLFYW VLFTLTMRRQIHHMIKY
Sbjct: 121 VRRLPEFKFWYSLTKAFCIAFVMTFFSVFDVPVFWPILLFYWFVLFTLTMRRQIHHMIKY 180

Query: 181 RYVPFSFGKK 188
           RYVPFSFGKK
Sbjct: 181 RYVPFSFGKK 190

[Close]

BLAST of Spo13789.1 vs. NCBI nr
Match: gi|225438813|ref|XP_002283333.1| (PREDICTED: protein RER1A [Vitis vinifera])

HSP 1 Score: 293.5 bits (750), Expect = 2.600e-76
Identity = 145/186 (77.96%), Postives = 158/186 (84.95%), Query Frame = 1


		  
Query: 2   MEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYA 61
           ME     G G E L+  +P +  SRW   +S+++QH LDKSTPH+  RWI FF IA  Y 
Sbjct: 1   METAAAGGVGVEDLSSSSPVTSVSRWTHDISRKYQHLLDKSTPHILNRWIGFFAIAFIYI 60

Query: 62  IRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRL 121
           +RVYFVQGFYIVSYGLGIYILNLLI FLSPQVDPEIQEL DGPTLPTRGSDEFRPFVRRL
Sbjct: 61  VRVYFVQGFYIVSYGLGIYILNLLIGFLSPQVDPEIQELVDGPTLPTRGSDEFRPFVRRL 120

Query: 122 PEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVP 181
           PEFKFWYS+TKAFCIAFVMTF SVFDVPVFWPILLFYW+VLFTLTMRRQI HMIKY+YVP
Sbjct: 121 PEFKFWYSITKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFTLTMRRQIMHMIKYKYVP 180

Query: 182 FSFGKK 188
           FSFGK+
Sbjct: 181 FSFGKQ 186

[Close]

BLAST of Spo13789.1 vs. NCBI nr
Match: gi|976899289|gb|KVH87874.1| (hypothetical protein Ccrd_024806 [Cynara cardunculus var. scolymus])

HSP 1 Score: 285.8 bits (730), Expect = 5.500e-74
Identity = 133/170 (78.24%), Postives = 153/170 (90.00%), Query Frame = 1


		  
Query: 18  ETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYIVSYGL 77
           ETPA+   RW F+VSQR+QHFLDKSTP + YRWI F  IA+ YAIRV+FVQGFY+VSY L
Sbjct: 28  ETPAAAVQRWAFLVSQRYQHFLDKSTPFLLYRWIIFCAIAIIYAIRVFFVQGFYVVSYAL 87

Query: 78  GIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKFWYSLTKAFCIA 137
           GIYILNLLI FLSPQVDPE Q+L+DGPTLP+R SDEFRPFVRRLPEFKFWYS+TKAFCIA
Sbjct: 88  GIYILNLLIGFLSPQVDPEFQDLSDGPTLPSRSSDEFRPFVRRLPEFKFWYSITKAFCIA 147

Query: 138 FVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           FV+TF ++FDVPVFWPILLFYWV+LF LTM++QI HM+KY+YVPFSFGK+
Sbjct: 148 FVLTFFTIFDVPVFWPILLFYWVILFALTMKKQILHMVKYKYVPFSFGKQ 197

[Close]

BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S118_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006120 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 2.800e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1


		  
Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY
Sbjct: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
           AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR
Sbjct: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV
Sbjct: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180

Query: 181 PFSFGKK 188
           PFSFGKK
Sbjct: 181 PFSFGKK 187

[Close]

BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S119_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006120 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 2.800e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1


		  
Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY
Sbjct: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
           AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR
Sbjct: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV
Sbjct: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180

Query: 181 PFSFGKK 188
           PFSFGKK
Sbjct: 181 PFSFGKK 187

[Close]

BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C7R9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g127360 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 3.800e-90
Identity = 169/190 (88.95%), Postives = 177/190 (93.16%), Query Frame = 1


		  
Query: 1   MMEAGGGS---GGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIA 60
           MMEAGGG     GGGETL+ ETPA+VASRW FM+SQRFQH LDKSTPH+ +RWIAF V+ 
Sbjct: 1   MMEAGGGGVVGDGGGETLSSETPATVASRWSFMLSQRFQHLLDKSTPHLLHRWIAFCVVV 60

Query: 61  LAYAIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF 120
           LAYA+RVYFVQGFYI+SYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF
Sbjct: 61  LAYAVRVYFVQGFYIISYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPF 120

Query: 121 VRRLPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKY 180
           VRRLPEFKFWYSLTKAFCIAFVMTF SVFDVPVFWPILLFYW VLFTLTMRRQIHHMIKY
Sbjct: 121 VRRLPEFKFWYSLTKAFCIAFVMTFFSVFDVPVFWPILLFYWFVLFTLTMRRQIHHMIKY 180

Query: 181 RYVPFSFGKK 188
           RYVPFSFGKK
Sbjct: 181 RYVPFSFGKK 190

[Close]

BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Match: D7SVS2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00030 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.800e-76
Identity = 145/186 (77.96%), Postives = 158/186 (84.95%), Query Frame = 1


		  
Query: 2   MEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYA 61
           ME     G G E L+  +P +  SRW   +S+++QH LDKSTPH+  RWI FF IA  Y 
Sbjct: 1   METAAAGGVGVEDLSSSSPVTSVSRWTHDISRKYQHLLDKSTPHILNRWIGFFAIAFIYI 60

Query: 62  IRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRL 121
           +RVYFVQGFYIVSYGLGIYILNLLI FLSPQVDPEIQEL DGPTLPTRGSDEFRPFVRRL
Sbjct: 61  VRVYFVQGFYIVSYGLGIYILNLLIGFLSPQVDPEIQELVDGPTLPTRGSDEFRPFVRRL 120

Query: 122 PEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVP 181
           PEFKFWYS+TKAFCIAFVMTF SVFDVPVFWPILLFYW+VLFTLTMRRQI HMIKY+YVP
Sbjct: 121 PEFKFWYSITKAFCIAFVMTFFSVFDVPVFWPILLFYWMVLFTLTMRRQIMHMIKYKYVP 180

Query: 182 FSFGKK 188
           FSFGK+
Sbjct: 181 FSFGKQ 186

[Close]

BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Match: A0A103XBW6_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_024806 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 3.800e-74
Identity = 133/170 (78.24%), Postives = 153/170 (90.00%), Query Frame = 1


		  
Query: 18  ETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYIVSYGL 77
           ETPA+   RW F+VSQR+QHFLDKSTP + YRWI F  IA+ YAIRV+FVQGFY+VSY L
Sbjct: 28  ETPAAAVQRWAFLVSQRYQHFLDKSTPFLLYRWIIFCAIAIIYAIRVFFVQGFYVVSYAL 87

Query: 78  GIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKFWYSLTKAFCIA 137
           GIYILNLLI FLSPQVDPE Q+L+DGPTLP+R SDEFRPFVRRLPEFKFWYS+TKAFCIA
Sbjct: 88  GIYILNLLIGFLSPQVDPEFQDLSDGPTLPSRSSDEFRPFVRRLPEFKFWYSITKAFCIA 147

Query: 138 FVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           FV+TF ++FDVPVFWPILLFYWV+LF LTM++QI HM+KY+YVPFSFGK+
Sbjct: 148 FVLTFFTIFDVPVFWPILLFYWVILFALTMKKQILHMVKYKYVPFSFGKQ 197

[Close]

BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 7.200e-66
Identity = 124/187 (66.31%), Postives = 150/187 (80.21%), Query Frame = 1


		  
Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           M E+GG SG      +  TP    +   + +   +QH+LDK+TPH  YRWI   V+AL Y
Sbjct: 1   MDESGGDSG------SVATPVQQRAHEAWRI---YQHYLDKTTPHANYRWIGTLVVALIY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
            +RVY++QGFYI++YGLGIY+LNLLI FLSP VDPE   ++DGP+LPTRGSDEF+PF+RR
Sbjct: 61  CLRVYYIQGFYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYS+TKAFCIAF+MTF SVFDVPVFWPILL YW+VLF LTMRRQI HMIKY+Y+
Sbjct: 121 LPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYI 178

Query: 181 PFSFGKK 188
           PFSFGK+
Sbjct: 181 PFSFGKQ 178

[Close]

BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.400e-61
Identity = 116/175 (66.29%), Postives = 138/175 (78.86%), Query Frame = 1


		  
Query: 13  ETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYI 72
           ++ +  +PA   +R     SQR QH LDK+ PH+ YRWIA   + L Y +RVYFV+GFYI
Sbjct: 26  QSSDSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYI 85

Query: 73  VSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKFWYSLTK 132
           ++Y +GIY+LNL+IAFLSPQ DPE   LT G +LPTR SDE+RPFVRRLPEFKFW S+ +
Sbjct: 86  ITYAIGIYLLNLIIAFLSPQEDPE-ASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIR 145

Query: 133 AFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           AF I F+MTF  VFDVPVFWPILLFYWV+LF LTMR+QI HMIKYRYVPFSFGKK
Sbjct: 146 AFIIGFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKK 199

[Close]

BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=1 SV=2)

HSP 1 Score: 235.7 bits (600), Expect = 4.100e-61
Identity = 119/181 (65.75%), Postives = 141/181 (77.90%), Query Frame = 1


		  
Query: 7   GSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYF 66
           GSGG   ++       V   W     + +Q++LDK+TPH   RWI   V  L Y +RVY 
Sbjct: 3   GSGGDSGSMATPVQKKVHEAW-----RVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYS 62

Query: 67  VQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKF 126
           + GFYI+SYGLGIY+LNLLI FLSP VDPE+ E++DG TLPTRGSDEF+PF+RRLPEFKF
Sbjct: 63  IHGFYIISYGLGIYLLNLLIGFLSPLVDPEL-EVSDGATLPTRGSDEFKPFIRRLPEFKF 122

Query: 127 WYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGK 186
           WYS+TKAFCIAF+MTF SVFDVPVFWPILL YWVVLF LTMRRQI HMIK++Y+PFS GK
Sbjct: 123 WYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGK 177

Query: 187 K 188
           +
Sbjct: 183 Q 177

[Close]

BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Match: RER1_BOVIN (Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2)

HSP 1 Score: 196.8 bits (499), Expect = 2.100e-49
Identity = 96/167 (57.49%), Postives = 127/167 (76.05%), Query Frame = 1


		  
Query: 22  SVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYIVSYGLGIYI 81
           SV  R+   + Q +Q +LDKSTPH   RW+    ++  Y IRVY +QG+YIV+Y LGIY 
Sbjct: 16  SVVYRFFTRLGQIYQSWLDKSTPHTAVRWVVTLGLSFIYMIRVYLLQGWYIVTYALGIYH 75

Query: 82  LNLLIAFLSPQVDPEIQELTD-GPTLPTRGSDEFRPFVRRLPEFKFWYSLTKAFCIAFVM 141
           LNL IAFLSP+VDP + E +D GP+LPT+ ++EFRPF+RRLPEFKFW++ TK   +A V 
Sbjct: 76  LNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVC 135

Query: 142 TFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           TF   F+VPVFWPIL+ Y+++LF +TM+RQI HMIKYRY+PF+ GK+
Sbjct: 136 TFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKR 182

[Close]

BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Match: RER1_CHICK (Protein RER1 OS=Gallus gallus GN=RER1 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.700e-49
Identity = 97/167 (58.08%), Postives = 126/167 (75.45%), Query Frame = 1


		  
Query: 22  SVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYIVSYGLGIYI 81
           SV  R+   + Q +Q +LDKSTP+   RWI    ++  Y IRVY +QG+YIV+Y LGIY 
Sbjct: 16  SVVYRFFTRLGQIYQSWLDKSTPYTAVRWIVTLGLSFIYMIRVYLLQGWYIVTYALGIYH 75

Query: 82  LNLLIAFLSPQVDPEIQELTD-GPTLPTRGSDEFRPFVRRLPEFKFWYSLTKAFCIAFVM 141
           LNL IAFLSP+VDP + E +D GP+LPTR ++EFRPF+RRLPEFKFW+S TK   +A   
Sbjct: 76  LNLFIAFLSPKVDPSLMEDSDDGPSLPTRQNEEFRPFIRRLPEFKFWHSATKGILVAMAC 135

Query: 142 TFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           TF   F+VPVFWPIL+ Y+++LF +TM+RQI HMIKYRY+PF+ GK+
Sbjct: 136 TFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKR 182

[Close]

BLAST of Spo13789.1 vs. TAIR (Arabidopsis)
Match: AT4G39220.1 (Rer1 family protein)

HSP 1 Score: 251.5 bits (641), Expect = 4.000e-67
Identity = 124/187 (66.31%), Postives = 150/187 (80.21%), Query Frame = 1


		  
Query: 1   MMEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAY 60
           M E+GG SG      +  TP    +   + +   +QH+LDK+TPH  YRWI   V+AL Y
Sbjct: 1   MDESGGDSG------SVATPVQQRAHEAWRI---YQHYLDKTTPHANYRWIGTLVVALIY 60

Query: 61  AIRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRR 120
            +RVY++QGFYI++YGLGIY+LNLLI FLSP VDPE   ++DGP+LPTRGSDEF+PF+RR
Sbjct: 61  CLRVYYIQGFYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRR 120

Query: 121 LPEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYV 180
           LPEFKFWYS+TKAFCIAF+MTF SVFDVPVFWPILL YW+VLF LTMRRQI HMIKY+Y+
Sbjct: 121 LPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYI 178

Query: 181 PFSFGKK 188
           PFSFGK+
Sbjct: 181 PFSFGKQ 178

[Close]

BLAST of Spo13789.1 vs. TAIR (Arabidopsis)
Match: AT2G23310.1 (Rer1 family protein)

HSP 1 Score: 236.5 bits (602), Expect = 1.300e-62
Identity = 116/175 (66.29%), Postives = 138/175 (78.86%), Query Frame = 1


		  
Query: 13  ETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYFVQGFYI 72
           ++ +  +PA   +R     SQR QH LDK+ PH+ YRWIA   + L Y +RVYFV+GFYI
Sbjct: 26  QSSDSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYI 85

Query: 73  VSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKFWYSLTK 132
           ++Y +GIY+LNL+IAFLSPQ DPE   LT G +LPTR SDE+RPFVRRLPEFKFW S+ +
Sbjct: 86  ITYAIGIYLLNLIIAFLSPQEDPE-ASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIR 145

Query: 133 AFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGKK 188
           AF I F+MTF  VFDVPVFWPILLFYWV+LF LTMR+QI HMIKYRYVPFSFGKK
Sbjct: 146 AFIIGFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKK 199

[Close]

BLAST of Spo13789.1 vs. TAIR (Arabidopsis)
Match: AT2G21600.1 (endoplasmatic reticulum retrieval protein 1B)

HSP 1 Score: 235.7 bits (600), Expect = 2.300e-62
Identity = 119/181 (65.75%), Postives = 141/181 (77.90%), Query Frame = 1


		  
Query: 7   GSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYAIRVYF 66
           GSGG   ++       V   W     + +Q++LDK+TPH   RWI   V  L Y +RVY 
Sbjct: 3   GSGGDSGSMATPVQKKVHEAW-----RVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYS 62

Query: 67  VQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRLPEFKF 126
           + GFYI+SYGLGIY+LNLLI FLSP VDPE+ E++DG TLPTRGSDEF+PF+RRLPEFKF
Sbjct: 63  IHGFYIISYGLGIYLLNLLIGFLSPLVDPEL-EVSDGATLPTRGSDEFKPFIRRLPEFKF 122

Query: 127 WYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVPFSFGK 186
           WYS+TKAFCIAF+MTF SVFDVPVFWPILL YWVVLF LTMRRQI HMIK++Y+PFS GK
Sbjct: 123 WYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGK 177

Query: 187 K 188
           +
Sbjct: 183 Q 177

[Close]

BLAST of Spo13789.1 vs. TAIR (Arabidopsis)
Match: AT2G18240.1 (Rer1 family protein)

HSP 1 Score: 194.9 bits (494), Expect = 4.500e-50
Identity = 104/187 (55.61%), Postives = 132/187 (70.59%), Query Frame = 1


		  
Query: 2   MEAGGGSGGGGETLNPETPASVASRWGFMVSQRFQHFLDKSTPHMFYRWIAFFVIALAYA 61
           ME   GS    +T+     AS  ++W    S+ FQ++LD+S P++  RW+   V A+ Y 
Sbjct: 1   MEDEPGSENEADTI----VASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYI 60

Query: 62  IRVYFVQGFYIVSYGLGIYILNLLIAFLSPQVDPEIQELTDGPTLPTRGSDEFRPFVRRL 121
            RVY V G++++SYGL  YILNLLI FLSP+VDPE++ L D  +LP   SDE++PFVRRL
Sbjct: 61  YRVYSVYGYFVISYGLATYILNLLIGFLSPKVDPELEAL-DPDSLPVDESDEYKPFVRRL 120

Query: 122 PEFKFWYSLTKAFCIAFVMTFSSVFDVPVFWPILLFYWVVLFTLTMRRQIHHMIKYRYVP 181
           PEFKFWY+ TKAF +AFVMTF S  DVPVFWPILL YW+VL++LTM+R I HM KYRY P
Sbjct: 121 PEFKFWYAATKAFVVAFVMTFFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFP 180

Query: 182 FSFGKKV 189
           F   K V
Sbjct: 181 FDVRKPV 182

The following BLAST results are available for this feature:

BLAST of Spo13789.1 vs. NCBI nr
BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
BLAST of Spo13789.1 vs. TAIR (Arabidopsis)

BLAST of Spo13789.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902239102\|gb\|KNA25446.1\|	4.0e-101	100.	hypothetical protein SOVF_0061...	[more]
gi\|902239101\|gb\|KNA25445.1\|	4.0e-101	100.	hypothetical protein SOVF_0061...	[more]
gi\|731336954\|ref\|XP_010679533.1\|	5.5e-90	88.9	PREDICTED: protein RER1A-like ...	[more]
gi\|225438813\|ref\|XP_002283333.1\|	2.6e-76	77.9	PREDICTED: protein RER1A [Viti...	[more]
gi\|976899289\|gb\|KVH87874.1\|	5.5e-74	78.2	hypothetical protein Ccrd_0248...	[more]

BLAST of Spo13789.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9S118_SPIOL	2.8e-101	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9S119_SPIOL	2.8e-101	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C7R9_BETVU	3.8e-90	88.9	Uncharacterized protein OS=Bet...	[more]
D7SVS2_VITVI	1.8e-76	77.9	Putative uncharacterized prote...	[more]
A0A103XBW6_CYNCS	3.8e-74	78.2	Uncharacterized protein OS=Cyn...	[more]

BLAST of Spo13789.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RER1A_ARATH	7.2e-66	66.3	Protein RER1A OS=Arabidopsis t...	[more]
RER1C_ARATH	2.4e-61	66.2	Protein RER1C OS=Arabidopsis t...	[more]
RER1B_ARATH	4.1e-61	65.7	Protein RER1B OS=Arabidopsis t...	[more]
RER1_BOVIN	2.1e-49	57.4	Protein RER1 OS=Bos taurus GN=...	[more]
RER1_CHICK	4.7e-49	58.0	Protein RER1 OS=Gallus gallus ...	[more]

BLAST of Spo13789.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT4G39220.1	4.0e-67	66.3	Rer1 family protein	[more]
AT2G23310.1	1.3e-62	66.2	Rer1 family protein	[more]
AT2G21600.1	2.3e-62	65.7	endoplasmatic reticulum retrie...	[more]
AT2G18240.1	4.5e-50	55.6	Rer1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004932	Retrieval of early ER protein Rer1	PIR	PIRSF016013	AtER_Rer1p	coord: 13..189 score: 5.2
IPR004932	Retrieval of early ER protein Rer1	PANTHER	PTHR10743	PROTEIN RER1	coord: 1..187 score: 6.0E
IPR004932	Retrieval of early ER protein Rer1	PFAM	PF03248	Rer1	coord: 31..187 score: 1.1
None	No IPR available	PANTHER	PTHR10743:SF1	PROTEIN RER1C	coord: 1..187 score: 6.0E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER
biological_process	GO:0045185	maintenance of protein location
cellular_component	GO:0016021	integral component of membrane