Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGATCCGTCTAAATATATATCGAGTCAATTTAAACCGAGTCAAATTAATTGGTAATCCAATTCATAATCCTAAAAGGATTATACACATCATACATAACAACATCAATAATGAAATAATCCAGTAATATTTTAACATATCTCACCTTTTTCCCTCTCTAAAAATAAATAAAATATCGTTTACAACAACTAGTCATAGTGTCATACTATCCTACAAATTCTCCCTTATATAAACCCACTAACAACACCTTCTCTTCCATACCAATTACCAAACCCTCTTCCTCAAAACACCCTTTTCTTAGCCACCAATTAAACTCCCTCTTTTTCACAAAAGCAATGAAGTTCCGATCATCATCCGCCGTGTTAACCACCGTCCTTGTCACATTCCTCCTCTCACATCTAGCGTCAGCAACGGCCGTACCTGCCCGGACCGATGCAGAGGTAATGGGCCTGTACCAAAAGTGGCAGGCCCATCACGGTAAGGCCCGTAATGGGCTGCCTAGCCCAGATGATCAGAAAAGGTTTGAGATATTTAAAGATAACTTGTATTTCGTTGATGAGCATAACTCCGTGGACCCGGACCGGTCTTACAAAGTCGGGCTTAACAAGTTTGCTGATCTTACTAATGAAGAGTACCGATCCATGTTCTTGGGTAACCGGCCCGCCCGGCCCTATACCCAAAGACAAAAGGTCAGTCATCGTTACAGGCCGCGGCCCGGTGACCGGTTGCCTAAAGCCGTGGATTGGAGGAAGCTTGGTGCTGTTAACGACGTCAAAGATCAAGGCCAATGTGGTATGAATTCTTCGTATTTTTTTAATTAAAGATGAAGTATTAGATTCCGTAATTTCTTAAATAAAAGTATAAAAGTATTAAGATTCCCTCAAAAAAAGTATTTAGATTCCCTAAAGAAGGGGATAAGCTTAAGCAATTAGGTTGAAAACGTTATCATATTCTATGACGTGTGCTAACGAGGATTATAATCATATTATTCGACACGCCTACTTAATTTTTTTTATTTATTTACGTACCAATGAGCTTTTGGTATAATGGTTAAAAATTTAAAACTAAGAACTTGTGTATACATATAATTTTAACTATCCTAATCCTTATGATTATGATTAAGGTAATTAATTTCATTACTTAAGTTATATGACACTAAAATGGTATTTCGTATAAGACCGCTTTATATAAAAATTTTGTATACTTAGAGTACTCCTAACTTCCTAATCGGTTGCATCTTTTCATGTTAAAGTCGTTGATCTTCCGTATTGGATAAGGGATTCCTACCTTGAGGTAGGAGTGTAGGACACTTTTGAATATAGTAGTTTGTAAATATTGTTACAAGCTAACAATATTTACATTTGACCCTATTTACAAATTTTAGTTTTGACCATCTTTTGTGATTTAAGGATAAAGAAAAATATAGTCGATTCGTCTTAAATCTATTTTTAATAATGTTTACGATTTTAAAATTAAAGATGTTCATGTTTAAACATTACATTGACAAAAAATAAAGTGTAACCATTAAATTGAAATGACGGGCCAACAAATTACGGAAGCAGGCCCATATCCCATTCAAATTAGACATTTGGGCCAGCCCTGTTGCATGTCCTTAGAATCTCAGTAAACTAAGTACAATCAGGCCCAAAAGCCATCTAACTGGAAAGAAATAACTAACTCCCCTGTTTTTTTTTTTTCTGTTATTATAGGTAGTTGCTGGGCATTCTCAACGGTAGCAACCGTAGAAGCCATCAACCAGATTGTGACAGGCAACTTGACCTCCTTGTCCGAACAAGAGCTCGTCGACTGTGACCGAGCCGTTGATCAAGGATGCAACGGCGGTCTCATGGACAACGCCTTCCAATTCATCCTCGAGAACGGTGGTTTAGACACTGAGGAAGATTATCCTTACAAGGGTGTTGATGGCCAATGTGATGCTAATAGGGTACGTGAATTTGACTAAATTTTAGTACTATCTCCGTTCCTAAATGGTCTTTACGCTTACTATTTGCATGGTAATTAAGAAATTTTGGCATGTGATGGTGGGGTAAAATGAGTGGTTATAAACTGTCCAATATTAATATTAGTTATGGTAGGCCAAATGAGAGTAAAAATAGAATAAAGTAGATGGTAAAGAACATTCAGTAACGGACTAAAACGGAAAACGTAAAGAATTTTAAGGAATAGAGGTAGCACTATATTACCTTAACGGTTCTGTTCTCTTTATTTCCACTTGACCAAGTATAATTTATAATTAAATAAGTTTTGATAAGGTCGAAAAAAATCAAGTGAATAGAAAGTAGCACTCTTAAATTTTGATTAACATATTGTAAATTATTTATCTTTGCTAAAGCATTTTTTTTACTTTCGATTTTCAGAAGAACAAGAAAGTTGTGACTATTGATAGCTATGAAGATGTCCAGCCATACAGCGAGAAAGCTTTGAAGAAAGCTGTTGCTCACCAGCCCGTAAGCGTTGCCATTGAGGCTAGTGGCAGAGCTCTCCAGCTTTACCAATCGGTAAGGATTTTTTCACTCGTTCTTGGTTAAAATTTTCAGCTTTTTATCTATCATAGTAAAAGAAATGTTATAGAATTTGGCCTTGTTACATGGTACATAGGGATGGGCATGAGTCAAGGACCCGACCTAGATCCTTTAGGGTGTAGGTCCGATTGTTTGAGACTGTTGGATTTGGGTCTAATATTCTCAGACTCAGACCCATTCCAAATCTGACCTATAGACCCATTTATTATTAAAATATATGAATATAACTTGGTTTTAGGCATATTTTCGACTTTGGATTGCAATGGAAGTAATATTTACTCCGTATTAACTTATGAATTTTATGTACATTTCCTAATCTATCTTAACGACATACAAAATGATGGTCAAATTATTGGATTAGAAAAAAATTTAGACACAATATTATATAAGTAAACTTTCAAGACCAATTTCATACTCTAGACCGCCGGACCTATTGGATCTGAAATTTTCAAACTCAGTGGATCTTGGTCCATATGAAAGACATAGTTTAGGACTGTTCCAGACCCGCCATAACTATTGGATCTGGCCCATCTGGGTATGGATCTAAAATTTTCAAACCCAGTGGATCTAGGGCTGATTTTGGTCCCAATATGAAAGATATGGGGTCAGGGCCGCCCGAGACCCGCCCTATGCCCATCCTATTAGTAATACTAATTTGGTATGCATAGGAGAAATACTCTAGGAAATCAGTAAAAAGTATGTGATTTTAATCAATTCTTTGGTTTGCTTCTCTTGGAATGCAGGGTGTTTTCACTGGCCATTGTGGGACGAACCTCGACCACGCGGTGGTCGTTGTAGGATACGGAACAGAGAACGGAATAGACTATTGGATAGTAAGGAACTCATGGGGAAACGGATGGGGGGAGGAAGGATACATTAGGCTACGCCGTAACGTCCATAAACTCACCGGAAAATGTGGGATAGTTATGCAACCATCTTACCCAGTTAAGCAAACTCAGAACCCCATCAAGCTTTTCTCGGATATCGAAAGTGATGAAGGGATTGTAAGCAGCACTTGATCAAGGGAAAAAAAATACTAGAGATTATTTATGGAAGTTGCTAAATTAATACACTTGTTTAGCGATCTTAATTCATGATTAATGATTCCTGTTTTAGTATTATTAATAGGAGCCTGCTGCATGGCTAGCTGCCTCTATTTGTGTATAGCTTTAAGTTAAATTTGCATCATCAGCTAAGGGAGGGGGAAAAAAAGCAGATGTTGTAAGATTTAGAAGTTTGACTTTCAGTTTTTAGTAATGGAAGTTTCTTAATTAATTAGTCTTTGAATTCCTCTGATTTTTCACTACTATTGTCCTCAATTCTGCATTATTATGTCGATCAGTTAATCAGAAGAATAGAAATGCAACAACTGGTGATTTGTTAATGTGTTTGCCACCTTAAAAAGTCACATTGTATTGGGG TAGATCCGTCTAAATATATATCGAGTCAATTTAAACCGAGTCAAATTAATTGGTAATCCAATTCATAATCCTAAAAGGATTATACACATCATACATAACAACATCAATAATGAAATAATCCAGTAATATTTTAACATATCTCACCTTTTTCCCTCTCTAAAAATAAATAAAATATCGTTTACAACAACTAGTCATAGTGTCATACTATCCTACAAATTCTCCCTTATATAAACCCACTAACAACACCTTCTCTTCCATACCAATTACCAAACCCTCTTCCTCAAAACACCCTTTTCTTAGCCACCAATTAAACTCCCTCTTTTTCACAAAAGCAATGAAGTTCCGATCATCATCCGCCGTGTTAACCACCGTCCTTGTCACATTCCTCCTCTCACATCTAGCGTCAGCAACGGCCGTACCTGCCCGGACCGATGCAGAGGTAATGGGCCTGTACCAAAAGTGGCAGGCCCATCACGGTAAGGCCCGTAATGGGCTGCCTAGCCCAGATGATCAGAAAAGGTTTGAGATATTTAAAGATAACTTGTATTTCGTTGATGAGCATAACTCCGTGGACCCGGACCGGTCTTACAAAGTCGGGCTTAACAAGTTTGCTGATCTTACTAATGAAGAGTACCGATCCATGTTCTTGGGTAACCGGCCCGCCCGGCCCTATACCCAAAGACAAAAGGTCAGTCATCGTTACAGGCCGCGGCCCGGTGACCGGTTGCCTAAAGCCGTGGATTGGAGGAAGCTTGGTGCTGTTAACGACGTCAAAGATCAAGGCCAATGTGGTAGTTGCTGGGCATTCTCAACGGTAGCAACCGTAGAAGCCATCAACCAGATTGTGACAGGCAACTTGACCTCCTTGTCCGAACAAGAGCTCGTCGACTGTGACCGAGCCGTTGATCAAGGATGCAACGGCGGTCTCATGGACAACGCCTTCCAATTCATCCTCGAGAACGGTGGTTTAGACACTGAGGAAGATTATCCTTACAAGGGTGTTGATGGCCAATGTGATGCTAATAGGAAGAACAAGAAAGTTGTGACTATTGATAGCTATGAAGATGTCCAGCCATACAGCGAGAAAGCTTTGAAGAAAGCTGTTGCTCACCAGCCCGTAAGCGTTGCCATTGAGGCTAGTGGCAGAGCTCTCCAGCTTTACCAATCGGGTGTTTTCACTGGCCATTGTGGGACGAACCTCGACCACGCGGTGGTCGTTGTAGGATACGGAACAGAGAACGGAATAGACTATTGGATAGTAAGGAACTCATGGGGAAACGGATGGGGGGAGGAAGGATACATTAGGCTACGCCGTAACGTCCATAAACTCACCGGAAAATGTGGGATAGTTATGCAACCATCTTACCCAGTTAAGCAAACTCAGAACCCCATCAAGCTTTTCTCGGATATCGAAAGTGATGAAGGGATTGTAAGCAGCACTTGATCAAGGGAAAAAAAATACTAGAGATTATTTATGGAAGTTGCTAAATTAATACACTTGTTTAGCGATCTTAATTCATGATTAATGATTCCTGTTTTAGTATTATTAATAGGAGCCTGCTGCATGGCTAGCTGCCTCTATTTGTGTATAGCTTTAAGTTAAATTTGCATCATCAGCTAAGGGAGGGGGAAAAAAAGCAGATGTTGTAAGATTTAGAAGTTTGACTTTCAGTTTTTAGTAATGGAAGTTTCTTAATTAATTAGTCTTTGAATTCCTCTGATTTTTCACTACTATTGTCCTCAATTCTGCATTATTATGTCGATCAGTTAATCAGAAGAATAGAAATGCAACAACTGGTGATTTGTTAATGTGTTTGCCACCTTAAAAAGTCACATTGTATTGGGG ATGAAGTTCCGATCATCATCCGCCGTGTTAACCACCGTCCTTGTCACATTCCTCCTCTCACATCTAGCGTCAGCAACGGCCGTACCTGCCCGGACCGATGCAGAGGTAATGGGCCTGTACCAAAAGTGGCAGGCCCATCACGGTAAGGCCCGTAATGGGCTGCCTAGCCCAGATGATCAGAAAAGGTTTGAGATATTTAAAGATAACTTGTATTTCGTTGATGAGCATAACTCCGTGGACCCGGACCGGTCTTACAAAGTCGGGCTTAACAAGTTTGCTGATCTTACTAATGAAGAGTACCGATCCATGTTCTTGGGTAACCGGCCCGCCCGGCCCTATACCCAAAGACAAAAGGTCAGTCATCGTTACAGGCCGCGGCCCGGTGACCGGTTGCCTAAAGCCGTGGATTGGAGGAAGCTTGGTGCTGTTAACGACGTCAAAGATCAAGGCCAATGTGGTAGTTGCTGGGCATTCTCAACGGTAGCAACCGTAGAAGCCATCAACCAGATTGTGACAGGCAACTTGACCTCCTTGTCCGAACAAGAGCTCGTCGACTGTGACCGAGCCGTTGATCAAGGATGCAACGGCGGTCTCATGGACAACGCCTTCCAATTCATCCTCGAGAACGGTGGTTTAGACACTGAGGAAGATTATCCTTACAAGGGTGTTGATGGCCAATGTGATGCTAATAGGAAGAACAAGAAAGTTGTGACTATTGATAGCTATGAAGATGTCCAGCCATACAGCGAGAAAGCTTTGAAGAAAGCTGTTGCTCACCAGCCCGTAAGCGTTGCCATTGAGGCTAGTGGCAGAGCTCTCCAGCTTTACCAATCGGGTGTTTTCACTGGCCATTGTGGGACGAACCTCGACCACGCGGTGGTCGTTGTAGGATACGGAACAGAGAACGGAATAGACTATTGGATAGTAAGGAACTCATGGGGAAACGGATGGGGGGAGGAAGGATACATTAGGCTACGCCGTAACGTCCATAAACTCACCGGAAAATGTGGGATAGTTATGCAACCATCTTACCCAGTTAAGCAAACTCAGAACCCCATCAAGCTTTTCTCGGATATCGAAAGTGATGAAGGGATTGTAAGCAGCACTTGA MKFRSSSAVLTTVLVTFLLSHLASATAVPARTDAEVMGLYQKWQAHHGKARNGLPSPDDQKRFEIFKDNLYFVDEHNSVDPDRSYKVGLNKFADLTNEEYRSMFLGNRPARPYTQRQKVSHRYRPRPGDRLPKAVDWRKLGAVNDVKDQGQCGSCWAFSTVATVEAINQIVTGNLTSLSEQELVDCDRAVDQGCNGGLMDNAFQFILENGGLDTEEDYPYKGVDGQCDANRKNKKVVTIDSYEDVQPYSEKALKKAVAHQPVSVAIEASGRALQLYQSGVFTGHCGTNLDHAVVVVGYGTENGIDYWIVRNSWGNGWGEEGYIRLRRNVHKLTGKCGIVMQPSYPVKQTQNPIKLFSDIESDEGIVSST Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo13791.1 vs. NCBI nr
Match: gi|902239099|gb|KNA25443.1| (hypothetical protein SOVF_006100 [Spinacia oleracea]) HSP 1 Score: 742.7 bits (1916), Expect = 3.200e-211 Identity = 366/369 (99.19%), Postives = 366/369 (99.19%), Query Frame = 1
BLAST of Spo13791.1 vs. NCBI nr
Match: gi|731336950|ref|XP_010679531.1| (PREDICTED: cysteine proteinase COT44-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 612.1 bits (1577), Expect = 6.500e-172 Identity = 303/372 (81.45%), Postives = 328/372 (88.17%), Query Frame = 1
BLAST of Spo13791.1 vs. NCBI nr
Match: gi|398330368|gb|AFO83613.1| (papain-like cysteine protease [Fagopyrum esculentum]) HSP 1 Score: 488.4 bits (1256), Expect = 1.100e-134 Identity = 239/350 (68.29%), Postives = 283/350 (80.86%), Query Frame = 1
BLAST of Spo13791.1 vs. NCBI nr
Match: gi|702461489|ref|XP_010028205.1| (PREDICTED: cysteine proteinase COT44-like [Eucalyptus grandis]) HSP 1 Score: 462.6 bits (1189), Expect = 6.400e-127 Identity = 229/361 (63.43%), Postives = 272/361 (75.35%), Query Frame = 1
BLAST of Spo13791.1 vs. NCBI nr
Match: gi|922370570|ref|XP_013457448.1| (papain family cysteine protease [Medicago truncatula]) HSP 1 Score: 461.5 bits (1186), Expect = 1.400e-126 Identity = 235/366 (64.21%), Postives = 281/366 (76.78%), Query Frame = 1
BLAST of Spo13791.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S145_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006100 PE=3 SV=1) HSP 1 Score: 742.7 bits (1916), Expect = 2.200e-211 Identity = 366/369 (99.19%), Postives = 366/369 (99.19%), Query Frame = 1
BLAST of Spo13791.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CCR5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g127340 PE=3 SV=1) HSP 1 Score: 612.1 bits (1577), Expect = 4.500e-172 Identity = 303/372 (81.45%), Postives = 328/372 (88.17%), Query Frame = 1
BLAST of Spo13791.1 vs. UniProtKB/TrEMBL
Match: T1P730_FAGES (Papain-like cysteine protease OS=Fagopyrum esculentum GN=RDL1 PE=2 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 7.600e-135 Identity = 239/350 (68.29%), Postives = 283/350 (80.86%), Query Frame = 1
BLAST of Spo13791.1 vs. UniProtKB/TrEMBL
Match: A0A059AMB2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00879 PE=3 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 4.500e-127 Identity = 229/361 (63.43%), Postives = 272/361 (75.35%), Query Frame = 1
BLAST of Spo13791.1 vs. UniProtKB/TrEMBL
Match: A0A072UNT0_MEDTR (Papain family cysteine protease OS=Medicago truncatula GN=MTR_4g094918 PE=3 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 9.900e-127 Identity = 235/366 (64.21%), Postives = 281/366 (76.78%), Query Frame = 1
BLAST of Spo13791.1 vs. ExPASy Swiss-Prot
Match: RD21B_ARATH (Probable cysteine protease RD21B OS=Arabidopsis thaliana GN=RD21B PE=1 SV=1) HSP 1 Score: 451.1 bits (1159), Expect = 1.200e-125 Identity = 221/330 (66.97%), Postives = 257/330 (77.88%), Query Frame = 1
BLAST of Spo13791.1 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21A OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 1.600e-122 Identity = 211/346 (60.98%), Postives = 264/346 (76.30%), Query Frame = 1
BLAST of Spo13791.1 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2) HSP 1 Score: 421.4 bits (1082), Expect = 1.000e-116 Identity = 206/356 (57.87%), Postives = 261/356 (73.31%), Query Frame = 1
BLAST of Spo13791.1 vs. ExPASy Swiss-Prot
Match: RDL1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2) HSP 1 Score: 418.7 bits (1075), Expect = 6.600e-116 Identity = 202/330 (61.21%), Postives = 248/330 (75.15%), Query Frame = 1
BLAST of Spo13791.1 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 6.200e-114 Identity = 198/329 (60.18%), Postives = 250/329 (75.99%), Query Frame = 1
BLAST of Spo13791.1 vs. TAIR (Arabidopsis)
Match: AT5G43060.1 (Granulin repeat cysteine protease family protein) HSP 1 Score: 451.1 bits (1159), Expect = 6.800e-127 Identity = 221/330 (66.97%), Postives = 257/330 (77.88%), Query Frame = 1
BLAST of Spo13791.1 vs. TAIR (Arabidopsis)
Match: AT1G47128.1 (Granulin repeat cysteine protease family protein) HSP 1 Score: 440.7 bits (1132), Expect = 9.200e-124 Identity = 211/346 (60.98%), Postives = 264/346 (76.30%), Query Frame = 1
BLAST of Spo13791.1 vs. TAIR (Arabidopsis)
Match: AT4G36880.1 (cysteine proteinase1) HSP 1 Score: 418.7 bits (1075), Expect = 3.700e-117 Identity = 202/330 (61.21%), Postives = 248/330 (75.15%), Query Frame = 1
BLAST of Spo13791.1 vs. TAIR (Arabidopsis)
Match: AT3G19390.1 (Granulin repeat cysteine protease family protein) HSP 1 Score: 394.4 bits (1012), Expect = 7.500e-110 Identity = 200/354 (56.50%), Postives = 253/354 (71.47%), Query Frame = 1
BLAST of Spo13791.1 vs. TAIR (Arabidopsis)
Match: AT3G19400.1 (Cysteine proteinases superfamily protein) HSP 1 Score: 379.0 bits (972), Expect = 3.300e-105 Identity = 198/346 (57.23%), Postives = 249/346 (71.97%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo13791.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo13791.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo13791.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo13791.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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