Spo14025.1 (mRNA)

Overview
NameSpo14025.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionO-methyltransferase family protein
LocationSuper_scaffold_66 : 1414227 .. 1418727 (-)
Sequence length405
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCTCTTTCCAACCGAGCTTACCAACAGGAGCCTCATGCAGGAATTGGTAAAGAAGTGGAAGTTCTCGTCTGAATTGCCTCTGAAATTAGGAAGGGGAAGTATAGTTTACGACATAAGGAGTTGCAACAACACAAAGTTACTCGATTAAGTGATTTTAGTTGTTGAAAAATTAATTTTTTGAAAATTTCCCAATTTGGGAACGGAAGAACAAATATGAGCTGAGAAGGAGGTAAATGGTCAGAATAATTAATTGGTGACGGAAGAATCGAAGCAAATATTTAATCCGTGATTTTTGCATTGGAAAATGGTTAATTGAACAACATTTTTTTTTTTCCTTTCCCACTTGCCCATAATACTAAATACAGTTAACCTAATAACGTAAAAGAGTTTTTAATTTTTTTGCGGCCCTCTTTTGGCTTGTGCCCTTTTTTTTTTTTGGTCAGAAAGAGTTACTTCATTAATTTCTAAGCACCAAAACGTTATCTAGAGTTTTTTCACATAGCCCCACTCCTTACGGAGGCAAAAATACAGCCACTTATGGCATAATTACGAAGCAAGCATGCTTCCAAAAAATAAGTTTCATTGTCACTAGAGATATCATTAGCTTAACATGGTGGGGGGGATAAATCAACGCCTTGATCCAACAGACTCAGTCGGGTCGTGGCCTTCTTTGCCACGTACACTACTACCAAAATATCATTTAACAGCGTTAATTTAACAGCGCTTTTTACCCTTATGCTGTTAAAGATATCAAATATAATATATTACAGCGCTTATAATAAACGCGCTATCATAAATGCTCACATTACAGCGCTTACTGGATATGCCCTGTCATATTTGCAGATGTATAACAGCGCTCCAACAACCAACGCTGTCAAATAATATACGAAAAAAAACCTAACACACTCTCAAAACATAAAACAACCGGTTTCTTCCTCCCTCGTTTCTTCCCTGCAAAACCCTTATACTGTCAATACTCTCAAATCTCAATCGATCACAACCGGAGCGGCGAAACCCACGGCGGAGATTTCCTTCACGCGGTGTTTCCCTTCGCCTGGCGGCGCTTCCCTTCTCACGGCAAGATTGAATAATCGAATTGGAAGGTATACTCCATAGAGTTCAATGAATTTTGCTAATTTATGTTTGGGTTGTTTTTAATTTTGCGTTTTAAGTGTGCGATTATAGTTAATTAATTTTCTTGAATTGGTTTTGTTGGGAAGGGGGTTTGAATTCAATTACGATTGTTTTAATTATGGGTTTTAGGTTTTGGTTTTCCTCACTCCCGTCGTTCTTCGCGAATGCCGTCGCATAATTTCCCAGGGCGAGGTCGTTTTCCCTCTCCTCCTTTTTATCTACATTGTTTCTTTGATTCGTTGATAAAAACTAGGGTTTGGGGTTTCAATTTGTTGGGCAAGGGTTTAAATTTTGAAGCCCGAATTTGTAATGAAAACTCTAATTCTAGTCATTTCTTCTTATTTCGTTGCACTAGTCTGAATATACTAATTGATATGCAAGGTTTTGCACATGAATTGTCAATTAGGTCGTTAGGGGTTAGGAATTGGGATAATTATATCCAAGTTAATTATGGAAGCTCATAAGTAACTTCTCTTATCTATTCATAGTATTCACTTGTCCTGAAACTATCAGCACCACTCCATTAGTGCTCCATCCAAATTTCCAGTGTTGCATAATCAGTCAAAGTTTCTCTTTATGTTTGTCTGGTACACTATTAAGTTCTCTTCATCCCTTCAATGCAGATTTTCTCATACTATTTTTCACAGAGGCTCTCTTCTACTGTGGTGTTGCAATTTTTCTTTTCCTTATTCACTCTCTGCGTAGCCCCGCTAAAAGTGTTCCTGTTGCCAGCAGTTGTGGAAAGCTAACCACTCAGATGGGGAGTCGTATATCTTCAGTTGCTATTTTGATGCTTAGACAGCTTAGTCTTATTATTCCAATGGTGACAATGGTTTTGTTTGGCCGTGGACTGGTCCTGCAGCATCAGCTTCTCTAGCTCCTTACTTGGTTGGTATTGTTGTACAGTTTGCATTCGAGCAGTATGTAAAATATACGAAATCACCTTCCTGGGCCGTCATTCTAGTTGTATTTCAGGTGAAGTACTCTAAAATGTTTCCTTTGATTAGTACAAAGTATTGAACTATAGACTAATATTCTTCCCTTAGCTTGCCTTTTTATACCTTTTGTGAGAAATATACTTGATTTGTGTTTGTAATGTATGTGAGCTTATTGATATTAGTTGCACCAGATTATGGTTCGTTTTCCAAAATTTTTCCTTGATTCGTTTTTTGGGAATTGACGATTAGTGCTTTGACATGAAACATGTATATAGACTGCATCAACTAAATCGAGCCGCACAACTGGTAACTGCTCTATCTTTCACAGTTAGAGGAGCTGAGATTAATGCACACAACTTGGCCAATGGCTGCAGCTAAAGAACCTCCCCCAACTCTGGAAACAACAATGTCCTACTTACAAAAATATCTTAGTGAACGACCCAAATGAAGTACGAAGAATGAAACAACCAGTTTACATACAAAGAAAAGGGTTGCAAGAGCTACTTAGTACTCCATGTTTAGACGGATCAGGAAGTTAACTTAGTACATAGTAATTTGAGTTACTTAGTACTCCATGTTTAGACGGATCAGGAAGTTAACTTAGTACATAGTAATTTGAGTTACTTAGTACTCCATGTTTAGACGGATCAGGAAGTTAACTTAGTACATAGTAATTTGAGTTACTTAGTACTCCATGTTTAGACGGATCAGGAAGTTAACTTAGTTATGTTCTTCTAACAAGAGCCTTATAGGCTGGCTTTGCCATGTTGCAGAGGGACTAGTGAGATTCCCCCCCCCCCCTGCACCCACCCCTTATAGTTTCTTCTGTTAGCATAAAGAAGTTACTTTCTTTTTCAAGCTGGCAGTAGCTTCTTTATGCTGACACAAAAGACAACTATAACCCAATAGTAATCAGTGAGGAGGTTCAGATGCAATGGCAGTTCTGCCACAGCAACTATAACCCAAGCTTGCAGTAGCTTCTTCATTTTTCTCACTTATATATTGTACTGTGAAATTTAACAGAGTAGATTTACACTTTATCTCCCTCAGGCCTCAACAATGATGTTTTATGTTTGTATCGATATTCAAGTGTTGGTTTGTTTTTAAGGGTGAAAAAGTGATACTTTCTTGTTGTAAGTGTAGGTGTGACTCATGTGGGTGGAGACATGTTCAAATTGATTCCTTCTGGTGATGCAATCTTCATGAAGGTACTTCCTCTTCATTGTTTGTTTAGTATACATCCTTACATATTTGTTGCCGTGATTTATAACCTCTTCTGCCTAACATTTAATTGATCAGTCTAAATGCATATAAAGATACGGTGATGCATCAGACCTAAAGGACGTAAAATTTAATGGAAAGAACTAAAAATGAACGTAACTAAGAGAAATGGAGCTTCAGTTAGTTAGAAGTTAGTTAGAAAAGTTTGCCTATAATTTACAGCCAGCTCTTATTTATATTTCCTGGTGAAATGCAGGAAGCTCTTGTTGTTTAGTTATGTTTTAAATCTGACTTAATTTTTTGTTTTGACAACGTAACAAACAACAAAAGGGCTAAAGTATTGCGGTTGTAGCTAGGCTATGGGCCTGAATTAATAAAGAACGACGCACTTTCCTACACAAAATATAATCAAAATTAAGAGTAACAGATCGTATGTCCTTTATTATTATGTGTATCTTCTAGGGTGCTTGTGTTGGATCATAAACGGAAGTGATGATATTGATGCAGTCTGTGATGATTTCTATATGCTTGCAAATAACTCAAAATGGACCTAGTTAACCCAAAAGAACCTCCAAAAGACTCTTTATTTATGTTTACAATTACAATAATAAATAATAATATATCTAACTTAATTTAGATAATCGACTGAAATTGACTTATTAAATATCGTTATATGGTAAGAAGAAGGCGTCTATAAGAAGAGTACCTGGTTTTCAGGTGGTTATCTAGAATTTAGTATCTTTTGCCTTTTTCTGTTCAACTCCTATGTTATCTACCTAGTGTTTCGTAATGTTGATTTTGATTTGTGTATAATTGACCCAGTTTTCCCCTGGTGACCCAAGCAAGTTCATGGTTACTATTGCTGATTCCCAGGTCCGGATACTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAGTTAATGGAAGAATGCAAGGGCATGTTAGTCATTACACTATTGGATGAATAGTGAAAATCAAGTTCTCACTTTTAAAGGTTGTAGGATGAAGGTGCAATTTGTAATTAGTTTTATATTTATTTTTGTTCAGCTTATAGTTAGCCCCCCCTTATAGTTAGTGGCGGAACTAGGACTAGGTTTCATGGTGCTCTTTCCAACCGAGCTTACCAACAGGAGCCTCATGCAGGAATTGGTAAAGAAGTGGAAGTTCTCGTCTGA

mRNA sequence

ATGGTGCTCTTTCCAACCGAGCTTACCAACAGGAGCCTCATGCAGGAATTGGTAAAGAAGTGGAAGTTCTCGTCTGAATTGCCTCTGAAATTAGGAAGGGGAATTTGCATTCGAGCAGTATGTAAAATATACGAAATCACCTTCCTGGGCCGTCATTCTAGTTGTATTTCAGGTGTGACTCATGTGGGTGGAGACATGTTCAAATTGATTCCTTCTGGTGATGCAATCTTCATGAAGTTTTCCCCTGGTGACCCAAGCAAGTTCATGGTTACTATTGCTGATTCCCAGCCCCCCCTTATAGTTAGTGGCGGAACTAGGACTAGGTTTCATGGTGCTCTTTCCAACCGAGCTTACCAACAGGAGCCTCATGCAGGAATTGGTAAAGAAGTGGAAGTTCTCGTCTGA

Coding sequence (CDS)

ATGGTGCTCTTTCCAACCGAGCTTACCAACAGGAGCCTCATGCAGGAATTGGTAAAGAAGTGGAAGTTCTCGTCTGAATTGCCTCTGAAATTAGGAAGGGGAATTTGCATTCGAGCAGTATGTAAAATATACGAAATCACCTTCCTGGGCCGTCATTCTAGTTGTATTTCAGGTGTGACTCATGTGGGTGGAGACATGTTCAAATTGATTCCTTCTGGTGATGCAATCTTCATGAAGTTTTCCCCTGGTGACCCAAGCAAGTTCATGGTTACTATTGCTGATTCCCAGCCCCCCCTTATAGTTAGTGGCGGAACTAGGACTAGGTTTCATGGTGCTCTTTCCAACCGAGCTTACCAACAGGAGCCTCATGCAGGAATTGGTAAAGAAGTGGAAGTTCTCGTCTGA

Protein sequence

MVLFPTELTNRSLMQELVKKWKFSSELPLKLGRGICIRAVCKIYEITFLGRHSSCISGVTHVGGDMFKLIPSGDAIFMKFSPGDPSKFMVTIADSQPPLIVSGGTRTRFHGALSNRAYQQEPHAGIGKEVEVLV
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo14025Spo14025gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo14025.1Spo14025.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14025.1.CDS.5Spo14025.1.CDS.5CDS
Spo14025.1.CDS.4Spo14025.1.CDS.4CDS
Spo14025.1.CDS.3Spo14025.1.CDS.3CDS
Spo14025.1.CDS.2Spo14025.1.CDS.2CDS
Spo14025.1.CDS.1Spo14025.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14025.1.exon.5Spo14025.1.exon.5exon
Spo14025.1.exon.4Spo14025.1.exon.4exon
Spo14025.1.exon.3Spo14025.1.exon.3exon
Spo14025.1.exon.2Spo14025.1.exon.2exon
Spo14025.1.exon.1Spo14025.1.exon.1exon


Homology
[Close]
BLAST of Spo14025.1 vs. NCBI nr
Match: gi|902172613|gb|KNA08151.1| (hypothetical protein SOVF_164990 [Spinacia oleracea])

HSP 1 Score: 66.6 bits (161), Expect = 3.700e-8
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 1 

		  

Query: 66 MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQ 97
          MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQ
Sbjct: 1  MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQ 31
[Close]
BLAST of Spo14025.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNL1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_164990 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.600e-8
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 1 

		  

Query: 66 MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQ 97
          MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQ
Sbjct: 1  MFKLIPSGDAIFMKFSPGDPSKFMVTIADSQ 31
The following BLAST results are available for this feature:
BLAST of Spo14025.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 1
Match NameE-valueIdentityDescription
gi|902172613|gb|KNA08151.1|3.7e-8100.hypothetical protein SOVF_1649... [more]
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BLAST of Spo14025.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0K9QNL1_SPIOL2.6e-8100.Uncharacterized protein OS=Spi... [more]
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BLAST of Spo14025.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14025.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008171 O-methyltransferase activity