Spo14117.1 (mRNA) | SpinachBase

Overview


Name	Spo14117.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	RING-H2 finger protein
Location	SpoScf_01627 : 121077 .. 130142 (-)
Sequence length	1448

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTTTAAGGATAATGTATTGATAAGTGGTCTTTGGATAAAATAAGAGTTTATTGTTGTTTGGTTGAGTTGGCCAGGAATAAGATTTGTATTAGTGGAAAAGTTGTTAAAATTCTCATATTTTCTCCCTATCTCCTTCCTTATCTTTTTCATTAAGCGTAAATTTATCATTTCCTTCCATGTTTTACCCCTTTCTAATTAATATTAGCCCCATAATACTATATTTGAGGGATTGTAGAGGTTTTATCGCTATTCGTATATACCCCTTTTTTCCCTTAATACTTATCATCCCTCTCTCCTAAACAAAAACATAAGATTTTCATCATCTCTTACTCCTCTCATGAAATACAAACCTTTTATCAAATACATTTTGTGCTTTTTACCATCTATAATAGTATGAGTCTAGTTTACATTATTACAACACGATGGAATGAAATGAACAACTTGTATTAAATCGAATATTATTACCAACTCCATTATCCCAATTCCCAAATATAGTGGAAACCAATTAAGGCAAATATTGACAAACAAAATTTTGATGATTGTTATTTCATATTATAAAACAAAATTGCCGCGTGGAAGAAGCTGAGTGAATGACCTAGCTACGGCCTTGATGCTCCGTGAGCTTAGTCACCGCGTTTTTAATTGCAACAATAATAATAAATATAAACAATAATAAAAAAAAAAGCCCGGAAATATAGAAAGAAAAATATAAACATAAAACAAAAAGGAGGAAGAAAAAGATGAACTAAAGTAGACCAGTCTTCCCTTTCCTCGCTCACTATTCATCCTCTCCATATTCCTCTTCCATTTTCTCTCTCCTCTCCACTTTCTCTTTCTAGGGTTTCTATCCTTGAATTTCTTCGCTTTTATTCATTTCTTTCACTTGATTGTCGATCTACTTGAGAATTTCAATTCAAGTTGTTCAGCCGATTATATCGCCCTAGTTTTATCAGTGAATTCATTTCATGGAGGTAAGTTTCATTTTGATTAATTTTCTGGAATGATTCCGAATTTTAGGTTTATATGAGTTTGTATGAGCTTGAATTAGCTGTTTTGAGTTGTAATTATTGTTTATGCTGTTGTGTTTGGATTTGATCGGTTGGCTTGACTTGTGTTTACTTGGATGGATAATTCGAGTTGACTCTTAGGTTTTCTTTGTTGTTTATACGCGGGTATTGTGATTTTGAATCGTTGCAACAGTAATTTGATTTTTAATGTTGAATTTATTAAATTTGCTGAAATTTGGTGATCACGGAGATTTTTTTGGGGTTTTGGACAGGCTCCAGGTATGGAGGATAACAAGAAATTGGAGGAGGCGAAATTAACCTCGGCCGCCGCGTTTGTAGAAGGTGGCATTCAAGACGCTTGTGATGATGCTTGTAGTATTTGCCTCGAGGAGTTCTGTGATAACGATCCTTCGACGGTAATACATTGAGCTTATTCTTGGTCTTTTGGGTTTTTGTTTGAATTTGAACCTACACATTGGTAAATATTTTTTTGTCGCACTTGCAGGTGACGGGATGTAAGCACGAGTTTCATTTGCAGTGTATTCTCGAATGGTAATTTTTTTTTGTGTGTGTGTGTTTTGTTGGGTATTCATTTAGTCCAAAGTTTGTGAATTGAGGAATAATAGCAACTACGGCACGGTTCAATGATTTGACATGAATTAGAAAACTAGGAATTATCTTCTCAGACTTTTCTATTGGATAAAGCTTCCGTTCCTTTTCAGAGGACAGCGGAAGCTATATAATACAGACTCACCAGTTTACCACTTTACCTCACGTACACGTGTCGAACCTCAACACTGTGACAAGGGTGTGGACACTTCGTCACTTTATCTTGGGCCAAAATCATGAAAATTTCCCAAATTAGCCGAGCCATACACTTGAATACGTACCCATGTCCAACACAAACATCTGATTCCGAGTAACAATGTAACATAGATAGGGAGGTTACATTAAGTTTTCCGGTCCATCAAGTTATTGTATTGTTATTACAAAGCCTTACAGCGTAATTATTGATCAACTTGAGAGTTACTCATTTGTGATGATATTAGAAGTACAGTTGTCCGGATGTTTAGTTGATTTTGTTCACCGTTAAATTGTCCTTGTGACGAAATGTAATAGGAAAAGAATTGAACTATGCGTCAAATGTCAGTGATTGAGGATTGGTTCCCCTGCTATCTTTTGTGAGATGGATATTATGTTACCTCCTCTGTGTTTAAGTGAGCATCTAGGAATTGTATACACCTATAAAATCTGTGTCTCTCTCCATCATCATTGTAATTCCATTGCTATGGTAGCAAAGAAATATATTCCATTGCTGGTTGATATTCTCTCAACTAAGTAATGGTTTTAATAATTATTAACGCAAAAACAAGTTATGATAATAACAGAGTAGCACGGAGTTCATTTGTGAGTGTGTTTGTAATCAAGTTTATTGGCCGGTAAAAGTTATTGTGCTATTTGTTTCTGGATAAGAAATTATTCTTGAAGTTGAATATGCAAGGCATGATGAAGTCATCACTGGTTATACATGGATATTTGCTTTGTTTTAGTTCAAGTGGTTGCTACAGACTACGGTGTTTTGACATTAAGTCTTACTTATACCTTACAGGTGCCAGAGGAGTTCTCAGTGCCCAATGTGTTGGCAGCCTATCAATTTGAAGGACCCAACAGGGTTTGCACTATGTCTCTTTGCTGTATTATGCTGTTGCCTGTTGGTTGGTTTTAAAGATTCTAACTGCAAGTTTTTTTTTTCATCGACTCTTTGCAGCCAAGAATTATTAGATGTGGTAGTCCAGGAGAGAAATATCAGGCTTAATCCACCGAGAAATGCAGCAATATTTCACCATCCAGCTTTGGGTAATTTTGAGATACAGCATGTAAGTGGACAGCTTTTTCAATTACCTTGTTGACAATTTATTTCCGTCAACCCTCATTCATATGCATTACAGTTGCCCGTTGGTGTTAATGACGCTGAACTGGAGGAGCGCATTATTCAGCACTTAGCTGCTGCTGCTGCAATGGGCCGAGCACGCCATTTTGCTAGAAGAGAAGGCCATAGGGGAAGATCTTCAAATCAAGGTCGTCCACATTTTCTGGTGTTCTCAGCTCAGCCTGATGCCCAGGCTGAATCTGCCTCTCTTCCTGAAGGAGGGCAAACTGAATCTACCCCAGCCAATTCAGTTACACCTTCGTTGCTCAGAATTGGAGGAGAATCATCACCACATCAATCCTCACCTAATTATTCAAGCCACACGGATATGCTTTCTGCCTCTGGAACTAGTGCCTTTTCTGCTGGTCGTGCATCACCCTCAGACAGTGGGTTAGTACTGCAGTTTCCTCAGTATATGAATATTTGTCCCCCATAAAACAAGATTATAAATGAAAGGAAAAGTCAAACTGATCTGTTTGTGCTATATGTGTTCTTTCACATATAGCACAAACAGATCAGTTTGACTTTTGGGAGAATCGTCACCTATTACTCCACCGCTTTTAACTCGGTCATTATAAATTAATATATGTGTTCTTTCACATTCTTGTAGGAGTTCTCCCAGTCAATCATCTCCAAGAAGTCAAGATAGAGCAGGTCCATCTGATCTCCAAACTTTTTCAGAAACTCTGAAGTCTCGGCTTAATTCAATGTCTACGAGGTACTAAACATGTGAAAATGTCCGGCGACCTCCAAAATTGATGTCATTATAGCAATGTTGCATATGATGTCTTTTTTAAATTGTTGATCTTAAAAATGTCTTTGATCTTGTGAAAAGGTACAAAGAGTCTATATCAAAGAGCACAAGAGGGTGGAAGGAAAGATGGTTTTCCCGCAACTCTCCTATGTCTGATATTGGTTCTGAAGTAAGGAGAGAGGTCAATGCTGGAATTGCAACCGTTTCCAGGATGATGGAGCGTATGGAAACCAGGGACGATGGAATACCCAGCAATGATTCTGTACCTGATAGTTCTGAGAGCAGTCAAGCCCGTGACCCTGTCCCACATGAGGCTGACTCTGTTGTGTCTCCAGGAGAAAATCATTTGAGTGGCAACAGGACACAAGCACCATGTGCTGCACATTCCGGTTCCGACTGAGCATAATGTTGGCCATTGCATCAAGTCATAGCGTTTAGTGTTGAAGGTTAGTCCTGGAGCCAAAATAATTTTATTCTCTTTAGAGAGCTGCATATAAAAGAGTTGCCTCTTAGAAATGTGTGCATGGTTGTCATTCTTCACTTTTTGTGGTACTTTTTATTTGAGATAATTGAAGACTTATTTACCGGAATCCAGTGTTAAATACTGGACTTACGTACAGCAAATATACAAGTTATTTAAACATGCAGCGTTTAGTCTTCCATAAATTGTCTGTTATGCTGAATGGCAAAGAGAAAGGGAGAGGCATAAGTGTTCTTGTAGCCTTTCCCGATAAGAAGGCCCCTTCGATACTCAAAGATGGGTTTCCTGTACTCTAGTTATACCGTGTGCTTCCTTCTGTGAACTATATTACTATGGTCGTAGAATCCATTTTCTTCGTAAATTTGAAGTCTGTTTCAGGATTACGAATAGATTATGATATGTTCTATGTGAACTGTGCAAAAGGATACAAGTGCTTGCACTGTCTGCTTCCGTGTTTTAAGAAATGACTTGCGGCTTCTTGCGTGGAGGGTTTCTCTGGAAAAATGTGAAGAATAGGGTAAATTTCCTTTTCGGGCTTGGGGTTGGGTGGGGAGGGGGGTTGGAAGAGAAGGGTGCGCATCAGGATCAAGAAAGAGAATTTACTGCATGGGTGAGTAGGGGGTGTATGCTGCTTGCTACAGAAGCACAGAATGCGATGCTTGAATGGTGGAACCTGCTCATAATATCCGCCTTGTTCATTTTCCATGCCCGTCTCTTGGTCTTTGTTTGTAAAGACTATCAATGATTTGAGATCTGCAGAACATCAGAGGACTATCGATCTATCTTTACTGGCCAAAAGCTACTAAAGCTTCACCTTCTGAACGTATGCTAGCTTTCAAGCCTACTTATCTTCTGCTCTTGTGCTTAGACTTTCTATATCTCCGTCATAATCTATCAAAATATTTATTATACATAAGTCTATTAAAATAATTTTAAATAATTTAGCAATAATTTTGGGAAATTTGAAGATTTGGAGGGGTACTTAATAAAGATTTAAATGCTCATTTCCGGAGTGAGAGCGACTTTAGGTTTTAAAAACAATGGATTATTAAGAGGTGATGGCAATGTGGGATGGTATGGCCTTGTAATGATTTGGCTGTGCAAAGTGGTAGTCTCGACGTTAAATTTATCGAAAGTAGGTTCTGGTAAATGCAAAGTTCACTTTTGGAAGGTTGGAAGTAGTAATATTGAGTAGGGAGAGCGTTTGGGATTATCCATGTCAAGTACTACCTCCGTTCCCAAAAGTTCTTTACTCCTTGGAATATGTGTTTCAAAGTATGAAAACTTTGACCGCATATTCTCACTGTTACATACATTACAACGTTATCATGTAAGATCTTGTTAGATTAGTCTTGTTATGTATTTTCATAATATTAACTTTTTATTCACATACAAAATTGGATATATAAGTGGTTAAATATTGCATTGGAGTCTGTGCAAATAGTAAGCGTAAATAACATTAATGAACGGAGGTAGTAAGAGTTAAATTTCTCAATGAGGTGAAACTGGAGTGGTGAAATTTTTCTCTTGTTGTATTGTTTGTTTTTTTAAGCATGGAACCTTGCTTCTTAATTATGGTGAAACGTTGCATCTAAATTATGATATTCTTTTTTATTTTCTTACTATAGTGTCAAGGTTATGCAATTCCACATCACTACCTGCGTTCCTAAAAGAGTTTAGAATCTATGAAGGTCCCAATGAAGTGTAATTTAACACTCAATAAATATATAAGAAAAAACATACTTGTTGGATCTTGTGTTATTCGTCTCGATGTGTAGTTTCAAAATATCCAACTTTTAATTCTTTATAATACGTATCTATAGATATTGTTACTCAAAATATGCATTAGAAACTGTGTGAAGAGGCAAATGAGAATTTCATTTAGGGACTGAGGTAGTATTAACTTTTGAAAAACATGATCAATTTTTGAGGAACCAGGTGTTGAATATATGAAACCACCTGTTACATCATCTCTATCGAAAGAACTACTTGCTGGTAACAATGTAAAATACACTAAATATACATTGTATTATACTTCCTTTGTTTCACAATAGATGCATTATTTTGATTTTCTATACTATTTATATATTAATTGACCATCAATATCTTTAATTACATATTAATAAAATTTATAAAAATTAGATATTTTGAAAAATATATTGAGATTAACCCATTAACAATAAAAAAAAACCCGGAGGAAGTATTAGTCTTCATGGGAGTTGTATATGAGATTTCTTTTCTCCAAAAAGTTATTTCCCGAATTGCAATCCATTGCCTCATACATATAGATATGCCACAGATTTCCATAACTTTGTCGATTTGCCCTCACATTTTGGTGACAATGTACATTGAGAAGTTGGGCTGACCTGAATTAAGGAAAACTGTTAGTATTTGGGAGTATTAGTTCTTATTATAGCTCACTTCATGATTAACTTCCTAGAAAATGTAAATCAGAAGGCTTAGTGCTCTTTGGAAAGAGCACCCCTTCCGTTGGTGAGCTTGTAAATGGGTAATAGTCAATATCTAAAGATTCTTGTTGATCTGATATCGGTGGTGTCAAAGCTCGTCAATGGTATGTTAGAAGTTAATTCTCTGATTTGAGTAAGCAGTGATGTCGGGTGGATCGATGGAATGAACTAGAATAGGGATGGAGAGGAACATAATTGACCAGCTCTCATTGTATAGTGGTTTTGATCTCCCAATGTTTCCTTGGTCCTCACTCTTCACTATAGCGCATCATCATCACGACCAGGTGCTGCAGGCTTATAGGTACTAGTACTACAACACCACCTGCCCAAATGCCCAATTCACCGCCACTTACCCTCATCCTGCTACTATACAAGTAACTGAGCAAGGGTTCATCACGAGAAGAGAGAAAAATAAAGCACAGACAACCATTTAGTTTTTGTGAAGGATTCTCAAGATTGCACTTTTTAGTTTTTGAGGTTGGCTTCCAAGTTTTTTAATCAAATTTGGCCATCTAATGGTTGGATCTATCCGCCCATGGGAGTTATGGGTTTTTGGAGATTGAGGTGGAGGCTTTTTGTTGGCGGAAGGCAAATGAGCCTTGCCTACTGTGGATAGAGGGTCGGAGGGTGGTTTGGGACAACGTTACCTAATTCTCTAAGCATCCCACGAACCGCGAACCTTAAAAGCGAATTATAACACGAAGTTAGTCTAATTTAGCAAATTAGGAAGCGAATTGCGAACCCGTATCCAGTCTCATACTAGCGAACCAGGTAACAGTTGGATGGGAGATGCAAGGAGATTATAGTAATGGGGTTTTAGTTTGATAACTAAACAAACATTAAAATATTGATCCGTACCAAAATGTAATGAAGTAATTTTAAATCCTTTTTTTCCTTACCCTTGTTTGAAATTATTCCTCTCTTTTCCTTCATTGAATAAAACAACCCCTTAGTCTTATGAAAATGATAATAGGTGTGCCCTTCTACTTCTGGAAGAATTAGCATTTATTTTATAGTTTTTCCACTTTCTGGTTTCTGACATCACAATTGCCTTTCTCTACTCCTGGTTGTTTATCTTTTGCCCGGAAAATGATGGGACTTCATTCTTAAAAGGTTATTGTGATTGGATGATTTCAATAATCTAGGGGTGTATCTGACATTGGTTGTAAAAGAGTTACTCCGTAATAAGGCAATATGATCCAAGCAGTCAAGCAGTACCTTCCTGGATCTGTAAGGTAATTTTGAACCATCAGCTTGAGACAGATTCAGAAAATCAGGTGGTTTATTTTTACTACGAGTACATCGCCAATGGAGCTTGGACATAGGAATCTCAAAAGACTAAATGTTAGGTCTATCAAGTGCATTCTGTTCTGTAGGTTTCTTAATAAGTCTTCTTTATCCATGATTGTTAGGCCGGTTGATGGCACTGAGGCAGTAAATATCATGGAGTGTGGTATTGGCGTTTTGCCTATGTTTCATTCTTCTCCTTTGAGCCCATTGTCACTCCCTTGCTGGTCTAGATTCTTCTATCATTTTATCTAAGGAAGGAAACGCAGGACACATGCTGGCTGAGGCCATATATAATTATATATATCTTTTGCTACCCCTAAAATTAGATTGAGGTAGTCGAGCTTTCTAGAAAGTGGTTGTCGACTCGTCGTGACTCGTGAGGTAGTTGTACAAAAAGTGCCCTTCACAGGCTCAATTGATTTTGGATGGGATATCTAATCTGAAATTTTGCAGTATTAATTCAATTAGTGATTTATCAGTTTTCCGATTCCCGGCTTATATTTGGATGTGTACAGGATACTGGATATCCGTTTAATATCCGAATATTAACTGTGTTTTAGCTGTGTTATGGTTATGATCATGTATTTGTTTGTTGGGTGTATCACATTTATTGATCCCCATAATATACAAAGTGTAATTTGTGTGTTCAATTTTGCCTTTTATTGTGTGTGGAAAGTTCAATCAGAAAATTGCTGAAATTCCAACAGGCGAATAATACAGAAGCAATGTATATTAATTTGATATTTGATACCTGATATAATTCAATCCAGAAATATAGGATCCAATACAAAAACTGGGTTTGCAGATGATCCTTGGACTAGGTGTTTAAGCTTTTGCGATCAACTAATAGTTGACATTGTCTTATCCTAAACTGATGATCTTATTTTTGTTTCAGATAGAGTGCCTTGCAATTAGGTGGATGCTGTGATTTTGATGCTTTTGCCTCCATAGCAGCAGACTAGTAGGTAATGGAAAATGTCATTTGTAATTGTTATCCGAAGATAATAAAATAACTTAGAGATTTATGTGAGCTTGTTAAACGTGGTACTTGGGGGTTACCTGATTGTAAATTATATGTTTGTATTTCAACATTAATTATGAAAATATTTGCTGGCCGTGCACTACTTCAG

mRNA sequence

ATGAAGGCTCCAGGTATGGAGGATAACAAGAAATTGGAGGAGGCGAAATTAACCTCGGCCGCCGCGTTTGTAGAAGGTGGCATTCAAGACGCTTGTGATGATGCTTGTAGTATTTGCCTCGAGGAGTTCTGTGATAACGATCCTTCGACGGTGACGGGATGTAAGCACGAGTTTCATTTGCAGTGTATTCTCGAATGGTGCCAGAGGAGTTCTCAGTGCCCAATGTGTTGGCAGCCTATCAATTTGAAGGACCCAACAGGCCAAGAATTATTAGATGTGGTAGTCCAGGAGAGAAATATCAGGCTTAATCCACCGAGAAATGCAGCAATATTTCACCATCCAGCTTTGGGTAATTTTGAGATACAGCATTTGCCCGTTGGTGTTAATGACGCTGAACTGGAGGAGCGCATTATTCAGCACTTAGCTGCTGCTGCTGCAATGGGCCGAGCACGCCATTTTGCTAGAAGAGAAGGCCATAGGGGAAGATCTTCAAATCAAGGTCGTCCACATTTTCTGGTGTTCTCAGCTCAGCCTGATGCCCAGGCTGAATCTGCCTCTCTTCCTGAAGGAGGGCAAACTGAATCTACCCCAGCCAATTCAGTTACACCTTCGTTGCTCAGAATTGGAGGAGAATCATCACCACATCAATCCTCACCTAATTATTCAAGCCACACGGATATGCTTTCTGCCTCTGGAACTAGTGCCTTTTCTGCTGGTCGTGCATCACCCTCAGACAGTGGGAGTTCTCCCAGTCAATCATCTCCAAGAAGTCAAGATAGAGCAGGTCCATCTGATCTCCAAACTTTTTCAGAAACTCTGAAGTCTCGGCTTAATTCAATGTCTACGAGGTACAAAGAGTCTATATCAAAGAGCACAAGAGGGTGGAAGGAAAGATGGTTTTCCCGCAACTCTCCTATGTCTGATATTGGTTCTGAAGTAAGGAGAGAGGTCAATGCTGGAATTGCAACCGTTTCCAGGATGATGGAGCGTATGGAAACCAGGGACGATGGAATACCCAGCAATGATTCTGTACCTGATAGTTCTGAGAGCAGTCAAGCCCGTGACCCTGTCCCACATGAGGCTGACTCTGTTGTGTCTCCAGGAGAAAATCATTTGAGTGGCAACAGGACACAAGCACCATGTGCTGCACATTCCGGTTCCGACTGAGCATAATGTTGGCCATTGCATCAAGTCATAGCGTTTAGTGTTGAAGATAGAGTGCCTTGCAATTAGGTGGATGCTGTGATTTTGATGCTTTTGCCTCCATAGCAGCAGACTAGTAGGTAATGGAAAATGTCATTTGTAATTGTTATCCGAAGATAATAAAATAACTTAGAGATTTATGTGAGCTTGTTAAACGTGGTACTTGGGGGTTACCTGATTGTAAATTATATGTTTGTATTTCAACATTAATTATGAAAATATTTGCTGGCCGTGCACTACTTCAG

Coding sequence (CDS)

ATGAAGGCTCCAGGTATGGAGGATAACAAGAAATTGGAGGAGGCGAAATTAACCTCGGCCGCCGCGTTTGTAGAAGGTGGCATTCAAGACGCTTGTGATGATGCTTGTAGTATTTGCCTCGAGGAGTTCTGTGATAACGATCCTTCGACGGTGACGGGATGTAAGCACGAGTTTCATTTGCAGTGTATTCTCGAATGGTGCCAGAGGAGTTCTCAGTGCCCAATGTGTTGGCAGCCTATCAATTTGAAGGACCCAACAGGCCAAGAATTATTAGATGTGGTAGTCCAGGAGAGAAATATCAGGCTTAATCCACCGAGAAATGCAGCAATATTTCACCATCCAGCTTTGGGTAATTTTGAGATACAGCATTTGCCCGTTGGTGTTAATGACGCTGAACTGGAGGAGCGCATTATTCAGCACTTAGCTGCTGCTGCTGCAATGGGCCGAGCACGCCATTTTGCTAGAAGAGAAGGCCATAGGGGAAGATCTTCAAATCAAGGTCGTCCACATTTTCTGGTGTTCTCAGCTCAGCCTGATGCCCAGGCTGAATCTGCCTCTCTTCCTGAAGGAGGGCAAACTGAATCTACCCCAGCCAATTCAGTTACACCTTCGTTGCTCAGAATTGGAGGAGAATCATCACCACATCAATCCTCACCTAATTATTCAAGCCACACGGATATGCTTTCTGCCTCTGGAACTAGTGCCTTTTCTGCTGGTCGTGCATCACCCTCAGACAGTGGGAGTTCTCCCAGTCAATCATCTCCAAGAAGTCAAGATAGAGCAGGTCCATCTGATCTCCAAACTTTTTCAGAAACTCTGAAGTCTCGGCTTAATTCAATGTCTACGAGGTACAAAGAGTCTATATCAAAGAGCACAAGAGGGTGGAAGGAAAGATGGTTTTCCCGCAACTCTCCTATGTCTGATATTGGTTCTGAAGTAAGGAGAGAGGTCAATGCTGGAATTGCAACCGTTTCCAGGATGATGGAGCGTATGGAAACCAGGGACGATGGAATACCCAGCAATGATTCTGTACCTGATAGTTCTGAGAGCAGTCAAGCCCGTGACCCTGTCCCACATGAGGCTGACTCTGTTGTGTCTCCAGGAGAAAATCATTTGAGTGGCAACAGGACACAAGCACCATGTGCTGCACATTCCGGTTCCGACTGA

Protein sequence

MKAPGMEDNKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPINLKDPTGQELLDVVVQERNIRLNPPRNAAIFHHPALGNFEIQHLPVGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDAQAESASLPEGGQTESTPANSVTPSLLRIGGESSPHQSSPNYSSHTDMLSASGTSAFSAGRASPSDSGSSPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGWKERWFSRNSPMSDIGSEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPDSSESSQARDPVPHEADSVVSPGENHLSGNRTQAPCAAHSGSD

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo14117	Spo14117	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo14117.1	Spo14117.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14117.1.CDS.8	Spo14117.1.CDS.8	CDS
Spo14117.1.CDS.7	Spo14117.1.CDS.7	CDS
Spo14117.1.CDS.6	Spo14117.1.CDS.6	CDS
Spo14117.1.CDS.5	Spo14117.1.CDS.5	CDS
Spo14117.1.CDS.4	Spo14117.1.CDS.4	CDS
Spo14117.1.CDS.3	Spo14117.1.CDS.3	CDS
Spo14117.1.CDS.2	Spo14117.1.CDS.2	CDS
Spo14117.1.CDS.1	Spo14117.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14117.1.utr3p.2	Spo14117.1.utr3p.2	three_prime_UTR
Spo14117.1.utr3p.1	Spo14117.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14117.1.exon.9	Spo14117.1.exon.9	exon
Spo14117.1.exon.8	Spo14117.1.exon.8	exon
Spo14117.1.exon.7	Spo14117.1.exon.7	exon
Spo14117.1.exon.6	Spo14117.1.exon.6	exon
Spo14117.1.exon.5	Spo14117.1.exon.5	exon
Spo14117.1.exon.4	Spo14117.1.exon.4	exon
Spo14117.1.exon.3	Spo14117.1.exon.3	exon
Spo14117.1.exon.2	Spo14117.1.exon.2	exon
Spo14117.1.exon.1	Spo14117.1.exon.1	exon

Homology

[Close]

BLAST of Spo14117.1 vs. NCBI nr
Match: gi|902207277|gb|KNA15665.1| (hypothetical protein SOVF_096140 [Spinacia oleracea])

HSP 1 Score: 753.8 bits (1945), Expect = 1.500e-214
Identity = 386/388 (99.48%), Postives = 387/388 (99.74%), Query Frame = 1


		  
Query: 1   MKAPGMEDNKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHL 60
           M+APGMEDNKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHL
Sbjct: 1   MEAPGMEDNKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHL 60

Query: 61  QCILEWCQRSSQCPMCWQPINLKDPTGQELLDVVVQERNIRLNPPRNAAIFHHPALGNFE 120
           QCILEWCQRSSQCPMCWQPINLKDPTGQELLD VVQERNIRLNPPRNAAIFHHPALGNFE
Sbjct: 61  QCILEWCQRSSQCPMCWQPINLKDPTGQELLDAVVQERNIRLNPPRNAAIFHHPALGNFE 120

Query: 121 IQHLPVGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDA 180
           IQHLPVGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDA
Sbjct: 121 IQHLPVGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDA 180

Query: 181 QAESASLPEGGQTESTPANSVTPSLLRIGGESSPHQSSPNYSSHTDMLSASGTSAFSAGR 240
           QAESASLPEGGQTESTPANSVTPSLLRIGGESSPHQSSPNYSSHTDMLSASGTSAFSAGR
Sbjct: 181 QAESASLPEGGQTESTPANSVTPSLLRIGGESSPHQSSPNYSSHTDMLSASGTSAFSAGR 240

Query: 241 ASPSDSGSSPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGWKERWF 300
           ASPSDSGSSPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGWKERWF
Sbjct: 241 ASPSDSGSSPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGWKERWF 300

Query: 301 SRNSPMSDIGSEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPDSSESSQARDPVPHE 360
           SRNSPMSDIGSEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPDSSESSQARDPVPHE
Sbjct: 301 SRNSPMSDIGSEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPDSSESSQARDPVPHE 360

Query: 361 ADSVVSPGENHLSGNRTQAPCAAHSGSD 389
           ADSVVSPGENHLSGNRTQAPCAAHSGSD
Sbjct: 361 ADSVVSPGENHLSGNRTQAPCAAHSGSD 388

[Close]

BLAST of Spo14117.1 vs. NCBI nr
Match: gi|731348417|ref|XP_010685476.1| (PREDICTED: E3 ubiquitin-protein ligase RHF2A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 625.2 bits (1611), Expect = 7.800e-176
Identity = 328/387 (84.75%), Postives = 347/387 (89.66%), Query Frame = 1


		  
Query: 4   PGMEDNKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHLQCI 63
           P ME+NKKLEEAKLTSAAAFVEGGIQ+ACDDACSICLEEFCD+DPSTVTGCKHEFHLQCI
Sbjct: 6   PSMEENKKLEEAKLTSAAAFVEGGIQEACDDACSICLEEFCDSDPSTVTGCKHEFHLQCI 65

Query: 64  LEWCQRSSQCPMCWQPINLKDPTGQELLDVVVQERNIRLNPPRNAAIFHHPALGNFEIQH 123
           LEWCQRSSQCPMCWQPI+LKDPT QELLD VVQERN+RLNPPRNAAIFHHPALGNFEIQH
Sbjct: 66  LEWCQRSSQCPMCWQPISLKDPTSQELLDGVVQERNLRLNPPRNAAIFHHPALGNFEIQH 125

Query: 124 LPVGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDAQAE 183
           LPVGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSS Q RP FLVFS   + ++ 
Sbjct: 126 LPVGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSTQSRPQFLVFSGHSNGESG 185

Query: 184 SASLPEGGQTESTPANS-VTPSLLRIGGESSPHQSSPNYSSHTDMLSASGTSAFSAGRAS 243
             SLPE GQ E  PA+S VTPSLLRIGGE SP+ S P++SSHTDM+ ASGTSA SAG AS
Sbjct: 186 PVSLPEEGQAEPPPASSLVTPSLLRIGGEESPYLSLPSHSSHTDMVYASGTSAISAGHAS 245

Query: 244 PSDSGSSPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGWKERWFSR 303
           PSDSG SP+QSSPRSQDRAGPSDLQ+FSE LKSRLN++STRYKESISKSTRGWKERWFSR
Sbjct: 246 PSDSGRSPNQSSPRSQDRAGPSDLQSFSEALKSRLNAVSTRYKESISKSTRGWKERWFSR 305

Query: 304 NSPMSDIGSEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPDSSESSQARDPVPHE-A 363
           NSPMSDIGSEVRREVNAGIATVSRMMERMETRDD  P+ND+V DSSESSQA DPV    A
Sbjct: 306 NSPMSDIGSEVRREVNAGIATVSRMMERMETRDDERPNNDTVIDSSESSQAHDPVTQNGA 365

Query: 364 DSVVSPGENHLSGNRTQAPCAAHSGSD 389
            SVV  GENH   NRTQAPCAAHSGSD
Sbjct: 366 GSVVGSGENHAGDNRTQAPCAAHSGSD 392

[Close]

BLAST of Spo14117.1 vs. NCBI nr
Match: gi|870853097|gb|KMT04978.1| (hypothetical protein BVRB_7g171410 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 622.5 bits (1604), Expect = 5.100e-175
Identity = 327/385 (84.94%), Postives = 346/385 (89.87%), Query Frame = 1


		  
Query: 6   MEDNKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHLQCILE 65
           ME+NKKLEEAKLTSAAAFVEGGIQ+ACDDACSICLEEFCD+DPSTVTGCKHEFHLQCILE
Sbjct: 1   MEENKKLEEAKLTSAAAFVEGGIQEACDDACSICLEEFCDSDPSTVTGCKHEFHLQCILE 60

Query: 66  WCQRSSQCPMCWQPINLKDPTGQELLDVVVQERNIRLNPPRNAAIFHHPALGNFEIQHLP 125
           WCQRSSQCPMCWQPI+LKDPT QELLD VVQERN+RLNPPRNAAIFHHPALGNFEIQHLP
Sbjct: 61  WCQRSSQCPMCWQPISLKDPTSQELLDGVVQERNLRLNPPRNAAIFHHPALGNFEIQHLP 120

Query: 126 VGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDAQAESA 185
           VGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSS Q RP FLVFS   + ++   
Sbjct: 121 VGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSTQSRPQFLVFSGHSNGESGPV 180

Query: 186 SLPEGGQTESTPANS-VTPSLLRIGGESSPHQSSPNYSSHTDMLSASGTSAFSAGRASPS 245
           SLPE GQ E  PA+S VTPSLLRIGGE SP+ S P++SSHTDM+ ASGTSA SAG ASPS
Sbjct: 181 SLPEEGQAEPPPASSLVTPSLLRIGGEESPYLSLPSHSSHTDMVYASGTSAISAGHASPS 240

Query: 246 DSGSSPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGWKERWFSRNS 305
           DSG SP+QSSPRSQDRAGPSDLQ+FSE LKSRLN++STRYKESISKSTRGWKERWFSRNS
Sbjct: 241 DSGRSPNQSSPRSQDRAGPSDLQSFSEALKSRLNAVSTRYKESISKSTRGWKERWFSRNS 300

Query: 306 PMSDIGSEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPDSSESSQARDPVPHE-ADS 365
           PMSDIGSEVRREVNAGIATVSRMMERMETRDD  P+ND+V DSSESSQA DPV    A S
Sbjct: 301 PMSDIGSEVRREVNAGIATVSRMMERMETRDDERPNNDTVIDSSESSQAHDPVTQNGAGS 360

Query: 366 VVSPGENHLSGNRTQAPCAAHSGSD 389
           VV  GENH   NRTQAPCAAHSGSD
Sbjct: 361 VVGSGENHAGDNRTQAPCAAHSGSD 385

[Close]

BLAST of Spo14117.1 vs. NCBI nr
Match: gi|658049290|ref|XP_008360334.1| (PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Malus domestica])

HSP 1 Score: 455.7 bits (1171), Expect = 8.200e-125
Identity = 255/395 (64.56%), Postives = 306/395 (77.47%), Query Frame = 1


		  
Query: 1   MKAPGMEDNKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHL 60
           M+APG E+  K  +A LTSAAAFVEGGIQ+ACDDACSICLE FCDNDPST+TGCKHEFHL
Sbjct: 1   MEAPGREETNK-SDAHLTSAAAFVEGGIQEACDDACSICLEAFCDNDPSTLTGCKHEFHL 60

Query: 61  QCILEWCQRSSQCPMCWQPINLKDPTGQELLDVVVQERNIRLNPPRNAAIFHHPALGNFE 120
           QCILEWCQRSSQCPMCWQPI+LKDPTGQELL+ V QER+IR NPPRN  IFHHP LG+FE
Sbjct: 61  QCILEWCQRSSQCPMCWQPISLKDPTGQELLEAVEQERSIRSNPPRNTTIFHHPTLGDFE 120

Query: 121 IQHLPVGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDA 180
           +QHLP+GVNDAELEERIIQHLAAAAAMGRARH ARREG R RSS QGRP +LVFS  P+A
Sbjct: 121 LQHLPMGVNDAELEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPQYLVFSTNPNA 180

Query: 181 -QAESASLPEG-GQTESTPANSVTPSLLRIGGESSPHQSSPNYSSHTDMLSASGTSAFSA 240
            QA ++S P+  G+ E +P+ +VT     +  E S   ++P +SS +  +SAS + + ++
Sbjct: 181 PQAHASSSPDQMGEGEPSPSIAVTFPSPPMNREESSQVTTPVHSSQSGSVSASASGSSNS 240

Query: 241 G---RASPSDSGSSPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGW 300
               + S   +  SPSQSSP +QDRAGPSDLQ+FSE+LKSR N++STRYKESISKSTRGW
Sbjct: 241 ALNQQGSSMSNRRSPSQSSPSTQDRAGPSDLQSFSESLKSRFNAVSTRYKESISKSTRGW 300

Query: 301 KERWFSRNSPMSDIGSEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPDSSESSQARD 360
           KER FSRN+ M+D+GSEV+REVNAGIATVSRMMER+ET+DD   +  SV +S +S     
Sbjct: 301 KERLFSRNASMADLGSEVKREVNAGIATVSRMMERLETKDDNTINEASVSNSLDS----- 360

Query: 361 PVPHEADSVVS--PGENHLSGNRTQAPCAAHSGSD 389
           PV    +  +S   GEN L+ +   A CAA S S+
Sbjct: 361 PVSESDNRRISEGDGENSLNDHNRPAACAAGSSSN 389

[Close]

BLAST of Spo14117.1 vs. NCBI nr
Match: gi|694407758|ref|XP_009378604.1| (PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Pyrus x bretschneideri])

HSP 1 Score: 450.3 bits (1157), Expect = 3.500e-123
Identity = 251/393 (63.87%), Postives = 303/393 (77.10%), Query Frame = 1


		  
Query: 3   APGMEDNKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHLQC 62
           APG E+   + +A LTSAAAFVEGGIQ+ACDDACSICLE FCDNDPST+TGCKHEFHLQC
Sbjct: 4   APGGEETN-ISDAHLTSAAAFVEGGIQEACDDACSICLEAFCDNDPSTLTGCKHEFHLQC 63

Query: 63  ILEWCQRSSQCPMCWQPINLKDPTGQELLDVVVQERNIRLNPPRNAAIFHHPALGNFEIQ 122
           ILEWCQRSSQCPMCWQPI+LKDPTGQELL+ V QER+IR NPPRN  IFHHP LG+FE+Q
Sbjct: 64  ILEWCQRSSQCPMCWQPISLKDPTGQELLEAVEQERSIRSNPPRNTTIFHHPTLGDFELQ 123

Query: 123 HLPVGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDA-Q 182
           HLP+GVNDAELEERIIQHLAAAAAMGRARH ARREG R RSS QGRP +LVFS  P+A Q
Sbjct: 124 HLPMGVNDAELEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPQYLVFSTNPNAPQ 183

Query: 183 AESASLPEG-GQTESTPANSVTPSLLRIGGESSPHQSSPNYSSHTDMLSASGTSAFSAG- 242
           A ++S P+  G+ E +P+ +VT     +  E S   ++P +SS +  +SAS + + ++  
Sbjct: 184 AHASSSPDQMGEVEPSPSIAVTFPSPPMNREESSQATTPVHSSQSGSVSASASGSSNSAL 243

Query: 243 --RASPSDSGSSPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGWKE 302
             + S   +  SPSQSSP +QDRAGPSDLQ+FSE+LKSR N++STRYKESISKSTRGWKE
Sbjct: 244 NQQGSSMSNRRSPSQSSPSTQDRAGPSDLQSFSESLKSRFNAVSTRYKESISKSTRGWKE 303

Query: 303 RWFSRNSPMSDIGSEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPDSSESSQARDPV 362
           R FSRN+ M+D+GSEV+REVNAGIATVSRMMER+ET+DD   +  SV +S +S     PV
Sbjct: 304 RLFSRNASMADLGSEVKREVNAGIATVSRMMERLETKDDNTINEASVSNSLDS-----PV 363

Query: 363 PHEADSVVSP--GENHLSGNRTQAPCAAHSGSD 389
               +  +S   GEN ++ +   A C A S S+
Sbjct: 364 SESDNRRISERGGENSVNDHNRLAACTAGSSSN 390

[Close]

BLAST of Spo14117.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R859_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_096140 PE=4 SV=1)

HSP 1 Score: 753.8 bits (1945), Expect = 1.000e-214
Identity = 386/388 (99.48%), Postives = 387/388 (99.74%), Query Frame = 1


		  
Query: 1   MKAPGMEDNKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHL 60
           M+APGMEDNKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHL
Sbjct: 1   MEAPGMEDNKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHL 60

Query: 61  QCILEWCQRSSQCPMCWQPINLKDPTGQELLDVVVQERNIRLNPPRNAAIFHHPALGNFE 120
           QCILEWCQRSSQCPMCWQPINLKDPTGQELLD VVQERNIRLNPPRNAAIFHHPALGNFE
Sbjct: 61  QCILEWCQRSSQCPMCWQPINLKDPTGQELLDAVVQERNIRLNPPRNAAIFHHPALGNFE 120

Query: 121 IQHLPVGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDA 180
           IQHLPVGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDA
Sbjct: 121 IQHLPVGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDA 180

Query: 181 QAESASLPEGGQTESTPANSVTPSLLRIGGESSPHQSSPNYSSHTDMLSASGTSAFSAGR 240
           QAESASLPEGGQTESTPANSVTPSLLRIGGESSPHQSSPNYSSHTDMLSASGTSAFSAGR
Sbjct: 181 QAESASLPEGGQTESTPANSVTPSLLRIGGESSPHQSSPNYSSHTDMLSASGTSAFSAGR 240

Query: 241 ASPSDSGSSPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGWKERWF 300
           ASPSDSGSSPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGWKERWF
Sbjct: 241 ASPSDSGSSPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGWKERWF 300

Query: 301 SRNSPMSDIGSEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPDSSESSQARDPVPHE 360
           SRNSPMSDIGSEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPDSSESSQARDPVPHE
Sbjct: 301 SRNSPMSDIGSEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPDSSESSQARDPVPHE 360

Query: 361 ADSVVSPGENHLSGNRTQAPCAAHSGSD 389
           ADSVVSPGENHLSGNRTQAPCAAHSGSD
Sbjct: 361 ADSVVSPGENHLSGNRTQAPCAAHSGSD 388

[Close]

BLAST of Spo14117.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BYD6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g171410 PE=4 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 3.500e-175
Identity = 327/385 (84.94%), Postives = 346/385 (89.87%), Query Frame = 1


		  
Query: 6   MEDNKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHLQCILE 65
           ME+NKKLEEAKLTSAAAFVEGGIQ+ACDDACSICLEEFCD+DPSTVTGCKHEFHLQCILE
Sbjct: 1   MEENKKLEEAKLTSAAAFVEGGIQEACDDACSICLEEFCDSDPSTVTGCKHEFHLQCILE 60

Query: 66  WCQRSSQCPMCWQPINLKDPTGQELLDVVVQERNIRLNPPRNAAIFHHPALGNFEIQHLP 125
           WCQRSSQCPMCWQPI+LKDPT QELLD VVQERN+RLNPPRNAAIFHHPALGNFEIQHLP
Sbjct: 61  WCQRSSQCPMCWQPISLKDPTSQELLDGVVQERNLRLNPPRNAAIFHHPALGNFEIQHLP 120

Query: 126 VGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDAQAESA 185
           VGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSS Q RP FLVFS   + ++   
Sbjct: 121 VGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSTQSRPQFLVFSGHSNGESGPV 180

Query: 186 SLPEGGQTESTPANS-VTPSLLRIGGESSPHQSSPNYSSHTDMLSASGTSAFSAGRASPS 245
           SLPE GQ E  PA+S VTPSLLRIGGE SP+ S P++SSHTDM+ ASGTSA SAG ASPS
Sbjct: 181 SLPEEGQAEPPPASSLVTPSLLRIGGEESPYLSLPSHSSHTDMVYASGTSAISAGHASPS 240

Query: 246 DSGSSPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGWKERWFSRNS 305
           DSG SP+QSSPRSQDRAGPSDLQ+FSE LKSRLN++STRYKESISKSTRGWKERWFSRNS
Sbjct: 241 DSGRSPNQSSPRSQDRAGPSDLQSFSEALKSRLNAVSTRYKESISKSTRGWKERWFSRNS 300

Query: 306 PMSDIGSEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPDSSESSQARDPVPHE-ADS 365
           PMSDIGSEVRREVNAGIATVSRMMERMETRDD  P+ND+V DSSESSQA DPV    A S
Sbjct: 301 PMSDIGSEVRREVNAGIATVSRMMERMETRDDERPNNDTVIDSSESSQAHDPVTQNGAGS 360

Query: 366 VVSPGENHLSGNRTQAPCAAHSGSD 389
           VV  GENH   NRTQAPCAAHSGSD
Sbjct: 361 VVGSGENHAGDNRTQAPCAAHSGSD 385

[Close]

BLAST of Spo14117.1 vs. UniProtKB/TrEMBL
Match: A0A0S3SH67_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G081700 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 7.700e-122
Identity = 249/401 (62.09%), Postives = 296/401 (73.82%), Query Frame = 1


		  
Query: 1   MKAPGMEDNKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHL 60
           M+   + D+    EA LTSAAAFVEGGIQDACDDACSICLE FCD+DPSTVT CKHEFHL
Sbjct: 6   MEGNNISDDSNKSEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHL 65

Query: 61  QCILEWCQRSSQCPMCWQPINLKDPTGQELLDVVVQERNIRLNPPRNAAIFHHPALGNFE 120
           QCILEWCQRSSQCPMCWQPI+LKDPT QELL+ V +ERN R+NPPRNA IFHHP LG+FE
Sbjct: 66  QCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNFRINPPRNATIFHHPTLGDFE 125

Query: 121 IQHLPVGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDA 180
           +QHLPVG +DA+LEERIIQHLAAAAAMGRARH ARREG R RSS QGRPHFLVFS  P++
Sbjct: 126 LQHLPVGASDADLEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPHFLVFSTHPNS 185

Query: 181 --QAESASLP-EGGQTESTPANSVTPSLLRIGGESSPHQSSPNYSS--------HTDMLS 240
              A ++S P + G  E+TP  +V           SP  ++   SS          + +S
Sbjct: 186 PPMAPTSSSPSQRGDDEATPTIAV--------ANLSPSPATGEQSSQLTLVAPVQAEQVS 245

Query: 241 ASGTSAFSAG---RASPSDSGSSPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKE 300
           ASG+ + + G   + S  ++  SP+QSSP SQDRAGPS+LQ+FSE+LKS+LN++S+RYKE
Sbjct: 246 ASGSGSSALGTEHQGSSYNNRRSPNQSSPSSQDRAGPSELQSFSESLKSKLNAVSSRYKE 305

Query: 301 SISKSTRGWKERWFSRNSPMSDIGSEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPD 360
           SISKSTRGWKERWFSRN+ MSDIGS+VRREVNAGIATVSRMMER+ETRD    + +S P 
Sbjct: 306 SISKSTRGWKERWFSRNNAMSDIGSDVRREVNAGIATVSRMMERLETRDSNRSNINSAPS 365

Query: 361 SSESSQARDPVPHEADSVVSPGENHLSGNRTQAPCAAHSGS 388
           + E    + P     D  ++  E  L  N T+A CAA S S
Sbjct: 366 NLEDDSVQGP----NDQALTGTERLLGDNNTKASCAAGSSS 394

[Close]

BLAST of Spo14117.1 vs. UniProtKB/TrEMBL
Match: M5WB81_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006952mg PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 7.700e-122
Identity = 257/395 (65.06%), Postives = 301/395 (76.20%), Query Frame = 1


		  
Query: 1   MKAPGMEDNKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHL 60
           M+ PGME+  K  EA LTSAAAFVEGGIQ+ACDDACSICLE FCD+DPST+TGCKHEFHL
Sbjct: 1   MEVPGMEETNK-SEAHLTSAAAFVEGGIQEACDDACSICLEAFCDSDPSTLTGCKHEFHL 60

Query: 61  QCILEWCQRSSQCPMCWQPINLKDPTGQELLDVVVQERNIRLNPPRNAAIFHHPALGNFE 120
           QCILEWCQRSSQCPMCWQPI+LKDPT QELL+ V +ER+IR NPPRN  IFHHP LG+FE
Sbjct: 61  QCILEWCQRSSQCPMCWQPISLKDPTSQELLEGVERERSIRSNPPRNTTIFHHPTLGDFE 120

Query: 121 IQHLPVGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDA 180
           +QHLPVGVNDAELEERIIQHLAAAAAMGRARH ARREG R RSS QGRP FLVFS  P+A
Sbjct: 121 LQHLPVGVNDAELEERIIQHLAAAAAMGRARHIARREGQRNRSSTQGRPQFLVFSTHPNA 180

Query: 181 QAESASLPEG-GQTESTPANSVT-PSLLRIGGESSPHQSSPNYSSHTDMLSAS--GTSAF 240
              ++S P+  G+ E  P+ SV  PS     GE S   ++P  SS +  +SAS  GTS  
Sbjct: 181 HPAASSSPDQMGEGEPAPSISVPFPSPPLNTGEESYQVTTPVPSSQSGPVSASAAGTSVP 240

Query: 241 SAGRASPSDSGS-SPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGW 300
           +  +   S S S SPSQSSP +QDRAGPSDLQ+FSE+LK+R N++S RYKESISKSTRGW
Sbjct: 241 APNQHGSSISNSGSPSQSSPSTQDRAGPSDLQSFSESLKTRFNAVSMRYKESISKSTRGW 300

Query: 301 KERWFSRNSPMSDIGSEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPDSSESSQARD 360
           KER FSRN+ M+D+GSEV+REVNA  ATVSRMMER+ETRD+   ++  V +S +SS    
Sbjct: 301 KERLFSRNAAMADLGSEVKREVNASFATVSRMMERLETRDNSRINDPCVSNSLDSS---- 360

Query: 361 PVPHEADSVVSP--GENHLSGNRTQAPCAAHSGSD 389
            VP   +  +S   GEN L+ +   A CAA S S+
Sbjct: 361 -VPQSDNQQISENGGENSLNDHNKPAVCAAGSSSN 389

[Close]

BLAST of Spo14117.1 vs. UniProtKB/TrEMBL
Match: G7IRI3_MEDTR (E3 ubiquitin-protein ligase RHF2A-like protein OS=Medicago truncatula GN=MTR_2g087820 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 2.300e-121
Identity = 248/396 (62.63%), Postives = 295/396 (74.49%), Query Frame = 1


		  
Query: 2   KAPGMEDNKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHLQ 61
           + P +E+N+   EA LTSAAAFVEGGIQDACDD+CSICLEEF D+DPSTVT CKHEFHLQ
Sbjct: 3   EVPVIEENETKSEAHLTSAAAFVEGGIQDACDDSCSICLEEFIDSDPSTVTSCKHEFHLQ 62

Query: 62  CILEWCQRSSQCPMCWQPINLKDPTGQELLDVVVQERNIRLNPPRNAAIFHHPALGNFEI 121
           CILEWCQRSSQCPMCWQ I+LKDPTGQELL+ V +ERNIR NP RNA IFHHP LG+FE+
Sbjct: 63  CILEWCQRSSQCPMCWQSISLKDPTGQELLEAVERERNIRFNPTRNATIFHHPTLGDFEL 122

Query: 122 QHLPVGVNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDA- 181
           QHLPVG NDA+LEERI+QH AAAAAMGRARH ARREG R RSS QGRP ++VFSA P++ 
Sbjct: 123 QHLPVGANDADLEERILQHFAAAAAMGRARHIARREGQRNRSSAQGRPQYMVFSAHPNSP 182

Query: 182 --QAESASLPEGGQTESTPANSVTPSLLRIGGESSPHQSSPNYSSHTDMLSASGTSAFSA 241
                S+S P+ G  E TPA    P  L +     P Q        TD +SASG+ + + 
Sbjct: 183 PMAPASSSPPQRGDGEQTPATGEEPPQLTL---VPPVQ--------TDQVSASGSGSAAL 242

Query: 242 GR----ASPSDSGSSPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRG 301
                  S + S  SP+QSSP SQDRAGPS+LQ+FSE+LKS+LN++STRYKESISKSTRG
Sbjct: 243 ATDNLGLSYNSSRRSPNQSSPSSQDRAGPSELQSFSESLKSKLNAVSTRYKESISKSTRG 302

Query: 302 WKERWFSRNSPMSDIGSEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPDSSESSQAR 361
           WKERWFSR SPMSD+GSEV+REVNAGIATVSRMMER+ETRD+   S+D+ P    S+ A 
Sbjct: 303 WKERWFSRTSPMSDLGSEVKREVNAGIATVSRMMERLETRDNNRSSSDTAP----SNLAD 362

Query: 362 DPVPHEADSVVSPGE--NHLSGNRTQAPCAAHSGSD 389
            P+   +D  ++  E  + L  N ++  C A S S+
Sbjct: 363 GPIQGSSDQHLTDTERDSPLRDNNSKTSCTAGSSSN 383

[Close]

BLAST of Spo14117.1 vs. ExPASy Swiss-Prot
Match: RHF2A_ARATH (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana GN=RHF2A PE=2 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 1.200e-112
Identity = 229/378 (60.58%), Postives = 271/378 (71.69%), Query Frame = 1


		  
Query: 14  EAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHLQCILEWCQRSSQC 73
           E  LTSAAAFVEGGIQDACDDACSICLE FC++DPST+T CKHE+HLQCILEWCQRSSQC
Sbjct: 11  EGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQC 70

Query: 74  PMCWQPINLKDPTGQELLDVVVQERNIRLNPPRNAAIFHHPALGNFEIQHLPVGVNDAEL 133
           PMCWQ I+LKDPT QELL+ V QERN R NP RNA IF HP LG+FE+QHLPVGV++AE+
Sbjct: 71  PMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPVGVDNAEI 130

Query: 134 EERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDAQAESASLPEGGQT 193
           EERIIQHLAAAAAMGRARH  RREGHR RSS+QG   F+VFS+QP+A +     P     
Sbjct: 131 EERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNASSPPPHPPMPSSP 190

Query: 194 ESTPANSVTPSLLRIGGESSPHQSS--PNYSSHTDMLSASGTSAFSAGRASPSDSGSSP- 253
                +    +L         HQS+  P  SSH   +S S            SDS S P 
Sbjct: 191 SQRDESDTVSNLPHNALGEGSHQSNTQPPTSSHPRQVSPSA-----------SDSNSRPL 250

Query: 254 SQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGWKERWFSRNSPMSDIG 313
           +QSSP  QDRAGPS+LQ+FSE+LKSRLN++STRYKESISK+TR WK+R FSRN+ M+D+G
Sbjct: 251 NQSSPSEQDRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLFSRNTSMADLG 310

Query: 314 SEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPDSSESSQARDPVPHEADSVVSPGEN 373
           SEV+REV+AGIATVSRMMER+ETR++  PS  SV D SE+     P  +   +  + G+ 
Sbjct: 311 SEVKREVSAGIATVSRMMERLETRENSRPSTASVSDVSEN---HTPETNNEHNRAAAGDE 370

Query: 374 HLSGNR-TQAPCAAHSGS 388
           H    R  +  CA  SGS
Sbjct: 371 HSVNERGVKETCATGSGS 374

[Close]

BLAST of Spo14117.1 vs. ExPASy Swiss-Prot
Match: RHF1A_ARATH (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana GN=RHF1A PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 7.900e-35
Identity = 115/327 (35.17%), Postives = 167/327 (51.07%), Query Frame = 1


		  
Query: 9   NKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHLQCILEWCQ 68
           N  +  +  +S+A  V     +  DDACSICLE F   DPSTVT CKHE+HLQCI+EW Q
Sbjct: 19  NPAIGSSSSSSSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQ 78

Query: 69  RSSQCPMCWQPINLKDPTGQELLDVVVQERNIRL-NPPRNAAIFHHPALGNFEIQHLPVG 128
           RS +CP+CWQ   L+DP  QELL  V +ER ++  N   ++ I  H +  +F  +     
Sbjct: 79  RSKECPICWQLFVLRDPASQELLAAVEKERLLKTRNISSSSPISIHHSHDDFHSEEEESQ 138

Query: 129 VNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDAQAESASL 188
            +    +E+ ++HL  AA     R   RR                      D Q  S+ +
Sbjct: 139 FSS--FDEQFLRHLTEAA---HRRCLLRRR---------------------DGQISSSLV 198

Query: 189 PEGGQTESTPANSVTPSLLRIGGESSPHQSSPNYSSHTDMLSASGTSAFSAGRASPSDSG 248
                T   P + V  +L R+   S     + N       ++ S  S  S+  A  S++G
Sbjct: 199 SSSDPTTIHPTDLV--NLYRLSAISHVEHQNSNPCPSPGSMTPSPVSGHSSIPAD-SNNG 258

Query: 249 S--SPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGWKERWFSRNSP 308
           S  SP  S  RS       +  +  E +KS+L + S +YKESISKS +G KE+  +RN+ 
Sbjct: 259 SRISPGPSPSRSSQSPKSPEASSLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNS 316

Query: 309 MSDIGSEVRREVNAGIATVSRMMERME 333
           + ++   V+RE+NAGIA V+RM+ERM+
Sbjct: 319 VKELSKGVQREMNAGIAGVARMIERMD 316

[Close]

BLAST of Spo14117.1 vs. ExPASy Swiss-Prot
Match: RHB1A_ARATH (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana GN=RHB1A PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 9.700e-9
Identity = 24/55 (43.64%), Postives = 35/55 (63.64%), Query Frame = 1


		  
Query: 30  DACDDACSICLEEFCDNDPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPINLKD 85
           D  +D C IC E++   +P   T C+HEFHL C+LEW +RS +CP+C + +   D
Sbjct: 133 DEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187

[Close]

BLAST of Spo14117.1 vs. ExPASy Swiss-Prot
Match: RN181_DROME (E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster GN=CG7694 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 7.000e-7
Identity = 28/77 (36.36%), Postives = 39/77 (50.65%), Query Frame = 1


		  
Query: 25  EGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPINLKD 84
           EGG     D  CS+C E   +     +  CKHEFH +CIL W ++++ CP+C   +   D
Sbjct: 64  EGG-----DLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYELETDD 123

Query: 85  PTGQELLDVVVQERNIR 102
           P  +EL      E N R
Sbjct: 124 PVYEELRRFRQDEANRR 135

[Close]

BLAST of Spo14117.1 vs. ExPASy Swiss-Prot
Match: RN122_MOUSE (RING finger protein 122 OS=Mus musculus GN=Rnf122 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.500e-6
Identity = 25/64 (39.06%), Postives = 36/64 (56.25%), Query Frame = 1


		  
Query: 35  ACSICLEEFCDNDPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPINLKDPTGQE---LL 94
            C++CLE+F   D   V  C+H FH +C+++W +    CPMC +PI     T Q    LL
Sbjct: 92  TCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPIAGPTETSQSIGILL 151

Query: 95  DVVV 96
           D +V
Sbjct: 152 DELV 155

[Close]

BLAST of Spo14117.1 vs. TAIR (Arabidopsis)
Match: AT5G22000.2 (RING-H2 group F2A)

HSP 1 Score: 407.9 bits (1047), Expect = 6.900e-114
Identity = 229/378 (60.58%), Postives = 271/378 (71.69%), Query Frame = 1


		  
Query: 14  EAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHLQCILEWCQRSSQC 73
           E  LTSAAAFVEGGIQDACDDACSICLE FC++DPST+T CKHE+HLQCILEWCQRSSQC
Sbjct: 11  EGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQC 70

Query: 74  PMCWQPINLKDPTGQELLDVVVQERNIRLNPPRNAAIFHHPALGNFEIQHLPVGVNDAEL 133
           PMCWQ I+LKDPT QELL+ V QERN R NP RNA IF HP LG+FE+QHLPVGV++AE+
Sbjct: 71  PMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPVGVDNAEI 130

Query: 134 EERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDAQAESASLPEGGQT 193
           EERIIQHLAAAAAMGRARH  RREGHR RSS+QG   F+VFS+QP+A +     P     
Sbjct: 131 EERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNASSPPPHPPMPSSP 190

Query: 194 ESTPANSVTPSLLRIGGESSPHQSS--PNYSSHTDMLSASGTSAFSAGRASPSDSGSSP- 253
                +    +L         HQS+  P  SSH   +S S            SDS S P 
Sbjct: 191 SQRDESDTVSNLPHNALGEGSHQSNTQPPTSSHPRQVSPSA-----------SDSNSRPL 250

Query: 254 SQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGWKERWFSRNSPMSDIG 313
           +QSSP  QDRAGPS+LQ+FSE+LKSRLN++STRYKESISK+TR WK+R FSRN+ M+D+G
Sbjct: 251 NQSSPSEQDRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLFSRNTSMADLG 310

Query: 314 SEVRREVNAGIATVSRMMERMETRDDGIPSNDSVPDSSESSQARDPVPHEADSVVSPGEN 373
           SEV+REV+AGIATVSRMMER+ETR++  PS  SV D SE+     P  +   +  + G+ 
Sbjct: 311 SEVKREVSAGIATVSRMMERLETRENSRPSTASVSDVSEN---HTPETNNEHNRAAAGDE 370

Query: 374 HLSGNR-TQAPCAAHSGS 388
           H    R  +  CA  SGS
Sbjct: 371 HSVNERGVKETCATGSGS 374

[Close]

BLAST of Spo14117.1 vs. TAIR (Arabidopsis)
Match: AT4G14220.1 (RING-H2 group F1A)

HSP 1 Score: 149.4 bits (376), Expect = 4.400e-36
Identity = 115/327 (35.17%), Postives = 167/327 (51.07%), Query Frame = 1


		  
Query: 9   NKKLEEAKLTSAAAFVEGGIQDACDDACSICLEEFCDNDPSTVTGCKHEFHLQCILEWCQ 68
           N  +  +  +S+A  V     +  DDACSICLE F   DPSTVT CKHE+HLQCI+EW Q
Sbjct: 19  NPAIGSSSSSSSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQ 78

Query: 69  RSSQCPMCWQPINLKDPTGQELLDVVVQERNIRL-NPPRNAAIFHHPALGNFEIQHLPVG 128
           RS +CP+CWQ   L+DP  QELL  V +ER ++  N   ++ I  H +  +F  +     
Sbjct: 79  RSKECPICWQLFVLRDPASQELLAAVEKERLLKTRNISSSSPISIHHSHDDFHSEEEESQ 138

Query: 129 VNDAELEERIIQHLAAAAAMGRARHFARREGHRGRSSNQGRPHFLVFSAQPDAQAESASL 188
            +    +E+ ++HL  AA     R   RR                      D Q  S+ +
Sbjct: 139 FSS--FDEQFLRHLTEAA---HRRCLLRRR---------------------DGQISSSLV 198

Query: 189 PEGGQTESTPANSVTPSLLRIGGESSPHQSSPNYSSHTDMLSASGTSAFSAGRASPSDSG 248
                T   P + V  +L R+   S     + N       ++ S  S  S+  A  S++G
Sbjct: 199 SSSDPTTIHPTDLV--NLYRLSAISHVEHQNSNPCPSPGSMTPSPVSGHSSIPAD-SNNG 258

Query: 249 S--SPSQSSPRSQDRAGPSDLQTFSETLKSRLNSMSTRYKESISKSTRGWKERWFSRNSP 308
           S  SP  S  RS       +  +  E +KS+L + S +YKESISKS +G KE+  +RN+ 
Sbjct: 259 SRISPGPSPSRSSQSPKSPEASSLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNS 316

Query: 309 MSDIGSEVRREVNAGIATVSRMMERME 333
           + ++   V+RE+NAGIA V+RM+ERM+
Sbjct: 319 VKELSKGVQREMNAGIAGVARMIERMD 316

[Close]

BLAST of Spo14117.1 vs. TAIR (Arabidopsis)
Match: AT4G00335.1 (RING-H2 finger B1A)

HSP 1 Score: 62.8 bits (151), Expect = 5.500e-10
Identity = 24/55 (43.64%), Postives = 35/55 (63.64%), Query Frame = 1


		  
Query: 30  DACDDACSICLEEFCDNDPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPINLKD 85
           D  +D C IC E++   +P   T C+HEFHL C+LEW +RS +CP+C + +   D
Sbjct: 133 DEEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187

[Close]

BLAST of Spo14117.1 vs. TAIR (Arabidopsis)
Match: AT4G23450.2 (RING/U-box superfamily protein)

HSP 1 Score: 60.1 bits (144), Expect = 3.500e-9
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 1


		  
Query: 34  DACSICLEEFCDNDPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
           D C ICLEE+  ++P  +T C H+FHL CIL W +RS  CP+C
Sbjct: 157 DECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVC 199

[Close]

BLAST of Spo14117.1 vs. TAIR (Arabidopsis)
Match: AT5G41350.1 (RING/U-box superfamily protein)

HSP 1 Score: 59.7 bits (143), Expect = 4.600e-9
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 1


		  
Query: 33  DDACSICLEEFCDNDPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
           ++ C ICLEE+   +P  V  C H FHL CILEW +RS  CP+C
Sbjct: 158 EEDCPICLEEYDIENPKLVAKCDHHFHLACILEWMERSETCPVC 201

The following BLAST results are available for this feature:

BLAST of Spo14117.1 vs. NCBI nr
BLAST of Spo14117.1 vs. UniProtKB/TrEMBL
BLAST of Spo14117.1 vs. ExPASy Swiss-Prot
BLAST of Spo14117.1 vs. TAIR (Arabidopsis)

BLAST of Spo14117.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902207277\|gb\|KNA15665.1\|	1.5e-214	99.4	hypothetical protein SOVF_0961...	[more]
gi\|731348417\|ref\|XP_010685476.1\|	7.8e-176	84.7	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|870853097\|gb\|KMT04978.1\|	5.1e-175	84.9	hypothetical protein BVRB_7g17...	[more]
gi\|658049290\|ref\|XP_008360334.1\|	8.2e-125	64.5	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|694407758\|ref\|XP_009378604.1\|	3.5e-123	63.8	PREDICTED: E3 ubiquitin-protei...	[more]

BLAST of Spo14117.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R859_SPIOL	1.0e-214	99.4	Uncharacterized protein OS=Spi...	[more]
A0A0J8BYD6_BETVU	3.5e-175	84.9	Uncharacterized protein OS=Bet...	[more]
A0A0S3SH67_PHAAN	7.7e-122	62.0	Uncharacterized protein OS=Vig...	[more]
M5WB81_PRUPE	7.7e-122	65.0	Uncharacterized protein OS=Pru...	[more]
G7IRI3_MEDTR	2.3e-121	62.6	E3 ubiquitin-protein ligase RH...	[more]

BLAST of Spo14117.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RHF2A_ARATH	1.2e-112	60.5	E3 ubiquitin-protein ligase RH...	[more]
RHF1A_ARATH	7.9e-35	35.1	E3 ubiquitin-protein ligase RH...	[more]
RHB1A_ARATH	9.7e-9	43.6	Probable E3 ubiquitin-protein ...	[more]
RN181_DROME	7.0e-7	36.3	E3 ubiquitin-protein ligase RN...	[more]
RN122_MOUSE	4.5e-6	39.0	RING finger protein 122 OS=Mus...	[more]

BLAST of Spo14117.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G22000.2	6.9e-114	60.5	RING-H2 group F2A	[more]
AT4G14220.1	4.4e-36	35.1	RING-H2 group F1A	[more]
AT4G00335.1	5.5e-10	43.6	RING-H2 finger B1A	[more]
AT4G23450.2	3.5e-9	53.4	RING/U-box superfamily protein	[more]
AT5G41350.1	4.6e-9	52.2	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 35..76 score: 1.
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 36..76 score: 7.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 36..76 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 33..85 score: 1.2
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 12..174 score: 4.7E
None	No IPR available	PANTHER	PTHR22763:SF47	SUBFAMILY NOT NAMED	coord: 12..174 score: 4.7E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 29..84 score: 2.83

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0044265	cellular macromolecule catabolic process
biological_process	GO:0044267	cellular protein metabolic process
biological_process	GO:0048229	gametophyte development
biological_process	GO:0032787	monocarboxylic acid metabolic process
biological_process	GO:0007165	signal transduction
cellular_component	GO:0044464	cell part
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding