Spo14202.1 (mRNA) | SpinachBase

Overview


Name	Spo14202.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Peptidyl-prolyl cis-trans isomerase
Location	SpoScf_02054 : 15725 .. 26766 (-)
Sequence length	1350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGCTCATAAGTCATAAATAACTCATACGAAGAAACATTCTAACTTTAGAATGTGGGCCATAACAATTAACAAGTAATTAATCTCTTCCTCGTTCAACCAAAACCCCCCGTTTTCAATAAGGAAATCCTGGTCCTGGATAAATCCTAACTGCAACTTCAAGTCTCCAACTCCAACTCCAACTCCAACTCCAACTGAATCATGGAACTCACCCTCTTCTCTCACTACCATTCCCAATTTCTCTACAAATCCACTTTTAGTAGAAACTTGATACCCAATACTAGAAATTTGACGTTATTAAATTGCAGTTGCTCATCTTCATCATCATCAAAAGATCCTGCAAAACCAACAACATTATCTTTGACTAATGATGGAAGAAGGGCATTCATGAGTTGTTTACTCATAGCAGGTTTGTTTTTAGTTTTTCTGAATTCCCCCTTTTTGGAATTTCGTTGATTTTTCATTCATTCATTTCTGTGTCAATTTCGGTTGGCGTTACCTTTGATATAAATAAATGCTCGTTGATGCAATTTATAACCTTTTAATTTTGCATTTATTTGTTGATGTTTGACAAAATCTGGAAAGAGAAACAACAGGAAGAGAGAATTTTATGCTTTTCTTAATTGATGAAANACAAAATCTGGAAAGAGAAACAACAGGAAGAGAGAATTTTATGCTTTTCTTAATTGATGAAAACTGAATAATGATTATTACAATGGTGCTTGCCTTTTATAGCTTAAACTAATTCTAGAAGCTACTAAAACTGTTACAACTAAACTCCTAGAAATAAGGGAGCTACAATAACAGAATGTGCCAGCATGGCAGCTCATGTGCATTACTTGTTTTGCACGAAATGATCTTATGCTCAAGGCTGAGTAATACAATGCTCATAAGCTTAACAGTCCCCCTCAAGATGGAACATCACATGTTCCAATCTTGGACAGTAGTTGTTGAAACTGTGCAGAAGAAAGTGGTTTAGTAAACACATCTGCTAGCTGATTTTCAGTAGGCAAGTATGCAAGATGTAGTAGCCCTTCCAACACTTTGTCACGTGTAAAATGACAATCAATCTCAATATGTTTTGTTCTTTCATGAAAAACTGGGTTTCTAGCAATATNGTAAAATGACAATCAATCTCAATATGTTTTGTTCTTTCATGAAAAACTGGGTTTCTAGCAATATGCAAGGCTGACTGATTATCACAGTGGAGACTAATAGGTTTGAGATTGATGACTCCCATATCTTCTAATAAATTAACCAACCAAGTTACTTCAGCTGATGCTGCAGCATTGCCCTGTATTCTGCTTCTGCAGATGACTTTGAGACTGTATTTTGTTTCTTAGACTTCCATGAGACTGGTGATCCTCCTAAGAGTAACACATAACCAGTGATGGACCTTCTAGAATCTGGACATGAAGCCCAATCTGAGTCTGAAAAAGCTTGTAAGCTGATACTGTCTGAAGCTTTCAACAATATTCCTTGCCCTGCAGTGTGAGCTAGATACCTTAATGTATGATGTAAGGCTGTAATGTGAGGTACTCTAGGGTGTTGTAGAAACTGGCTTAGTAACTGAACTGCAAAGGACAAATCAGGTCTGGTGTGGGTTAGAAAGTTAAGTTTCCCAACCAATGATCTGTATTTTTTCTGTGTCAGAATACAACTCCCCATCAGATAATGTCAACTTCACATTCACTGGAAGTGGTGTTATGGCCTTCTTTGTGATGTCAAAACCACAATCACTGAGCAACTCTTTGGTAAACTTCTTTTGACTAAGGATGATCCCTTCAGTTGAATAGCCAACTTCAATCCCTAGAAAGTAGTTAAGTTTCCCCAAATCCTTGATGCTAAATTCCTGATGCAAATAAGCTTTCAATGCAGCAAGCTTGTTGGGATCTGTACCAGTAAGGATGATATCATCAACGTAAACTGCTGCAATGCTGATATGACCATGTTCTCTATGAATAAACAGACTGTAATCATGCTTGGATTGAATAAAACCCTGTGTTTCAAGAGCAGTCAGAAGTTTCTCATGCCATTGTCTTGAAGCTTGTTTTAAGCCATAAATGGATTTGAGTAGCTTGCACACTTTATTATCAGGATTGTCAACACCTTCAGGAACTTGCATGTACACCTCTTCTTTCAAATCTCCATGGAGAAATGCATTATTAACATCTAGCTGATAGAGAGGCCAATTTCTGCTTGCTGCAACAGCAATCAAGCATCTCACAGTTGTCATTTTAACCACTGGACTGAAGGTCTCTTCATAATCTATCCCATATTTCTGGTTGAACCCCTTTGCAACAAGTCTTGCTTTACATCTTTCCAGGGCCCCTGTTGACTTCAACTTGACTTTGAATACCCACTTGCACCCTAATGCCTTTTTCCCTTTAGGTAACTTTACCAGTTCCCATGTCAAGTTATGATCAAGTGCATTGAGTTCCTTTTGCATAGCTTCCACCCACAGTGGATGCTGTACAGCTTCATCATAGGATAAAGGCTCTGTGATATCACAAAGTTGTGACAAAAGAGCCTGAAATTCTGCAGGAAAAGTGTCAAAAGAAACCAGATTGCACCAATGTTGAGTGTACTGTGGAGAAATGATGGATTCTGGATTTAGTACAGATGAATAACATTGGTATGAATCTAGGTATGATGGTTTTCTGTGTGTTCTTGTGGACTGTCTAGGTGGTGGAATTGTAGAAGCATTCTCAGTAGTATCTTGTCTGTGAGAATCAGGTGGAGAAGGAACATCAGTGGGACTAGATGAGGGATGAAAATCATCATTGTTTGAACTAGATGGAGAAGAAGGTTGAATGTATGTAGGTGTTGAGTGTGGTGAAGGAAATATGGTGTCTGGTGAGTTGCTATGTTCCTGGATAGTAGAAGATGAGTTAGGTGAAGGTGAGTTAGGTGAGGGAAATGTGGTTTCTGGGGAAGAAAAATCTGGTGTATCAAAGATTACAGGTGATGTGACAGCAGGTAGATAAATGGCATGGATATAGGGATGATCAGAAGAACTGTGTTTGTGATAAATGTGGAAGGGAAAATGTTTTTCATGAAAGTGAACATCCCTTGACACAAAAAATTTGTTTGTATCAAGTTCTAGAACCTTGTATCCTTTCTGAGAAGTGGAGTATCCTAAGAAAACACATGGTGTAGCTCTGTGATTCAGTTTAGTTCTCCCTACTTTGGTTGTAGATACATAATACAGACATCCAAATGTTCTTAGGTGAGACAAATCAATGGTTTTCTTGTATAATCTGAAATGTGGGGTATCAAGATTGATTGACTGCAATGGCATCCTATTGATCAGATATGCAGCACATAACACACATTCACCCCAAAACCTAGCTGGTACTTTAGATTGAATGTACAAAGCTCTTGCTGTCTCTAAAAGGTGCTTGTGTTTCCTTTCTACCACCCCATTTTTGTTGTGGTGTATCACTGCAGCTAGTTTGATTCATAATTCCAAACTTTAGACATAGTTTCTTCATTTCCCCTTCACACAACTCTTTAGCATTATCAGACCTAATGCATTTAACCATGACTCCAAACTGTGTCTGAACCATATTAAGAAAATCAGTCATGACAATAACAGAATCACTCTTATTTTTCAACAAATGTATCCAAGTAAATCTGCTGTAATCATCTACAATTGTCAAGAATTGATTACATCCAGAAGGTGTTTTAACAGAGTGAGGACCCCATACATCAAGGTGAATCAACTCAAAAGGAGCAACAGTCTTAATACTACTGTGAGGGAAGCTAACTCTAGTTTGTTTAGCTGCAGGACATACTTGACAAATTGTATCCTGTATACAAGTAGTCACCTCACACTTAGTATTTATTAACTTCAATTGACTAAAAGGCAGATGTCCTAATCTTAAATGCCAAAGTTTAGCATTGTCTACAGAACTAGAACAAACTGCATTACAAACAATACTTGTTTCTTCTGCTGCAATTCTCCCACATTGTAAAGACCTGATTTCACTTCACCAAGAGGAATCAAGTTCCCTTTCCGACAACAAACAAAACACTGATCATGAGTAAATCGAATTTCACACTTCAGATCTTGACACAATTTGTGGACAGATATAAGGTTGTACTTGAAGTTTGGAACATATAAAACATTCTGTAGAGTTATGTCAGGATTTAGAACCACAGAACCAACATGAGTCACAGGGATTCTACTTCCATCTGGTATGGTTATAAAAGTGTTTTGTATGTCAACTGGTTTGCAAGTAGTGAATTGGGACAAATCATGACAGAAATGGTCAGATGCACCACTATCTAACAACCACTTAGAATTAGTTTGTGATAGTAAGCATATACCTGCCATCAAAGCAAGATTAGTCTGATTTCCAGAGGTTTGTTGTTGCTGTTTAGACATCATATCCAAGAGTTGCTGGTACTGTTCAGTTGTTATTGTGGGAGCAGTCACAGTCTATGTTTCAACACAAACATCAGAATTAGTGCCAGATGAGAGTGCAACTACTTTAGAATCTCTGGAACCTTTGAAACCTGGTGGATAACCATGAATCTTGAAACATCTATCCACACTGTGTCCTTGCACTTGGCAGTGTGTGCAAAAATAGCTAGAACCTGTTCTTCCATATCTGTTTGTGTTTCCAGTTTGAAAACCACCACCAGTGTGTTGTGTTTTGAATGTTTTGTTGTTGTTATTCCAATGATCTCCTCCAAAACGTCTCTTCTCAGCTGCAAAAGCCAGTGTCTCTACTTGTTTGTTAGACTGTGAGATTTCTTTGTGTCTTTCTTCTTGAGCAAACAATCTGTATGCCTCAGATACTTTAGGCAAAGTAGGCACCATCAACACATTTCCTCTGATAGTAGCAAACTGATCATTAAGCTTCATCATAAATTGCATCACCATCCTTTCCTGTTGCCTCAGAAAAAACTTCTTAGTGACATTACAAGTGCAGTTGTTACATGTGCAATATGGCAGAGGATTAGCTTCCTCAATTGCATCCCAAACAGATTTAATTTCAGTGAAAAACTCTGAAATATTCTTATCTCCTTGAGTGATCTCAGCTAGCTTTTGTTCAAGAGAATAAATCTGCGCCAAAGATGCAAAACCAAACCTGTCTTCTAAATCAGTCCAAACATCTCTAGCTGATTTCAGAAACATCACACTCTTAGCTATCCTATCATCCAGATTACCTAGGATTAAAGAACACACCAAGTCATTACACCTTTCCCAAGCCTTACTCTCCATTGAACCAGGATCAGGTTTGATGTAGCTTCCATCAATGAAACCAATCTTATTCTTTGCTGACAATGCCAGCAGCATTGACCTCTTCCAGCTAGCAAATCCTTCACCATTAAACTTGAATGTAACCAACTGAGTTGAATTTTCATCTGATGGATGAATATAGTAGATACTTGCAGGATCTTGATTAGGAGGTAGTACAGAATTTCGTCTTGAGGTTTCTGCACTTGAATCAAAATCTTCAACAGCCATTTTCAGAAGTAACTCTTGGATTAAGAATCAGAAGATCAGGAATATAGAGAGAAATTTGGAGTTTTAACTACGAAGTTGCTACTAACACCAGAAAATCAGTGCAACAAATTGTGGAATCAGGAAGAACAGAAAGCAATTTTTGAAGAAATCAGAAAGAATTTTGCGGAATTTCAGAAAAAATGAGCCAAGAATCTTTGATTCTACTCTGATACCATGACAAAATCTGGAAAGAGAAACAACAGGAAGAGAGAATTTTATGCTTTTCTTAATTGATGAAAACTGAATAATGATTATTACAATGGTGCTTGCCTTTTATAGCTTAAACTAATTCTAGAAGCTACCAAAACTGTTACAACTAAACTCCTAGAAATAAGGGAGCTACAATAACAGAATGTGCCATCATGGCAGCTCATGTGCATTACTTGTTTTGCACGAAATGATCTTATGCTCAAGGCTGAGTAATACAATGCTCATAAGCTTAACAATGTTGTTGTAAATTTAGCTGAGAATTTGTACAATCTGTTGGTATTTGTTCATTCAAGGAATTGACAGTTGTTAATACCCAATGACATATGAGTAATCGATAAAGGGTTTTTGGATTTGAGTGGTTAATCCTATTAGTAACCTTGTGCTCTCTTTTTTCTGAAATGGCTTGTTTGTTAGACGGTAGTAAAAGGCGGTAATGGTCTTGAATGTATATGTTCGATTATTCGTGGTAAACATGCAGTTGAAAAACGCTAAGTTTGAGTGTAAGAAGTGAAAATTTGTATGGGAAGTGAGTACTAAGAAATTCCTAGTTAATCTCAGTGATTATATGTGATAGAGTATAAAACTAATCTTGGGTGAATCCCCAAGATTAGTTTTATACACTATCATGTCAAAGGACCAACTCAACCAAAAGCTTAAGCTTATGGTTGAAGCCCCAAGATTAGTTTTATACTCTATCACGCCCCCTCACATGAAAGCCCTTTGGGCTTGAAGTGTGAATGCAGCATAGGCCTCCTCATACCTAGCGCGAAATATTTCACTTTGAAAGGAGGGGTGGATGAGATTTGAACCCGTGACCTTTGCGTCACGTTGGCTTTGATACGATGTCAAAGGACCAACTCAACCAAAAGCTTAAGCTTGTGGTTGAAGCCCCAAGATTAGTTTTATACTCTATCAATATGGATGGCATAAGATGAACAAGAGGACATTCTTACAGAGTTACAGTGTTGGGTGAGTAATACTTGGTTGTATCTTTGTAATACATTGTGTATCTTTCATGTACATTGTGGGTGTGTTTCCTGCATCCTTGGTAAGTAGTTGGTATTTGATAGTCCTTGGTCCTTGTGTAGTCTGTTCTGAATTTTCTGTGATACAGCTGGTGGGTTGTGTATCACTGATCTGGCTGGGGCTGTCAGCACAAGTAGAAGAGCTGTAAGGTTTCTCAAACTATACTTTTACTAATGCATCTTTCTGCTACTATGGATTTAAGGACCTTTTTATTTCACAGCTTAGAGGAGCAAAAATACCTGAGACCGAATTTACAACCCTTCCCAATGGTCTAAAGTTAGTCAATCTTCCTAATATCTCTTTATCATTATTATTATTATTGTTATTATTATGATTTTTAAAGACCCTTTCTGTAGGTACTATGACTTGAAGGTTGGAGGCGGGGCAGAAGCTGTAAAGGGATCTCGTGTAGCAGTACGGTTGTGACTCATTTAATTTATTGTCACTGTTTAAAAGTAGACTTGGTTATGCTTGGAAAAGGAAGTTATATTGCATGTCATTAGCAATTTACAATTTTATACAACATAAAATGTCTTAAATGTTCAACTCTGCCTCAATGTATTCTGAATCATCATGTTCTAGTGTTTGCTTAGTATATTAATGGGGAAATTGTGTGTAATTGCTTAATTGATGCAAATTATCATCTATAGATTTGAAGGCACTATGAAGCTGTTTACACTGGTTTTATCCCCCGATTTTGACAACAAGTATTTTCTATTATAAGCTTTGGTGATGCATGTTGATGATCTATCTCACTCAATGTGTTACCTGTGTGTGCTACCATTATAGGTGTTCTACTTGCAATTTATCTAAACCTTTGTCAGGTTGTCCTCTGTCGTTTATATAAAATTTGTACGTAGGTGCATTATGTTGCTAAATGGAAGGGCATCACTTTTATGACTAGTAGGCAAGGGATGGGAGTTGGCGGAGGAACGGTAAGATCTAACCTTGCTGAGTTGCTGTTACATGTAATTCTCACTAGAAGAATAAATGAAAAGAGCTCAATGGATGGCCAACATGCTCGCCCATTTTACACGCATTAACTTTTGGGTATTTGATTTTTCATATCTTTAGGATCTGGTACTTATAGTTTTGTACATGAATTTGCATTGGTCATGTACTTCTTGCATCTGGGGCATTGAAATTTCATGTTCCTCCTAAAGTCTTGCTTGTGCCGGAAAGTTTAATTTCTTTTTTTTATGCATATGCCTGAATGCTTTTTAATTTTGTTTTATTACATCTGCAGCCTTATGGATTTGACGTTGGCCAGTCAGAACGCGGCACAGTTCTTAAGGGGCTAGATCTTGGTGTTCAAGGAATGAAAGTGGGTGGCCAGGTGAGACCATTAGTTACTAATTTAACATTGATGCATGTCAACAAAAGAGAATTCAAAATCTTCACATCTGATACTTCTGCTGAAATTCGGACAGAAGAAGTGGAGCTTAATATGCAGATTTCTTTGCATAAAATTATAAATAAAAGTTTTATTAACATATAACTCTTCCTTGCTAATTTTAGAGCTCGTTGCTTAAAAATGCAGAGAATATTGGTAGTTCCTCCAGAACTAGCATATGGGAAGAAAGGAATCCAAGAAATCCCTCCAAATGCAACAATTGAGGTACGATACACTCTGGCATCTAATTTTCTCACTTCTAGTAATGGGTAAGAAGCAACACGACACTGATTTGACTTTGCTGTATATGAATAAGCTTTTCTTTTATGTGGTATAAAAAAATGGTTTTTTGTGTTAAATTTTAATGCGGGCTATGATTGATTAACTTCTGAATTATGTATCTAACATGAAGTTTTGATGGCTTCAGCTTAGATGTCATTCATCACCTGAGGCGCTGTCATTCTGAGCGTCTGATCCAGTTCTTCCAACTGTTAAAATGTTTACTGGATGAGTAATGTTTAGTCCAAAATACTATTCTGGTAGAAGTAGATGCCTCCGATATTTGATGCCCCCATATCCTGAGCATTTGATGATTATGAAACATCTTTATTTCAAGGCAGAATCCTACACAAAAAATACCGTCCTAATTAACACACAGAGTCTTGAATTTCATTTGCGTATTTTAAGATATACCGTCCTAATTATATATCTTATAATGTTGGTCGCCAATGAGTGAGAAAAGCCTCTTTTAAGTTAGTGTCTGTTTGGGTTTTTGAGATGCAGATCATATAGCTGTTTAAAACTAATTTTTTTGTAGGGTAAATTATCATTGCCATTTCCAAACTGACGGTGCACAATTAGTTCATGCTTAAGATCTGTACCATTTTTAAGCTTCTCCACTTGTGATGAAGCCATAACTTGTGTATATGTCAATAAAAAAAAAGGTTACCTACGGCTTACAAGGCTGGAGCTCAAGTAGCCATAACTTGAGTTGCAAATCTTGGTGGCAATTTGGGAAAGAGGATAACCTGGATAGATATAGCTATAATACTCACAATTTACAGTTAAGTGCTATGTTACTTGGACTCGGGTACTAGTGTCGGACACGGGTACATGTCCAAGTGTTCCACTCGGCTAAATTGTGAAAATTTTCCAGGTTTTAAGTAAAAAATGAAGTGTCGGAGTGTCCGTACCCATGTCGGAGTGTCGAGGGTCCGACACGGATACTTGAGGTAAAATGAAGAGTCGGAGTAACATAGGTTAAGTGTTAGATGTTTAACTTTTGATGTTATTGCTTGATGTTCTGAACCATGAGGTGACGTGAATAAACGTTATGCTTCATTCAATCGTGTCCACGAGTTTCTGATGATATTACTAGACACAAAGAACACCATTGGCTCTCACAAATCTTCATGAAATTGTCTGTAGAAAAATAGGGCACATATTGGAACAAGTCAGCAGTAAACCTCCACTGCTTCATATCCGCATAATAGTGTCTGGCACGGGCATACCAGTCATAACTCAAGTATGTTATGGATCTTCCAACTAGACATTAACATTCCCGTGATCCAATTTGCTTTCTTTGGTCATTCTAAAATCTTATACTTCCTGATTTTCTATAATTTGCCTATACAAGTGTAACAGAATGTGAAATTGCTAGTTTTAAGTCCTCTCTGCCCCCTCCGGATTATTTAGAAAACAAAAAAGAACAATGATGCTTAAGAGAGCCATGCTACACTGATAAAAAGCTGAAAAAGATCTGCTCAACAATTTGGGACCTAGAATAACAAGTCCACCCGTAGGAATACAGAAGACCACTACCTATCCACCCCATTTTTGCATGAATGTCAGATTCCATAACAAATTTGACTATCTGCAAACTGCAGATTGACTACCCCAAATCACTTTGGGTAGATTTCTAAGGGGATTTTTATATGCAGCTTTATCCCGAGGAACTGGATAGACTCTGATTGAGTTATACCGAGTCCTTGACATAACCTCTGACCTTGAGCCTTATTGTTGGTAATGATTTTAACTAGATCAGGGAGAAGTCCGGTATGTTATTGTCCATGATTGTGTTATATTGATTGGTAAAATAAACTGAGGGTTGAACAAAATGATTTGTCGATAACTCTACTTACATATTTATTCAACCCACCAGTAAATCTTCAATTTCTTGATTTTTAGTAGAAATTTATTTTGTCCATAACGTTCTTTTCTACTTGTCTGCAGTTCGACGTGGAACTATTGTCAATCAAGCAAAGTCCTTTCGGGTAAACCATTGTATTGTCGAACAACCTTTGATTCTTAACAGTAAAAGCTCCCTAATTGGTTTTACTGTTAATTTGCTACTGCAGGTCTCCAGTAAAGCTCGTGGAAGGATGAAATGATCCTATTCGTGTATGGACAACTATTGTTCAATTTCTTTGACTGCAAATATTGTTTCTTGCGGATGAAGATTCTTCTCAACTATCCAACATTTTTTGTCAGTTTATCCTTGTATAATCTTCAAATATATCAAGCGATGTCAGAATAATATCAAGCCAACATTTGTAATGTCTATCCGCAAAATGTTATTCTCCAAGTTTGCAAGTGTTACCCAAGTACTTGTAGATTAGATAGAGTAATAGATTTGCAAGAAATAAGCATTGATCATTTTCATGTTGTTTTTTTGTTCTACTTCGAGGAGTTCCCACTGCCTTGCAAGAAATAAGACGGGAGTTTGCTTGGGTACCTCGATGGCCAACATTCCTCCCATTTGAGGTTTTTTCCATTCCCAAGGCTCGAACCCGAGACCTTTTGGTTAAGCATTGATCATTTCGTCTAAATGAAACTCCATTGCACTCCATAACATAAGTTCATATGTCTAACACGCATTAAATTATTTATTCTCCAC

mRNA sequence

GGAGCTCATAAGTCATAAATAACTCATACGAAGAAACATTCTAACTTTAGAATGTGGGCCATAACAATTAACAAGTAATTAATCTCTTCCTCGTTCAACCAAAACCCCCCGTTTTCAATAAGGAAATCCTGGTCCTGGATAAATCCTAACTGCAACTTCAAGTCTCCAACTCCAACTCCAACTCCAACTCCAACTGAATCATGGAACTCACCCTCTTCTCTCACTACCATTCCCAATTTCTCTACAAATCCACTTTTAGTAGAAACTTGATACCCAATACTAGAAATTTGACGTTATTAAATTGCAGTTGCTCATCTTCATCATCATCAAAAGATCCTGCAAAACCAACAACATTATCTTTGACTAATGATGGAAGAAGGGCATTCATGAGTTGTTTACTCATAGCAGCTGGTGGGTTGTGTATCACTGATCTGGCTGGGGCTGTCAGCACAAGTAGAAGAGCTGTAAGGTACTATGACTTGAAGGTTGGAGGCGGGGCAGAAGCTGTAAAGGGATCTCGTGTAGCAGTGCATTATGTTGCTAAATGGAAGGGCATCACTTTTATGACTAGTAGGCAAGGGATGGGAGTTGGCGGAGGAACGCCTTATGGATTTGACGTTGGCCAGTCAGAACGCGGCACAGTTCTTAAGGGGCTAGATCTTGGTGTTCAAGGAATGAAAGTGGGTGGCCAGAGAATATTGGTAGTTCCTCCAGAACTAGCATATGGGAAGAAAGGAATCCAAGAAATCCCTCCAAATGCAACAATTGAGTTCGACGTGGAACTATTGTCAATCAAGCAAAGTCCTTTCGGGTCTCCAGTAAAGCTCGTGGAAGGATGAAATGATCCTATTCGTGTATGGACAACTATTGTTCAATTTCTTTGACTGCAAATATTGTTTCTTGCGGATGAAGATTCTTCTCAACTATCCAACATTTTTTGTCAGTTTATCCTTGTATAATCTTCAAATATATCAAGCGATGTCAGAATAATATCAAGCCAACATTTGTAATGTCTATCCGCAAAATGTTATTCTCCAAGTTTGCAAGTGTTACCCAAGTACTTGTAGATTAGATAGAGTAATAGATTTGCAAGAAATAAGCATTGATCATTTTCATGTTGTTTTTTTGTTCTACTTCGAGGAGTTCCCACTGCCTTGCAAGAAATAAGACGGGAGTTTGCTTGGGTACCTCGATGGCCAACATTCCTCCCATTTGAGGTTTTTTCCATTCCCAAGGCTCGAACCCGAGACCTTTTGGTTAAGCATTGATCATTTCGTCTAAATGAAACTCCATTGCACTCCATAACATAAGTTCATATGTCTAACACGCATTAAATTATTTATTCTCCAC

Coding sequence (CDS)

ATGGAACTCACCCTCTTCTCTCACTACCATTCCCAATTTCTCTACAAATCCACTTTTAGTAGAAACTTGATACCCAATACTAGAAATTTGACGTTATTAAATTGCAGTTGCTCATCTTCATCATCATCAAAAGATCCTGCAAAACCAACAACATTATCTTTGACTAATGATGGAAGAAGGGCATTCATGAGTTGTTTACTCATAGCAGCTGGTGGGTTGTGTATCACTGATCTGGCTGGGGCTGTCAGCACAAGTAGAAGAGCTGTAAGGTACTATGACTTGAAGGTTGGAGGCGGGGCAGAAGCTGTAAAGGGATCTCGTGTAGCAGTGCATTATGTTGCTAAATGGAAGGGCATCACTTTTATGACTAGTAGGCAAGGGATGGGAGTTGGCGGAGGAACGCCTTATGGATTTGACGTTGGCCAGTCAGAACGCGGCACAGTTCTTAAGGGGCTAGATCTTGGTGTTCAAGGAATGAAAGTGGGTGGCCAGAGAATATTGGTAGTTCCTCCAGAACTAGCATATGGGAAGAAAGGAATCCAAGAAATCCCTCCAAATGCAACAATTGAGTTCGACGTGGAACTATTGTCAATCAAGCAAAGTCCTTTCGGGTCTCCAGTAAAGCTCGTGGAAGGATGA

Protein sequence

MELTLFSHYHSQFLYKSTFSRNLIPNTRNLTLLNCSCSSSSSSKDPAKPTTLSLTNDGRRAFMSCLLIAAGGLCITDLAGAVSTSRRAVRYYDLKVGGGAEAVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMKVGGQRILVVPPELAYGKKGIQEIPPNATIEFDVELLSIKQSPFGSPVKLVEG

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo14202	Spo14202	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo14202.1	Spo14202.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14202.1.utr5p.1	Spo14202.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14202.1.CDS.8	Spo14202.1.CDS.8	CDS
Spo14202.1.CDS.7	Spo14202.1.CDS.7	CDS
Spo14202.1.CDS.6	Spo14202.1.CDS.6	CDS
Spo14202.1.CDS.5	Spo14202.1.CDS.5	CDS
Spo14202.1.CDS.4	Spo14202.1.CDS.4	CDS
Spo14202.1.CDS.3	Spo14202.1.CDS.3	CDS
Spo14202.1.CDS.2	Spo14202.1.CDS.2	CDS
Spo14202.1.CDS.1	Spo14202.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14202.1.utr3p.1	Spo14202.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14202.1.exon.8	Spo14202.1.exon.8	exon
Spo14202.1.exon.7	Spo14202.1.exon.7	exon
Spo14202.1.exon.6	Spo14202.1.exon.6	exon
Spo14202.1.exon.5	Spo14202.1.exon.5	exon
Spo14202.1.exon.4	Spo14202.1.exon.4	exon
Spo14202.1.exon.3	Spo14202.1.exon.3	exon
Spo14202.1.exon.2	Spo14202.1.exon.2	exon
Spo14202.1.exon.1	Spo14202.1.exon.1	exon

Homology

[Close]

BLAST of Spo14202.1 vs. NCBI nr
Match: gi|870854680|gb|KMT06435.1| (hypothetical protein BVRB_7g161060 isoform B [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 333.6 bits (854), Expect = 2.600e-88
Identity = 175/231 (75.76%), Postives = 192/231 (83.12%), Query Frame = 1


		  
Query: 1   MELTLFSHYHSQFLYKSTF--SRNLIPNTRNLTLLNCSCSSSSSSKDPAKPTTLSLTNDG 60
           MELTLFSH+HS F +KST   S N IP+ RN+T+L CSCSS+ +    AKP TLSL  DG
Sbjct: 1   MELTLFSHHHSHFTHKSTLFPSSNKIPSCRNITVLCCSCSSNHT----AKPITLSLATDG 60

Query: 61  RRAFMSCLLIAAGGLCITDLAGAVSTSRRAVR-----------------YYDLKVGGGAE 120
           RRAFM+C LIAA GLCI D+AGAVSTSRRA+R                 YYDLKVGGGA+
Sbjct: 61  RRAFMNCFLIAAAGLCIADVAGAVSTSRRALRGAKIPESEFTTLSNGLKYYDLKVGGGAQ 120

Query: 121 AVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMKV 180
           AVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGTPYGFD+GQSERGTVLKGLDLGV+GMKV
Sbjct: 121 AVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGTPYGFDIGQSERGTVLKGLDLGVEGMKV 180

Query: 181 GGQRILVVPPELAYGKKGIQEIPPNATIEFDVELLSIKQSPFGSPVKLVEG 213
           GGQR+L+VPP+LAYG KG+QEIPPNATIE DVELLSIKQSPFGSPVKLVEG
Sbjct: 181 GGQRLLIVPPQLAYGSKGVQEIPPNATIELDVELLSIKQSPFGSPVKLVEG 227

[Close]

BLAST of Spo14202.1 vs. NCBI nr
Match: gi|731345524|ref|XP_010683964.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic, partial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 308.9 bits (790), Expect = 6.800e-81
Identity = 159/206 (77.18%), Postives = 174/206 (84.47%), Query Frame = 1


		  
Query: 24  IPNTRNLTLLNCSCSSSSSSKDPAKPTTLSLTNDGRRAFMSCLLIAAGGLCITDLAGAVS 83
           IP+ RN+T+L CSCSS+ +    AKP TLSL  DGRRAFM+C LIAA GLCI D+AGAVS
Sbjct: 11  IPSCRNITVLCCSCSSNHT----AKPITLSLATDGRRAFMNCFLIAAAGLCIADVAGAVS 70

Query: 84  TSRRAVR-----------------YYDLKVGGGAEAVKGSRVAVHYVAKWKGITFMTSRQ 143
           TSRRA+R                 YYDLKVGGGA+AVKGSRVAVHYVAKWKGITFMTSRQ
Sbjct: 71  TSRRALRGAKIPESEFTTLSNGLKYYDLKVGGGAQAVKGSRVAVHYVAKWKGITFMTSRQ 130

Query: 144 GMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMKVGGQRILVVPPELAYGKKGIQEIPPN 203
           GMGVGGGTPYGFD+GQSERGTVLKGLDLGV+GMKVGGQR+L+VPP+LAYG KG+QEIPPN
Sbjct: 131 GMGVGGGTPYGFDIGQSERGTVLKGLDLGVEGMKVGGQRLLIVPPQLAYGSKGVQEIPPN 190

Query: 204 ATIEFDVELLSIKQSPFGSPVKLVEG 213
           ATIE DVELLSIKQSPFGSPVKLVEG
Sbjct: 191 ATIELDVELLSIKQSPFGSPVKLVEG 212

[Close]

BLAST of Spo14202.1 vs. NCBI nr
Match: gi|470134433|ref|XP_004303057.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic [Fragaria vesca subsp. vesca])

HSP 1 Score: 283.9 bits (725), Expect = 2.300e-73
Identity = 152/230 (66.09%), Postives = 177/230 (76.96%), Query Frame = 1


		  
Query: 3   LTLFSHYHSQFLYKSTFSRNLIPNT---RNLTLLNCSCSSSSSSKDPAKPTTLSLTNDGR 62
           + LF  ++   L+K  FS  +   T   RN  +L C CSSSSSS D  KPT+ SL ++GR
Sbjct: 1   MELFFLHNPTVLHKPLFSVPITVKTLPKRNSQVLPCQCSSSSSSDDDTKPTSQSLHSEGR 60

Query: 63  RAFMSCLLIAAGGLCITDLAGAVSTSRRAVR-----------------YYDLKVGGGAEA 122
           RA +  LL +A G+ + D+A AVSTSRRA+R                 YYDLKVG GAEA
Sbjct: 61  RALIGSLLTSAAGIYVCDVAEAVSTSRRALRGSKIPLEEFTTLPNGLKYYDLKVGNGAEA 120

Query: 123 VKGSRVAVHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMKVG 182
           VKGSRVAVHYVAKWKGITFMTSRQG+GVGGGTPYGFDVGQSERG+VLKGLD+GV+GM+VG
Sbjct: 121 VKGSRVAVHYVAKWKGITFMTSRQGLGVGGGTPYGFDVGQSERGSVLKGLDIGVKGMRVG 180

Query: 183 GQRILVVPPELAYGKKGIQEIPPNATIEFDVELLSIKQSPFGSPVKLVEG 213
           GQR+L+VPPELAYG KG+QEIPPNATIE DVELL+IKQSPFGSPVK+VEG
Sbjct: 181 GQRLLIVPPELAYGSKGVQEIPPNATIELDVELLAIKQSPFGSPVKIVEG 230

[Close]

BLAST of Spo14202.1 vs. NCBI nr
Match: gi|734436609|gb|KHN48215.1| (Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic [Glycine soja])

HSP 1 Score: 283.1 bits (723), Expect = 4.000e-73
Identity = 149/233 (63.95%), Postives = 174/233 (74.68%), Query Frame = 1


		  
Query: 1   MELTLFSHYHSQFLYKS----TFSRNLIPNTRNLTLLNCSCSSSSSSKDPAKPTTLSLTN 60
           M+L++F H H   +       T +   + N  +   L C CS SS+SK  A+P T+SL+ 
Sbjct: 1   MKLSVFHHQHHPMILNCPLTLTRTHKRLYNNGSYRWLPCHCSHSSTSKTAAEPVTVSLSI 60

Query: 61  DGRRAFMSCLLIAAGGLCITDLAGAVSTSRRAVR-----------------YYDLKVGGG 120
           +GRRA +SCLL    G+   D+AGAVSTSRRA+R                 YYDLKVG G
Sbjct: 61  EGRRALLSCLLTTVAGVYACDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGNG 120

Query: 121 AEAVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGM 180
           AEA  GSRVA+HYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGM
Sbjct: 121 AEAKMGSRVAIHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGM 180

Query: 181 KVGGQRILVVPPELAYGKKGIQEIPPNATIEFDVELLSIKQSPFGSPVKLVEG 213
           +VGGQR+L+VPPELAYG KG+QEIPPN+TIE D+ELLSIKQSPFG+PVK+VEG
Sbjct: 181 RVGGQRLLIVPPELAYGSKGVQEIPPNSTIELDIELLSIKQSPFGTPVKIVEG 233

[Close]

BLAST of Spo14202.1 vs. NCBI nr
Match: gi|951025741|ref|XP_014513750.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic isoform X1 [Vigna radiata var. radiata])

HSP 1 Score: 281.2 bits (718), Expect = 1.500e-72
Identity = 151/234 (64.53%), Postives = 176/234 (75.21%), Query Frame = 1


		  
Query: 1   MELTLFSHYHSQFLYK----STFSRNLIPNTRNLTLLNCSCSSSSSSKDPAKPTTLS-LT 60
           MEL+LF H H   ++     S    +   N +N   L+C CS SS+    A+P T+S L+
Sbjct: 1   MELSLFHHQHHPMMFLNCPISLTRTHTRLNKKNSYRLSCHCSCSSTKNTTAEPVTVSSLS 60

Query: 61  NDGRRAFMSCLLIAAGGLCITDLAGAVSTSRRAVR-----------------YYDLKVGG 120
            +GRRAF+SCLL    G+   D+AGAVSTSRRA+R                 YYDLKVG 
Sbjct: 61  IEGRRAFLSCLLTTFCGVYACDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGN 120

Query: 121 GAEAVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQG 180
           GAEA KGSRVA+HYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGV+G
Sbjct: 121 GAEAKKGSRVAIHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVEG 180

Query: 181 MKVGGQRILVVPPELAYGKKGIQEIPPNATIEFDVELLSIKQSPFGSPVKLVEG 213
           M+VGGQR+L+VPPELAYG KG+QEIPPN+TIE D+ELLSIKQSPFG+PVK+VEG
Sbjct: 181 MRVGGQRLLIVPPELAYGSKGVQEIPPNSTIELDIELLSIKQSPFGTPVKIVEG 234

[Close]

BLAST of Spo14202.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BY40_BETVU (Peptidyl-prolyl cis-trans isomerase OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g161060 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.800e-88
Identity = 175/231 (75.76%), Postives = 192/231 (83.12%), Query Frame = 1


		  
Query: 1   MELTLFSHYHSQFLYKSTF--SRNLIPNTRNLTLLNCSCSSSSSSKDPAKPTTLSLTNDG 60
           MELTLFSH+HS F +KST   S N IP+ RN+T+L CSCSS+ +    AKP TLSL  DG
Sbjct: 1   MELTLFSHHHSHFTHKSTLFPSSNKIPSCRNITVLCCSCSSNHT----AKPITLSLATDG 60

Query: 61  RRAFMSCLLIAAGGLCITDLAGAVSTSRRAVR-----------------YYDLKVGGGAE 120
           RRAFM+C LIAA GLCI D+AGAVSTSRRA+R                 YYDLKVGGGA+
Sbjct: 61  RRAFMNCFLIAAAGLCIADVAGAVSTSRRALRGAKIPESEFTTLSNGLKYYDLKVGGGAQ 120

Query: 121 AVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMKV 180
           AVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGTPYGFD+GQSERGTVLKGLDLGV+GMKV
Sbjct: 121 AVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGTPYGFDIGQSERGTVLKGLDLGVEGMKV 180

Query: 181 GGQRILVVPPELAYGKKGIQEIPPNATIEFDVELLSIKQSPFGSPVKLVEG 213
           GGQR+L+VPP+LAYG KG+QEIPPNATIE DVELLSIKQSPFGSPVKLVEG
Sbjct: 181 GGQRLLIVPPQLAYGSKGVQEIPPNATIELDVELLSIKQSPFGSPVKLVEG 227

[Close]

BLAST of Spo14202.1 vs. UniProtKB/TrEMBL
Match: A0A0B2STL6_GLYSO (Peptidyl-prolyl cis-trans isomerase OS=Glycine soja GN=glysoja_007884 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 2.800e-73
Identity = 149/233 (63.95%), Postives = 174/233 (74.68%), Query Frame = 1


		  
Query: 1   MELTLFSHYHSQFLYKS----TFSRNLIPNTRNLTLLNCSCSSSSSSKDPAKPTTLSLTN 60
           M+L++F H H   +       T +   + N  +   L C CS SS+SK  A+P T+SL+ 
Sbjct: 1   MKLSVFHHQHHPMILNCPLTLTRTHKRLYNNGSYRWLPCHCSHSSTSKTAAEPVTVSLSI 60

Query: 61  DGRRAFMSCLLIAAGGLCITDLAGAVSTSRRAVR-----------------YYDLKVGGG 120
           +GRRA +SCLL    G+   D+AGAVSTSRRA+R                 YYDLKVG G
Sbjct: 61  EGRRALLSCLLTTVAGVYACDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGNG 120

Query: 121 AEAVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGM 180
           AEA  GSRVA+HYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGM
Sbjct: 121 AEAKMGSRVAIHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGM 180

Query: 181 KVGGQRILVVPPELAYGKKGIQEIPPNATIEFDVELLSIKQSPFGSPVKLVEG 213
           +VGGQR+L+VPPELAYG KG+QEIPPN+TIE D+ELLSIKQSPFG+PVK+VEG
Sbjct: 181 RVGGQRLLIVPPELAYGSKGVQEIPPNSTIELDIELLSIKQSPFGTPVKIVEG 233

[Close]

BLAST of Spo14202.1 vs. UniProtKB/TrEMBL
Match: D7TIX8_VITVI (Peptidyl-prolyl cis-trans isomerase OS=Vitis vinifera GN=VIT_08s0007g04340 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.100e-72
Identity = 155/234 (66.24%), Postives = 177/234 (75.64%), Query Frame = 1


		  
Query: 1   MELTLFS-HYHSQFLYKSTFSRNLIPNTR----NLTLLNCSCSSSSSSKDPAKPTTLSLT 60
           MEL+L S H  +  L    FS   I   R    N ++L C CS S SS D AKP TLSL 
Sbjct: 1   MELSLLSGHQLNPTLLHKNFSPLPITRKRSFKRNSSVLFCQCSFS-SSDDSAKPATLSLQ 60

Query: 61  NDGRRAFMSCLLIAAGGLCITDLAGAVSTSRRAVR-----------------YYDLKVGG 120
            +GRRA M C+L+AA G+ + D+AGAVSTSRRA+R                 YYDLKVGG
Sbjct: 61  REGRRALMGCVLVAAAGIYVCDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGG 120

Query: 121 GAEAVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQG 180
           G +AVKGSRVAVHYVAKWKGITFMTSRQG+GVGGGTPYGFDVGQSERG+VLKGLDLGV+G
Sbjct: 121 GLKAVKGSRVAVHYVAKWKGITFMTSRQGLGVGGGTPYGFDVGQSERGSVLKGLDLGVEG 180

Query: 181 MKVGGQRILVVPPELAYGKKGIQEIPPNATIEFDVELLSIKQSPFGSPVKLVEG 213
           MKVGGQR+L+VPPELAYG KG+QEIPPNATIE DVELL+IKQSP G+ VK++EG
Sbjct: 181 MKVGGQRLLIVPPELAYGSKGVQEIPPNATIELDVELLAIKQSPLGTGVKIIEG 233

[Close]

BLAST of Spo14202.1 vs. UniProtKB/TrEMBL
Match: A0A0B2RW45_GLYSO (Peptidyl-prolyl cis-trans isomerase OS=Glycine soja GN=glysoja_041046 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.400e-72
Identity = 148/233 (63.52%), Postives = 174/233 (74.68%), Query Frame = 1


		  
Query: 1   MELTLFSHYHSQFLYKS----TFSRNLIPNTRNLTLLNCSCSSSSSSKDPAKPTTLSLTN 60
           M+L++F H H   +       T +   + N  +   L C CS SS++K  A+P T+SL+ 
Sbjct: 1   MKLSVFHHQHHPMILNCPLTLTRTHKRLNNKGSYRWLPCHCSHSSTNKIAAEPVTVSLSI 60

Query: 61  DGRRAFMSCLLIAAGGLCITDLAGAVSTSRRAVR-----------------YYDLKVGGG 120
           +GRRA +SCLL    G+   D+AGAVSTSRRA+R                 YYDLKVG G
Sbjct: 61  EGRRALLSCLLTTVVGVYACDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGNG 120

Query: 121 AEAVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGM 180
           AEA KGSRVA+HYVAKWK ITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGM
Sbjct: 121 AEAKKGSRVAIHYVAKWKSITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGM 180

Query: 181 KVGGQRILVVPPELAYGKKGIQEIPPNATIEFDVELLSIKQSPFGSPVKLVEG 213
           +VGGQR+L+VPPELAYG KG+QEIPPN+TIE D+ELLSIKQSPFG+PVK+VEG
Sbjct: 181 RVGGQRLLIVPPELAYGSKGVQEIPPNSTIELDIELLSIKQSPFGTPVKIVEG 233

[Close]

BLAST of Spo14202.1 vs. UniProtKB/TrEMBL
Match: I1L950_SOYBN (Peptidyl-prolyl cis-trans isomerase OS=Glycine max GN=GLYMA_10G063800 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.400e-72
Identity = 148/233 (63.52%), Postives = 174/233 (74.68%), Query Frame = 1


		  
Query: 1   MELTLFSHYHSQFLYKS----TFSRNLIPNTRNLTLLNCSCSSSSSSKDPAKPTTLSLTN 60
           M+L++F H H   +       T +   + N  +   L C CS SS++K  A+P T+SL+ 
Sbjct: 1   MKLSVFHHQHHPMILNCPLTLTRTHKRLNNKGSYRWLPCHCSHSSTNKIAAEPVTVSLSI 60

Query: 61  DGRRAFMSCLLIAAGGLCITDLAGAVSTSRRAVR-----------------YYDLKVGGG 120
           +GRRA +SCLL    G+   D+AGAVSTSRRA+R                 YYDLKVG G
Sbjct: 61  EGRRALLSCLLTTVVGVYACDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGNG 120

Query: 121 AEAVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGM 180
           AEA KGSRVA+HYVAKWK ITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGM
Sbjct: 121 AEAKKGSRVAIHYVAKWKSITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGM 180

Query: 181 KVGGQRILVVPPELAYGKKGIQEIPPNATIEFDVELLSIKQSPFGSPVKLVEG 213
           +VGGQR+L+VPPELAYG KG+QEIPPN+TIE D+ELLSIKQSPFG+PVK+VEG
Sbjct: 181 RVGGQRLLIVPPELAYGSKGVQEIPPNSTIELDIELLSIKQSPFGTPVKIVEG 233

[Close]

BLAST of Spo14202.1 vs. ExPASy Swiss-Prot
Match: FK164_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-4 PE=1 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.600e-66
Identity = 133/198 (67.17%), Postives = 150/198 (75.76%), Query Frame = 1


		  
Query: 35  CSCSSSSSSKDPAKPTTLS---LTNDGRRAFMSCLLIAAGGLCITDLAGAVSTSRRAVR- 94
           CS  S    K     T L    ++ +GRR  + CLL  A G+  T  A AVSTSRRA+R 
Sbjct: 33  CSLPSPGCEKVIRTETVLPPAPVSCEGRRVLLGCLLATASGILSTGSAEAVSTSRRALRA 92

Query: 95  ----------------YYDLKVGGGAEAVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGT 154
                           YYD+KVG GAEAVKGSRVAVHYVAKWKGITFMTSRQG+GVGGGT
Sbjct: 93  SKLPESDFTTLPNGLKYYDIKVGNGAEAVKGSRVAVHYVAKWKGITFMTSRQGLGVGGGT 152

Query: 155 PYGFDVGQSERGTVLKGLDLGVQGMKVGGQRILVVPPELAYGKKGIQEIPPNATIEFDVE 213
           PYGFDVGQSERG VLKGLDLGV+GM+VGGQR+++VPPELAYGKKG+QEIPPNATIE D+E
Sbjct: 153 PYGFDVGQSERGNVLKGLDLGVEGMRVGGQRLVIVPPELAYGKKGVQEIPPNATIELDIE 212

[Close]

BLAST of Spo14202.1 vs. ExPASy Swiss-Prot
Match: FKBP4_NEUCR (FK506-binding protein 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fkr-4 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.500e-16
Identity = 48/108 (44.44%), Postives = 67/108 (62.04%), Query Frame = 1


		  
Query: 93  DLKVGGGAEAVKGSRVAVHYVAKWK-GITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKG 152
           D KVG G  A  G RV + Y+ K + G  F ++++G       P+ F +G   +G V+KG
Sbjct: 369 DRKVGTGRAAKNGDRVGMRYIGKLQNGKVFDSNKKG------APFSFKLG---KGEVIKG 428

Query: 153 LDLGVQGMKVGGQRILVVPPELAYGKKGIQEIPPNATIEFDVELLSIK 200
            D+GV GM VGG+R L +P  LAYG + +  IPPN+T+ FDV+LL IK
Sbjct: 429 WDIGVAGMAVGGERRLTIPAHLAYGSRALPGIPPNSTLIFDVKLLEIK 467

[Close]

BLAST of Spo14202.1 vs. ExPASy Swiss-Prot
Match: FKBP3_YARLI (FK506-binding protein 3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=FPR3 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.500e-16
Identity = 48/112 (42.86%), Postives = 71/112 (63.39%), Query Frame = 1


		  
Query: 89  VRYYDLKVGGGAEAVKGSRVAVHYVAKW-KGITFMTSRQGMGVGGGTPYGFDVGQSERGT 148
           V+  D  VG G  A  GS+V V YV K   G  F ++ +G       P+ F VG   +G 
Sbjct: 305 VKIEDRTVGEGPSAKVGSKVGVRYVGKLANGKVFDSNSKGK------PFYFSVG---KGE 364

Query: 149 VLKGLDLGVQGMKVGGQRILVVPPELAYGKKGIQEIPPNATIEFDVELLSIK 200
           V++G D+GVQGMKV G+R +++PP +AYGK+ +  IPPN+ + FDV++++IK
Sbjct: 365 VIRGWDIGVQGMKVKGERRIIIPPGMAYGKQKLPGIPPNSQLTFDVKVVNIK 407

[Close]

BLAST of Spo14202.1 vs. ExPASy Swiss-Prot
Match: FKBP4_ASPFU (FK506-binding protein 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=fpr4 PE=3 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 7.600e-16
Identity = 47/114 (41.23%), Postives = 70/114 (61.40%), Query Frame = 1


		  
Query: 87  RAVRYYDLKVGGGAEAVKGSRVAVHYVAKWK-GITFMTSRQGMGVGGGTPYGFDVGQSER 146
           + V+  D K+G G  A  G+ VA+ Y+ K + G  F  +++G       P+ F +G   +
Sbjct: 385 KGVKIDDKKLGKGPAAKAGNTVAMRYIGKLEDGKVFDANKKGK------PFTFKLG---K 444

Query: 147 GTVLKGLDLGVQGMKVGGQRILVVPPELAYGKKGIQEIPPNATIEFDVELLSIK 200
           G V+KG D+G+ GM VGG+R + +PP LAYGKK +  IP N+ + FDV+LL IK
Sbjct: 445 GEVIKGWDIGIAGMAVGGERRITIPPHLAYGKKALPGIPANSKLIFDVKLLEIK 489

[Close]

BLAST of Spo14202.1 vs. ExPASy Swiss-Prot
Match: FKBP4_EMENI (FK506-binding protein 4 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fpr4 PE=3 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 1.000e-15
Identity = 47/108 (43.52%), Postives = 68/108 (62.96%), Query Frame = 1


		  
Query: 93  DLKVGGGAEAVKGSRVAVHYVAKWK-GITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKG 152
           D K+G G  A  G+ VA+ Y+ K + G  F ++++G       P+ F +G   +G V+KG
Sbjct: 381 DKKLGKGPAAASGNTVAMRYIGKLENGKVFDSNKKGK------PFTFKLG---KGEVIKG 440

Query: 153 LDLGVQGMKVGGQRILVVPPELAYGKKGIQEIPPNATIEFDVELLSIK 200
            D+GV GM VGG+R + +P  LAYGKKG+  IP N+ + FDV+LL IK
Sbjct: 441 WDIGVAGMAVGGERRITIPSHLAYGKKGVPGIPGNSKLIFDVKLLEIK 479

[Close]

BLAST of Spo14202.1 vs. TAIR (Arabidopsis)
Match: AT3G10060.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 252.7 bits (644), Expect = 2.000e-67
Identity = 133/198 (67.17%), Postives = 150/198 (75.76%), Query Frame = 1


		  
Query: 35  CSCSSSSSSKDPAKPTTLS---LTNDGRRAFMSCLLIAAGGLCITDLAGAVSTSRRAVR- 94
           CS  S    K     T L    ++ +GRR  + CLL  A G+  T  A AVSTSRRA+R 
Sbjct: 33  CSLPSPGCEKVIRTETVLPPAPVSCEGRRVLLGCLLATASGILSTGSAEAVSTSRRALRA 92

Query: 95  ----------------YYDLKVGGGAEAVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGT 154
                           YYD+KVG GAEAVKGSRVAVHYVAKWKGITFMTSRQG+GVGGGT
Sbjct: 93  SKLPESDFTTLPNGLKYYDIKVGNGAEAVKGSRVAVHYVAKWKGITFMTSRQGLGVGGGT 152

Query: 155 PYGFDVGQSERGTVLKGLDLGVQGMKVGGQRILVVPPELAYGKKGIQEIPPNATIEFDVE 213
           PYGFDVGQSERG VLKGLDLGV+GM+VGGQR+++VPPELAYGKKG+QEIPPNATIE D+E
Sbjct: 153 PYGFDVGQSERGNVLKGLDLGVEGMRVGGQRLVIVPPELAYGKKGVQEIPPNATIELDIE 212

[Close]

BLAST of Spo14202.1 vs. TAIR (Arabidopsis)
Match: AT1G20810.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 83.6 bits (205), Expect = 1.600e-16
Identity = 49/144 (34.03%), Postives = 75/144 (52.08%), Query Frame = 1


		  
Query: 83  STSRRAVRYYDLKVGGGAEAVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGT----PYGF 142
           ST    +++YD++ G G  A +GS   VH+  +++ IT +++R+   + G      PY F
Sbjct: 86  STGPEGLKFYDIEEGKGPVATEGSTAQVHFDCRYRSITAISTRESKLLAGNRSIAQPYEF 145

Query: 143 DVGQS---ERGTVLKGLDLGV-----------------QGMKVGGQRILVVPPELAYGKK 202
            VG +   ER         G+                 +GMKVGG+R ++VPPE  YG+K
Sbjct: 146 KVGSTPGKERKREFVDNPNGLFSAQAAPKPPPAMYFITEGMKVGGKRTVIVPPEAGYGQK 205

[Close]

BLAST of Spo14202.1 vs. TAIR (Arabidopsis)
Match: AT5G05420.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 79.3 bits (194), Expect = 3.100e-15
Identity = 44/107 (41.12%), Postives = 62/107 (57.94%), Query Frame = 1


		  
Query: 99  GAEAVKGSRVAVHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQS------ERGTVLKGL 158
           G +A  G RV+VHY  K +G              G  +   VG+S      + G V+KGL
Sbjct: 50  GKKAEPGKRVSVHYTGKLQG-------------NGKIFDSTVGKSRYKFRLDAGKVIKGL 109

Query: 159 DLGVQGMKVGGQRILVVPPELAYGKKGIQEIPPNATIEFDVELLSIK 200
           D+G+ GM VGG+R L +PPE+ YG +G   IPP++ + FDVELL++K
Sbjct: 110 DVGLNGMLVGGKRKLTIPPEMGYGAEGAGSIPPDSWLVFDVELLNVK 143

[Close]

BLAST of Spo14202.1 vs. TAIR (Arabidopsis)
Match: AT5G48570.1 (FKBP-type peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 75.1 bits (183), Expect = 5.800e-14
Identity = 45/95 (47.37%), Postives = 57/95 (60.00%), Query Frame = 1


		  
Query: 105 GSRVAVHYVAKW-KGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMKVGG 164
           G  V VHY      G  F +SR       GTP+ F +GQ   G V+KG DLG++ MK G 
Sbjct: 65  GDEVEVHYTGTLLDGTKFDSSRDR-----GTPFKFTLGQ---GHVIKGWDLGIKTMKKGE 124

Query: 165 QRILVVPPELAYGKKGI-QEIPPNATIEFDVELLS 198
             I  +PPELAYG+ G    IPPNAT++FDVEL++
Sbjct: 125 NAIFTIPPELAYGETGSPPTIPPNATLQFDVELIA 151

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BLAST of Spo14202.1 vs. TAIR (Arabidopsis)
Match: AT3G25230.2 (rotamase FKBP 1)

HSP 1 Score: 68.6 bits (166), Expect = 5.400e-12
Identity = 46/106 (43.40%), Postives = 59/106 (55.66%), Query Frame = 1


		  
Query: 94  LKVGGGAEAVK-GSRVAVHYVAKW-KGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKG 153
           LK G G E  + G  V VHY      G  F +SR        TP+ F +GQ   G V+KG
Sbjct: 45  LKEGEGYETPENGDEVEVHYTGTLLDGTKFDSSRDR-----ATPFKFTLGQ---GQVIKG 104

Query: 154 LDLGVQGMKVGGQRILVVPPELAYGKKGI-QEIPPNATIEFDVELL 197
            D+G++ MK G   +  +P ELAYG+ G    IP NAT++FDVELL
Sbjct: 105 WDIGIKTMKKGENAVFTIPAELAYGESGSPPTIPANATLQFDVELL 142

The following BLAST results are available for this feature:

BLAST of Spo14202.1 vs. NCBI nr
BLAST of Spo14202.1 vs. UniProtKB/TrEMBL
BLAST of Spo14202.1 vs. ExPASy Swiss-Prot
BLAST of Spo14202.1 vs. TAIR (Arabidopsis)

BLAST of Spo14202.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|870854680\|gb\|KMT06435.1\|	2.6e-88	75.7	hypothetical protein BVRB_7g16...	[more]
gi\|731345524\|ref\|XP_010683964.1\|	6.8e-81	77.1	PREDICTED: peptidyl-prolyl cis...	[more]
gi\|470134433\|ref\|XP_004303057.1\|	2.3e-73	66.0	PREDICTED: peptidyl-prolyl cis...	[more]
gi\|734436609\|gb\|KHN48215.1\|	4.0e-73	63.9	Peptidyl-prolyl cis-trans isom...	[more]
gi\|951025741\|ref\|XP_014513750.1\|	1.5e-72	64.5	PREDICTED: peptidyl-prolyl cis...	[more]

BLAST of Spo14202.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8BY40_BETVU	1.8e-88	75.7	Peptidyl-prolyl cis-trans isom...	[more]
A0A0B2STL6_GLYSO	2.8e-73	63.9	Peptidyl-prolyl cis-trans isom...	[more]
D7TIX8_VITVI	1.1e-72	66.2	Peptidyl-prolyl cis-trans isom...	[more]
A0A0B2RW45_GLYSO	2.4e-72	63.5	Peptidyl-prolyl cis-trans isom...	[more]
I1L950_SOYBN	2.4e-72	63.5	Peptidyl-prolyl cis-trans isom...	[more]

BLAST of Spo14202.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
FK164_ARATH	3.6e-66	67.1	Peptidyl-prolyl cis-trans isom...	[more]
FKBP4_NEUCR	1.5e-16	44.4	FK506-binding protein 4 OS=Neu...	[more]
FKBP3_YARLI	4.5e-16	42.8	FK506-binding protein 3 OS=Yar...	[more]
FKBP4_ASPFU	7.6e-16	41.2	FK506-binding protein 4 OS=Neo...	[more]
FKBP4_EMENI	1.0e-15	43.5	FK506-binding protein 4 OS=Eme...	[more]

BLAST of Spo14202.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G10060.1	2.0e-67	67.1	FKBP-like peptidyl-prolyl cis-...	[more]
AT1G20810.1	1.6e-16	34.0	FKBP-like peptidyl-prolyl cis-...	[more]
AT5G05420.1	3.1e-15	41.1	FKBP-like peptidyl-prolyl cis-...	[more]
AT5G48570.1	5.8e-14	47.3	FKBP-type peptidyl-prolyl cis-...	[more]
AT3G25230.2	5.4e-12	43.4	rotamase FKBP 1	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00254	FKBP_C	coord: 101..196 score: 1.9
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PROFILE	PS50059	FKBP_PPIASE	coord: 105..199 score: 24
IPR023566	Peptidyl-prolyl cis-trans isomerase, FKBP-type	PANTHER	PTHR10516	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 1..205 score: 1.1E
None	No IPR available	GENE3D	3.10.50.40		coord: 83..200 score: 4.8
None	No IPR available	PANTHER	PTHR10516:SF323	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC	coord: 1..205 score: 1.1E
None	No IPR available	unknown	SSF54534	FKBP-like	coord: 85..199 score: 8.25

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0042631	cellular response to water deprivation
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
cellular_component	GO:0009543	chloroplast thylakoid lumen
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity