Spo14348.1 (mRNA) | SpinachBase

Overview


Name	Spo14348.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Transcription elongation factor A protein 2
Location	chr3 : 12445164 .. 12449857 (+)
Sequence length	1997

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTAAGTAAGAACGATGCTCGGATTCTAGAGAGAAGTTCTCTAAAAGAGTAGTCTTAAGGCGATAAATTGGACGTACCTTGAGGTGTGAGCCTTCGTGGCCTATTTATAGTGTTTGCATAATAAATGCCCATAGGTCATTTATTGCTATTGGGCCTTGGGCCTTAATGGATGGCTGAATAGCCATAGTGGTAAGGTTTGATGCTGTTGTTTAGAGCCATTGGGCTTTGGACTTAGTGGCCCAATTGAATATCAATTGGGAGCTCAAACACTTATAAATAATGTACCATTATAATGAAAAAAATGTGCTAAGCCATGAGAAAGTGCTTAGAGAACCATCACCACTCTAGGCGAGCCGGGATATCGAGAGTGGTCGCTATGAGCAACGACTTACGACACAACTGGGTCGCCACGGGCACGGGCTAGAACCAAACCTTTGATAGTTTGATAATTTAACCCTCACACAAACTAACTACGGAATTAGGTAACAAAAACGGTTTGCAAAACCTAAGAATTGGACTACGAATAGAAATAGGATAAAACTAGCTTGGTTTGTCTTGTCTTCGGTTTGAAGCTCAAAAAAACAGAATAGCTGCGCAAAACTCACCCTCACCCTCATCTTCATCTTCGTCTACTGTTTGTGTTTCTCTCTCGAATTTTCTGATTTCTTCAATTTTCTCAAGGTTCTTTTCTTATTCTTTCTATAGTAACAATCCCTTTCAAGCTCTTCAATTTTTTCAACCAATGTTATATTATGTTCTTTCGATTTTTTGGTTTGATTCATTACTTTGGTGTTTCAATGATTTACGGTGTTTTTGGTTGATTTTGAGAGCTAATTCTTATGAAATCATGTATTAGTTTGGCTAATATGGAGCTTTTTTTGGTTGCTGATTAGGGTTATCAATTTTATTGTTGTTGACGAAGTTTAGCGATTCCCAAATTAGGGTTTCTGCATTGCGTACGCTTGATAAATATATACGTTAATGTTGAAGGGTTTTTTTTTTTTTCGTGTATGATTTTGTGTCAACGACTCAATAATGATGAACATTTGATGAAAAAAAATATTAATCTTTTGGTTTGATTGAGAATATTCAATGGGAATATGAATATTTATGATTGTATATTGCTGTTTGCAGTTGTTGGGTTTTGAGGAAGAATCTGAGAAATTTTGGTGAGGTTGTAATTAAAAGGAGAAGAAACCGGATAACAGAGGGGAGTGGTAGCGAGTGGAATACGGTGATCAGGAGAATGGAGAGTGAGTTGGTGGAATTGTTTGAGGCCGCCAAGAAGGCGGCAGATGCAGCAGCAGCTGAAGACGTCAGCTCCACCAATGAGGAAAGTCTGTGCCTTGAAGCCTTGAAAGTGCTTAAGGATTTCCCTGTCAATTATCAGATTCTTGTTTCAACTCAGGTTTGTTCGAATTCTATTCTTTTTGTTCCTTCTGTTTCATTGATTTTTAGTAACAATATTATCTTTCATCAAATTCATATATAGGGAGTATGTAGTTCCCAAGTGTTGTCAAAATTTGTACTCCCTTTTTCTCACTGACAATTATCCTGTTAGCATTTTTCTTGTAATCAATCGAGAATCCGAGCCTAATTCTTAATTAAGAACGTGTCAGCTTTGGGAACTTAACTTTAACATTAGACAACTAGAGAACAGACAAATTAACTTATTGGCTTATTGGGTAACCCGAAATTAGCTACTGGTTAACTTCTATTCTGTCTTGGTTTCTGATGCAAAGTTTCCAGTATTGGATGAAACATTGTCTTTTGAAGGGATTGTTTTAATGTTTTCTGTTTTCGGATAGTGAAGGAGAATAATGGGAGTCGCATAAAGCCAATCTATGAACTCCATGGCACTTTTGTAATTTTCTCATAATGTGAGTTTTGGAATTTAATTATCAGTTAGGATATGGTAACAGATAGATGTTGACTAATTATCTGAATTTTGAGCAGATAATTAGTGCCAGCGTAGGATAACCTAGATAGACAGTTGGTATACTAGAACAGCTATCTCTCAACAAATATTGTGGTCTGGTGCTTTTCAAGTTTCCATCTATGAATTGAATAATTCAGTAGAAGTCAGATTGAAATTGCATACTTTTTGTTGCAACATGTCATTTGGGAATGGTAGTTGATTGGGAAGAATGTGGATGGAGATCATTGTGAAAGGTCGTTGGACTCTCATCGGCACATCTTTCTTTGAAAACAAGGATGGATTTCCCGTTTCTTTCTTTTGTTAAAATCATGCTGAATAGTTGAGCTGATGGTCATGTTGGGTGGTTGTGCTGCAGAGTTGCTGCTAAATTGCGAAAAGTGCCTTTGTTATGTTTCATCAGATGTTTCACCAATTTCTTAGACTATGTTGGTATTAGTTTTATGGAGGGAGCAAAATAAAGGAAGGGGGTAGGGGGAGAAAGATTATATTGTATATTTTTTTAGGATAAACGTATTATAAGGAAATGGAAGGGACCATTGTCTACAAAATGTTTCTCATCAATTGGATTCCATAGTCCAGTCTGCTGTTTAGCTGCTTAACCGGAATTTTAAATTTACCAACTAAAGTTAAAACGCACAAGGAAGTCGAATGCCTTTAGATTCCTTAGTATGAATCTCATTTCCAACAAATACTAATCAAATCTTAAATTACCATCGAATCGGTTTAAATTTTCAAAAGCTGTAATTAATATCAAAATTAAAGGGGAAAAGTTAAGGGAGAAGAAGAAAGTGAGTGAAATGAGAGAGAAAATCAGCAGGTATCAGTTATGAAGTTATTTTGCAAGTTTAGAACTTGCTTGCAAAGCTTTCCATCTTAAGGATCTGAATTTGTATAATAGAGGCAGAAGACTTGAAATATTATCATAGTGTTCTGTCACCACTGTATATGCATGCAGCCTTCTCAAAATACAGCATATGTAGATTAGCTTGTCTATGAGCTGCATAAAGACTTCTTTGTTCGAATTTTACTTCACATTCAAAGTCGCTTTTAATATTTTATATTAGGGATATCTGTATCTTTTATTTTATTTTTGTAATTTGAACTGATCGAGTCGATGTGCACTTAATCATCAGGTTGGAAAGCGGCTACGGCATCTTACGAAACATCCTAGAAGGAAGATTCAGAGTTTTGCAGCTGATTTGATTGAGATATGGAAAAACATAATACTTCAGGAAACAGCACAGAAAAAAAATGGTGAAGTTGGTAATAATTCAGTGAAAGTTGTCCCTATAAATGCTGACAGCACCACCAAAGCAATTCCAGTCAAGGCTGAAAAGAGTACATGGGGAGGAAATGGGAAAGTCGAGAAAGTTGAAGAAGGTGTTTCACCCAGACCACGAAAGCTTGCTAAGACCGAACAAGGTCCTGTGGAAAGGAAGTTTGGAAATGGTAATGCAGTAAAGGCTGAAAGTTTGATTTCAGAGGAACCTGTAAAGGTTGAGAGAACAGCAAATCAAGTGAAACCGAGCTCCAGTGCAAATAAACCAGTTGCTAATGCTCCCCCGAAGTTGCCTTCAATGTTGAAGTCTGGTGATGCAACACGTGATAAGGTGCGAGAGCTTCTTTTAGAGGCTCTATCCAAAGTTTGTAACGAGGCACACGAAAGCATTAAAGGAGATGTTGATGCTTGTGACCCGGTTCGAGTGGCTGTATCGGTAGAGTCCGTTATGTTTGATAAGTGGGGCCGTTCCACTGGTGCTCACAAGTTTAAATACAGAAGCATTATGTTTAACATCAAGGATGACAAGAACCCAGATTTTCGCAGGAAAGTCCTTTTAGGGGATATAAAGCCTGAAAGGATTGTCAACTTGACACCTGAAGAAATGGCGAGTGAGCAAAGACGAATAGAGAACCAGAAGATTGAAAAAAAGGCACTATTTGAATGTGAGCGGATGGGTGCACCAAAGGCCACAACTGACCAGTTTAGATGTGGTAGATGTGGTCAGCGCAAGACCACATACCACCAGCTGCAAACTCGGAGTGCTGATGAACCTATGACAACTTTTGTAACTTGTGTTAACTGCAATAATCATTGGAAATTTTGCTGAGCTTAATTTCATGGGTAAAGGCTGGCATTGCCGAGCTGCTTGGCACATAGGAGGTGTTACAATGCTACCGCGTCAGACTTTTACCGACCTGGTTTTTGTTGCCTTCTCTTGTGCAAGTATTTTTGTGGCTCTTGTGCAGTTGCCTGTTTACAGTTCTGCTATTTCTTTTCTGGTATTTGAGGATGGAATCGACATGTTCTTCATTTTTATTTATTTATTTGTTTGTTAGCTGTATGTTAGTTATGTCTCTGATGAGTTTAGATGTGTTTGTAGGATATTATTATAAGTGTTGCTCTTCCATTTGTTCAAGAGATGTTACTTAATTGTCAGATCAGCTCTGGTTGAGCTGTAATTATTTGAACAATTACCTTGACATTGACGAAGTCTATATTTTTACTTCCATATGTTTACTCATGTCTGTGATACATCTTTTGTACAGTTTCTGACAATTTGCAGTAATTCCATCTTTGAGCACGAACTAGCTTTTAATCCTCCCTCAGAAAGGGGCTTGCTCTTATCTCGACCATCAGACATTCAGGCGGCGTCAACCATCCAGGTGCCCATGCTACCAGTAGTACAGAATGCCATATTTTGCTTTGTGAAACCTCAATGGTATATGGAAGATTTCAAACTTCAGCTCCGCT

mRNA sequence

ATGCCTAAAATAGCTGCGCAAAACTCACCCTCACCCTCATCTTCATCTTCGTCTACTGTTTGTGTTTCTCTCTCGAATTTTCTGATTTCTTCAATTTTCTCAAGTTGTTGGGTTTTGAGGAAGAATCTGAGAAATTTTGGTGAGGTTGTAATTAAAAGGAGAAGAAACCGGATAACAGAGGGGAGTGGTAGCGAGTGGAATACGGTGATCAGGAGAATGGAGAGTGAGTTGGTGGAATTGTTTGAGGCCGCCAAGAAGGCGGCAGATGCAGCAGCAGCTGAAGACGTCAGCTCCACCAATGAGGAAAGTCTGTGCCTTGAAGCCTTGAAAGTGCTTAAGGATTTCCCTGTCAATTATCAGATTCTTGTTTCAACTCAGGTTGGAAAGCGGCTACGGCATCTTACGAAACATCCTAGAAGGAAGATTCAGAGTTTTGCAGCTGATTTGATTGAGATATGGAAAAACATAATACTTCAGGAAACAGCACAGAAAAAAAATGGTGAAGTTGGTAATAATTCAGTGAAAGTTGTCCCTATAAATGCTGACAGCACCACCAAAGCAATTCCAGTCAAGGCTGAAAAGAGTACATGGGGAGGAAATGGGAAAGTCGAGAAAGTTGAAGAAGGTGTTTCACCCAGACCACGAAAGCTTGCTAAGACCGAACAAGGTCCTGTGGAAAGGAAGTTTGGAAATGGTAATGCAGTAAAGGCTGAAAGTTTGATTTCAGAGGAACCTGTAAAGGTTGAGAGAACAGCAAATCAAGTGAAACCGAGCTCCAGTGCAAATAAACCAGTTGCTAATGCTCCCCCGAAGTTGCCTTCAATGTTGAAGTCTGGTGATGCAACACGTGATAAGGTGCGAGAGCTTCTTTTAGAGGCTCTATCCAAAGTTTGTAACGAGGCACACGAAAGCATTAAAGGAGATGTTGATGCTTGTGACCCGGTTCGAGTGGCTGTATCGGTAGAGTCCGTTATGTTTGATAAGTGGGGCCGTTCCACTGGTGCTCACAAGTTTAAATACAGAAGCATTATGTTTAACATCAAGGATGACAAGAACCCAGATTTTCGCAGGAAAGTCCTTTTAGGGGATATAAAGCCTGAAAGGATTGTCAACTTGACACCTGAAGAAATGGCGAGTGAGCAAAGACGAATAGAGAACCAGAAGATTGAAAAAAAGGCACTATTTGAATGTGAGCGGATGGGTGCACCAAAGGCCACAACTGACCAGTTTAGATGTGGTAGATGTGGTCAGCGCAAGACCACATACCACCAGCTGCAAACTCGGAGTGCTGATGAACCTATGACAACTTTTGTAACTTGTGTTAACTGCAATAATCATTGGAAATTTTGCTGAGCTTAATTTCATGGGTAAAGGCTGGCATTGCCGAGCTGCTTGGCACATAGGAGGTGTTACAATGCTACCGCGTCAGACTTTTACCGACCTGGTTTTTGTTGCCTTCTCTTGTGCAAGTATTTTTGTGGCTCTTGTGCAGTTGCCTGTTTACAGTTCTGCTATTTCTTTTCTGGTATTTGAGGATGGAATCGACATGTTCTTCATTTTTATTTATTTATTTGTTTGTTAGCTGTATGTTAGTTATGTCTCTGATGAGTTTAGATGTGTTTGTAGGATATTATTATAAGTGTTGCTCTTCCATTTGTTCAAGAGATGTTACTTAATTGTCAGATCAGCTCTGGTTGAGCTGTAATTATTTGAACAATTACCTTGACATTGACGAAGTCTATATTTTTACTTCCATATGTTTACTCATGTCTGTGATACATCTTTTGTACAGTTTCTGACAATTTGCAGTAATTCCATCTTTGAGCACGAACTAGCTTTTAATCCTCCCTCAGAAAGGGGCTTGCTCTTATCTCGACCATCAGACATTCAGGCGGCGTCAACCATCCAGGTGCCCATGCTACCAGTAGTACAGAATGCCATATTTTGCTTTGTGAAACCTCAATGGTATATGGAAGATTTCAAACTTCAGCTCCGCT

Coding sequence (CDS)

ATGCCTAAAATAGCTGCGCAAAACTCACCCTCACCCTCATCTTCATCTTCGTCTACTGTTTGTGTTTCTCTCTCGAATTTTCTGATTTCTTCAATTTTCTCAAGTTGTTGGGTTTTGAGGAAGAATCTGAGAAATTTTGGTGAGGTTGTAATTAAAAGGAGAAGAAACCGGATAACAGAGGGGAGTGGTAGCGAGTGGAATACGGTGATCAGGAGAATGGAGAGTGAGTTGGTGGAATTGTTTGAGGCCGCCAAGAAGGCGGCAGATGCAGCAGCAGCTGAAGACGTCAGCTCCACCAATGAGGAAAGTCTGTGCCTTGAAGCCTTGAAAGTGCTTAAGGATTTCCCTGTCAATTATCAGATTCTTGTTTCAACTCAGGTTGGAAAGCGGCTACGGCATCTTACGAAACATCCTAGAAGGAAGATTCAGAGTTTTGCAGCTGATTTGATTGAGATATGGAAAAACATAATACTTCAGGAAACAGCACAGAAAAAAAATGGTGAAGTTGGTAATAATTCAGTGAAAGTTGTCCCTATAAATGCTGACAGCACCACCAAAGCAATTCCAGTCAAGGCTGAAAAGAGTACATGGGGAGGAAATGGGAAAGTCGAGAAAGTTGAAGAAGGTGTTTCACCCAGACCACGAAAGCTTGCTAAGACCGAACAAGGTCCTGTGGAAAGGAAGTTTGGAAATGGTAATGCAGTAAAGGCTGAAAGTTTGATTTCAGAGGAACCTGTAAAGGTTGAGAGAACAGCAAATCAAGTGAAACCGAGCTCCAGTGCAAATAAACCAGTTGCTAATGCTCCCCCGAAGTTGCCTTCAATGTTGAAGTCTGGTGATGCAACACGTGATAAGGTGCGAGAGCTTCTTTTAGAGGCTCTATCCAAAGTTTGTAACGAGGCACACGAAAGCATTAAAGGAGATGTTGATGCTTGTGACCCGGTTCGAGTGGCTGTATCGGTAGAGTCCGTTATGTTTGATAAGTGGGGCCGTTCCACTGGTGCTCACAAGTTTAAATACAGAAGCATTATGTTTAACATCAAGGATGACAAGAACCCAGATTTTCGCAGGAAAGTCCTTTTAGGGGATATAAAGCCTGAAAGGATTGTCAACTTGACACCTGAAGAAATGGCGAGTGAGCAAAGACGAATAGAGAACCAGAAGATTGAAAAAAAGGCACTATTTGAATGTGAGCGGATGGGTGCACCAAAGGCCACAACTGACCAGTTTAGATGTGGTAGATGTGGTCAGCGCAAGACCACATACCACCAGCTGCAAACTCGGAGTGCTGATGAACCTATGACAACTTTTGTAACTTGTGTTAACTGCAATAATCATTGGAAATTTTGCTGA

Protein sequence

MPKIAAQNSPSPSSSSSSTVCVSLSNFLISSIFSSCWVLRKNLRNFGEVVIKRRRNRITEGSGSEWNTVIRRMESELVELFEAAKKAADAAAAEDVSSTNEESLCLEALKVLKDFPVNYQILVSTQVGKRLRHLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNSVKVVPINADSTTKAIPVKAEKSTWGGNGKVEKVEEGVSPRPRKLAKTEQGPVERKFGNGNAVKAESLISEEPVKVERTANQVKPSSSANKPVANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHESIKGDVDACDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIKPERIVNLTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYHQLQTRSADEPMTTFVTCVNCNNHWKFC

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo14348	Spo14348	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo14348.1	Spo14348.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14348.1.exon.1	Spo14348.1.exon.1	exon
Spo14348.1.exon.2	Spo14348.1.exon.2	exon
Spo14348.1.exon.3	Spo14348.1.exon.3	exon
Spo14348.1.exon.4	Spo14348.1.exon.4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14348.1.CDS.1	Spo14348.1.CDS.1	CDS
Spo14348.1.CDS.2	Spo14348.1.CDS.2	CDS
Spo14348.1.CDS.3	Spo14348.1.CDS.3	CDS
Spo14348.1.CDS.4	Spo14348.1.CDS.4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14348.1.utr3p.1	Spo14348.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo14348.1 vs. NCBI nr
Match: gi|902087057|gb|KNA03243.1| (hypothetical protein SOVF_211060, partial [Spinacia oleracea])

HSP 1 Score: 867.5 bits (2240), Expect = 1.100e-248
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 1


		  
Query: 4   IAAQNSPSPSSSSSSTVCVSLSNFLISSIFSSCWVLRKNLRNFGEVVIKRRRNRITEGSG 63
           IAAQNSPSPSSSSSSTVCVSLSNFLISSIFSSCWVLRKNLRNFGEVVIKRRRNRITEGSG
Sbjct: 1   IAAQNSPSPSSSSSSTVCVSLSNFLISSIFSSCWVLRKNLRNFGEVVIKRRRNRITEGSG 60

Query: 64  SEWNTVIRRMESELVELFEAAKKAADAAAAEDVSSTNEESLCLEALKVLKDFPVNYQILV 123
           SEWNTVIRRMESELVELFEAAKKAADAAAAEDVSSTNEESLCLEALKVLKDFPVNYQILV
Sbjct: 61  SEWNTVIRRMESELVELFEAAKKAADAAAAEDVSSTNEESLCLEALKVLKDFPVNYQILV 120

Query: 124 STQVGKRLRHLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNSVKVVPINADS 183
           STQVGKRLRHLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNSVKVVPINADS
Sbjct: 121 STQVGKRLRHLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNSVKVVPINADS 180

Query: 184 TTKAIPVKAEKSTWGGNGKVEKVEEGVSPRPRKLAKTEQGPVERKFGNGNAVKAESLISE 243
           TTKAIPVKAEKSTWGGNGKVEKVEEGVSPRPRKLAKTEQGPVERKFGNGNAVKAESLISE
Sbjct: 181 TTKAIPVKAEKSTWGGNGKVEKVEEGVSPRPRKLAKTEQGPVERKFGNGNAVKAESLISE 240

Query: 244 EPVKVERTANQVKPSSSANKPVANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHE 303
           EPVKVERTANQVKPSSSANKPVANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHE
Sbjct: 241 EPVKVERTANQVKPSSSANKPVANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHE 300

Query: 304 SIKGDVDACDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGD 363
           SIKGDVDACDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGD
Sbjct: 301 SIKGDVDACDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGD 360

Query: 364 IKPERIVNLTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYH 423
           IKPERIVNLTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYH
Sbjct: 361 IKPERIVNLTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYH 420

Query: 424 QLQTRSADEPMTTFVTCVNCNNHWKFC 451
           QLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 421 QLQTRSADEPMTTFVTCVNCNNHWKFC 447

[Close]

BLAST of Spo14348.1 vs. NCBI nr
Match: gi|731323512|ref|XP_010672470.1| (PREDICTED: transcription elongation factor A protein 3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 554.7 bits (1428), Expect = 1.500e-154
Identity = 290/379 (76.52%), Postives = 323/379 (85.22%), Query Frame = 1


		  
Query: 73  MESELVELFEAAKKAADAAAAEDVSSTNEESLCLEALKVLKDFPVNYQILVSTQVGKRLR 132
           MESELVELFEAAKKAADAAAAED  S  EES CLEALK LKDFPVNYQILVSTQVGKRLR
Sbjct: 1   MESELVELFEAAKKAADAAAAEDSGSVEEESRCLEALKELKDFPVNYQILVSTQVGKRLR 60

Query: 133 HLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNG-EVGNNSVKVVPINADSTTKAIPVK 192
           HLTKHPR+K+QS A +LIEIWKNII++ET+QKKNG  VGNNS K   +NADS+ KAI VK
Sbjct: 61  HLTKHPRKKVQSVAVELIEIWKNIIIEETSQKKNGTSVGNNSFKGEAVNADSSKKAIAVK 120

Query: 193 AEKSTWGGNGKVEKVEEGVSPRPRKLAKTEQGPVERKFGNGNAVKAESLISEEPVKVERT 252
            EK++ G N KV+     +SPRP+KLAKTE+GPVERKF NGNAVK ES  S + VKVERT
Sbjct: 121 VEKNSCGENVKVDH----LSPRPQKLAKTERGPVERKFENGNAVKIESGSSADSVKVERT 180

Query: 253 ANQVKPSSSANKPVANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHESIKGDVDA 312
             Q K +SSA KP ANAPPKL SM++ GD TRDK+RELL +ALSKV +EA E +K  V A
Sbjct: 181 VKQEKLASSAKKPAANAPPKLNSMIQCGDPTRDKMRELLSDALSKVSSEADEDMKDHVAA 240

Query: 313 CDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIKPERIVN 372
           CDP+RVAVSVESVMF+KWGRS GAHKFKYRSI+FN+KD  N DFRRKVLLGDIKPERI N
Sbjct: 241 CDPIRVAVSVESVMFEKWGRSNGAHKFKYRSIVFNLKDPNNLDFRRKVLLGDIKPERICN 300

Query: 373 LTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYHQLQTRSAD 432
           LT EEMASEQRR+EN++IE+KALF+C+R G PKATTDQFRCGRCGQRK TY+QLQTRSAD
Sbjct: 301 LTAEEMASEQRRLENKQIEQKALFDCQRGGPPKATTDQFRCGRCGQRKCTYYQLQTRSAD 360

Query: 433 EPMTTFVTCVNCNNHWKFC 451
           EPMTTFVTCVNCNNHWKFC
Sbjct: 361 EPMTTFVTCVNCNNHWKFC 375

[Close]

BLAST of Spo14348.1 vs. NCBI nr
Match: gi|225439709|ref|XP_002272768.1| (PREDICTED: transcription elongation factor A protein 1 [Vitis vinifera])

HSP 1 Score: 431.0 bits (1107), Expect = 2.500e-117
Identity = 233/384 (60.68%), Postives = 278/384 (72.40%), Query Frame = 1


		  
Query: 73  MESELVELFEAAKKAADAAAAEDVSSTNEE-SLCLEALKVLKDFPVNYQILVSTQVGKRL 132
           ME ELVELFE+AKKAADAAA + VSS   E   C++ALK LK FPV Y+ L STQVGKRL
Sbjct: 1   MERELVELFESAKKAADAAATDGVSSNGPEVGRCVDALKQLKSFPVTYEALASTQVGKRL 60

Query: 133 RHLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNSVKVVPINADSTTKAIPVK 192
           RHLTKHP+ KIQS A+DL+E+WK +++ ET  KKNG + NN      ++   T     VK
Sbjct: 61  RHLTKHPKGKIQSLASDLLEMWKKVVIDETRNKKNGGLDNNGSAKAEVSKTET-----VK 120

Query: 193 AEKSTWGGNGKVEKVEEGVSPRPRKLAKTEQGPVERKFGNGNAVKAESLISEEPVKVERT 252
            E +   G  KVEK            +K E   +E KF  G++ K  S+   E +KVE+ 
Sbjct: 121 VEMAHKAGGVKVEKA-----------SKVETVKIE-KFDRGSSTKPGSVSRSETIKVEKR 180

Query: 253 ANQV---KPSSSANKP--VANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHESIK 312
              V   K  SS  KP   +N PPKL +M+K  DA RDKVRELL EAL KV +EA E IK
Sbjct: 181 VENVDERKQFSSVKKPPQASNGPPKLTAMIKCNDALRDKVRELLAEALFKVASEADEDIK 240

Query: 313 GDVDACDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIKP 372
            +V+ACDP+RVAVSVESVMF+K GRS G  KFKYRSIMFNIKD  NPD RRKVLLG++KP
Sbjct: 241 DEVNACDPIRVAVSVESVMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKP 300

Query: 373 ERIVNLTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYHQLQ 432
           +R++N++PEEMAS QR+ EN +I++KALF+CER G PKATTDQF+CGRCGQRKTTY+QLQ
Sbjct: 301 DRLINMSPEEMASNQRQRENSQIKEKALFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQ 360

Query: 433 TRSADEPMTTFVTCVNCNNHWKFC 451
           TRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 361 TRSADEPMTTFVTCVNCNNHWKFC 367

[Close]

BLAST of Spo14348.1 vs. NCBI nr
Match: gi|449441244|ref|XP_004138392.1| (PREDICTED: transcription elongation factor S-II [Cucumis sativus])

HSP 1 Score: 420.6 bits (1080), Expect = 3.400e-114
Identity = 234/384 (60.94%), Postives = 281/384 (73.18%), Query Frame = 1


		  
Query: 73  MESELVELFEAAKKAADAAAAEDVSSTNEESLCLEALKVLKDFPVNYQILVSTQVGKRLR 132
           ME+ELVELFEAAKKAADAAAA       EES CL+AL+ LK FPV YQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 133 HLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNSVKVVPINADSTTKAIPVKA 192
           HLTKHP++KIQ  A+DLIE+WK I+++ET   KN + GN S K  P     + +++    
Sbjct: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKET--NKNKKNGNASSKDSPKIGSPSAESV---- 120

Query: 193 EKSTWGGNGKVEKVEEGVSPRPRKLAKTEQGPVERKFGNGNAVKAESLISEE-PVKVERT 252
                    KVEK ++  S +  +++K EQ        +    K+ES++SE   VKVE+T
Sbjct: 121 ---------KVEKFQKSSSMKVERVSKVEQFDRNGATSSVKYSKSESVVSERNSVKVEKT 180

Query: 253 ANQVKPS---SSANKPV--ANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHESIK 312
            + VK         KP   A APPKL SM+KS DA RDK+RELL EA SKV  EA E   
Sbjct: 181 DSMVKVERVVKEEKKPSSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFM 240

Query: 313 GDVDACDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIKP 372
            +V+A DP+RVAVSVESVMF+ WG STGA K KYRSIMFN+KD KNPDFRRKVLLG IKP
Sbjct: 241 DEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKP 300

Query: 373 ERIVNLTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYHQLQ 432
           ER++N++  +MAS+QR+ EN++I +KALF+CER GAPKATTDQF+CGRCGQRKTTY+QLQ
Sbjct: 301 ERMINMSTADMASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQ 360

Query: 433 TRSADEPMTTFVTCVNCNNHWKFC 451
           TRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 361 TRSADEPMTTFVTCVNCNNHWKFC 369

[Close]

BLAST of Spo14348.1 vs. NCBI nr
Match: gi|719987514|ref|XP_010252041.1| (PREDICTED: transcription elongation factor S-II-like isoform X2 [Nelumbo nucifera])

HSP 1 Score: 420.6 bits (1080), Expect = 3.400e-114
Identity = 220/387 (56.85%), Postives = 281/387 (72.61%), Query Frame = 1


		  
Query: 73  MESELVELFEAAKKAADAAAAEDVSSTNEESLCLEALKVLKDFPVNYQILVSTQVGKRLR 132
           M  EL+ELFEAAKKAADAAA E+  S  EES CL+ALK LK FPV  Q L+ TQ+GKR+R
Sbjct: 1   MARELLELFEAAKKAADAAAVEE--SPAEESRCLDALKRLKSFPVTKQDLIDTQIGKRVR 60

Query: 133 HLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNS-------VKVVPINADSTT 192
           +L KHPR KIQ+ A+DLIEIWK ++L+E+A+ K     +N         K+ P+ A+   
Sbjct: 61  NLKKHPREKIQALASDLIEIWKRVVLEESAKNKQNGASDNKESPKAEVAKLEPVKAEKVQ 120

Query: 193 KAIPVKAEKSTWGGNGKVEKVEEGVSPRPRKLAKTEQGPVERKFGNGNAVKAESLISEEP 252
               +K EK+      K E+ E   S R  K+++      E++     AVK E +   E 
Sbjct: 121 NPESIKVEKTE-----KAERGETLKSERMEKISRAGSFKTEKR----EAVKVEKIDGVEN 180

Query: 253 VKVERTANQVKPSSSANKPV--ANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHE 312
            K+E+ + + K +S   KP+  +N PPKL +M+KS DA RDK+R++L EA SKV  EA E
Sbjct: 181 AKIEKLSKEEKQASGIKKPLQASNGPPKLTTMIKSNDAMRDKIRDILAEAFSKVSTEADE 240

Query: 313 SIKGDVDACDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGD 372
            ++ +VDACDP+RVA+SVESV+F KWGRS GAHK KYRSIMFNI D KNPDFRR+VLLG 
Sbjct: 241 DVRDEVDACDPIRVAISVESVLFGKWGRSNGAHKVKYRSIMFNINDPKNPDFRRRVLLGQ 300

Query: 373 IKPERIVNLTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYH 432
           +KPE ++++TPEEMAS+QRR +N++I++KALFECER G PKATTDQF+CGRCGQRK TY+
Sbjct: 301 VKPESLLSMTPEEMASDQRRRQNEQIKEKALFECERGGPPKATTDQFKCGRCGQRKCTYY 360

Query: 433 QLQTRSADEPMTTFVTCVNCNNHWKFC 451
           Q+QTRSADEPMTTFVTCVNCN+HWKFC
Sbjct: 361 QMQTRSADEPMTTFVTCVNCNHHWKFC 376

[Close]

BLAST of Spo14348.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q981_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_211060 PE=4 SV=1)

HSP 1 Score: 867.5 bits (2240), Expect = 7.300e-249
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 1


		  
Query: 4   IAAQNSPSPSSSSSSTVCVSLSNFLISSIFSSCWVLRKNLRNFGEVVIKRRRNRITEGSG 63
           IAAQNSPSPSSSSSSTVCVSLSNFLISSIFSSCWVLRKNLRNFGEVVIKRRRNRITEGSG
Sbjct: 1   IAAQNSPSPSSSSSSTVCVSLSNFLISSIFSSCWVLRKNLRNFGEVVIKRRRNRITEGSG 60

Query: 64  SEWNTVIRRMESELVELFEAAKKAADAAAAEDVSSTNEESLCLEALKVLKDFPVNYQILV 123
           SEWNTVIRRMESELVELFEAAKKAADAAAAEDVSSTNEESLCLEALKVLKDFPVNYQILV
Sbjct: 61  SEWNTVIRRMESELVELFEAAKKAADAAAAEDVSSTNEESLCLEALKVLKDFPVNYQILV 120

Query: 124 STQVGKRLRHLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNSVKVVPINADS 183
           STQVGKRLRHLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNSVKVVPINADS
Sbjct: 121 STQVGKRLRHLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNSVKVVPINADS 180

Query: 184 TTKAIPVKAEKSTWGGNGKVEKVEEGVSPRPRKLAKTEQGPVERKFGNGNAVKAESLISE 243
           TTKAIPVKAEKSTWGGNGKVEKVEEGVSPRPRKLAKTEQGPVERKFGNGNAVKAESLISE
Sbjct: 181 TTKAIPVKAEKSTWGGNGKVEKVEEGVSPRPRKLAKTEQGPVERKFGNGNAVKAESLISE 240

Query: 244 EPVKVERTANQVKPSSSANKPVANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHE 303
           EPVKVERTANQVKPSSSANKPVANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHE
Sbjct: 241 EPVKVERTANQVKPSSSANKPVANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHE 300

Query: 304 SIKGDVDACDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGD 363
           SIKGDVDACDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGD
Sbjct: 301 SIKGDVDACDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGD 360

Query: 364 IKPERIVNLTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYH 423
           IKPERIVNLTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYH
Sbjct: 361 IKPERIVNLTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYH 420

Query: 424 QLQTRSADEPMTTFVTCVNCNNHWKFC 451
           QLQTRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 421 QLQTRSADEPMTTFVTCVNCNNHWKFC 447

[Close]

BLAST of Spo14348.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CU23_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g058910 PE=4 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 1.100e-154
Identity = 290/379 (76.52%), Postives = 323/379 (85.22%), Query Frame = 1


		  
Query: 73  MESELVELFEAAKKAADAAAAEDVSSTNEESLCLEALKVLKDFPVNYQILVSTQVGKRLR 132
           MESELVELFEAAKKAADAAAAED  S  EES CLEALK LKDFPVNYQILVSTQVGKRLR
Sbjct: 1   MESELVELFEAAKKAADAAAAEDSGSVEEESRCLEALKELKDFPVNYQILVSTQVGKRLR 60

Query: 133 HLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNG-EVGNNSVKVVPINADSTTKAIPVK 192
           HLTKHPR+K+QS A +LIEIWKNII++ET+QKKNG  VGNNS K   +NADS+ KAI VK
Sbjct: 61  HLTKHPRKKVQSVAVELIEIWKNIIIEETSQKKNGTSVGNNSFKGEAVNADSSKKAIAVK 120

Query: 193 AEKSTWGGNGKVEKVEEGVSPRPRKLAKTEQGPVERKFGNGNAVKAESLISEEPVKVERT 252
            EK++ G N KV+     +SPRP+KLAKTE+GPVERKF NGNAVK ES  S + VKVERT
Sbjct: 121 VEKNSCGENVKVDH----LSPRPQKLAKTERGPVERKFENGNAVKIESGSSADSVKVERT 180

Query: 253 ANQVKPSSSANKPVANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHESIKGDVDA 312
             Q K +SSA KP ANAPPKL SM++ GD TRDK+RELL +ALSKV +EA E +K  V A
Sbjct: 181 VKQEKLASSAKKPAANAPPKLNSMIQCGDPTRDKMRELLSDALSKVSSEADEDMKDHVAA 240

Query: 313 CDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIKPERIVN 372
           CDP+RVAVSVESVMF+KWGRS GAHKFKYRSI+FN+KD  N DFRRKVLLGDIKPERI N
Sbjct: 241 CDPIRVAVSVESVMFEKWGRSNGAHKFKYRSIVFNLKDPNNLDFRRKVLLGDIKPERICN 300

Query: 373 LTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYHQLQTRSAD 432
           LT EEMASEQRR+EN++IE+KALF+C+R G PKATTDQFRCGRCGQRK TY+QLQTRSAD
Sbjct: 301 LTAEEMASEQRRLENKQIEQKALFDCQRGGPPKATTDQFRCGRCGQRKCTYYQLQTRSAD 360

Query: 433 EPMTTFVTCVNCNNHWKFC 451
           EPMTTFVTCVNCNNHWKFC
Sbjct: 361 EPMTTFVTCVNCNNHWKFC 375

[Close]

BLAST of Spo14348.1 vs. UniProtKB/TrEMBL
Match: F6GXW2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0058g01410 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.800e-117
Identity = 233/384 (60.68%), Postives = 278/384 (72.40%), Query Frame = 1


		  
Query: 73  MESELVELFEAAKKAADAAAAEDVSSTNEE-SLCLEALKVLKDFPVNYQILVSTQVGKRL 132
           ME ELVELFE+AKKAADAAA + VSS   E   C++ALK LK FPV Y+ L STQVGKRL
Sbjct: 1   MERELVELFESAKKAADAAATDGVSSNGPEVGRCVDALKQLKSFPVTYEALASTQVGKRL 60

Query: 133 RHLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNSVKVVPINADSTTKAIPVK 192
           RHLTKHP+ KIQS A+DL+E+WK +++ ET  KKNG + NN      ++   T     VK
Sbjct: 61  RHLTKHPKGKIQSLASDLLEMWKKVVIDETRNKKNGGLDNNGSAKAEVSKTET-----VK 120

Query: 193 AEKSTWGGNGKVEKVEEGVSPRPRKLAKTEQGPVERKFGNGNAVKAESLISEEPVKVERT 252
            E +   G  KVEK            +K E   +E KF  G++ K  S+   E +KVE+ 
Sbjct: 121 VEMAHKAGGVKVEKA-----------SKVETVKIE-KFDRGSSTKPGSVSRSETIKVEKR 180

Query: 253 ANQV---KPSSSANKP--VANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHESIK 312
              V   K  SS  KP   +N PPKL +M+K  DA RDKVRELL EAL KV +EA E IK
Sbjct: 181 VENVDERKQFSSVKKPPQASNGPPKLTAMIKCNDALRDKVRELLAEALFKVASEADEDIK 240

Query: 313 GDVDACDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIKP 372
            +V+ACDP+RVAVSVESVMF+K GRS G  KFKYRSIMFNIKD  NPD RRKVLLG++KP
Sbjct: 241 DEVNACDPIRVAVSVESVMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKP 300

Query: 373 ERIVNLTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYHQLQ 432
           +R++N++PEEMAS QR+ EN +I++KALF+CER G PKATTDQF+CGRCGQRKTTY+QLQ
Sbjct: 301 DRLINMSPEEMASNQRQRENSQIKEKALFDCERGGPPKATTDQFKCGRCGQRKTTYYQLQ 360

Query: 433 TRSADEPMTTFVTCVNCNNHWKFC 451
           TRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 361 TRSADEPMTTFVTCVNCNNHWKFC 367

[Close]

BLAST of Spo14348.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KDH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014610 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 2.400e-114
Identity = 234/384 (60.94%), Postives = 281/384 (73.18%), Query Frame = 1


		  
Query: 73  MESELVELFEAAKKAADAAAAEDVSSTNEESLCLEALKVLKDFPVNYQILVSTQVGKRLR 132
           ME+ELVELFEAAKKAADAAAA       EES CL+AL+ LK FPV YQILVSTQVGKRLR
Sbjct: 1   MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR 60

Query: 133 HLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNSVKVVPINADSTTKAIPVKA 192
           HLTKHP++KIQ  A+DLIE+WK I+++ET   KN + GN S K  P     + +++    
Sbjct: 61  HLTKHPKKKIQEHASDLIEMWKEIVIKET--NKNKKNGNASSKDSPKIGSPSAESV---- 120

Query: 193 EKSTWGGNGKVEKVEEGVSPRPRKLAKTEQGPVERKFGNGNAVKAESLISEE-PVKVERT 252
                    KVEK ++  S +  +++K EQ        +    K+ES++SE   VKVE+T
Sbjct: 121 ---------KVEKFQKSSSMKVERVSKVEQFDRNGATSSVKYSKSESVVSERNSVKVEKT 180

Query: 253 ANQVKPS---SSANKPV--ANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHESIK 312
            + VK         KP   A APPKL SM+KS DA RDK+RELL EA SKV  EA E   
Sbjct: 181 DSMVKVERVVKEEKKPSSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEADEEFM 240

Query: 313 GDVDACDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIKP 372
            +V+A DP+RVAVSVESVMF+ WG STGA K KYRSIMFN+KD KNPDFRRKVLLG IKP
Sbjct: 241 DEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKP 300

Query: 373 ERIVNLTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYHQLQ 432
           ER++N++  +MAS+QR+ EN++I +KALF+CER GAPKATTDQF+CGRCGQRKTTY+QLQ
Sbjct: 301 ERMINMSTADMASDQRKRENEEIAQKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQLQ 360

Query: 433 TRSADEPMTTFVTCVNCNNHWKFC 451
           TRSADEPMTTFVTCVNCNNHWKFC
Sbjct: 361 TRSADEPMTTFVTCVNCNNHWKFC 369

[Close]

BLAST of Spo14348.1 vs. UniProtKB/TrEMBL
Match: A0A061EQ24_THECC (Transcript elongation factor IIS, putative OS=Theobroma cacao GN=TCM_019685 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 2.200e-112
Identity = 229/382 (59.95%), Postives = 277/382 (72.51%), Query Frame = 1


		  
Query: 73  MESELVELFEAAKKAADAAAAEDVSSTNEE-SLCLEALKVLKDFPVNYQILVSTQVGKRL 132
           ME ELV+LFEAAKKAAD A+ + VSS   E S C++ALK LK FPV Y ILVSTQVGK+L
Sbjct: 1   MERELVDLFEAAKKAADLASTDAVSSNGPEVSRCVDALKQLKAFPVTYDILVSTQVGKKL 60

Query: 133 RHLTKHPRRKIQSFAADLIEIWKNIILQETAQ-KKNGEVGNNSVKVVPINADSTTKAIPV 192
           R LTKHPR  I + A+DL+E+WK I+++ET + KKNG    ++VKV  I   S      V
Sbjct: 61  RPLTKHPRENIHTVASDLLELWKKIVIEETTKSKKNGTT--STVKVEKIQKPSA-----V 120

Query: 193 KAEKSTWGGNGKVEKVEEGVSPRPRKLAKTEQGPVERKFGNGNAVKAESLISEEPVKVER 252
            AEK +     K+EKV +  S +P K+ K E         NG+ V +E     E VKVE+
Sbjct: 121 TAEKISNTETVKIEKVSKSDSTKPIKVEKNE--------ANGDTVMSEKTDRRETVKVEK 180

Query: 253 TANQVKPSSSANKPVAN--APPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHESIKGD 312
           T    + +S   KP      PPKL SM+K  D  RDK RE+L+EALSKV +EA E I   
Sbjct: 181 TYRDERQASDVKKPSQPPAGPPKLTSMVKCNDPLRDKFREILVEALSKVPSEADEDILDQ 240

Query: 313 VDACDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIKPER 372
           V+ACDP+RVAVSVESVMF+K GRS G  KFKYRSIMFN+KD  NPD RRKVLLG++KPER
Sbjct: 241 VNACDPIRVAVSVESVMFEKMGRSNGTQKFKYRSIMFNMKDPNNPDLRRKVLLGEVKPER 300

Query: 373 IVNLTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYHQLQTR 432
           ++ +TPEEMASEQR+ EN +I++KALF+CER GAPKATTDQF+CGRCGQRKTTY+Q+QTR
Sbjct: 301 LITMTPEEMASEQRQRENNEIKEKALFDCERGGAPKATTDQFKCGRCGQRKTTYYQMQTR 360

Query: 433 SADEPMTTFVTCVNCNNHWKFC 451
           SADEPMTT+VTCVNCNN WKFC
Sbjct: 361 SADEPMTTYVTCVNCNNRWKFC 367

[Close]

BLAST of Spo14348.1 vs. ExPASy Swiss-Prot
Match: RDO2_ARATH (Transcription elongation factor TFIIS OS=Arabidopsis thaliana GN=TFIIS PE=1 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 3.300e-101
Identity = 204/384 (53.12%), Postives = 267/384 (69.53%), Query Frame = 1


		  
Query: 73  MESELVELFEAAKKAADAAAAEDVSSTNEE-SLCLEALKVLKDFPVNYQILVSTQVGKRL 132
           MES+L++LFE AKKAADAAA + V+S+  E S C++ALK LK FPV Y  LV+TQVGK+L
Sbjct: 1   MESDLIDLFEGAKKAADAAALDGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKKL 60

Query: 133 RHLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNSVKVVPIN---ADSTTKAI 192
           R L KHP   I+S A DL+EIWK ++++ETA+ K  E G N  K   +N    +  +   
Sbjct: 61  RSLAKHPVEDIKSVATDLLEIWKKVVIEETAKAKKTE-GTNGCKEAKVNKMDVEKPSNPA 120

Query: 193 PVKAEKSTWGGNGKVEKVEEGVSPRPRKLA--KTEQGPVERKFGNGNAVKAESLISEEPV 252
           PVK +K   G + K  KVE    P  + +   K E+   + K  NG  +        + V
Sbjct: 121 PVKVQKLQRGDSAKSIKVERK-EPDNKVVTGVKIERKVPDIKVTNGTKIDYRG----QAV 180

Query: 253 KVERTANQVKPSSSANKPVANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHESIK 312
           K E+ +   + S  A    ANAPPKL +MLK  D  RDK+RELL+EAL +V  EA +  +
Sbjct: 181 KDEKVSKDNQSSMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLVEALCRVAGEADDYER 240

Query: 313 GDVDACDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIKP 372
             V+A DP+RVAVSVES+MF+K GRSTGA K KYRSIMFN++D  NPD RR+VL G+I P
Sbjct: 241 ESVNASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISP 300

Query: 373 ERIVNLTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYHQLQ 432
           E+++ L+ E+MAS++R+ EN +I++KALF+CER  A KA+TDQF+CGRCGQRK TY+Q+Q
Sbjct: 301 EKLITLSAEDMASDKRKQENNQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQ 360

Query: 433 TRSADEPMTTFVTCVNCNNHWKFC 451
           TRSADEPMTT+VTCVNC+NHWKFC
Sbjct: 361 TRSADEPMTTYVTCVNCDNHWKFC 378

[Close]

BLAST of Spo14348.1 vs. ExPASy Swiss-Prot
Match: TCEA3_MOUSE (Transcription elongation factor A protein 3 OS=Mus musculus GN=Tcea3 PE=1 SV=3)

HSP 1 Score: 142.5 bits (358), Expect = 1.100e-32
Identity = 118/377 (31.30%), Postives = 177/377 (46.95%), Query Frame = 1


		  
Query: 79  ELFEAAKKAADAAAAEDVSSTNEESLCLEALKVLKDFPVNYQILVSTQVGKRLRHLTKH- 138
           EL   AKK       E + S  +    L+ LK L    ++ Q+L +T++G  +  + KH 
Sbjct: 6   ELLRIAKKL------EKMVSRKKTEGALDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHC 65

Query: 139 PRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNSVKVVPINADSTTKAIPVKAEKSTW 198
             +++ S A  LI+ WK ++      K   E    + K   +               S W
Sbjct: 66  SDKEVVSLAKVLIKNWKRLLDSPRTTKGEREEREKAKKEKGLGC-------------SDW 125

Query: 199 GGNGKVEKVEEGVSPRPRKLA----KTEQGPVERKFGNGNAVKAESLISEEPVKVERTAN 258
                  K E G+SP PRK      KT +  V+ +    ++ K  SL      K  +   
Sbjct: 126 -------KPEAGLSP-PRKKGGGEPKTRRDSVDSRSSTTSSPKRPSLERSNSSK-SKVET 185

Query: 259 QVKPSSSANKPVANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHESIKGDVDACD 318
              PSS +    A A   L     +GD+ RDK  E+L  AL     +A ++ K     CD
Sbjct: 186 PTTPSSPSTPTFAPAVCLLAPCYLTGDSVRDKCVEMLSAAL-----KAEDNFKDYGVNCD 245

Query: 319 PVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIKPERIVNLT 378
             ++A  +E  ++ +   +   ++ + RS + N+KD +NP  RR VL G I PE I  +T
Sbjct: 246 --KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMT 305

Query: 379 PEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYHQLQTRSADEP 438
            EEMAS++ R     + ++A+ E +       TTD  RC +C ++  TY+Q+QTRSADEP
Sbjct: 306 AEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLLRCSKCKKKNCTYNQVQTRSADEP 347

Query: 439 MTTFVTCVNCNNHWKFC 451
           MTTFV C  C N WKFC
Sbjct: 366 MTTFVLCNECGNRWKFC 347

[Close]

BLAST of Spo14348.1 vs. ExPASy Swiss-Prot
Match: TCEA3_HUMAN (Transcription elongation factor A protein 3 OS=Homo sapiens GN=TCEA3 PE=1 SV=2)

HSP 1 Score: 137.5 bits (345), Expect = 3.600e-31
Identity = 116/375 (30.93%), Postives = 180/375 (48.00%), Query Frame = 1


		  
Query: 79  ELFEAAKKAADAAAAEDVSSTNEESLCLEALKVLKDFPVNYQILVSTQVGKRLRHLTKH- 138
           EL   AKK     A ++          L+ LK L    ++ Q+L +T++G  +  + KH 
Sbjct: 6   ELLRIAKKLEKMVARKNTEGA------LDLLKKLHSCQMSIQLLQTTRIGVAVNGVRKHC 65

Query: 139 PRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNSVKVVPINADSTTKAIPVKAEKSTW 198
             +++ S A  LI+ WK ++  ++     GE G    K     A    K +    E S W
Sbjct: 66  SDKEVVSLAKVLIKNWKRLL--DSPGPPKGEKGEEREK-----AKKKEKGL----ECSDW 125

Query: 199 GGNGKVEKVEEGVSP--RPRKLAKTEQGPVERKFGNGNAVKAESLISEEPVKVERTANQV 258
                  K E G+SP  + R+  KT +  V+ K    ++ K  S+      K  +  +  
Sbjct: 126 -------KPEAGLSPPRKKREDPKTRRDSVDSKSSASSSPKRPSVERSNSSK-SKAESPK 185

Query: 259 KPSSSANKPVANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHESIKGDVDACDPV 318
            PSS      A++   L     +GD+ RDK  E+L  AL     +A +  K     CD  
Sbjct: 186 TPSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEMLSAAL-----KADDDYKDYGVNCD-- 245

Query: 319 RVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIKPERIVNLTPE 378
           ++A  +E  ++ +   +   ++ + RS + N+KD +NP  RR VL G I    I  +T E
Sbjct: 246 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 305

Query: 379 EMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYHQLQTRSADEPMT 438
           EMAS++ R     + ++A+ E +       TTD F+C +C ++  TY+Q+QTRSADEPMT
Sbjct: 306 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQVQTRSADEPMT 348

Query: 439 TFVTCVNCNNHWKFC 451
           TFV C  C N WKFC
Sbjct: 366 TFVLCNECGNRWKFC 348

[Close]

BLAST of Spo14348.1 vs. ExPASy Swiss-Prot
Match: TCEA3_BOVIN (Transcription elongation factor A protein 3 OS=Bos taurus GN=TCEA3 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 6.800e-30
Identity = 118/385 (30.65%), Postives = 183/385 (47.53%), Query Frame = 1


		  
Query: 79  ELFEAAKKAADAAAAEDVSSTNEESLCLEALKVLKDFPVNYQILVSTQVGKRLRHLTKH- 138
           EL   AKK     A +           L+ LK L  + ++ Q+L +T++G  +  + KH 
Sbjct: 6   ELLRIAKKLEKMVARKKTEGA------LDLLKKLGSWQMSIQLLQTTRIGVAVNGVRKHC 65

Query: 139 PRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNSVKVVPINADSTTKAIPVKAEKSTW 198
             +++ + A  LI  WK ++      K  GE G   VK                A+K   
Sbjct: 66  SNKEVVALAKVLIRNWKQLLDSPATPK--GEKGEERVK----------------AKKKEK 125

Query: 199 GGNGKVEKVEEGVSPRPRKLAKTEQGPVERKFGNGNAVKAESLISEEPVK--VERTANQV 258
           G +    K E  +SP PRK  K  + P +R+    ++V ++S  +  P +  +ER+ +  
Sbjct: 126 GLDCSDWKPETSLSP-PRK--KRVEEPKDRR----DSVDSKSSATSSPKRPSMERSNSS- 185

Query: 259 KPSSSANKPVANAPPKLPSMLKS----------GDATRDKVRELLLEALSKVCNEAHESI 318
              S A  P   + P  P+   S          GD+ RDK  E+L  AL     +A +  
Sbjct: 186 --KSKAETPRTPSSPSSPTFAPSVCLLAPCYLTGDSVRDKCVEMLSAAL-----KADDDY 245

Query: 319 KGDVDACDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIK 378
           K     CD  ++A  +E  ++ +   +   ++ + RS + N+KD +NP  RR VL G I 
Sbjct: 246 KDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAIS 305

Query: 379 PERIVNLTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYHQL 438
              I  +T EEMAS++ R     + ++A+ E +       TTD F+C +C ++  TY+Q+
Sbjct: 306 AGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCSKCKKKNCTYNQV 349

Query: 439 QTRSADEPMTTFVTCVNCNNHWKFC 451
           QTRSADEPMTTFV C  C N WKFC
Sbjct: 366 QTRSADEPMTTFVLCNECGNRWKFC 349

[Close]

BLAST of Spo14348.1 vs. ExPASy Swiss-Prot
Match: TCEA2_HUMAN (Transcription elongation factor A protein 2 OS=Homo sapiens GN=TCEA2 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 9.800e-29
Identity = 75/190 (39.47%), Postives = 110/190 (57.89%), Query Frame = 1


		  
Query: 264 PVANAPPKL---PSMLKSGDATRDKVRELLLEALSKVCNEAHESIKGDVDACDPVRVAVS 323
           P A + P++   P +  + DA R+K RE+L  AL    +  H +I  D +     R++  
Sbjct: 117 PRAPSTPRITTFPPVPVTCDAVRNKCREMLTAALQT--DHDHVAIGADCE-----RLSAQ 176

Query: 324 VESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIKPERIVNLTPEEMASE 383
           +E  +F   G +   +K + RS + N+KD KNPD RR VL G I P++I  +T EEMAS+
Sbjct: 177 IEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASD 236

Query: 384 QRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYHQLQTRSADEPMTTFVTC 443
           + +   + + K+A+ E +        TD F CG+C ++  TY Q+QTRS+DEPMTTFV C
Sbjct: 237 ELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVC 296

Query: 444 VNCNNHWKFC 451
             C N WKFC
Sbjct: 297 NECGNRWKFC 299

[Close]

BLAST of Spo14348.1 vs. TAIR (Arabidopsis)
Match: AT2G38560.1 (transcript elongation factor IIS)

HSP 1 Score: 370.2 bits (949), Expect = 1.900e-102
Identity = 204/384 (53.12%), Postives = 267/384 (69.53%), Query Frame = 1


		  
Query: 73  MESELVELFEAAKKAADAAAAEDVSSTNEE-SLCLEALKVLKDFPVNYQILVSTQVGKRL 132
           MES+L++LFE AKKAADAAA + V+S+  E S C++ALK LK FPV Y  LV+TQVGK+L
Sbjct: 1   MESDLIDLFEGAKKAADAAALDGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKKL 60

Query: 133 RHLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNGEVGNNSVKVVPIN---ADSTTKAI 192
           R L KHP   I+S A DL+EIWK ++++ETA+ K  E G N  K   +N    +  +   
Sbjct: 61  RSLAKHPVEDIKSVATDLLEIWKKVVIEETAKAKKTE-GTNGCKEAKVNKMDVEKPSNPA 120

Query: 193 PVKAEKSTWGGNGKVEKVEEGVSPRPRKLA--KTEQGPVERKFGNGNAVKAESLISEEPV 252
           PVK +K   G + K  KVE    P  + +   K E+   + K  NG  +        + V
Sbjct: 121 PVKVQKLQRGDSAKSIKVERK-EPDNKVVTGVKIERKVPDIKVTNGTKIDYRG----QAV 180

Query: 253 KVERTANQVKPSSSANKPVANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHESIK 312
           K E+ +   + S  A    ANAPPKL +MLK  D  RDK+RELL+EAL +V  EA +  +
Sbjct: 181 KDEKVSKDNQSSMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLVEALCRVAGEADDYER 240

Query: 313 GDVDACDPVRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIKP 372
             V+A DP+RVAVSVES+MF+K GRSTGA K KYRSIMFN++D  NPD RR+VL G+I P
Sbjct: 241 ESVNASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISP 300

Query: 373 ERIVNLTPEEMASEQRRIENQKIEKKALFECERMGAPKATTDQFRCGRCGQRKTTYHQLQ 432
           E+++ L+ E+MAS++R+ EN +I++KALF+CER  A KA+TDQF+CGRCGQRK TY+Q+Q
Sbjct: 301 EKLITLSAEDMASDKRKQENNQIKEKALFDCERGLAAKASTDQFKCGRCGQRKCTYYQMQ 360

Query: 433 TRSADEPMTTFVTCVNCNNHWKFC 451
           TRSADEPMTT+VTCVNC+NHWKFC
Sbjct: 361 TRSADEPMTTYVTCVNCDNHWKFC 378

[Close]

BLAST of Spo14348.1 vs. TAIR (Arabidopsis)
Match: AT2G42730.1 (F-box family protein)

HSP 1 Score: 119.0 bits (297), Expect = 7.500e-27
Identity = 67/130 (51.54%), Postives = 90/130 (69.23%), Query Frame = 1


		  
Query: 270 PKLPSMLKSGDATRDKVRELLLEALSKVCNEAHES-IKGDVDACDPVRVAVSVESVMFDK 329
           P   +M K+GD+ RDKVRE+L  +L KV +E  ++ +K  V ACDP  VAVSVES MF+K
Sbjct: 594 PTHSTMKKTGDSKRDKVREILQTSLVKVASEIVDTEMKTRVTACDPSVVAVSVESAMFEK 653

Query: 330 WGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIKPERIVNLTPEEMASEQRRIENQK 389
            G   G HK KYRSI+FN+ D  NPD RRKVL+G+I  ER+V +  +EM SE+ + E Q+
Sbjct: 654 LGCFMGPHKAKYRSILFNMGDSNNPDLRRKVLIGEINGERLVTMERQEMGSEKIQKEVQR 713

Query: 390 IEKKALFECE 399
           I++ A F+ E
Sbjct: 714 IKENARFKEE 723

[Close]

BLAST of Spo14348.1 vs. TAIR (Arabidopsis)
Match: AT4G18720.1 (Transcription factor IIS protein)

HSP 1 Score: 108.2 bits (269), Expect = 1.300e-23
Identity = 62/125 (49.60%), Postives = 81/125 (64.80%), Query Frame = 1


		  
Query: 256 KPSSSANKPVANAPPKLPSMLKSGDATRDKVRELLLEALSKVCNEAHES-IKGDVDACDP 315
           +  S  N+  A   P   +M K+GD+ RDKVRE+L  +L+KV +E  ++ +K  V ACDP
Sbjct: 91  REKSRDNREAAVKIPTHATMKKTGDSKRDKVREILQTSLAKVASEVVDTEMKTRVTACDP 150

Query: 316 VRVAVSVESVMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIKPERIVNLTP 375
             VAVSVE+ MF+  G   G  K KYRSI+FN+ D  NPD RRKVLLG+I  ER+V +  
Sbjct: 151 WVVAVSVETAMFENLGCFMGPQKAKYRSILFNMGDSNNPDLRRKVLLGEISGERLVKMEK 210

Query: 376 EEMAS 380
           EEM S
Sbjct: 211 EEMGS 215

[Close]

BLAST of Spo14348.1 vs. TAIR (Arabidopsis)
Match: AT5G42325.1 (Transcription factor IIS protein)

HSP 1 Score: 87.8 bits (216), Expect = 1.800e-17
Identity = 61/146 (41.78%), Postives = 85/146 (58.22%), Query Frame = 1


		  
Query: 269 PPKLPS---MLKSGDATRDKVRELLLEALSKVCNEA--HESIKGDVDACDPVRVAVSVES 328
           P K+P+   M K+GD+ RDKV E+L  +L+KV  E    E  +  +  CDP  VAVSVES
Sbjct: 100 PVKIPTHSTMKKTGDSKRDKVHEILQSSLAKVATEVVDTEMKRRVMTVCDPWVVAVSVES 159

Query: 329 VMFDKWGRSTGAHKFKYRSIMFNIKDDKNPDFRRKVLLGDIKPERIVNLTPEEMASEQRR 388
            M                SI+FN+ D  NPD RRKVL+G+I  ER+V +  +EM SE+ +
Sbjct: 160 AM----------------SILFNMGDSNNPDLRRKVLIGEISGERLVKMEKDEMGSEKIQ 219

Query: 389 IENQKIEKKALFECE-RMGAPKATTD 409
            E Q+I+++A F+ E RM    A+ D
Sbjct: 220 KEVQRIKERARFKEESRMKMLLASAD 229

[Close]

BLAST of Spo14348.1 vs. TAIR (Arabidopsis)
Match: AT2G33090.1 (Transcription elongation factor (TFIIS) family protein)

HSP 1 Score: 65.9 bits (159), Expect = 7.500e-11
Identity = 35/103 (33.98%), Postives = 66/103 (64.08%), Query Frame = 1


		  
Query: 69  VIRRMESELVELFEAAKKAADAAAAEDV-SSTNEESLCLEALKVLKDFPVNYQILVSTQV 128
           V+ + +++ +ELFE AKK+AD A A+ + +S  E S+C++ L +L +FP++ + + + ++
Sbjct: 146 VLTKNDTDTLELFEIAKKSADFANAKGILASEVETSMCVDTLTLLLEFPISARDMETRKL 205

Query: 129 GKRLRHLTKHPRRKIQSFAADLIEIWKNIILQETAQKKNGEVG 171
             RL HLTKH  RKI + A+ L++ W+  I ++  ++     G
Sbjct: 206 MVRLEHLTKHKNRKICNSASKLLQCWRESIREQQLRESRKTQG 248

The following BLAST results are available for this feature:

BLAST of Spo14348.1 vs. NCBI nr
BLAST of Spo14348.1 vs. UniProtKB/TrEMBL
BLAST of Spo14348.1 vs. ExPASy Swiss-Prot
BLAST of Spo14348.1 vs. TAIR (Arabidopsis)

BLAST of Spo14348.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902087057\|gb\|KNA03243.1\|	1.1e-248	100.	hypothetical protein SOVF_2110...	[more]
gi\|731323512\|ref\|XP_010672470.1\|	1.5e-154	76.5	PREDICTED: transcription elong...	[more]
gi\|225439709\|ref\|XP_002272768.1\|	2.5e-117	60.6	PREDICTED: transcription elong...	[more]
gi\|449441244\|ref\|XP_004138392.1\|	3.4e-114	60.9	PREDICTED: transcription elong...	[more]
gi\|719987514\|ref\|XP_010252041.1\|	3.4e-114	56.8	PREDICTED: transcription elong...	[more]

BLAST of Spo14348.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9Q981_SPIOL	7.3e-249	100.	Uncharacterized protein (Fragm...	[more]
A0A0J8CU23_BETVU	1.1e-154	76.5	Uncharacterized protein OS=Bet...	[more]
F6GXW2_VITVI	1.8e-117	60.6	Putative uncharacterized prote...	[more]
A0A0A0KDH9_CUCSA	2.4e-114	60.9	Uncharacterized protein OS=Cuc...	[more]
A0A061EQ24_THECC	2.2e-112	59.9	Transcript elongation factor I...	[more]

BLAST of Spo14348.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RDO2_ARATH	3.3e-101	53.1	Transcription elongation facto...	[more]
TCEA3_MOUSE	1.1e-32	31.3	Transcription elongation facto...	[more]
TCEA3_HUMAN	3.6e-31	30.9	Transcription elongation facto...	[more]
TCEA3_BOVIN	6.8e-30	30.6	Transcription elongation facto...	[more]
TCEA2_HUMAN	9.8e-29	39.4	Transcription elongation facto...	[more]

BLAST of Spo14348.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G38560.1	1.9e-102	53.1	transcript elongation factor I...	[more]
AT2G42730.1	7.5e-27	51.5	F-box family protein	[more]
AT4G18720.1	1.3e-23	49.6	Transcription factor IIS prote...	[more]
AT5G42325.1	1.8e-17	41.7	Transcription factor IIS prote...	[more]
AT2G33090.1	7.5e-11	33.9	Transcription elongation facto...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001222	Zinc finger, TFIIS-type	PFAM	PF01096	TFIIS_C	coord: 410..448 score: 1.7
IPR001222	Zinc finger, TFIIS-type	SMART	SM00440	Cys4_2	coord: 410..449 score: 1.7
IPR001222	Zinc finger, TFIIS-type	PROSITE	PS00466	ZF_TFIIS_1	coord: 412..447 scor
IPR001222	Zinc finger, TFIIS-type	PROFILE	PS51133	ZF_TFIIS_2	coord: 408..448 score: 14
IPR003617	Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type	SMART	SM00509	TFS2_5	coord: 80..159 score: 5.8
IPR003618	Transcription elongation factor S-II, central domain	GENE3D	1.10.472.30		coord: 266..380 score: 5.0
IPR003618	Transcription elongation factor S-II, central domain	PFAM	PF07500	TFIIS_M	coord: 280..397 score: 8.2
IPR003618	Transcription elongation factor S-II, central domain	SMART	SM00510	mid_6	coord: 280..388 score: 9.0
IPR003618	Transcription elongation factor S-II, central domain	PROFILE	PS51321	TFIIS_CENTRAL	coord: 282..405 score: 33
IPR003618	Transcription elongation factor S-II, central domain	unknown	SSF46942	Elongation factor TFIIS domain 2	coord: 264..380 score: 5.23
IPR006289	Transcription elongation factor, TFIIS	TIGRFAMs	TIGR01385	TIGR01385	coord: 84..450 score: 3.0
IPR016492	Transcription elongation factor, TFIIS-related	PIR	PIRSF006704	TFIIS	coord: 74..450 score: 2.2
IPR017923	Transcription factor IIS, N-terminal	GENE3D	1.20.930.10		coord: 94..168 score: 4.2
IPR017923	Transcription factor IIS, N-terminal	PFAM	PF08711	Med26	coord: 108..157 score: 6.
IPR017923	Transcription factor IIS, N-terminal	PROFILE	PS51319	TFIIS_N	coord: 82..160 score: 19
IPR017923	Transcription factor IIS, N-terminal	unknown	SSF47676	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	coord: 95..167 score: 3.27
None	No IPR available	unknown	Coil	Coil	coord: 70..90 scor
None	No IPR available	GENE3D	2.20.25.10		coord: 386..450 score: 1.4
None	No IPR available	PANTHER	PTHR11477	TRANSCRIPTION ELONGATION FACTOR S-II	coord: 105..171 score: 1.5E-117coord: 232..450 score: 1.5E
None	No IPR available	unknown	SSF57783	Zinc beta-ribbon	coord: 388..448 score: 5.78

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032784	regulation of DNA-templated transcription, elongation
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding