Spo14397.1 (mRNA) | SpinachBase

Overview


Name	Spo14397.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	3'-5' exonuclease domain-containing family protein
Location	chr1 : 35777518 .. 35792099 (+)
Sequence length	1683

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAACCCAAAGAAGAAAAAGAAAAAAAAATACAAAAGTGGGATTTGAGCCAAAAATCCGATCAGTCTTGTAATGGTCTGATCAGATGGCGGACGATCCTTCTTCGCACCATGCCCATGTCCCATTGCCTTCGAACTTAGGTACCATTTTTATTTAATTAATCTTCTGTTAAATTAATTTTATGAATTATTTGCAGCTTTTTTTTTAGATTTGTTGATTATTTTTCGGCTTCAAGGTTTAGCAATAATTATACAGATTAAGTTTTTAATCCTAAAACTTAAGTGGGTTTTTGATAAACTTCATTTTTGATTAGAACTTGTTGATTTTTGAAGTGGGTTTGTGTTTTTTTGTCAGTCTTTTGATGTCATTTTTGCTCATATATAATCTATTAGAACTGTTTTATCTGTTGTATTATGTCTGTTTTGTTTTTGGTGTATGATTGAATGTGTCTGTAAAGGGATGACGAGAAAAAGATTGGTAAATTGGGGAGCATAATGCATATACCTGCAAGCCTGCAAGTTAACTTTCTGATGATTTTATCGGGGACTTTGTGCTATTATAGTATTTGGATGATTGTTTAATCAAATTTCTTTGAGTAGATAAAGTTTGAGTTCTGCCTCTATTGAACATGAAATGGTAAATTTTATAGTTAATGAGTTAGAAATAAGTGGCGTTGCTTAAATCTCTCGCGATGAGGAACACATGCTTAGAGTTTATGTTGCTGTTGTTAGGTTTATATATGGAGTTCATGGTTTCTCAGCTAGACTGGGTTGATTGAAATTTCAAAGGATGAACTATGAACTGCCCAGTATTTGTGATCGGGTAGTCTATTTTTCCCTAGTTCGGGAGAAAGGTTTTGTATCGTTTATCTTGAATTGGTTCTCTGTTTGATTGTGGGAGAAGTCGGGGTAACATTGTGGTTGATGATTGGGATATGGTCCACGGTTAACAACGATTTATGAGGTTAATTAGATTCATAGTAGGCTAGTAGTTAGGGCACCTCACTCATTGATTGTTGATATGGTACCTTTTTTTTTGTGTAGTCCTTTTGAAGGGTGTTTAACAGGAATTATTATTTTCTTTACCATCTTTATGTACCCATGAGTTTAGTCATGATAAACAAGAGGTAAAGATCAAAATCACCCATATGTATATTTTGTTGGCTGACACGAGAAATTATAAATTGTGTAGGTGGGTTAGTTTCAGATGATGCTCCACTGGTTCCGATTCATATTGTCACCGAAGCTTCCCAGCTTCCTGTGGAGTTCTTAGAACCCTGTCCTGAAACAAAGCTGGTTATTGGCTTTGATTGTGAAGGTGTTGACCTGTGTCGTTATGGAACTCTTTGTATAATGCAGGTTAGTGATTTTTCCTGGTAATTTTGAAGTACTTTTATCTACCAGATGTATATGAGCCATTAGTGAAAACTTGTCTTTGCCTATTTACCTTTTTTTTTGATTTGGAGATTTGGGGGTGAAGGTGGTTTGGTTTTTGTGTGTTTGATTGCTTGATCTACTTTTGTTGCACTTGCAAGTCACAACTTGATATGATCTTGTTGTACCTGTACAATTATGCATTGAGGTGACTTCTCTTTTCTACTTTGCGTGGGGCTTGTAGCTTGATATCACTATGGACCAGTTGTAGAGTGTTGTGTGACTTTTGTAAATTGTATGGTTTAGATGGTGTTCCATAATTTGAACTGAGCAAGGTGGCTTACTTTCTCTATTGCAGCTTGCATTTCCTGATGCTATATATCTTGTGGATGCCATAGAAGGTGGAGACATGCTCATAGAAGCGTGTAAGCCTGCTCTTGAATCTAGATACATCACTAAAGTTATACATGACTGCAAACGTGATAGTGAGGTCTCTAATTGGTCTATCAGCCGTTTATAATTTATTTCTAGTTTGCTTTGTACTAAACTTATATGTTGACTCACTATTTTCTAGGCACTGTATTTCCAGTTTGGCATCAAGTTACAAAATGTCATGGATACCCAGGTGAGCATTTTGGTGTATTTCTGATCAGTTAATGTAGCTGAATTTTTGTACTTAGTGTTGCTATATTGCTTTTAGGTAGATTTTTTTATTTTCATTTGCACTTGAAGTTGATTCAAATTTACAAAGTACATCATATTTTGCTTTCTTCCTTGCTTTTCTCCTTAAGTGTAAATTACCCTATTTGTCTGATTCTCAGCACCATCATGCAAATAACTCTTACCCGGTCTCCTGATTGGGTTTAATTAGCCTTTTTCTCTAACGTGGGTGACTTGTACAGAATGCAACTATTAATAAAGACAGAGCAAATTGGTAGTTATAATTTCAGAACAGCCTGAGCTTTCTTGCATGCTAGATTAGTAATGAAGAACCCATTTGATTGACCCCAAACAGTGAGAATAATCTTCCCTGCAATCTGCATTGGTTTCTGAGAAATGTAAACTACGAAGAATATGTTTATGCTTTTCATTCATACCCGCTTGCTAAGGACATTTTACTGGATGAATTGATGTTATTCACTGCATTGCTTCAAATATTTTCCATCATGGATGTAGCAATTTTTAAATTCTCCATAGATTCAAATGGTCTATGTATATTTTACAGATAGCGTATTCCTTGATCGAAGAACAGGAAGGACGACCAAGAGTGCCTGATGACTACATCTCATTTGTTGCTCTTCTTGCAGATCCACGCTATTGTGGTATTACACTTGTCACGGTATTTATTTATTGTGCCTAACTTTTAAAATGTTTATACACAGAAATGATAGTTTCAAGGAATTATAACATTAAGGGATGTTTATACACAAAAGTGATAGTTTCAAACATTAAGGAATGCAGTGTTGATCACAATATTCAGGAAGGAGTACAGCTTCTAGGCTAGTTTACTAGGGCTTGCTGCTGTACTCTTATATTAAAACAAAACATGCTTGTAATACTGACAAAAGTGTTTTTAAACTCTATCCAGATTTTTTGTTGTTGTATCATATCCTTGCCTCATAGGACTAGTGGTTCTAGGAAAGTTCTTCTTAGTTATAGCTTCAATAAGGCTAGAATTATTGGCTCTCCTTTACGGGCTTTACCTGTGTTACGATCTTAATTTTTAATTAAATTCTACATGGTGGCCTTGTGGTATCATTTATTCCACATGGTGGAAACAAAATATTTTGAGTTTCTAAGGTGATCTTATGGTATTGCATATATCATTAAGGTGCACTAATTGAAGAATTATAGCTAATACACCATTAATAAATTGATTTAACTTCTAGTTAATACTTCCTGGTTCCTCATTATCTATCTCCTCCAAAAAAAACTAACCTCACAGAGTCACAGATCCTTCAACAACATTGGAGTCCACAAAACAACCACCAAAGATCGTGACAGAGAGAGAAAGGAAGCCGTTCATCATCGTCAAATCGGGTCTCCTATTCCTGGCCGACGGAACTAATTAACAAACCCAACCCCGTTTCATTTTATTCTCTCTCCTAAACTATTCGCTCACTTAACATAATGCAAGTTGTTCACATTGGATCATCCTTCCTTCCATTAGAAGACAAATATTCACCTCTCTGATCTCGAGAGACTGCTAAAAAAGGAAGCAGCACCATTTCCTAATTATTTTTGAACATTTTTTTGAATATATTATTGTCGCTGAATCTGAAGATCAAGAAATGAAGAACAAGAAATCTGAAGATAATGATTCACCTCACAACCTTGAGAGGCTGCTACAAATGCAATTTAACAGAGCATTTGGCCAATAACTGATAAAGAATCAACAATAACTCTAGAAAAGGAAAGTTAACCTTTAGCTATGGAGGCCATAGTTACAGTAGTTCTTTCAAGAAGCGATTGAACAGGATGAAGATTGTTTATATGGGGGAAGGAAAGAGAAAATAGAGATTAGCATGCAGGTGAAGGTGGTTTTCAATGTGGTGGGTGGTTGTTTCCGGTGGCTTGGGGGTAGGTGGTTGGGGTTGGTCAAGATGGGTTTTAACTAGGGATAGGTTAATAATTTTAGGATTAAAGTTAAATAAATGGTGGGTTAGCTGATGAAAAGAACAACTAGGGAACATTGATCATGTAGAATTTCCTTAATTTTTAAAAGAAGGTGGTTAACTTAGTAATCTTGAATTTCCATCGCATAGCAAGCCTGACATTTGTCTTTTTTCTCTCCTTGAAAATCCCAGCTGGTTCCTTGGATGCGCTTCATTTTACAATCCCATAGAATGTGACACTGATGTGTCGTGTTAATCTCAAATGGCACTGTTGCCAATATTGGCTACTATTTTTTTTTCAACTGTTGTATCAAATGACAATAACTTCTATTTGTCTAGCTACAATTAACTTGACATAATAAGCACCAATAGTTCCAGCGTATTTCCTACGGGCGTGTTGAGAAGCTATGAAGTCAGCCATTTCATATGCTAATTGTAGGTTGGAGAAGATGGAGGGTTGAGCGTCTTAACTTTCAATTTGGTAGCACTTACTTAATTGGTTGTAGGAACAACTTAACAAGAACTTAATAACATCTCAGTTGAATAGTTATTTTCTGGTTTGTTCATTTGGAGTGAGCCTTTGGAGATTGATTGCTTAAAAATTGCAGAAGTGTGTGTTTATGCTTGTGGCTGGGAATTAGAAGTCATATATCCCAACAACTATAATCTAACATCTGATGCTTAGAGAATGATGTGCATCTTGGATGTTCAATGTCGTGATTCGGTATTTCGGTGTGTATATTCTAATTTCCTTTTTGTGTGATTTGGCTTCCTCTTAAATGGGCTTTGTCGACCAATTCTCCCAACTAGATGCAATAGAAATTCTTGTTATGTAAGATTTAGCAACTTGAAAAGGAGTTTTCCTAAAGCAGAGGACTGGAAAGTGTTTTAACATCTGTGCTACTCTCTTTTCGCGGAACTTAATATTTTCTTATACATGCATAATAGTGGATTTTGTTTTTCCTGAAAGTTCATTCTGATCACCCTGAAATTGCCTCACATTGATTGGTGAAAAATGAAACTTGCACAAATTGTATTAATGCGATATAGCATATACTCTCTCCGTCCCAGAATTATAGTCCTGTTTGACTAAAAACACGGGTTTTATGAAAAGTGGAATATAGTGTATGAGAAAGTGGGAAAAGTGGAATATAGTGTATGAGAAAGTGTAAAAGGTGGAATGTGGTGTATGGGAAAGTGGGAAAGTGTATGGAAAAGTGGGAAAGTGGAATATAGTGTATGTGAAAGTGGGAAAAGTAATGTCCAAATAAGGAAACCGGACTATAAATTTGGGACGCTCGAAATAGAAAACTTGACTATAATTTTGGGACGGAGGGAGTAATCATGTTGAGGATTCATGATCCATTAATTATTTAGTTGTTTAACCTTACCTAACAGTTACTATTAGCCTGATAATAGAAGTCCTTCCCATGTAATTCAAACTTTCAATGGGATAACATCCTTTGCTTGATATTCTTGTTACATAATCAAGTTTGTTGAATTTCCGTCAGCGATGAGTTATTCCTGAGCCTGCAAAGTCTTCTCCATAAATTCCATAATGCTAACATTCTCAAATATACTCTTAGTATGTCTGTATGACCTGATTGGTCAATCTTTACGTTTTGTGCATTGTGTTGTGCTGTTGCGTACTGATGATCTTCTTTATACACTTGTGTTTTCATTAGGATTTTCATGTCAAGTTAACTATTGGGTTGTATGATATCATGCATGAACTCCTTTTCTTGAATTGTGTTTTCATTCATATAGTACTTCTTTTAACATTTTGTCCATCCCTGCAGGAATATCTTATCTTGAGAAGGAGGAGGTTCGTGTACTCTTGCGGCAGGTGAGTTCAAACAGTTATCATTTTGGAATCATACTTTTTAGCTATGCCTATAAGACATTTGGAAGAGAAAAAAAATCAACAAAATTGGGCTAATCTGTAATCTTTTTTCCTCCCCCTGTTACGAGGACAACTTTTCCTCCATTCTTGTACTTTCTGCTAGTTGCGGGTTGCCTCTGTCTTTCCTTTTTGTGTTTATTGGAAGTATATTCTTTAGATACATGCAATCTAGGCATTTAACTTATGGGGTTAATTAGGCTTATCTCCTGTTTTATTCATGGGTTTTTAATGACTAGATTATTCAGGTTGTTTGATTTTGCAGAGAACTTTGGCATTATTAATAAACTGTTTCAAAGTTTATATATATGAATGTGTTTCTATAAGTGCATTGTGTAGTTTGCCTTTTCCACTTCTTATTTATGCAGCACTATAATAATACTAGTGAGACGTGAAGACAAATTGGCAAGTCACTAATGAGCCCAAATACAAGTTAAAGGGTGTGGGAGGGTTAAGTGGAAAACCAGGTGTAGATATAGTTACAACATTGTTGCTTACCTTAAACTTTCATGTTTGATATTTTTTCCTGATTTGCCTATATGCCAGCTAGCAGATAGGAATGCATGCTTTGCACTATCTTGAGATTTTGAAAAGACTTGCTGCTGTATGCCTTATTAGGGTTGGATGTGTTATATTTGCAATTGTATGGCCATTCAACACCCTCGACGGGTGGTACGTTAACTTGTATCTGCTTTATGCGTTTTCTTATTGATTTTGGTTTTCATTTTCAGGATCCAAAGTTCTGGAAATACAGACCATTATCTGAACTCATGATCCGTGCAGCTGCTGATGATGTCCGCTTTCTGCTTTACATCTATCACAAAATGATGGAGAAGCTGAATGCCCATTCCCTGTGGAATCTTGCTCTTCGCGGTGAATTATATTGCCGCTGTTTCTGTATAAGTGACGATAACTTGACTGAATGGCCTGCTTTGCCTCCTATTCCAGGTTTGTCATTAGTTTCCTGGATGTTTGATTTGTAGCTAGTATATGAACTGATAAAAATCTAGTGGGACAGAATAAAAATTTCAGTGTATCTGCCTCTTCCAATTCTATCTGCCTCTTCCCATTCCAAACTTAGTTCCTCAAGCTTGCAATTTCATCTCTGTTTTTTAATCTTATGATAATTAGGAGCAATAGCTTAATGTAGGAAGTTTCTATCATTCCTTATTCTACCACAATACCTTCAGAATTGAAGATTTTGTGGGGGGTTGTGGCTCCCCCACCATTTGCGGGGACACCTTGGTTAAATCCACGGTGATAGGAGGGGTCTGGGGCATTTGACCACTAGTTTTCCTGGCTAACTATGCCGGATTAGTTGCATCAGAGATGAGTTGTCTAGTTGGGCCAAGAATATTTGCGGAAGAAACAAAGAAATTGGTCAAAACATTCTGCCGAAGAGTCTGCTTCTTGACCCTGCCCAAGAATGAAATAATTCACTTATAGAGTTGAATATTGTGATGGGGAAATTCGTTTTATGTGTAGAAATAAGGATCGTGTCATATGTGAAGATACAGGATTAGCATAAGAGGAGGTTGTTAGATTGTTAGAGCCGAGGAGCTATATAACTGGTGTATAAAAAGGCGCGCCTCTCGTTTTATGTGTAGAAATAAGGATCATGTCATATGTGTGGATACAGGATTAGCAAAAGAGGAGGCTGTTAGATTGTTAGAGCCGAGGAGCTATGTTACCAGAGTATAAAAAGGCTGCCTTGGCGCTGAGGGGCAAGGCGCTTGGAGCTAGCGCCTTTTATGGCCTGGGCGAGGCGATTTCGACGAGGCGCACCAGCACTAAGTCGCACCCCTTGAGGCGCTCACCGTTTTTTCACTTTTTATTAGGGGCGCCTCACTTCAGTGAGACGTACCTAAGGCGCTGGGAACTCCAAATCGCCTTGGTGCGCCTTTTTATATATTTTGTATGTTACTCAGACTACTGATTTCACCTTAAGTACATGTGTTGGATCCTCGACTCTCCGATATGGCTATGGACATTTGAAATTTCATTTTGGGCCAAAATCTTGGATTTTTATTTTTTTACAAAATAGCCAACCTGGACATGTGCCCATGGGCCACGGACGACATGGTCACCTGATTCAAGTAATGTTGTTGAGGAATGGTATAGACTAATAGCACCTTATGGAGGATAAAAAAAAAGAAAAAGGAAGGAGCTATGTCTAAGACAGTTTGGAAAATAAGGTCAAAGCTTTCTACGTCCGTGTTTGGGAGCAGTAGAGGTAAAAGAATAAATAGAAATACATGCTTGACATTTTATATATTGAGTGTCTAGATGGCCTTATGCCCTTATTAGTGGGGAAAAACTATCACTTTATTCTGTTCTTTCTGTTATTTGTTTGCTGTTACAATTGCATGTGATACCAGACTTGAATTTCCATTTTTCACTTCTTGCTTTTGGAAATAGGTGTTTGTGAGGCTCAAGCGTATAATATTCTGCGTGTTTCCATTTATTCCCTAATTCTTGTTAAAGTAGTGGTCTCAGAATGATTTGATTGCATTTAGAAGTGGTGAGGCCTCATTGATCTGATTTCTTTAAATGTTCAGATGACCTGCCCGTGGACACACAAGCTCCAGAAGAGGAAATCCTTTCTGTTCTTGATGTTCCACCAGGGAAAATGGGACGTGTGATTGGCAGAAAAGGAGCTTCAATTTTGTCAATCAAGGAATCTTGCAAGTAATTTTCACCTACTCACCTGATTTCTTAAATGCTTGAAACTTAGAAGCATCACCCGGTTCTTTGATTTGTGATATTAGTTCCCAATCTTATCAAAATTGTTTTCAAACTTAATAGAAGTGGTTATTTTCAGGGTATCTACGCGTCATACTGTATATACATCATATTGCATGAATTACATTTAACACAGTTGTGTATGTTTATGATCTACAGTGCAGAGATTCTCATCGGAGGCTCCAAGGGTCCCCCGGATAAGGTGAGTTTGGAAATCGATGGAAATACAACATTAACGCCCTATGGCTATTAGTAGATCTTATTACACTTGAGGCACATGTCTCAGCCTCACATCAGCCTTAATGGTTATTGTAATACAAACTTTTATATAAGGTGGTCTTACACAAAAGACCACATTAGTGTCATATAAGTTAAGCAATGGAACCCTTTAGTTAAGCACTGCAACCAATTAGTTAAGCACTAGAACCAATTAGTTAAGCAATGAAATCAATTAGTTAAGCGTTGGAACAAATTAGTTAAGCAATGGAATCAATTAGTCAAGCACTGGAACCAATTAGTTAAACAATGGAACTAATTAGTTAAGCACTGAAATAAATAGTTAAGCAATGAAACTTATTAGTTAAGCAATCAAAGTGGTCTTTTCGGTGGTCTTATACATTATTGTAATACATTAGCATCACTGCATCAGTTAAAATATCCCTTTTAGGGAAGGTAACCTGGATAAAGAAATGTATTGCTCTCTCATTTATTCATGAACTCATTTTTTCTACAGATGTTCAGTTCAAAATGTTAACCATTGCTATATTTCTTATACGGTGCTGTTGTTTTATGTAGGTTTTCGTTATAGGCCGAGTGAAGCAAGTGAGAAAAGCAGAGGCCATGATAAGGGGAAGAATGCTGGACATGTAGTGAGTGAACAAATAGTCTCTGATGCGATGCTTTGGTTTGTACCGATGTCAATGCAATAATAATAATAATAATAATAATAATAATTGAAACATTTTAAGACAGTTTTTCTCTCTAGTTCTGAATGGATTATTAGATCTTCATCTTAGAAACTCCAAGCAGAGTCTCCTTTGCATGAATATGTACCATTGATGTACCTTTGGCTACTTGAAAGATGATTGCTGTTGATGCATGTACCCTTTGCTTGTCATATGCTGGTTGTTTTCACTTTTCACTATGAAGATTGAAGTTTGAAGTCTGTCAACGCAATACTGAAGTTTGCCACTGAAACAATTTGTAGTAGTTTTTATGGTAAGTTCATCAATTTCGAATATGGCAAGTCACAGTGTCACACATGTAATTTGTACAAGTATGGGGGAATTTGTTAATACTATATGTTGTTTTGAACTTGTCAACAATATGTTGAATAACCAATCACTGTAACCTCATTTCAAAAACGCAAAAAGGGTCCACTAAAAATGATTGTATTTAGCGCTGGTGTAGCTTTTTCAAAAGGTCTTGCGTGCACAAGTTGTACAATAAATTTATTGTGCACCAACATAACTTTAATCTAGTTTTCTCTAACTTTTACTCAGTTTTCTCTAACTTTTATACTATTACAAAAAAAGTTAATAGATAAACATTTTAGAGTGTTAAATGATTAATTTTATACATTATTAGTGATTTTGAATAAATATTTTTTATTAAAATGAAAATTTTTATTACTAAAAAGTAGATAACTTTTACCTATATAATGGTGACTTTTAAGCATTTTACGTCAACTTTAACTTCGGTGTACAATATTTATCGTACACCTTATGTAAATAAGAATTTGTGTAGCCTTTTCTGTTGTTTGTATTCTGCAAGGATTATACTTCGTATCTTACAATCCTGAGGTTATGATTTTTTGGATCAGTTTTCACTGTTAGACTTTTAGGGGTGAGGGTAAATTTTTTAAATTTTTTGTGTTTTACCACCTATAAAAATCTGAATTTATGTTTTATCAACTAAAAGTCTTAAATTTTTATTTTATCATTTAATTTAAAAAAAAAATATTTTACCACCTTTTAGCGGCAAAGTTATCAATACTGTTAGTGGAGCTCACAAATTAGGCTCCTCATGCGATTTTCTTCTTCACCCCTCATTCTCATTCAATTTTCACCTTTTTCTGCACTCCTCTTCAATTCTCACCACCATTTTCTGCACTTCAAATCTCCAAATTAATTAAATTACAAACTTATATTATACAACATGTTTAAAAACATCGTATAATTTTATAAGAAAAATTGTTATACTAGGCGTNTAAAAGTCTTAAATTTTTATTTTATCATTTAATTTTTAAAAAAAATATTTTACCACCTTTTAGCGGCAAAGTTATCAACACTGTTAGTGGAGCTCACAAATTAGGCTTCCTCATGCGATTTTCTTCTTCACCCCTCATTCTCATTCAATTTTCACCTTCTTCTGCACTCCTCTTCAATTCTCACCACCATTTTCTGCACTTCAAATCTCCAAATTAATTAAATTACAAACTTATATTATACAACATGTTTAAAAATATCGTATAATTTTATAAGAAAAATTGTTATACTAGGCGTTGAAGTGGGCACGGTAATGATTTCGTTAACTTTATTGTTAAAAGGTGATAAAACAATTTTTTTTTTTAGGTGGTAAAATAAAAGTTTAAGATTTAGGTGGTAAAACACAAATGTGGATTTTTTTTAAGTGGTAAACACAAAAAATAAAAAATAAAAAATTAGGGTTGAGGATTTACTTACACTTGCTCACAACTTTTTGGCCTTATTCGTTTATCGAGTCGGGTGATCTACATAAGTTTCATGCTTCCAGCTCGATGGAACTCCTCTTTACCTACCTAAAAACAAATAAAAATTAAAAGTTACCTTAATAGTTTTAAAAAATGTTTAATTTTTCCTTGCATACATTATACAATATTTCTGTAAATAAAACCTTATATACTATGTTTTTTAAAATCTTAAGTTATCATTCTTATTTTGTCACGACAATTAAATATTTCTAAAGTATTGTAGTAGTTTTTAGCCATTGCGAGTTGGGATGCATAGAATCGTTTTTAATTATTTTGGTAGTATAAAATTATACAAGTACTTTTTTACTCACGTGATGATTAAAATAACATCATCACACCGGTGTAAAATGTGATTATATAAAGGTTTATTTGTCTATTTTTCATTTCTTAATAAACAAGTTAAAGTTGAATAATGTAATAATCTCTTAAAGCAAATGAATAGAATAAATGCTCGTTTTTCATGGTGCACCTGTTTATAAAACCAAAACGCTTTAATTGGAAGCTTAACGGACAAACGTTAAAAGTGGTAAATAGTCAATTGTTTAGCCTCTTAATTTTTCATCGGGACCATAAGTACTTAATCTCAATGGTAATTGGATTATACAAAAAGTTACACTCGTCAATCATCGCAAATCAACATAACATACTCTAGTACTTTTTCTACAAAAATGAAAGGTGTTGGTGAATTTAACTCGCGGTGCTTTGCAAAATGTGGTGCAAATGGTATCAACAAATCTTCATAATATATTAATAAAAAAAAAATGTCAAATNAAAATGTGGTGCAAATGGTATCAACAAATCTTCATAATATATTAATAAAAAAAAAATGTCAAATCACTACATTTAAATATAATGAAATTATAAACGACATACTCACAACGTACAATTCATTTAAAAGGTTAATTTGTAAAATACAATGAAACCTACACAACCTATATGATCGTGATTTATAACAAAGCACATCAAGTAAACGATTACGATACTATGTGCATATGGATGAAGTAGTAATGAAAATTTCTCATCTTGTATACTTGTGGTAAAAAAGTCCCACATAAACACTAACTAGATTTAAAGCCCGTGCGATGCACGGGTTAAATTCATTTTTTTATGAGATTTTTTTTTTCACCTTTAAATGATAGTTAGAATATTGATTTTTTTTTTTAATTTTTTATAATCAATTAGTATGACAGTTTTAACGGGTCTTTGTTTATCTATTAAAAATTTTCAAAATTTATCTCTTATTATCTTTTATCAAGTCTTTAATTATCTCTTTTTATTTTTCTTGAAACACGTACTTTTATTTTTCAATCGTTTCTGCTTGAATTAATGGCTCGAATCAACGAAATATTTCTGAAACTTAATCAAAATTTATCTCTTATTATCTTTTATCAAGTCTTTAATTATCTCTTTTTATTTTTCTTGAAACACGTACTTTTATTTTTCAATCGTTTCTGCTTGAATTAATGGCTCGAATCAACGAAATATTTCTGAAACTTAATCAAAATTTATCTCTTATTATCTTTTATCAAGTCTTTAATTATCTCTTTTTATTTTTCTTGAAACACGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGTTTATAAGCGAGATCTTGGTTCACTTATATCCAGATATGTTTAGTTTACAAATACATATATAAATGGATCAATGTTTATTTTGTTTGACAGTTTCTGCCTATTTATGTCTTAATCAGGGGCTCTGGTGTCTTACGCCCTAGATACAAATACATCTATACTTGGGTCATAGTGTCTGGTACTTTTTTATAGTTTTTGCCCTGATTTCAAATGTGTTATTGCATGAGAATATAAGTTCCCTAATGGTTGAAAATAAAAATAGCGCAAGTAGATTACTAGATTTGTGTCATCTTAGGGGAAACTTATGTGGTTCAGGATAGGATAAGTTACTTAAGATTTGGCTCGTTGTGTCGTTTGGTTGCGGTGGTGGGTTGCCTGTTCTGCTGAGCTAGGTTCCTGAATTTTTTTGAGTCTGATTGGCCTGTTTTTATTATGGTTCTTGTCAGGCTAGCTCTACTATGTTTTCAGGTGCGACATTATGGGTGATATAGGTATTTTACAGATTGTTGTTGGTTTCTGGTGGCTGCACAGTTTCTGCATGAGGATGTTTGTTTTGCAGCTGGAAGGATTGTTGCAGTCAGTCAAAGGTGGTATGCTTCCAGTGATTGACTGTTGCGCAGCTGTTCTGCTCTGTTTGGCTGTTGTTGGCAGTGTTTCAGGTGTGGTGTTGCTGCATGGGGGTAGTGGTTGTCACTGCTTGTTTGTTGTCAACCATAAAGTATATTGGGAATTGTACATCAGGTATTGTTGGATCTGTTCTGCATTCTTTATTGTTTTAAACAATTTCGTAAGTTTGTGACTTTTACTCTTTGCACTCATTTGTTTAGTTTTCTTCTGGCTTGTCTAACACTGCTCATGTCTTTGTAGTCCATATGTTAGGTTAACCAGCACTAGGACGAAGATCAATGGCGAGTCTTCTTTCATGGAGATCTCAACCAACGGCCATAAAGACGAGAGATTATCGCCTTTTAACTCGACTTATGCAGTGAGGTTTAAAGAGGATATAAAGAGGTGGGCGAGAGGCGGTGTGAGATATGCAACCATTGTAGTAGCTCTTGTGATCTACATAAGGGTGGTGGTTTTGGGGAATTTTTGTGTAATTGATTTTTTTTTCCGCTCAACTCCTTTTCTCGGGGTTTTCTCCCATAATCGCTCTGCTTGTTTGCTAATTTTGTTATGA

mRNA sequence

GAAACCCAAAGAAGAAAAAGAAAAAAAAATACAAAAGTGGGATTTGAGCCAAAAATCCGATCAGTCTTGTAATGGTCTGATCAGATGGCGGACGATCCTTCTTCGCACCATGCCCATGTCCCATTGCCTTCGAACTTAGGTGGGTTAGTTTCAGATGATGCTCCACTGGTTCCGATTCATATTGTCACCGAAGCTTCCCAGCTTCCTGTGGAGTTCTTAGAACCCTGTCCTGAAACAAAGCTGGTTATTGGCTTTGATTGTGAAGGTGTTGACCTGTGTCGTTATGGAACTCTTTGTATAATGCAGCTTGCATTTCCTGATGCTATATATCTTGTGGATGCCATAGAAGGTGGAGACATGCTCATAGAAGCGTGTAAGCCTGCTCTTGAATCTAGATACATCACTAAAGTTATACATGACTGCAAACGTGATAGTGAGGCACTGTATTTCCAGTTTGGCATCAAGTTACAAAATGTCATGGATACCCAGATAGCGTATTCCTTGATCGAAGAACAGGAAGGACGACCAAGAGTGCCTGATGACTACATCTCATTTGTTGCTCTTCTTGCAGATCCACGCTATTGTGGAATATCTTATCTTGAGAAGGAGGAGGTTCGTGTACTCTTGCGGCAGGATCCAAAGTTCTGGAAATACAGACCATTATCTGAACTCATGATCCGTGCAGCTGCTGATGATGTCCGCTTTCTGCTTTACATCTATCACAAAATGATGGAGAAGCTGAATGCCCATTCCCTGTGGAATCTTGCTCTTCGCGGTGAATTATATTGCCGCTGTTTCTGTATAAGTGACGATAACTTGACTGAATGGCCTGCTTTGCCTCCTATTCCAGATGACCTGCCCGTGGACACACAAGCTCCAGAAGAGGAAATCCTTTCTGTTCTTGATGTTCCACCAGGGAAAATGGGACGTGTGATTGGCAGAAAAGGAGCTTCAATTTTGTCAATCAAGGAATCTTGCAATGCAGAGATTCTCATCGGAGGCTCCAAGGGTCCCCCGGATAAGGTTTTCGTTATAGGCCGAGTGAAGCAAGTGAGAAAAGCAGAGGCCATGATAAGGGGAAGAATGCTGGACATGTAGTGCGACATTATGGGTGATATAGGTATTTTACAGATTGTTGTTGGTTTCTGGTGGCTGCACAGTTTCTGCATGAGGATGTTTGTTTTGCAGCTGGAAGGATTGTTGCAGTCAGTCAAAGGTGGTATGCTTCCAGTGATTGACTGTTGCGCAGCTGTTCTGCTCTGTTTGGCTGTTGTTGGCAGTGTTTCAGGTGTGGTGTTGCTGCATGGGGGTAGTGGTTGTCACTGCTTGTTTGTTGTCAACCATAAAGTATATTGGGAATTGTACATCAGTCCATATGTTAGGTTAACCAGCACTAGGACGAAGATCAATGGCGAGTCTTCTTTCATGGAGATCTCAACCAACGGCCATAAAGACGAGAGATTATCGCCTTTTAACTCGACTTATGCAGTGAGGTTTAAAGAGGATATAAAGAGGTGGGCGAGAGGCGGTGTGAGATATGCAACCATTGTAGTAGCTCTTGTGATCTACATAAGGGTGGTGGTTTTGGGGAATTTTTGTGTAATTGATTTTTTTTTCCGCTCAACTCCTTTTCTCGGGGTTTTCTCCCATAATCGCTCTGCTTGTTTGCTAATTTTGTTATGA

Coding sequence (CDS)

ATGGCGGACGATCCTTCTTCGCACCATGCCCATGTCCCATTGCCTTCGAACTTAGGTGGGTTAGTTTCAGATGATGCTCCACTGGTTCCGATTCATATTGTCACCGAAGCTTCCCAGCTTCCTGTGGAGTTCTTAGAACCCTGTCCTGAAACAAAGCTGGTTATTGGCTTTGATTGTGAAGGTGTTGACCTGTGTCGTTATGGAACTCTTTGTATAATGCAGCTTGCATTTCCTGATGCTATATATCTTGTGGATGCCATAGAAGGTGGAGACATGCTCATAGAAGCGTGTAAGCCTGCTCTTGAATCTAGATACATCACTAAAGTTATACATGACTGCAAACGTGATAGTGAGGCACTGTATTTCCAGTTTGGCATCAAGTTACAAAATGTCATGGATACCCAGATAGCGTATTCCTTGATCGAAGAACAGGAAGGACGACCAAGAGTGCCTGATGACTACATCTCATTTGTTGCTCTTCTTGCAGATCCACGCTATTGTGGAATATCTTATCTTGAGAAGGAGGAGGTTCGTGTACTCTTGCGGCAGGATCCAAAGTTCTGGAAATACAGACCATTATCTGAACTCATGATCCGTGCAGCTGCTGATGATGTCCGCTTTCTGCTTTACATCTATCACAAAATGATGGAGAAGCTGAATGCCCATTCCCTGTGGAATCTTGCTCTTCGCGGTGAATTATATTGCCGCTGTTTCTGTATAAGTGACGATAACTTGACTGAATGGCCTGCTTTGCCTCCTATTCCAGATGACCTGCCCGTGGACACACAAGCTCCAGAAGAGGAAATCCTTTCTGTTCTTGATGTTCCACCAGGGAAAATGGGACGTGTGATTGGCAGAAAAGGAGCTTCAATTTTGTCAATCAAGGAATCTTGCAATGCAGAGATTCTCATCGGAGGCTCCAAGGGTCCCCCGGATAAGGTTTTCGTTATAGGCCGAGTGAAGCAAGTGAGAAAAGCAGAGGCCATGATAAGGGGAAGAATGCTGGACATGTAG

Protein sequence

MADDPSSHHAHVPLPSNLGGLVSDDAPLVPIHIVTEASQLPVEFLEPCPETKLVIGFDCEGVDLCRYGTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEALYFQFGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVLLRQDPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKLNAHSLWNLALRGELYCRCFCISDDNLTEWPALPPIPDDLPVDTQAPEEEILSVLDVPPGKMGRVIGRKGASILSIKESCNAEILIGGSKGPPDKVFVIGRVKQVRKAEAMIRGRMLDM

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo14397	Spo14397	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo14397.1	Spo14397.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14397.1.exon.1	Spo14397.1.exon.1	exon
Spo14397.1.exon.2	Spo14397.1.exon.2	exon
Spo14397.1.exon.3	Spo14397.1.exon.3	exon
Spo14397.1.exon.4	Spo14397.1.exon.4	exon
Spo14397.1.exon.5	Spo14397.1.exon.5	exon
Spo14397.1.exon.6	Spo14397.1.exon.6	exon
Spo14397.1.exon.7	Spo14397.1.exon.7	exon
Spo14397.1.exon.8	Spo14397.1.exon.8	exon
Spo14397.1.exon.9	Spo14397.1.exon.9	exon
Spo14397.1.exon.10	Spo14397.1.exon.10	exon
Spo14397.1.exon.11	Spo14397.1.exon.11	exon
Spo14397.1.exon.12	Spo14397.1.exon.12	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14397.1.utr5p.1	Spo14397.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14397.1.CDS.1	Spo14397.1.CDS.1	CDS
Spo14397.1.CDS.2	Spo14397.1.CDS.2	CDS
Spo14397.1.CDS.3	Spo14397.1.CDS.3	CDS
Spo14397.1.CDS.4	Spo14397.1.CDS.4	CDS
Spo14397.1.CDS.5	Spo14397.1.CDS.5	CDS
Spo14397.1.CDS.6	Spo14397.1.CDS.6	CDS
Spo14397.1.CDS.7	Spo14397.1.CDS.7	CDS
Spo14397.1.CDS.8	Spo14397.1.CDS.8	CDS
Spo14397.1.CDS.9	Spo14397.1.CDS.9	CDS
Spo14397.1.CDS.10	Spo14397.1.CDS.10	CDS
Spo14397.1.CDS.11	Spo14397.1.CDS.11	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14397.1.utr3p.1	Spo14397.1.utr3p.1	three_prime_UTR
Spo14397.1.utr3p.2	Spo14397.1.utr3p.2	three_prime_UTR

Homology

[Close]

BLAST of Spo14397.1 vs. NCBI nr
Match: gi|902233479|gb|KNA23074.1| (hypothetical protein SOVF_028180 [Spinacia oleracea])

HSP 1 Score: 693.0 bits (1787), Expect = 2.700e-196
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 1


		  
Query: 1   MADDPSSHHAHVPLPSNLGGLVSDDAPLVPIHIVTEASQLPVEFLEPCPETKLVIGFDCE 60
           MADDPSSHHAHVPLPSNLGGLVSDDAPLVPIHIVTEASQLPVEFLEPCPETKLVIGFDCE
Sbjct: 1   MADDPSSHHAHVPLPSNLGGLVSDDAPLVPIHIVTEASQLPVEFLEPCPETKLVIGFDCE 60

Query: 61  GVDLCRYGTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEAL 120
           GVDLCRYGTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEAL
Sbjct: 61  GVDLCRYGTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEAL 120

Query: 121 YFQFGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVL 180
           YFQFGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVL
Sbjct: 121 YFQFGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVL 180

Query: 181 LRQDPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKLNAHSLWNLALRGELYCRCFCI 240
           LRQDPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKLNAHSLWNLALRGELYCRCFCI
Sbjct: 181 LRQDPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKLNAHSLWNLALRGELYCRCFCI 240

Query: 241 SDDNLTEWPALPPIPDDLPVDTQAPEEEILSVLDVPPGKMGRVIGRKGASILSIKESCNA 300
           SDDNLTEWPALPPIPDDLPVDTQAPEEEILSVLDVPPGKMGRVIGRKGASILSIKESCNA
Sbjct: 241 SDDNLTEWPALPPIPDDLPVDTQAPEEEILSVLDVPPGKMGRVIGRKGASILSIKESCNA 300

Query: 301 EILIGGSKGPPDKVFVIGRVKQVRKAEAMIRGRMLDM 338
           EILIGGSKGPPDKVFVIGRVKQVRKAEAMIRGRMLDM
Sbjct: 301 EILIGGSKGPPDKVFVIGRVKQVRKAEAMIRGRMLDM 337

[Close]

BLAST of Spo14397.1 vs. NCBI nr
Match: gi|731317481|ref|XP_010669101.1| (PREDICTED: exosome complex exonuclease rrp6 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 622.9 bits (1605), Expect = 3.400e-175
Identity = 300/337 (89.02%), Postives = 319/337 (94.66%), Query Frame = 1


		  
Query: 1   MADDPSSHHAHVPLPSNLGGLVSDDAPLVPIHIVTEASQLPVEFLEPCPETKLVIGFDCE 60
           MADD  SH AHVPLP + GGLVSDDA LVPIHIVTEASQLPVEFL+PCP+TKLVIGFDCE
Sbjct: 1   MADDLPSHQAHVPLPLDPGGLVSDDATLVPIHIVTEASQLPVEFLKPCPQTKLVIGFDCE 60

Query: 61  GVDLCRYGTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEAL 120
           GVDLCRYG LCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEAL
Sbjct: 61  GVDLCRYGALCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEAL 120

Query: 121 YFQFGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVL 180
           YFQFGIKL NVMDTQIAYSLIE QEGRPRVPDDYISFV+LLADPRYCGISYLEKEEVRVL
Sbjct: 121 YFQFGIKLHNVMDTQIAYSLIEVQEGRPRVPDDYISFVSLLADPRYCGISYLEKEEVRVL 180

Query: 181 LRQDPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKLNAHSLWNLALRGELYCRCFCI 240
           LRQDP FWKYRPLSELMIRAAADDVRFLLYIYHK+ EKLNA SLW+LA+RGELYCRCFCI
Sbjct: 181 LRQDPNFWKYRPLSELMIRAAADDVRFLLYIYHKLTEKLNAQSLWSLAIRGELYCRCFCI 240

Query: 241 SDDNLTEWPALPPIPDDLPVDTQAPEEEILSVLDVPPGKMGRVIGRKGASILSIKESCNA 300
           SD++ ++WP LPPIPDD+ +DT+ PEEEILSVL+VPPGKMGRVIG+KGASILSIK+SCNA
Sbjct: 241 SDNDFSDWPDLPPIPDDVAMDTEPPEEEILSVLNVPPGKMGRVIGKKGASILSIKKSCNA 300

Query: 301 EILIGGSKGPPDKVFVIGRVKQVRKAEAMIRGRMLDM 338
           EILIGGSKGPPDKVF+IG VKQVRKAEAM+RG MLDM
Sbjct: 301 EILIGGSKGPPDKVFIIGPVKQVRKAEAMLRGTMLDM 337

[Close]

BLAST of Spo14397.1 vs. NCBI nr
Match: gi|590573811|ref|XP_007012225.1| (3'-5' exonuclease domain-containing protein / K domain-containing protein / KH domain-containing protein isoform 2 [Theobroma cacao])

HSP 1 Score: 562.8 bits (1449), Expect = 4.100e-157
Identity = 272/334 (81.44%), Postives = 297/334 (88.92%), Query Frame = 1


		  
Query: 5   PSSHHAHVPLPSNLGGLVSD-DAPLVPIHIVTEASQLPVEFLEPCPETKLVIGFDCEGVD 64
           P SH  HVP PSN GG   D +AP+VPIHIVT ASQLPVEFL P PE  LV+GFDCEGVD
Sbjct: 7   PPSHRTHVPFPSNSGGKPLDNEAPMVPIHIVTNASQLPVEFLNPSPERPLVVGFDCEGVD 66

Query: 65  LCRYGTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEALYFQ 124
           LCR+GTLCIMQLAFPDAIYLVDAIEGG+ LI+ACKPALES YI KVIHDCKRDSEALYFQ
Sbjct: 67  LCRHGTLCIMQLAFPDAIYLVDAIEGGEALIKACKPALESSYIKKVIHDCKRDSEALYFQ 126

Query: 125 FGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVLLRQ 184
           FGIKL NVMDTQIAYSLIEEQEGR R+  DYISFV+LLADPRYCGISY EKEEVR+LLRQ
Sbjct: 127 FGIKLHNVMDTQIAYSLIEEQEGRTRLLYDYISFVSLLADPRYCGISYQEKEEVRLLLRQ 186

Query: 185 DPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKLNAHSLWNLALRGELYCRCFCISDD 244
           DPKFW YRPLSELM+RAA DDVRFLLYIYH MMEKLN  SLW LA+RG LYCRCFCI+D+
Sbjct: 187 DPKFWTYRPLSELMVRAATDDVRFLLYIYHMMMEKLNQRSLWYLAVRGALYCRCFCINDN 246

Query: 245 NLTEWPALPPIPDDLPVDTQAPEEEILSVLDVPPGKMGRVIGRKGASILSIKESCNAEIL 304
           N  +WP++PPIPD L  +  APEEEILS+LDVPPGKMGR+IGRKGASILSIKESCNAEIL
Sbjct: 247 NYADWPSVPPIPDHL--EGNAPEEEILSILDVPPGKMGRIIGRKGASILSIKESCNAEIL 306

Query: 305 IGGSKGPPDKVFVIGRVKQVRKAEAMIRGRMLDM 338
           +GG+KGPPDKVF+IG VKQVRKAEAM+RGRM+D+
Sbjct: 307 VGGAKGPPDKVFIIGPVKQVRKAEAMLRGRMVDL 338

[Close]

BLAST of Spo14397.1 vs. NCBI nr
Match: gi|1009135694|ref|XP_015885122.1| (PREDICTED: exonuclease 3'-5' domain-containing protein 1 [Ziziphus jujuba])

HSP 1 Score: 559.3 bits (1440), Expect = 4.600e-156
Identity = 268/345 (77.68%), Postives = 306/345 (88.70%), Query Frame = 1


		  
Query: 1   MADDPSSHHAHVPLPSNLGGLVSDDAPL--------VPIHIVTEASQLPVEFLEPCPETK 60
           MA  PS +H H+PLPS+     SDD PL        VPI+IVT ASQLP EFLEP  E +
Sbjct: 1   MASGPSPYHTHIPLPSD-----SDDKPLKHEADLSVVPIYIVTHASQLPAEFLEPSSERQ 60

Query: 61  LVIGFDCEGVDLCRYGTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHD 120
           L+IGFDCEGVDLCR+GTLCIMQLAF DAIYLVD+I+GG+MLI+ACKPALES YITKVIHD
Sbjct: 61  LIIGFDCEGVDLCRHGTLCIMQLAFSDAIYLVDSIQGGEMLIKACKPALESSYITKVIHD 120

Query: 121 CKRDSEALYFQFGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYL 180
           CKRDSEALYFQFGIKL NV+DTQIAYSL+EEQEGR R PDDYISFV+LLADPRYCGISYL
Sbjct: 121 CKRDSEALYFQFGIKLNNVVDTQIAYSLLEEQEGRARTPDDYISFVSLLADPRYCGISYL 180

Query: 181 EKEEVRVLLRQDPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKLNAHSLWNLALRGE 240
           EKEEVRVLLRQDPKFW YRPLSE+M+RAAADDVRFLLYIY+KMMEKL+  S+W+LA+RG 
Sbjct: 181 EKEEVRVLLRQDPKFWTYRPLSEMMVRAAADDVRFLLYIYNKMMEKLSQRSMWHLAVRGA 240

Query: 241 LYCRCFCISDDNLTEWPALPPIPDDLPVDTQAPEEEILSVLDVPPGKMGRVIGRKGASIL 300
           LYCRC+CI+D++  +WP+LPPIPD++  +  APEEEILSVLDVPPGKMGRVIGR+GASI+
Sbjct: 241 LYCRCYCINDNDYADWPSLPPIPDNIIAEQNAPEEEILSVLDVPPGKMGRVIGRRGASIM 300

Query: 301 SIKESCNAEILIGGSKGPPDKVFVIGRVKQVRKAEAMIRGRMLDM 338
           SIKESCNAEILIGGS+GPPDK+F+IG V+QVRKAEAM+RGRML+M
Sbjct: 301 SIKESCNAEILIGGSRGPPDKIFIIGLVQQVRKAEAMLRGRMLEM 340

[Close]

BLAST of Spo14397.1 vs. NCBI nr
Match: gi|823227648|ref|XP_012446620.1| (PREDICTED: exosome complex exonuclease rrp6 isoform X2 [Gossypium raimondii])

HSP 1 Score: 557.4 bits (1435), Expect = 1.700e-155
Identity = 268/336 (79.76%), Postives = 296/336 (88.10%), Query Frame = 1


		  
Query: 2   ADDPSSHHAHVPLPSNLGGLVSDD-APLVPIHIVTEASQLPVEFLEPCPETKLVIGFDCE 61
           ++ P SH  HVPLPS+ GG   DD AP VPIHIVT ASQLP EFL P PE +LV+GFDCE
Sbjct: 4   SNHPPSHRTHVPLPSDSGGNPFDDEAPPVPIHIVTNASQLPAEFLNPSPEKQLVVGFDCE 63

Query: 62  GVDLCRYGTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEAL 121
           GVDLCR GTLCIMQLAF DAIYLVDAIEGG++LI ACKPALES YI KVIHDCKRDSEAL
Sbjct: 64  GVDLCRNGTLCIMQLAFQDAIYLVDAIEGGEVLINACKPALESSYIKKVIHDCKRDSEAL 123

Query: 122 YFQFGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVL 181
           YFQFGIKL NVMDTQIAYSL+EEQEGR R+PDD ISFV LLADPRYCGISY EKEEVR+L
Sbjct: 124 YFQFGIKLNNVMDTQIAYSLLEEQEGRTRLPDDNISFVGLLADPRYCGISYQEKEEVRLL 183

Query: 182 LRQDPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKLNAHSLWNLALRGELYCRCFCI 241
           LRQDPKFWKYRPLSELM+RAAADDVRFLLYIYH MM+KLN  SLW+LA+RG LYCRCFCI
Sbjct: 184 LRQDPKFWKYRPLSELMVRAAADDVRFLLYIYHMMMKKLNERSLWHLAVRGALYCRCFCI 243

Query: 242 SDDNLTEWPALPPIPDDLPVDTQAPEEEILSVLDVPPGKMGRVIGRKGASILSIKESCNA 301
           +D+N  +WP++PPIPD+L V+  APEEEILS+LDVP GKMGRVIGRKG SILSIKESCNA
Sbjct: 244 NDNNYADWPSIPPIPDNLMVEGDAPEEEILSILDVPQGKMGRVIGRKGVSILSIKESCNA 303

Query: 302 EILIGGSKGPPDKVFVIGRVKQVRKAEAMIRGRMLD 337
           EI  GG+KGPPDKVF++G V+QVRKA AM+RGRM+D
Sbjct: 304 EIHFGGAKGPPDKVFILGPVRQVRKAAAMLRGRMMD 339

[Close]

BLAST of Spo14397.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RVX5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_028180 PE=4 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 1.900e-196
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 1


		  
Query: 1   MADDPSSHHAHVPLPSNLGGLVSDDAPLVPIHIVTEASQLPVEFLEPCPETKLVIGFDCE 60
           MADDPSSHHAHVPLPSNLGGLVSDDAPLVPIHIVTEASQLPVEFLEPCPETKLVIGFDCE
Sbjct: 1   MADDPSSHHAHVPLPSNLGGLVSDDAPLVPIHIVTEASQLPVEFLEPCPETKLVIGFDCE 60

Query: 61  GVDLCRYGTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEAL 120
           GVDLCRYGTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEAL
Sbjct: 61  GVDLCRYGTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEAL 120

Query: 121 YFQFGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVL 180
           YFQFGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVL
Sbjct: 121 YFQFGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVL 180

Query: 181 LRQDPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKLNAHSLWNLALRGELYCRCFCI 240
           LRQDPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKLNAHSLWNLALRGELYCRCFCI
Sbjct: 181 LRQDPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKLNAHSLWNLALRGELYCRCFCI 240

Query: 241 SDDNLTEWPALPPIPDDLPVDTQAPEEEILSVLDVPPGKMGRVIGRKGASILSIKESCNA 300
           SDDNLTEWPALPPIPDDLPVDTQAPEEEILSVLDVPPGKMGRVIGRKGASILSIKESCNA
Sbjct: 241 SDDNLTEWPALPPIPDDLPVDTQAPEEEILSVLDVPPGKMGRVIGRKGASILSIKESCNA 300

Query: 301 EILIGGSKGPPDKVFVIGRVKQVRKAEAMIRGRMLDM 338
           EILIGGSKGPPDKVFVIGRVKQVRKAEAMIRGRMLDM
Sbjct: 301 EILIGGSKGPPDKVFVIGRVKQVRKAEAMIRGRMLDM 337

[Close]

BLAST of Spo14397.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CW63_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g033030 PE=4 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 2.400e-175
Identity = 300/337 (89.02%), Postives = 319/337 (94.66%), Query Frame = 1


		  
Query: 1   MADDPSSHHAHVPLPSNLGGLVSDDAPLVPIHIVTEASQLPVEFLEPCPETKLVIGFDCE 60
           MADD  SH AHVPLP + GGLVSDDA LVPIHIVTEASQLPVEFL+PCP+TKLVIGFDCE
Sbjct: 1   MADDLPSHQAHVPLPLDPGGLVSDDATLVPIHIVTEASQLPVEFLKPCPQTKLVIGFDCE 60

Query: 61  GVDLCRYGTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEAL 120
           GVDLCRYG LCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEAL
Sbjct: 61  GVDLCRYGALCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEAL 120

Query: 121 YFQFGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVL 180
           YFQFGIKL NVMDTQIAYSLIE QEGRPRVPDDYISFV+LLADPRYCGISYLEKEEVRVL
Sbjct: 121 YFQFGIKLHNVMDTQIAYSLIEVQEGRPRVPDDYISFVSLLADPRYCGISYLEKEEVRVL 180

Query: 181 LRQDPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKLNAHSLWNLALRGELYCRCFCI 240
           LRQDP FWKYRPLSELMIRAAADDVRFLLYIYHK+ EKLNA SLW+LA+RGELYCRCFCI
Sbjct: 181 LRQDPNFWKYRPLSELMIRAAADDVRFLLYIYHKLTEKLNAQSLWSLAIRGELYCRCFCI 240

Query: 241 SDDNLTEWPALPPIPDDLPVDTQAPEEEILSVLDVPPGKMGRVIGRKGASILSIKESCNA 300
           SD++ ++WP LPPIPDD+ +DT+ PEEEILSVL+VPPGKMGRVIG+KGASILSIK+SCNA
Sbjct: 241 SDNDFSDWPDLPPIPDDVAMDTEPPEEEILSVLNVPPGKMGRVIGKKGASILSIKKSCNA 300

Query: 301 EILIGGSKGPPDKVFVIGRVKQVRKAEAMIRGRMLDM 338
           EILIGGSKGPPDKVF+IG VKQVRKAEAM+RG MLDM
Sbjct: 301 EILIGGSKGPPDKVFIIGPVKQVRKAEAMLRGTMLDM 337

[Close]

BLAST of Spo14397.1 vs. UniProtKB/TrEMBL
Match: A0A061GRT9_THECC (3'-5' exonuclease domain-containing protein / K domain-containing protein / KH domain-containing protein isoform 2 OS=Theobroma cacao GN=TCM_037248 PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 2.900e-157
Identity = 272/334 (81.44%), Postives = 297/334 (88.92%), Query Frame = 1


		  
Query: 5   PSSHHAHVPLPSNLGGLVSD-DAPLVPIHIVTEASQLPVEFLEPCPETKLVIGFDCEGVD 64
           P SH  HVP PSN GG   D +AP+VPIHIVT ASQLPVEFL P PE  LV+GFDCEGVD
Sbjct: 7   PPSHRTHVPFPSNSGGKPLDNEAPMVPIHIVTNASQLPVEFLNPSPERPLVVGFDCEGVD 66

Query: 65  LCRYGTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEALYFQ 124
           LCR+GTLCIMQLAFPDAIYLVDAIEGG+ LI+ACKPALES YI KVIHDCKRDSEALYFQ
Sbjct: 67  LCRHGTLCIMQLAFPDAIYLVDAIEGGEALIKACKPALESSYIKKVIHDCKRDSEALYFQ 126

Query: 125 FGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVLLRQ 184
           FGIKL NVMDTQIAYSLIEEQEGR R+  DYISFV+LLADPRYCGISY EKEEVR+LLRQ
Sbjct: 127 FGIKLHNVMDTQIAYSLIEEQEGRTRLLYDYISFVSLLADPRYCGISYQEKEEVRLLLRQ 186

Query: 185 DPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKLNAHSLWNLALRGELYCRCFCISDD 244
           DPKFW YRPLSELM+RAA DDVRFLLYIYH MMEKLN  SLW LA+RG LYCRCFCI+D+
Sbjct: 187 DPKFWTYRPLSELMVRAATDDVRFLLYIYHMMMEKLNQRSLWYLAVRGALYCRCFCINDN 246

Query: 245 NLTEWPALPPIPDDLPVDTQAPEEEILSVLDVPPGKMGRVIGRKGASILSIKESCNAEIL 304
           N  +WP++PPIPD L  +  APEEEILS+LDVPPGKMGR+IGRKGASILSIKESCNAEIL
Sbjct: 247 NYADWPSVPPIPDHL--EGNAPEEEILSILDVPPGKMGRIIGRKGASILSIKESCNAEIL 306

Query: 305 IGGSKGPPDKVFVIGRVKQVRKAEAMIRGRMLDM 338
           +GG+KGPPDKVF+IG VKQVRKAEAM+RGRM+D+
Sbjct: 307 VGGAKGPPDKVFIIGPVKQVRKAEAMLRGRMVDL 338

[Close]

BLAST of Spo14397.1 vs. UniProtKB/TrEMBL
Match: A0A0D2TDN5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G047400 PE=4 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 1.200e-155
Identity = 268/336 (79.76%), Postives = 296/336 (88.10%), Query Frame = 1


		  
Query: 2   ADDPSSHHAHVPLPSNLGGLVSDD-APLVPIHIVTEASQLPVEFLEPCPETKLVIGFDCE 61
           ++ P SH  HVPLPS+ GG   DD AP VPIHIVT ASQLP EFL P PE +LV+GFDCE
Sbjct: 4   SNHPPSHRTHVPLPSDSGGNPFDDEAPPVPIHIVTNASQLPAEFLNPSPEKQLVVGFDCE 63

Query: 62  GVDLCRYGTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEAL 121
           GVDLCR GTLCIMQLAF DAIYLVDAIEGG++LI ACKPALES YI KVIHDCKRDSEAL
Sbjct: 64  GVDLCRNGTLCIMQLAFQDAIYLVDAIEGGEVLINACKPALESSYIKKVIHDCKRDSEAL 123

Query: 122 YFQFGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVL 181
           YFQFGIKL NVMDTQIAYSL+EEQEGR R+PDD ISFV LLADPRYCGISY EKEEVR+L
Sbjct: 124 YFQFGIKLNNVMDTQIAYSLLEEQEGRTRLPDDNISFVGLLADPRYCGISYQEKEEVRLL 183

Query: 182 LRQDPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKLNAHSLWNLALRGELYCRCFCI 241
           LRQDPKFWKYRPLSELM+RAAADDVRFLLYIYH MM+KLN  SLW+LA+RG LYCRCFCI
Sbjct: 184 LRQDPKFWKYRPLSELMVRAAADDVRFLLYIYHMMMKKLNERSLWHLAVRGALYCRCFCI 243

Query: 242 SDDNLTEWPALPPIPDDLPVDTQAPEEEILSVLDVPPGKMGRVIGRKGASILSIKESCNA 301
           +D+N  +WP++PPIPD+L V+  APEEEILS+LDVP GKMGRVIGRKG SILSIKESCNA
Sbjct: 244 NDNNYADWPSIPPIPDNLMVEGDAPEEEILSILDVPQGKMGRVIGRKGVSILSIKESCNA 303

Query: 302 EILIGGSKGPPDKVFVIGRVKQVRKAEAMIRGRMLD 337
           EI  GG+KGPPDKVF++G V+QVRKA AM+RGRM+D
Sbjct: 304 EIHFGGAKGPPDKVFILGPVRQVRKAAAMLRGRMMD 339

[Close]

BLAST of Spo14397.1 vs. UniProtKB/TrEMBL
Match: M5XCG2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008192mg PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 1.300e-154
Identity = 273/340 (80.29%), Postives = 297/340 (87.35%), Query Frame = 1


		  
Query: 1   MADDPSSHHAHVPLPSNLGG--LVSD-DAPLVPIHIVTEASQLPVEFLEPCPETKLVIGF 60
           MA  P  +  H+PL  + G   L S+   PLVPIH+VT ASQLP EFLEP  E +LVIGF
Sbjct: 1   MASLPPPYQTHLPLSPDPGEKPLNSEPQLPLVPIHVVTRASQLPAEFLEPSAERQLVIGF 60

Query: 61  DCEGVDLCRYGTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDS 120
           DCEGVDLCR+GTLCIMQLAFPDAIYLVDAI+GG MLI+ACKPALES YITKVIHDCKRDS
Sbjct: 61  DCEGVDLCRHGTLCIMQLAFPDAIYLVDAIQGGAMLIQACKPALESSYITKVIHDCKRDS 120

Query: 121 EALYFQFGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEV 180
           EALYFQFGIKL NV+DTQIAYSLIEEQEGR R+ DDYISFV LLADPRYCGISYLEKEEV
Sbjct: 121 EALYFQFGIKLNNVVDTQIAYSLIEEQEGRKRLLDDYISFVGLLADPRYCGISYLEKEEV 180

Query: 181 RVLLRQDPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKLNAHSLWNLALRGELYCRC 240
           R LLRQDP FW YRPLSE M+RAAADDVRFLLYIY+KMMEKLN  SLW LA+RG LYCRC
Sbjct: 181 RFLLRQDPNFWTYRPLSEQMVRAAADDVRFLLYIYYKMMEKLNQQSLWYLAVRGALYCRC 240

Query: 241 FCISDDNLTEWPALPPIPDDLPVDTQAPEEEILSVLDVPPGKMGRVIGRKGASILSIKES 300
           FCI+D+N  +WP LPPIPD+L VD  APEEEILSVLDVPPGKMGRVIGR+GASILSIKES
Sbjct: 241 FCINDNNFADWPPLPPIPDNLIVDGNAPEEEILSVLDVPPGKMGRVIGRRGASILSIKES 300

Query: 301 CNAEILIGGSKGPPDKVFVIGRVKQVRKAEAMIRGRMLDM 338
           CNAEILIGG KGPPDKVF+IG VKQVRKAEAM+RG+M+D+
Sbjct: 301 CNAEILIGGDKGPPDKVFIIGPVKQVRKAEAMLRGKMMDV 340

[Close]

BLAST of Spo14397.1 vs. ExPASy Swiss-Prot
Match: EXD1_HUMAN (piRNA biogenesis protein EXD1 OS=Homo sapiens GN=EXD1 PE=1 SV=4)

HSP 1 Score: 85.5 bits (210), Expect = 1.200e-15
Identity = 54/172 (31.40%), Postives = 92/172 (53.49%), Query Frame = 1


		  
Query: 54  VIGFDCEGVDLCRYGTLCIMQLAFPDAIYLVDA-IEGGDMLIEACKPALESRYITKVIHD 113
           V+    EG ++CR+G LC +Q+A    +YL D  + G        +  LE + I KVIHD
Sbjct: 100 VLSVAAEGANVCRHGKLCWLQVATNCRVYLFDIFLLGSRAFHNGLQMILEDKRILKVIHD 159

Query: 114 CKRDSEALYFQFGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVA-----LLADPRYC 173
           C+  S+ L  Q+GI L NV DTQ+A  L    E    +P+   +        L   P+Y 
Sbjct: 160 CRWLSDCLSHQYGILLNNVFDTQVADVLQFSMETGGYLPNCITTLQESLIKHLQVAPKY- 219

Query: 174 GISYLEKEEVRVLLRQDPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKL 220
            +S+LEK +   L++++P+ W  RP+S  +++  A +  +LL +   +++++
Sbjct: 220 -LSFLEKRQ--KLIQENPEVWFIRPVSPSLLKILALEATYLLPLRLALLDEM 267

[Close]

BLAST of Spo14397.1 vs. ExPASy Swiss-Prot
Match: EXD1_MOUSE (piRNA biogenesis protein EXD1 OS=Mus musculus GN=Exd1 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.500e-15
Identity = 53/162 (32.72%), Postives = 84/162 (51.85%), Query Frame = 1


		  
Query: 54  VIGFDCEGVDLCRYGTLCIMQLAFPDAIYLVDA-IEGGDMLIEACKPALESRYITKVIHD 113
           V+    EG ++CR+G LC +Q+A    +YL D  + G        +  LE + I KVIHD
Sbjct: 157 VLSVAAEGANVCRHGKLCWLQVATNSRVYLFDIFLLGSRAFNNGLQMILEDKRILKVIHD 216

Query: 114 CKRDSEALYFQFGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVA-----LLADPRYC 173
           C+  S+ L  Q+GI L NV DTQ+A  L    E    +P+   +        L   PRY 
Sbjct: 217 CRWLSDCLSHQYGIMLNNVFDTQVADVLQFSMETGGFLPNCISTLQESLIRHLKVAPRY- 276

Query: 174 GISYLEKEEVRVLLRQDPKFWKYRPLSELMIRAAADDVRFLL 210
            + +LE+ + R+  +++P+ W  RPL   +++  A +  +LL
Sbjct: 277 -LFFLEERQKRI--QENPEIWLTRPLPPSLLKILALETTYLL 314

[Close]

BLAST of Spo14397.1 vs. ExPASy Swiss-Prot
Match: EXOSX_MOUSE (Exosome component 10 OS=Mus musculus GN=Exosc10 PE=1 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 4.200e-8
Identity = 57/197 (28.93%), Postives = 87/197 (44.16%), Query Frame = 1


		  
Query: 30  PIHIVTEASQLPVEFLEPCPETKLVIGFDCEGVDLCRY------GTLCIMQLAFPDAIYL 89
           P H+V+   +L VE  E       ++G     VDL  +      G  C+MQ++     ++
Sbjct: 287 PCHLVSSLDEL-VELNEK------LLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFI 346

Query: 90  VDAIE-GGDMLIEACKPALESRYITKVIHDCKRDSEALYFQFGIKLQNVMDTQIAYSLIE 149
           VD +E   DM I     +L    I KV H    D E L   FG+ + N+ DT  A  L+ 
Sbjct: 347 VDTLELRSDMYI--LNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLN 406

Query: 150 EQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVLLRQDPKFWKYRPLSELMIRAAA 209
                 R   D++  +       YCG+   ++ ++          W+ RPL E M+  A 
Sbjct: 407 ----LARHSLDHLLRL-------YCGVESNKQYQLAD--------WRIRPLPEEMLSYAR 455

Query: 210 DDVRFLLYIYHKMMEKL 220
           DD  +LLYIY +M  +L
Sbjct: 467 DDTHYLLYIYDRMRLEL 455

[Close]

BLAST of Spo14397.1 vs. ExPASy Swiss-Prot
Match: EXOSX_HUMAN (Exosome component 10 OS=Homo sapiens GN=EXOSC10 PE=1 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 2.700e-7
Identity = 45/149 (30.20%), Postives = 67/149 (44.97%), Query Frame = 1


		  
Query: 68  GTLCIMQLAFPDAIYLVDAIE-GGDMLIEACKPALESRYITKVIHDCKRDSEALYFQFGI 127
           G  C+MQ++     +++D +E   DM I     +L    I KV H    D E L   FG+
Sbjct: 324 GLTCLMQISTRTEDFIIDTLELRSDMYI--LNESLTDPAIVKVFHGADSDIEWLQKDFGL 383

Query: 128 KLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVLLRQDPK 187
            + N+ DT  A  L+    GR  + D  +          YC +   ++ ++         
Sbjct: 384 YVVNMFDTHQAARLLNL--GRHSL-DHLLKL--------YCNVDSNKQYQLAD------- 443

Query: 188 FWKYRPLSELMIRAAADDVRFLLYIYHKM 216
            W+ RPL E M+  A DD  +LLYIY KM
Sbjct: 444 -WRIRPLPEEMLSYARDDTHYLLYIYDKM 451

[Close]

BLAST of Spo14397.1 vs. ExPASy Swiss-Prot
Match: RP6L1_ARATH (Protein RRP6-like 1 OS=Arabidopsis thaliana GN=RRP6L1 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.500e-7
Identity = 44/153 (28.76%), Postives = 71/153 (46.41%), Query Frame = 1


		  
Query: 68  GTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEALYFQFGIK 127
           G  C+MQ++     Y+VD  +  D +    +   +     KVIH   RD   L   FGI 
Sbjct: 151 GLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIY 210

Query: 128 LQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVLLRQDPKF 187
           + N+ DT  A  +++ +           S   LL    YCG++  ++ +     + D   
Sbjct: 211 VCNLFDTGQASRVLKLERN---------SLEFLLK--HYCGVAANKEYQ-----KAD--- 270

Query: 188 WKYRPLSELMIRAAADDVRFLLYIYHKMMEKLN 221
           W+ RPL ++M R A +D  +LLYIY  M  +L+
Sbjct: 271 WRIRPLPDVMKRYAREDTHYLLYIYDVMRMELH 284

[Close]

BLAST of Spo14397.1 vs. TAIR (Arabidopsis)
Match: AT2G25910.2 (3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein)

HSP 1 Score: 514.2 bits (1323), Expect = 6.000e-146
Identity = 251/341 (73.61%), Postives = 290/341 (85.04%), Query Frame = 1


		  
Query: 1   MADDPSSHHAHVPLPSNLGG---LVSDDAPLVPIHIVTEASQLPVEFLEPCPETKLVIGF 60
           MA    +  AHVP+P   GG       + P VPI+IVT+  QLP +FL P PE KLVIGF
Sbjct: 1   MASSSPTQLAHVPIPPEPGGRSPTQEANEPPVPIYIVTDPFQLPADFLNPSPEKKLVIGF 60

Query: 61  DCEGVDLCRYGTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDS 120
           DCEGVDLCR+G LCIMQ+AF +AIYLVD IEGG+++++ACKPALES YITKVIHDCKRDS
Sbjct: 61  DCEGVDLCRHGKLCIMQIAFSNAIYLVDVIEGGEVIMKACKPALESNYITKVIHDCKRDS 120

Query: 121 EALYFQFGIKLQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEV 180
           EALYFQFGI+L NV+DTQIAYSLIEEQEGR R  DDYISFV+LLADPRYCGISY EKEEV
Sbjct: 121 EALYFQFGIRLHNVVDTQIAYSLIEEQEGRRRPLDDYISFVSLLADPRYCGISYEEKEEV 180

Query: 181 RVLLRQDPKFWKYRPLSELMIRAAADDVRFLLYIYHKMMEKLNAHSLWNLALRGELYCRC 240
           RVL+RQDPKFW YRP++ELMIRAAADDVRFLLY+YHKMM KLN  SLW+LA+RG LYCRC
Sbjct: 181 RVLMRQDPKFWTYRPMTELMIRAAADDVRFLLYLYHKMMGKLNQRSLWHLAVRGALYCRC 240

Query: 241 F-CISDDNLTEWPALPPIPDDLPVDTQAPEEEILSVLDVPPGKMGRVIGRKGASILSIKE 300
             C++D +  +WP +PPIPD+L  + Q  EEEILSVLDVPPGKMGRVIGRKGASIL+IKE
Sbjct: 241 LCCMNDADFADWPTVPPIPDNLKSEDQCLEEEILSVLDVPPGKMGRVIGRKGASILAIKE 300

Query: 301 SCN-AEILIGGSKGPPDKVFVIGRVKQVRKAEAMIRGRMLD 337
           +CN AEILIGG+KGPPDK+FVIG V++VRKAEA++RGRM+D
Sbjct: 301 ACNSAEILIGGAKGPPDKIFVIGPVREVRKAEAILRGRMID 341

[Close]

BLAST of Spo14397.1 vs. TAIR (Arabidopsis)
Match: AT1G54440.2 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain)

HSP 1 Score: 57.4 bits (137), Expect = 2.000e-8
Identity = 44/153 (28.76%), Postives = 71/153 (46.41%), Query Frame = 1


		  
Query: 68  GTLCIMQLAFPDAIYLVDAIEGGDMLIEACKPALESRYITKVIHDCKRDSEALYFQFGIK 127
           G  C+MQ++     Y+VD  +  D +    +   +     KVIH   RD   L   FGI 
Sbjct: 151 GLTCLMQISTRTEDYIVDIFKLWDHIGPYLRELFKDPKKKKVIHGADRDIIWLQRDFGIY 210

Query: 128 LQNVMDTQIAYSLIEEQEGRPRVPDDYISFVALLADPRYCGISYLEKEEVRVLLRQDPKF 187
           + N+ DT  A  +++ +           S   LL    YCG++  ++ +     + D   
Sbjct: 211 VCNLFDTGQASRVLKLERN---------SLEFLLK--HYCGVAANKEYQ-----KAD--- 270

Query: 188 WKYRPLSELMIRAAADDVRFLLYIYHKMMEKLN 221
           W+ RPL ++M R A +D  +LLYIY  M  +L+
Sbjct: 271 WRIRPLPDVMKRYAREDTHYLLYIYDVMRMELH 284

The following BLAST results are available for this feature:

BLAST of Spo14397.1 vs. NCBI nr
BLAST of Spo14397.1 vs. UniProtKB/TrEMBL
BLAST of Spo14397.1 vs. ExPASy Swiss-Prot
BLAST of Spo14397.1 vs. TAIR (Arabidopsis)

BLAST of Spo14397.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902233479\|gb\|KNA23074.1\|	2.7e-196	100.	hypothetical protein SOVF_0281...	[more]
gi\|731317481\|ref\|XP_010669101.1\|	3.4e-175	89.0	PREDICTED: exosome complex exo...	[more]
gi\|590573811\|ref\|XP_007012225.1\|	4.1e-157	81.4	3'-5' exonuclease domain-conta...	[more]
gi\|1009135694\|ref\|XP_015885122.1\|	4.6e-156	77.6	PREDICTED: exonuclease 3'-5' d...	[more]
gi\|823227648\|ref\|XP_012446620.1\|	1.7e-155	79.7	PREDICTED: exosome complex exo...	[more]

BLAST of Spo14397.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RVX5_SPIOL	1.9e-196	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CW63_BETVU	2.4e-175	89.0	Uncharacterized protein OS=Bet...	[more]
A0A061GRT9_THECC	2.9e-157	81.4	3'-5' exonuclease domain-conta...	[more]
A0A0D2TDN5_GOSRA	1.2e-155	79.7	Uncharacterized protein OS=Gos...	[more]
M5XCG2_PRUPE	1.3e-154	80.2	Uncharacterized protein OS=Pru...	[more]

BLAST of Spo14397.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
EXD1_HUMAN	1.2e-15	31.4	piRNA biogenesis protein EXD1 ...	[more]
EXD1_MOUSE	3.5e-15	32.7	piRNA biogenesis protein EXD1 ...	[more]
EXOSX_MOUSE	4.2e-8	28.9	Exosome component 10 OS=Mus mu...	[more]
EXOSX_HUMAN	2.7e-7	30.2	Exosome component 10 OS=Homo s...	[more]
RP6L1_ARATH	3.5e-7	28.7	Protein RRP6-like 1 OS=Arabido...	[more]

BLAST of Spo14397.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT2G25910.2	6.0e-146	73.6	3'-5' exonuclease domain-conta...	[more]
AT1G54440.2	2.0e-8	28.7	Polynucleotidyl transferase, r...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002562	3'-5' exonuclease domain	PFAM	PF01612	DNA_pol_A_exo1	coord: 42..219 score: 7.4
IPR002562	3'-5' exonuclease domain	SMART	SM00474	35exoneu6	coord: 31..220 score: 1.7
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 267..335 score: 1.
IPR004088	K Homology domain, type 1	GENE3D	3.30.1370.10		coord: 272..334 score: 2.3
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 273..331 score: 1.
IPR004088	K Homology domain, type 1	PROFILE	PS50084	KH_TYPE_1	coord: 268..330 score: 12
IPR004088	K Homology domain, type 1	unknown	SSF54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 267..336 score: 1.9
IPR012337	Ribonuclease H-like domain	GENE3D	3.30.420.10		coord: 32..229 score: 1.7
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 26..229 score: 8.73
None	No IPR available	PANTHER	PTHR12124	POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED	coord: 12..337 score: 2.7E
None	No IPR available	PANTHER	PTHR12124:SF45	SUBFAMILY NOT NAMED	coord: 12..337 score: 2.7E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0016192	vesicle-mediated transport
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding