Spo14438.1 (mRNA)

Overview
NameSpo14438.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionHistone H3
Locationchr2 : 39995317 .. 40000673 (+)
Sequence length342
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGGAGTCAAGAAACCCCATCGTTACCGCCCTGGAACTGTTGCTCTTCGGTAATTTTCTCAATTGAAACATTTAATCATCCACATTTTCATTCTATTACTTAGAAGGGCTCATTGTTTGAATATAATTTTGATAATCAGTGAAATCCGCAAATACCAGAAGAGCACTGAGCTTTTGATCCGCAAACTCCCTTTCCAGCGTCTTGTTCGTGAAATTGCCCAAGATTTCAAGGTAAAGTCATAATTCAATTTATTAAAGTTTCGAATTAGTCGTTTTTTGAAATGTTATTGATTAGGGTTTGTGTTGTTGGAAATGAACAGACTGATCTGAGGTTCCAGAGCCACGCAGTATTGGCACTTCAGGAGGCTGCAGAAGCATACCTTGTGGGTCTCTTTGAAGACACCAACTTGTGCGCCATTCACGCTAAGAGGGTGACCATCATGCCTAAGGACATTCAATTGGCACGTCGTATTCGTGGTGAGCGTGCTTGAGAATATTGAAGATTGGAGTAGAGCAGTATTTAGAAGGGTTTTTATTATTATCAAGTGTTTGAGATACATTAATATTTTGTAGATTTGGTGTTGTTGGTGGTGTATATACCTCTAGACCAACTGGAAAATGTTTTGAAAATTGGAATACATTGCATACTTTTGATGTTTAGAGATTGTATTACTGTTTATGATATTTTAGTTGTTTCTGAAATCAATGTTTCATGTTCTGTGATGATTGGGCGATTTGATGTATTGTTTCGTTTCGGCTAACTCAACGATACGCGATTGCTTCCGAAGATATATGTAGGGTAGTTCTGGTTTGATGATGATTGTGATTCCCCCAATTTTCTGTTGATTGGGTTGTTTGATGTATTGTTTCTGTATTTGCAAAATTGTCAAAGCCTTCAATTGAGAGAAAATGTTCATCAGAATCCTTTCCTTTTGTCACTCTCACCTTTGTTTTCACAGCCAGCTTCATTTGTATATGATCTCCCTCGCCGCCTCCAATCGAATAATCTAGGTACAAGGGAAATATTCTACGGAGTACTAGTTAAAATTTGTCTAATTCCGAATTACATTTTGCATCTGCTAATTTATGTCGTACCTTTGAGTTAATATTCTACTCCATCCGAATTTAAAAAAATATTTTCCCCATTTAGAACCTTGACAATATACCTTTGAGTATGATTTACGGAGTACTTTATTAACATTTGAGTGTGAAATGTGCATATGAAAAATCACTCAATAAGGTACAGTGACATTAAAAAAAAAAATGGATATTTCATGAAATATCCCTGAGGTTTAAGTTAATTCACCAGGTACCCTCGTTGTTTCAGTAATCTACCAGGTACCCCCCTGCCGTTAAGTGGCCGTTAGAAACTTTTTTTCACCAGGTACCCTCGTAATTTATTTCACCAGGTACCCCTGAGGATTTTTAGATTTTCACCAGGTGCTCTTGTGCTTTATGGTAATTTCACCAGATACCCCTGCTCACCAACGGCTAGTTTCACCAGGTTTTGTTCTGTAACAGTTGCTGGGGGAGGGGAATATGAAGTGAAAGAGGGGGCTGTCAAATACCCTATTAAGTTTGATGCAAGGACTTGTGGTTGTGGAGTATGGCAAATATCTGGCATACCTTGCAGACATGGCCTTAGGGTTATTTACCACCAAAGACTTGAGGCTACTGATTTTGTGTCTCACTACTTCAAAGGGCAAGCATACAAGTTAACTTACTCAGAGCACATACACCCCATGCCTGACCCAACCCAATGGCCTTCTTTTGACCTTCCTATTATCCTCCCACCACCCATGAAGAGAGCATCATGTAGACCCCCTAAACTGAGAAAAAGAGGTAAACATGATCCAAAAAGGGGAAAGAGAAATAGCACTGTGAGGTGTGGTAAGTGCAAGGAGGTGGGACACAATGCAAGGACATGCAGAGGTGGGGCCACTGCAAAGCAAAAGAAGGATGCTGCTGCTGCTGCTGCTGCTGCTGCTGGTGCTTCTGGTTCTGCTGGTGCAGCTGGTTCACAGCAAGGGGGAGATCAAGGTGCTTCCAGTTCACAGCAACAACGTAATGCATCAAGTAAGGGAAAAAGGAAGCGTACTTGATTTTGTGATTTATGCATAACTTTTTGCTAAACTTATCATGTATATCTTTTGCCAATGAGAGCAAGTTTTTGTAGAGCTACACTTAAAGTTTTTGCGTGTCGGGGACACACTTTTGTAAAGCTACTTAATTCGGAAATGAAATATCATATTATTGATGAAATGTCATCATTCACTTTCTCATTACAAATATTAGAATAAAAAACATTACAATGCCAATATTGATAGTTCCATGCATTAATTTCTTTTGCTGCTTGAGTTTCTTCTTCATTTGGTGAATTTCTTCATCCAAGCTTCTGTTTTCTTCAATTTCTCCTTCCTTTGTGCTACCTCTGTTGTTTCTGATTGGCAGTGGTTGCTCAATGCTTCCCTTGCACCACTTGAAGTTGTCACATAAGTCACACTTGTAATATAGTCTTTGAGGATTTTTCATTGTTTCAGAACTTCTTATTGCAAATTTTTTCCCACATATGTTGCATGTTTTGTTTGGAACTACAACGTATGAGGATTCATACGTTGTAGAAGAAGATTGGGATTGAGAATATGAGCTCATTTGAAGGTGAGTTGGGATTTAGGGAAAATATGAGTTGGTTAAGGGGAAGAACATAAATTTGTAGTGAAGAGTTGCAGCGGCTCCCCCTTTAAATAGAGAAGGCTTACCAACGGCTAGTTTTTTTTAAAAAAAACTAGCCGTTGGTGAGCAGGGGTATCTGGTGAAATTACTATAAAGCACAAGGGCACCTGGTGAAAATCTAAAAAACCTCAGGGGTACCTGGTGAAATAAATTACGAGGGTACCTGGTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAATGGTTGAGTCATAACGGAATCTCAATTTGTAAATCATGTAAAGTGAAACTGAATAGCAATAGCTTTAGACTGTGCACGTCTGAAGTGACGGACAAACAGGAGTTGGGGTTCATGGTGGTAGCCCATGGCCTTTTCTGGGACCGGATTGATCACCGCGTTCTATTTTTTATTCAAACGTTCCTCGATATCGCAGGTCACTGAGGTTTCGGAGTCGCGCCCGTACCTCGTCTTCCTTGGGGAAGACTTTTGGTTGGACAACTCGGTCCATTGTCTATTCCAACTAAAATANGGGAAGACTTTTGGTTGGACAACTCGGTCCATTGTCTATTCCAACTAAAATAATATTATGGTTACTAAGTCTAGCTTAGTCTAGTCAAGTATGGTCGTCAAATTATTATGTTTTGTCTGTCCTTACTTATATTTATTAGTATCATGTTAGGGTTGTTAGTTTGGTAGTATCATGCTAGGATTGTTGTTGTTTTAGTATGTAGTACTCAGCTTTGCTGATTACGTGCTTTGTTTGTGTGTGTTGATCATGGCTATGCCTTATTGATCCTGTGATGACCCATCTTTGGTGAGCAGTCTCTAAGGATCAATAAGCGTTGCCCATCTACAGGTTTGAAGATGATGCATCATTGGGATCGGGATTAGAGAGCTTGTAGTTCTATTTGTTTAATTAAGTGATTTAATTTGTTAACTTGGATTTGAAATTTGTCGTACTATTCGTATTTCCTTATTTCAGTTAATTGGTTTGGACCTAATATGTAATAGATTATTTATGAACCTAAAAGTTAGTTTTATGTTTTCCGCTGCAAAATTCTGAATAAGCCGTAACGTTTTCACACGGGCGATAATACTTTGATAATTCCCTACAGTTATATTTAAAAAGGGATTACTTTAGAAAATGGGAATTGTTGGGGTGTTACAAAGTGGTATCAGAGCTAAAGGTTTTACTGACATTTCGTGTCTACCTTTTTAAATTTTAGGCACCTAACTAACTAATTAGTTACATAAAAAGAATNCACTTAACGGCAGGGTTAAGTCATGCGAGAAAATGAAACCTGAGGGGTACCTGGTAGATTACTAAAACAACGAGGGTACCTGGTGAATTAACATAAACCTCGGGGGTATTTCATGAAATATCCGAAAAAAAAAAGAATATGACCATATGAGAATCTTTTATGCATTGAGGTAGAGCTGTGAAAACAGGTTTCGGTGCAGGTTGGGTTTTGTTGGTTTGGTTTTCGGTTGGGTCATGTCGGGTTTTCTTTCCTCATTTCGGATACAAGTCGGGTTCGGGTTGAGTCATGTTCGGGTCGGGTTTAATTTCGGGTTTGGGTTTTATATAGTCGGGTTTGTAGTAGTTAATCTCGGGTTTGGGGTCAAGTTTGGATCGAAAAATTTCCGAGTCGGTTAAAATTCAGGTCGGGTTCACTCTTGAACACGGGTTAAGATTGAGTCAATAACTGATTTGGTCATCTCAAAATATTCAAGCGTAAAATATTTACTGTACATGTCGAGTCACTAACAGGTTATGTGGTAAAAATCTGGATAAGGTCATTGTCGGGTATCGAATCGGGTTCAGCTCATTGTTCAGTCGGCTCTGTTCGGTTATCAGTTATCTTTCGGTCGGGTATCGGGTCTTACAACAGCGGGTTAAAATCTGTTGTCGGTTTTTCGGATTTGGTACATGTCGAGTTTCGGGTTACCTGTTTTACCAAAAATTTCGGTCATGGTCGTTGCGGGTTCGGTCTGTTCAGGTCGGGTTTTCGGGTCGGGTCAGTTTTTGACAGCTCCACATTGAGGGAGTATTATAGAATTTTCCTTAGTTTTTTTATCACTAATTTATGCTGTTTGTATACACGGGCTATACTCCTAAGGGCTAAGGCCTTGTTCTCTTCAACTTATAGAATCTTATTTTCAGGTCCTATAAGTTCAGATAAGTCCTATAAGTTGAATAAGGTCCTA

mRNA sequence

GGAGGAGTCAAGAAACCCCATCGTTACCGCCCTGGAACTGTTGCTCTTCGTGAAATCCGCAAATACCAGAAGAGCACTGAGCTTTTGATCCGCAAACTCCCTTTCCAGCGTCTTGTTCGTGAAATTGCCCAAGATTTCAAGACTGATCTGAGGTTCCAGAGCCACGCAGTATTGGCACTTCAGGAGGCTGCAGAAGCATACCTTGTGGGTCTCTTTGAAGACACCAACTTGTGCGCCATTCACGCTAAGAGGGTGACCATCATGCCTAAGGACATTCAATTGGCACGTCGTATTCGTGGTCCTATAAGTTCAGATAAGTCCTATAAGTTGAATAAGGTCCTA

Coding sequence (CDS)

GGAGGAGTCAAGAAACCCCATCGTTACCGCCCTGGAACTGTTGCTCTTCGTGAAATCCGCAAATACCAGAAGAGCACTGAGCTTTTGATCCGCAAACTCCCTTTCCAGCGTCTTGTTCGTGAAATTGCCCAAGATTTCAAGACTGATCTGAGGTTCCAGAGCCACGCAGTATTGGCACTTCAGGAGGCTGCAGAAGCATACCTTGTGGGTCTCTTTGAAGACACCAACTTGTGCGCCATTCACGCTAAGAGGGTGACCATCATGCCTAAGGACATTCAATTGGCACGTCGTATTCGTGGTCCTATAAGTTCAGATAAGTCCTATAAGTTGAATAAGGTCCTA

Protein sequence

GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGPISSDKSYKLNKVL
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo14438Spo14438gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo14438.1Spo14438.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14438.1.exon.1Spo14438.1.exon.1exon
Spo14438.1.exon.2Spo14438.1.exon.2exon
Spo14438.1.exon.3Spo14438.1.exon.3exon
Spo14438.1.exon.4Spo14438.1.exon.4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo14438.1.CDS.1Spo14438.1.CDS.1CDS
Spo14438.1.CDS.2Spo14438.1.CDS.2CDS
Spo14438.1.CDS.3Spo14438.1.CDS.3CDS
Spo14438.1.CDS.4Spo14438.1.CDS.4CDS


Homology
[Close]
BLAST of Spo14438.1 vs. NCBI nr
Match: gi|728811857|gb|KHG00494.1| (Histone H3.3 [Gossypium arboreum])

HSP 1 Score: 199.1 bits (505), Expect = 4.100e-48
Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGPISSDKSY 109
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG   + K+Y
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGWSDAVKTY 141
[Close]
BLAST of Spo14438.1 vs. NCBI nr
Match: gi|920696473|gb|KOM39698.1| (hypothetical protein LR48_Vigan03g308000 [Vigna angularis])

HSP 1 Score: 198.4 bits (503), Expect = 6.900e-48
Identity = 102/109 (93.58%), Postives = 104/109 (95.41%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 11  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 70

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGPISSDKSYK 110
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG  S + + K
Sbjct: 71  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGEQSVEAARK 119
[Close]
BLAST of Spo14438.1 vs. NCBI nr
Match: gi|145334271|ref|NP_001078516.1| (Histone H3.3 [Arabidopsis thaliana])

HSP 1 Score: 196.8 bits (499), Expect = 2.000e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 62  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 121

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 122 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 161
[Close]
BLAST of Spo14438.1 vs. NCBI nr
Match: gi|643729023|gb|KDP36960.1| (hypothetical protein JCGZ_08251 [Jatropha curcas])

HSP 1 Score: 196.8 bits (499), Expect = 2.000e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 16  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 75

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 76  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 115
[Close]
BLAST of Spo14438.1 vs. NCBI nr
Match: gi|944265898|gb|KQL30138.1| (hypothetical protein SETIT_018284mg [Setaria italica])

HSP 1 Score: 196.8 bits (499), Expect = 2.000e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 122 GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 181

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 182 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 221
[Close]
BLAST of Spo14438.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MLX3_GOSAR (Histone H3.3 OS=Gossypium arboreum GN=F383_18206 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.800e-48
Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGPISSDKSY 109
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG   + K+Y
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGWSDAVKTY 141
[Close]
BLAST of Spo14438.1 vs. UniProtKB/TrEMBL
Match: A0A0L9UAB0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g308000 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 4.800e-48
Identity = 102/109 (93.58%), Postives = 104/109 (95.41%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 11  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 70

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGPISSDKSYK 110
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG  S + + K
Sbjct: 71  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGEQSVEAARK 119
[Close]
BLAST of Spo14438.1 vs. UniProtKB/TrEMBL
Match: A0A0V0YQI4_9BILA (Histone H3.3 OS=Trichinella patagoniensis GN=T12_14535 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.400e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 5   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 64

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 65  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 104
[Close]
BLAST of Spo14438.1 vs. UniProtKB/TrEMBL
Match: W5AUU5_WHEAT (Histone H3 OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.400e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
[Close]
BLAST of Spo14438.1 vs. UniProtKB/TrEMBL
Match: A0A0B2EVW9_9BACL (Uncharacterized protein OS=Paenibacillus sp. IHB B 3415 GN=QW71_36435 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.400e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
[Close]
BLAST of Spo14438.1 vs. ExPASy Swiss-Prot
Match: H33_ORYSI (Histone H3.3 OS=Oryza sativa subsp. indica GN=OsI_011536 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.300e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
[Close]
BLAST of Spo14438.1 vs. ExPASy Swiss-Prot
Match: H33_ORYSJ (Histone H3.3 OS=Oryza sativa subsp. japonica GN=H3 PE=1 SV=2)

HSP 1 Score: 196.8 bits (499), Expect = 1.300e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
[Close]
BLAST of Spo14438.1 vs. ExPASy Swiss-Prot
Match: H33_GOSHI (Histone H3.3 OS=Gossypium hirsutum GN=HIS3 PE=2 SV=3)

HSP 1 Score: 196.8 bits (499), Expect = 1.300e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
[Close]
BLAST of Spo14438.1 vs. ExPASy Swiss-Prot
Match: H33_ARATH (Histone H3.3 OS=Arabidopsis thaliana GN=HTR4 PE=1 SV=2)

HSP 1 Score: 196.8 bits (499), Expect = 1.300e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
[Close]
BLAST of Spo14438.1 vs. ExPASy Swiss-Prot
Match: H33_LOLMU (Histone H3.3 OS=Lolium multiflorum GN=RH3 PE=2 SV=3)

HSP 1 Score: 196.8 bits (499), Expect = 1.300e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
[Close]
BLAST of Spo14438.1 vs. TAIR (Arabidopsis)
Match: AT4G40040.1 (Histone superfamily protein)

HSP 1 Score: 196.8 bits (499), Expect = 7.100e-51
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
[Close]
BLAST of Spo14438.1 vs. TAIR (Arabidopsis)
Match: AT4G40030.2 (Histone superfamily protein)

HSP 1 Score: 196.8 bits (499), Expect = 7.100e-51
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 62  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 121

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 122 QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 161
[Close]
BLAST of Spo14438.1 vs. TAIR (Arabidopsis)
Match: AT5G10980.1 (Histone superfamily protein)

HSP 1 Score: 196.8 bits (499), Expect = 7.100e-51
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
[Close]
BLAST of Spo14438.1 vs. TAIR (Arabidopsis)
Match: AT1G75600.1 (Histone superfamily protein)

HSP 1 Score: 195.3 bits (495), Expect = 2.100e-50
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQD+KTDLRFQSHAVLAL
Sbjct: 34  GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDYKTDLRFQSHAVLAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRG 133
[Close]
BLAST of Spo14438.1 vs. TAIR (Arabidopsis)
Match: AT1G09200.1 (Histone superfamily protein)

HSP 1 Score: 189.9 bits (481), Expect = 8.700e-49
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 1 

		  

Query: 1   GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLAL 60
           GGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV AL
Sbjct: 34  GGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAAL 93

Query: 61  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 101
           QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 94  QEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
The following BLAST results are available for this feature:
BLAST of Spo14438.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|728811857|gb|KHG00494.1|4.1e-4894.4Histone H3.3 [Gossypium arbore... [more]
gi|920696473|gb|KOM39698.1|6.9e-4893.5hypothetical protein LR48_Viga... [more]
gi|145334271|ref|NP_001078516.1|2.0e-47100.Histone H3.3 [Arabidopsis thal... [more]
gi|643729023|gb|KDP36960.1|2.0e-47100.hypothetical protein JCGZ_0825... [more]
gi|944265898|gb|KQL30138.1|2.0e-47100.hypothetical protein SETIT_018... [more]
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BLAST of Spo14438.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0B0MLX3_GOSAR2.8e-4894.4Histone H3.3 OS=Gossypium arbo... [more]
A0A0L9UAB0_PHAAN4.8e-4893.5Uncharacterized protein OS=Pha... [more]
A0A0V0YQI4_9BILA1.4e-47100.Histone H3.3 OS=Trichinella pa... [more]
W5AUU5_WHEAT1.4e-47100.Histone H3 OS=Triticum aestivu... [more]
A0A0B2EVW9_9BACL1.4e-47100.Uncharacterized protein OS=Pae... [more]
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BLAST of Spo14438.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
H33_ORYSI1.3e-49100.Histone H3.3 OS=Oryza sativa s... [more]
H33_ORYSJ1.3e-49100.Histone H3.3 OS=Oryza sativa s... [more]
H33_GOSHI1.3e-49100.Histone H3.3 OS=Gossypium hirs... [more]
H33_ARATH1.3e-49100.Histone H3.3 OS=Arabidopsis th... [more]
H33_LOLMU1.3e-49100.Histone H3.3 OS=Lolium multifl... [more]
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BLAST of Spo14438.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G40040.17.1e-51100.Histone superfamily protein[more]
AT4G40030.27.1e-51100.Histone superfamily protein[more]
AT5G10980.17.1e-51100.Histone superfamily protein[more]
AT1G75600.12.1e-5098.0Histone superfamily protein[more]
AT1G09200.18.7e-4997.0Histone superfamily protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 1..22
score: 8.3E-61coord: 25..42
score: 8.3E-61coord: 65..81
score: 8.3E-61coord: 81..102
score: 8.3E-61coord: 47..65
score: 8.3
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 1..100
score: 4.3E
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 1..103
score: 2.2
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 34..42
scor
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 4..99
score: 1.0
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..101
score: 1.8
IPR009072Histone-foldunknownSSF47113Histone-foldcoord: 1..101
score: 6.77

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006007 glucose catabolic process
biological_process GO:0006334 nucleosome assembly
biological_process GO:0006605 protein targeting
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity